TCONS_00065903 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065903
Unique NameTCONS_00065903
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065903 ID=TCONS_00065903|Name=TCONS_00065903|organism=Clytia hemisphaerica|type=transcript|length=3119bp
GACAGTGTTCAGTTATAAAAGGAGAGACAACCTGTGCAATTTTGAACATT
TGTATAAAGAGAAGCGAGGAGAAAGTACTGGCGTTACTATaaaatGTCTA
GACCAAACTCAACAGTACTTCATCACGCAATAGCAACGGGCGATTTAGAG
ACCGTTCAAAGCCTCTTAAAACAAGGTGTTGTGGACGCTGACACGAGACT
ACAGGTTGACGAAGAGATTCTAGAGACGGCAAGTCGTAAAAGTTACACGT
CCATCCGAAGCTATCGACAACAAAGTATGGCTAACGAAAACATTGCCGAA
GAAAATGAAAGCGAACTCACAACAATTGATGACCAGGAGGAAGAGAACAA
ATCTAGTGAAACTGGAAATCATGATAACACATCCAGCAGTACATCCAGTG
AACTTGAAACTGACGAATTTAAATCCAGTGAACTGAGAAGCGAGAATATT
GAATCCACTGAAATAGATTTGGAGTTTAAAACGGCATCCATTGAAATTGA
CGATGAAGAAAAAGacagtgaaaatgaaattgaaaaaattatggAAGAAT
GccaacacgaggctgaaatcgaaaacGTAGTTCCAGAAGAAGAGACCCCT
ATTGAAGATAGATACCTTAAAGCACAACCCATTGTGGGTATATCTACACC
TCAAGACGAGGCTGAAATAATAGTCCAAGATGATTTGGTAGAAGACCGAC
TGCAGCCTGTGCTCCAACGATTGCGAGAGCCAGACATGGAAAGCTGTCAA
AGCGGCTCATCGACACCCTTATTGAACAATAACAGAGGATCACTCGCCGA
TGTGATTGACTTGAAACTGAGAGACGATAATGAGGGTTTGTTTGAGCGAG
CGCCTTCGATGAGAGTAAATCCGATGAGTGAAGAAGGAGGTGCACCAAAG
AAGTTGATTCCAAGGTTGAAAAGGAAGATCTCGTTGAAGTTCAACAAGAA
ACCAAAAAGAGACCTCTTggatgaagatgatgatgacGACTTGATTTATG
AGAATCTGGTCAAAACAAAGAACGTCGATGACGCACAGcTTGACGAGAAT
TTCGAAGGTGTGGCTTTCTTCGAAGCAGTCCGTGACGGTATGGATATGAT
AGTCCAAACATTGTTGGAAACCAGCGATAATTACCAACTCAACATGTTGG
ATGAGAACGGATTCACACCGGCAATGAATGCCGCATGGCACGGACAAGCA
GACTGCTTACAAATCTTAATCAAGCACGGTGCGAATACAGACCTCCGAAC
GGCTACCGGCTGTACCGCAGCACATTTTGCCGCCGGACAAGGTAATGCAG
AATGCCTTCAACTCCTGATCGACGATGATAAAGATCAGATAGATATTAAA
ACAAAATTCGGAGCAACGCCCTTGATTTTATCCGCCAAGGGCGGCCATAA
CGAATGTATGGAGATTCTCCTTGATGCAGGTGCGGATGCAAACGTTCAGT
ACCGGGGAAAACAGAATGCGGTACTGTTCGCAGCCGGAAACGGACATTAT
GAATGTCTCGAAACACTAATCGAGCATGAAGTTAATCTGAATCAAACTAA
TTCCCAAAAAGTAACGCCCTTAATGAGGGCGGTCCAACAAGGTCATAATA
CGTGTGTGGTGTTACTTACCGATAAGGGCGCCGATATTAATCTGCAAGAT
GCGATCGGGCGGTCCGCCCTACATTTCGCAGTCGAATATAACAACTCGAA
GGGACTTNATGCGATCGGGCGGTCCGCCCTACATTTCGCAGTCGAACATA
ACAACTCGAAGGGACTAAAATTGTTGTTACAACAGGGTGCAAATGTGGAT
TTAAAAACGAAAGGTGGTTCGAAGCCGCTCGATTATGCTGAGCGTTTTCA
AAACACTCGCCTTGGAGAAATGATTGAAAATCATATTAACAAGCTCAGGG
AAGAAGtcgaaaaggaaaaagaaattgaagtaCAAAAACAAATCGTCGAA
GAGAAAGAGAACAAAGTTTCCTGTCTAAGTTTCAAACATATATTTAGGCG
CCGAAGTCGCAAAAATTCGGACGTTCAAAAAGCTGTATAACAAATAGAGG
GGACCAATCTATATAGTATAGCAATATTGCAACGTAATATCTTGTATGTG
ATGGAAGGAGATTTGCTTTCTGTGGCCCTTATGAGGGAAAAATGTTCTCG
AGATGGGCACCAATAGGCGTTGAACCGAAACATCAAGCTGCTTTGATAAA
CACAAATCTCACAAACAAAAAAGATAGTAAGACCATGTTccgacgttacg
gttccgttccgctccgaaacgaaacagTTCCGAAACAAGTTTGAACATcg
aaattcgaaacgtcaaaaagaagactttacacagtaaaacagatcgaaac
ggtttcacTCCACtaatcggaacggaactgctccattttcttgctccgaa
acgttcctaaactaatatgaacactctcgatccgtaacgaaaattaCACt
agagcgaaacggaaccgtaatGGCTGAACAGGGTCTAAGCAATCAAATAT
TGAAAAGATAGTCCTTTGAAATTGGCAATGATGTAAAAAAGGAGAGAATC
GTTTTCTGATGATATCTTATCATAAACTTGAGAGCACTTGTAGTAAAGAA
AACAAGGTGAGCGGATGTTCGGCGTCGAAAGATAAACAACAAACACTGTG
ATAATCGTTCCATAAAAGAGGGTGATACCTTATCATATGCCAAAGAACAC
ATTGAATCCTAATATGAGATTGAATTACCTCATAACTCGTGTATATAATA
CCAAACATTGAATAATATGGATATAACAGGATCTTTGCTATGTTGTAACG
CTCTGAACATTAGAGTAGTTTGTAGTGATATAATACGGATAAAATAAGAT
CTTTGCTATGTTGTAACGCTCTGAACATTAGAGTAGTTGTAGTGGCATCT
TAACAACTCGTTACTAGGCTATTTTGCGAATAATTTTAATTAAACTTTTA
TTATGGAGGGCTCCAATTCGTTTTTAAAAGAGCGAAATTATTAccttata
ttatattatatgtGTATATTCTTAATTCTATGAaattaatcttaaaattt
ctagtatccaagaagaaaaaaatctcatggGCCCCGGCGACCAGTTTGAA
GTAAGGGGGGAAATATTGG
Run BLAST on NCBI

transcript from alignment at scaffold_448:320647..335960+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065903 ID=TCONS_00065903|Name=TCONS_00065903|organism=Clytia hemisphaerica|type=transcript|length=15314bp|location=Sequence derived from alignment at scaffold_448:320647..335960+ (Clytia hemisphaerica)
GACAGTGTTCAGTTATAAAAGGAGAGACAACCTGTGCAATTTTGAACATT
TGTATAAAGAGAAGCGAGGAGAAAGTACTGGCGTTACTATGTAAgttgat
aatattttttttttaaagggaaagatacaagatttggaaaactttgaaTT
GGGTGGGTACCCCTCCTATTGGGTTATAAACAGTTAGCCTAACCTGTGTG
GTTTGTTCGCCCgtatttttttgtgataaacaaagaggaatgaatccata
cagtcactttcggtcgtgGTTGTGAACGGCAAAATTTGTCGtcctttatg
aaatttgtcgttctttttgtctatttttagtaatacagGATTTGTTAGAT
AAAACTCCTCAATTTTGTTAATATATATTGTAATATATATTTTGGTAATA
TCGAGGTATTTAACAGCAGAAGTATTAATCGGTCTTAATTTGTGATTACA
TTTTTGAGACtcagtgttcttataaaagtatTCTTATAACAAATGAGTGT
AATTATTTTAAGACCTTGTCAAAGTCGTTCAAGTCTCAAACCTTTGAAGA
GAAcaaccctgtgtcacagactcaCTGGGACCCCAACCACACTGGAAAGT
TTGGCAACAATTTCGTCTCCGGTGGGAACCGGAGTAATTATAAACCCTGT
AATTTAGCCCCACTgggatgactttgatttcatccctactcgaaattcca
tgtttaaaaattgcactccaaaaccatcccagcTGGATTTttaaaccttg
gaacaatatgaTTTCTATCACCCTTGGGATttaaataggaatttttatcc
ccactgaggaaaacagcagggctgtgagacaggggtgaaagAGATAAATA
CTCAAGGACTCAAACCGAGAGAAATAGTTGTTGCTAATTTTATTCTATTA
TAATCTTTCAAAGTTAGATTTTAGGAAATATGCTTGTGTACACCACATAT
GGTAGGTAAAGAGGGTGCacacattttaaagctttagtttttttaaataa
gagtgatatcgtttgcttattcattatttttaatttacgaGCTTTTTCTC
ATTGgtttgacacggatgtggagcaagattggtccgaaaatatattatat
cagcataatttaacaataggtagacactgtcctgatatgaaatgtgtgtc
tgatatgaaacgggaacacttatgtaaaaatagacTTCAGCCCAAGTCAG
AACTAACAATAAAGTGAACTGAAAAACCGAAATGCTAATTATGAACCACG
AAACCGCAAAAAGAAGTTCCCTTTTTTCAAAGCTGAAGCAACTGCCGTTC
AAAGCTGACTTCggactacatgttttttataagagccttCGGATcttcta
aatttttttgagttacatgcctgaaaatgttcttaaaatgttcttaaaat
gttcttaaaatgttcttaaaatgttcttaaaatgttcttaaaatgttctt
atcttcaCTATTTTGACAGTACCTTTCTGCGATATTATAAGAAATTAGGT
GTTCCACGAagcttaaaaaatgttcttaaatgtgtTTGACATACAATCGA
ACCTTTATGTTCtcatattttgttcttataaaaaacgtatatttgTTGTG
TACAAAGAAAGTATGGGGAGATGCAAGAGACGAAGTGAGTCAAAAAGTGT
TGATTTTAAAATGGTATTATGAAGAGATTACAAATTGTGAGGGTGATATT
TGTTGACTGAGAAATCGTCATCAATCGCatcaataataaaataaatacaT
TTTCTATTTCTTATTAAAAAGATTACCGAGAAATGATTTCAGACTATTAC
TCGCTTTAGACTAGATTCTCTTAAAGTATCGTCTCCATAAACGCAAACAC
TCTCAAGTTAACCCTATTCGTCCTAGGAGGGGGGCTGTTTCTATTCGGAG
GTCAGATTactggtaatagctcctgaaataatagagcttttgccatgaaa
ttttctgtaaattcctaacttttatttagcttcaaaataaataaaaaaat
tgaaacctaAAAATCTTCACACCTTGTGCATGATAACATTTCTGACAGta
taaggtgtcacaaaaattgacacttttccaataaaaatttatttttaatg
tcaaatatatcgtttaaaccgtaatttattgaatatttaggataaaataa
gcattttagactcaggcaacttttttctaaagcctttgttagagtacaat
agctatttaaaagaacaaaggaaattctcggttttgctcactttgggcat
gatgagtgacgtcatcataaagattttttgttaaaagttgcCTTATggga
caaggatcttgtgtgccaaatttcatccaaaaagacccactagatcaaaa
gttatggggtGGTAcgggaaaagcccccccccccctttttcccccccccc
cccaaccccggggggggggggggaaaagcccccccccccccattttttcc
cccccccccccaaccccggggggggggggggaaaagccccccccccccta
gttttgaaccgcccctaaaagcctaggttgaatagggttaaggagATTTC
GAGTATGGAGTAAGGCATTGTTAATTAAAGCTTGTCCGAGGTAAGGAGAG
AATGCCTGAATCATCTTATATCTGTCATATTTGAACCCTTATAAATGGAG
TCGAGTTCCTTATACGGTTTGATAGAGGCCTGCGATTCAGAGTAGACTCC
TTATAATTCAAACTCACTATAATCCGAACAAATTTACGTTTCGTGCGAGA
GTTCGAGCTGCAGAGATCGTAAATTTGTTTGTCTCTCAGTATCTTAAAAG
TTTTTGTATGAAAGCCTCTTTTGAGAATCGCATTTCTAAAAGTAAATCAT
GTCTTTATCAGACATGTCATAATCTCTTTGTCAAACATTGAGGAGGGGTT
GAAGTTTGTACCTTTCTAAAAAGGAACCATCTATGACGTAATGTTTGTTT
ACGTTGTAATGATTAACCTTTCGCAGTTTTAGCTAGTTAGTGACAAATAC
ATGAGTTTTaataattaaaacaaaatttttttcttgggctttcttcattt
cttgtGGTATGCTTGCTGTCTTGAATGTGGATTTCTTGAGATCAGCGTAA
CCTCTACTTTAAACTCAGAGACCTTTCATAATTTCAGCTATAGAGtgtca
aataatattttttcacgAGCCTATTCTTTAAATTCTTTCTTATAAATTTG
GTCTCTTGTCTTAAATGTGGATTTCTGGAGTAAGCGGCATCTCTATTTTT
GGCTTAGAGGCCTTTAGAGCTTTCACACTTTCAGCTACAGAGTGACAAAT
AAGAGATTTAAAATATCGTTTTCAGTTTTCTTTGATATTTCTATAGGTTA
TAGGTATGTTGTCTTGAGTTTGGACTTCTGGAGACAGCGAAACATCTACC
TTTGGCTTAGAGGCCTTTAGAGCTTCCACAGTTTCAGCTAAAGAGTGACA
ATTCGAttgtttttagcttttttcaaatttttcctgGTCTGTTGAAAGGA
GAAAGTGAAACCTATGCTTTAGAGTTTTGGAATTTCCGTAGAGTTTTTTT
CTTATCGATTCTAACTGGAGATGGTAAACGTTCGGTTTATTTAACATACA
GTCATGcttgaatgaaaaatatttttacgaaATCAAACCATGTGTCTATC
AGATGTTTCAGAGGGTACAATATAATGCTGGAACTATTTATAAAATTTCC
CCCTTTGTTTGACGATTTCGAGGAGCCAGTTCATACTAACAAAGTCTTTG
TGCGGCAGCTTCATTTTTAAAACTACAAATAGAGGATAGTAACTAATCTC
CATCTTAGAGGTCATCCTTGACTAGAAAAATTTAAGAGCTCTTGCTGCCT
GTGTCAGTCTGGTTGGTGAAGTGAAATTTATGTTTATAAATGTTAGAgcg
tccaaatttttgaagccttctgacgttcttaacttttagGGTTTCAagcc
caaaaatgtttttaacttcaCCATTTTACGAGTATTGAATCCAGCccatt
gtttgtttttaaaccGAATATTTTTAGAGATCTGTCAATGAATTTcactt
tcaatctggcgtttgtgttaAAGCCAGAAGTTTGGGATGGCacataagtg
gcttcatttcccatccaagaatTTCGAATCTAACCCATTCAGGGCagaac
acgttttttttataagaatactttatacgaatattcatgatgaaattggc
caaaaaactaagaatatgctatgAATTacatcatcatggaatttgaCAAC
TGAACCTAAAAATGCCAAATCTTTGCTCgaggtatgtattacatgctAGA
ATTTGGTTACGTTGGATCCTAACATAGGAATAtaataataagaatatttt
agggcGATTTTCCCCAATCCATCATGAATtgaaaacaccattcttataaa
aagaaaagcgtaTAGAAGGTTGGAAAGCTCCCAGGAGAAGAGTGAGGGGG
ATTAGTGACAGCTAACGTACCAGTCACACGCGATCGAAAGGGgatcaaaa
aaaagaaagaaaaggcgaaaattaatcaacatttcattgtaaaaaaatga
atttatatATCATGAAAACGTTtctaattttggattttttctgaGAAGGA
AGGACACAGGTTTTTTGAATGTGTGTGTGAGTCAACCAAGCCATAGATAT
TGAATTGGGGAatcagtttttgattttttgaattttttgaccgTTTAGTG
ATAAAAAGATTCAAGATGGTTGTTGTAATAAGGTAAGAAAATTGGATCCA
TTGAAATAAACGAAGATATGATTTTAAATGTGACTTCTTTATAGGCACCA
CTAGCGGAAACAAAATAGACTCAATTTATAACAGTTATATTAAATTGGct
taaatatgatttttaatactgtaaatttgaaaatcttgacAAACTCGCGT
TTTTTTTGTGGACTTTAAAACCACCAGAAAAAATAGTATTCTGTCTGCAT
ATGTTTTGAACAAAGATCGAAAACATGAGAATCCTCAATAGTGGTCAAAT
TGGTATAATGTCCCATTTAACAAACAATCTACGACAATTGTTGATGAGTT
TGAACTATTGCCAATATTTTGAGCcacttaaaaatcaaaacaaatgctaT
AAAATGGTACCTTatgacaaaatcaaaacaaaaaaagaggCAGCGGCCAC
TCAAATTAGAAATTGTTGATATTAGGCCAGCTCTTGCGTTGCGACGAAAA
ACACGTCAGCAGAAAATCGTCAATTGACGTCAGAAACGCCCTTTTGTTTA
GACGTTctatattttaaattatttccTTTGTAAGTGATGaattgaattgt
tttgtttcgACATCAGAACTTTTGAGTTTTGGTTTTCATGGATTGAAATA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTTTG
GGCCTAAATccgcaaaaaccgcaaaatttagttcccgcaaaaattagttc
ccttaaggtatatgaTTTTAGCAGATATATTGAATCTTTTAATTTGTGAC
AAAATCGGAAATGTAAGAGTTTAAgaagaataaaataaatttagctTCGG
GTAAGAAAATGACACATATAGAGTGATTGAGGTCAGGTTGCTTAAATTTA
ATCTAACATAAATGGAAAGTTTATAAATCTTATTGTTAGCTGTTCGTTGA
TTGAAATGTTCGttgattgaaataatttttgtaagaATAATCTCATAAGA
ACAGCTAAGACTAGACAGACACAAACACAAATAGTTAGAGATTTAAATAG
TCGAATACCTAAGTAAATAACTCTTGCCAGTAAAACCTAGGAAGCGAGTT
AGGTCATACtgtcaaaaaattataaaagacGAACTTCCAAACTAGCTAAA
AATTATGACATAGTTCTTAGGGAAAACTTtgtttaggggtcaattttcat
TACATTGTCAACATTTAATCACAAACAGATAAACACGAACATAAAAAAGG
AGATTTTTGACAGAATTGTCAGGACTGTGAAAGGGACACGTAAAAAATAC
CTAAATGCGAGGAGAAATGGTAGAGGAGCTAATTTAGCCGGCATTAACAA
CAAGTAATTGTTTATACGATTCTTTTGATTTAACAGCAGTTTAAGAACAG
TTTAGAGGTCTAGAATGACAAAAGGGGCTAAAAGTAGTGAAAATCAGGTA
TAAAGGCAAACCTACCATCTCTAGTTCttttcctaaaaataagaacagga
taggGTCAATTTGAGGTTTAGAGGGCCAAAAGAGTAAGACCTGAGCCTCG
ACGTACacgatgaaaatattttaaaacaaaaaaaggtCACATAATTAAGT
CAAATGACTCTTACGAAGGCTCCCTATCTGAGGCAAGCTTAAAAGGAAGG
ATTGTCAATTTACTGGTAATATAACAAAATGTTTTAATCTCTcttctttt
gatattttgttacCTCATAATGGAAAAAAcacttgaaaaatgaaagttta
tCAAAATGGTTTTTTCATGGCTTGGTTTACATTAGGGAAAATCTAACTCT
ATAAAATGATTTAACAAAAGCATCTATAAAATTATGGAAACAGAAGGACT
CATCTCCAGAGAGATATTTACGGCTCTTAAAGGTAAGGGtttttcaagaa
agaaaaagcaCCGTGAAAGCACCGTAAAAGTAGCGTTTTATAGTAAATTA
GATCAAATAAACTTGTGCCGCTTAAAGAAACTTTTGCTTCAAAAAGGTGA
GAGGCCTGAACCACAgtcctcgttttcggggattggcgggttcaacctaa
atttttcagaattgcGCGGAAGGGTATTCTATAATTCCTCTCTaatggga
aattggcccactCCTTTTAGAGCTTTAACGTAAACATTCATCAACTTGGC
ATCGGAATACTAGATAATCTGTAATTCAGACTAAATACCGCAGCATGCTA
GAAAAGAAAGTGATAACCACAATGTCACAAGGTTACTTACAAACttaaat
gcctcgaaaatgaactaaaacttttatttcaaaaacatacaaaattttgt
tgattttaaaacCCTATTTACACTAAAGAGGTATTGACGCGATGTGAATC
AGCAAACAATAGAAGCCTCTTACCCAATCggaaatagttctttttatgtC
ATCTTTGTTTATCCAACTCGAGTGGTCATTGCACAAAAGAACATTCTATA
GAAATTAATGTCTTGTGAACTGATATTTTCTCgcctcattttgaaattta
tgtTTTCGTTAGTCGGACGGTTGGTTGTTTTGCGATAGTAATTTTGACAA
GATCACTTTTTGTACTAAAGGtgttgtaatttttttgttcgGTGTATAAA
ACGAGTCAAAAATTTACCATTCTGTTTTAGGTCTAATAGCATTTAAACTG
CTTgtaactttggatttttatcggaTAGGTATTATTGATTGGTTAGCTTT
GTTGCTTCATGCTGGATTATGATCTTACATTgaatttttatctgttttcg
TAAACGTTGTCTGTCGTCCGAAAGTCGctttatacagttgacgctctcaa
aatcgattttcaaggggattGGATTTTCATCTCTAATAGAAGAGCGTCCT
TtacgagagtttcttgttgacggtgactttcaaaaTTATCGAATTATGGA
ATGTATGGAATagtaaaaagtcaaattttagaaaacctTTAACTGTAGTT
TCTTGTTTTCGATAATATTCAAAGATGATGTCATTTTTATCGCATATCTA
CCACAATTTGAATTTACcatgaaatattttgctattttttcttgTCTAAC
TTCATTCAAacgtaaaaaaaataatcaaatttcagaaagtTTACGGTAAT
CTTTTGAGGAATTACTAATTCTTAGACAAACGCAAAGAGTCAGTTTCAGA
TCAAAAGATTCAACTGATGAAGCTTTATATTCCATGATTTTGGCAAGTTT
TGAAAGAGTTGTAGTTCGTGCACTGGCATTGAATTTTGATATGTTAGTCG
ACATTCAGTCGAGTCAGTAGGTCAAGATAATGAGAGGGTTAGGTGGCGAG
AAATGCCTTTCACAGCAAAGAATCGTTGTATTTTATAAAGTTCAATTTTC
ATGAACCTATCCGAGAAAAGCTAGAGTGTTTTAGAGGACATCATTCAACG
Tctctcctaccatttgcttacacagcatttttaaaacaaaagaaagaaca
tcGTTCTCCCATTTCACAGCACAAAGTTAAAGGGCATTCTCTTTAAAAGA
CATCATTTAACGTATCTCCtatcatttgcttacacagcatttttaaaaca
aaagaaagaacatcGTTCTCCCATTTCACAGCACAAAGTTAAAGGGCATT
CTCTTTAAAAGACATCATTTAACGTATCTCCtatcatttgcttacacagc
atttttaaaacaaaagaaagaacatcGTTCTCCCATTTCACAGCACAAAG
TTAAAGGGCATTCTCTTTAAAAGACATCATTTAACGTATCTCCtatcatt
tgcttacacagcatttttaaaacaaaagaaagaacattgTTCTCCCATTT
CACAGCACAAAGTTAAAGGGCATTCTCTTCAAAAGACATCATTTAacgta
tctcctaccatttgcttacacagcatttttaaaacaaaagaaagaacatt
gTTCTCACATTTCACAGCACAAAGTTAAAGGGCATTCTCTTCAAAAGACA
TCATTTAacgtatctcctaccatttgcttacacagcatttttaaaacaaa
agaaagaacattgTTCTCACATTTCACAGCACAAAGTTAAAGGGCATTCT
CTTCAAAAGACATCATTTAacgtatctcctaccatttgcttacacagcat
ttttaaaacaaaagaaagaacattgTTCTCACATTTCACAGCACAAAGTT
AAAGGGCATTCTCTTCAAAAGACATCATTCAACGTctctcctaccatttg
cttacacagcattttttaaacaaaagaaagaataaCTTTATCCACTTCCC
GCACCACTCGCATAAATTTTGAGGAATTCTGCTTTATCAGTACATGGGCC
TCagcgagccattttgagtgagggggccaacattttggaaaacaatgtcg
gccaccatggttgggcaacgaagcaaatttttcactttttacaccctcaa
aacactttaaaacgatatctaattggggagaatagtagtttttgtggttt
gatttgatctcaaaccagcttaaaatagtaactcttaaaaacgtatgaca
tggtCTACCAAAAAATGGAGGGGCCATGGACCCCCCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcccccccccccccgttg
acGGAGCCCATGCAGTATAAAAGGTTTGCCTCTAATATGCATCCATCTTT
AACTTATTTTGCTTGTTTTCCGCACACGtcgaaacattacgtcattaaaa
TCATGAATTGATGCTAGATCCTATCTATCAGACAGGGCCTTTTTAATGAA
GGAACCAaaacagtacacgttttttataagaacaaactatataagaacat
aaggcttcgatagccaaaatgttaagaacaagttaagaatattttaaggc
tttgcagacatCGACTTTCATAGGAAaatatggacaaaaatactcaaaaa
atggcgaaaataagaacatgttaagaacatttttaggctttaaaattaaa
aagttaagaacattccaaggcttcaaaaattttggatgtttttataaaaa
aacgagtAGTTTTCGTTCTCAAACAGGTTTAAACTCCTCCTCTTACGAAG
CCGTGAGAGATCCGAAGACTGGCTCTGTTTGAAGACGGATTAGATGAGAC
TTTAAATAGTATTTAATTAGGGAAGTTTGAGTGTATATAAAGTATAAGTG
TCAGTAGGTAGTCAAACATCAAGTCAACAGAATGACTATTATCCTCAGTA
TAGATAAATATTGAATATATTTTGGTCCAAAGCAatagatatttttttca
atattttctcaaGGGATACGAGTGATGAGTTAAAGAAATGGTCTTGTCAA
TAAATATCTCGTAAGCCTCATTTGACCAAATCATCCATGCATACCTAAGA
GAAATACCAAGAACCTGAAATCCCAAATCTCCTCATTTCTACTTTCtcat
tatttcttcttttagaaaatGTCTAGACCAAACTCAACAGTACTTCATCA
CGCAATAGCAACGGGCGATTTAGAGACCGTTCAAAGCCTCTTAAAACAAG
GTGTTGTGGACGCTGACACGAGACTACAGGTAAAcccgatttccccgatt
ttcacTTGATTTCACCGATTAAAGAGATCGTTATAGTTTTGTAAAGTCAT
CCTCCACATGTGGAAAACTGTCATTATTTGAAGATGCGATAGCTAACTGA
AAACCTATATCATCTTAtccgaatctttaaaaaataagcCTCTCAAACTT
TCGGTGTCTCCTGGCCAACTATTTCTGTAATTTGATTATATGACTAACAA
ACTCAAAATAAGTTTTCTCGCTTTCACTGTTCAGTGTTCGATAGAGTACA
CTTCGATCcctaatttaaaatatttgatatCTGTGATAATAAAAGGTTGT
ACAGGTATGATTTGgggaaaaatttgaataattcaACCCGTTGTTTCTTT
ATCTTAGGTTGACGAAGAGATTCTAGAGACGGCAAGTCGTAAAAGTTACA
CGTCCATCCGAAGCTATCGACAACAAAGTATGGCTAACGAAAACATTGCC
GAAGAAAATGAAAGCGAACTCACAACAATTGATGACCAGGAGGAAGAGAA
CAAATCTAGTGAAACTGGAAATCATGATAACACATCCAGCAGTACATCCA
GTGAACTTGAAACTGACGAATTTAAATCCAGTGAACTGAGAAGCGAGAAT
ATTGAATCCACTGAAATAGATTTGGAGTTTAAAACGGCATCCATTGAAAT
TGACGATGAAGAAAAAGacagtgaaaatgaaattgaaaaaattatggAAG
AATGccaacacgaggctgaaatcgaaaacGTAGTTCCAGAAGAAGAGACC
CCTATTGAAGATAGATACCTTAAAGCACAACCCATTGTGGGTATATCTAC
ACCTCAAGACGAGGCTGAAATAATAGTCCAAGATGATTTGGTAGAAGACC
GACTGCAGCCTGTGCTCCAACGATTGCGAGAGCCAGACATGGAAAGCTGT
CAAAGCGGCTCATCGACACCCTTATTGAACAATAACAGAGGATCACTCGC
CGATGTGATTGACTTGAAACTGAGAGACGATAATGAGGGTTTGTTTGAGC
GAGCGCCTTCGATGAGAGTAAATCCGATGAGTGAAGAAGGAGGTGCACCA
AAGAAGTTGATTCCAAGGTTCGANGAAACTGAGAGACGATAATGAGGGTT
TGTTTGAGCGAGCGCCTTCGATGAGAGTAAATCCGATGAGAGTAAATCCG
ATGAGTGAAGAAGGGAGTGCACCAAAGAAGTTGATTCCAAGGTTTAGACC
ATTTCTTCTTTTAACTTCTTTCTTGTAGACTTCTCAGTTATAATTTCAAT
TCCTTGTGAACTTCTCAGTTATAACTCTGTGACTTGAAATCTCTCCATTA
CTTGAGTACATCTATCGCCTATTGCATCTTCTTCAGCTCCATATTCTTAT
AATTGGCTTTCTACAAGGCAAACTCTTCATAATTCGAACATTTCGTGTTC
TTTTGAGCGTCTAAGTTAGAGTTACAAACCAAAAATAACAATGCTATATC
GCGATCCAAACTAGATATctaagatttaatttttttaaagattggtaCTG
TTTAAAGTTCCTGGTAAGGctaaacttcatttttgaagATCAATCTTTGA
AAAAGGATGTTCTATTTTGACATAGGTTGAAAAGGAAGATCTCGTTGAAG
TTCAACAAGAAACCAAAAAGAGACCTCTTggatgaagatgatgatgacGA
CTTGATTTATGAGAATCTGGTCAAAACAAAGAACGTCGATGACGCACAGG
TGAGTGGTATTGAGAGTTGCCAGGTGGTCTTTCATGGAGTGACTTTTTGG
CTGAATGTtcttgttttggtgttttttttttgctatttgatCAGAGAGTT
TCTCATTTcgttgattttttaaggaaaatgtcATTGGGTGGACCCCAATA
CTTACTAGCAAAAAGTCCCTTTTAAGTTGTCCTTTTTCGATACATTCAGA
CTTACTGTGTGCTTGCCCGAGCTACTGAATCAACTGTATCTCTAAAAtct
gattattttgaatttcagcTTGACGAANAGGATATAGGATCTAGTAACAA
CTTCTTTTTCAACCacttctcaatatatttcagcTTGACGAGAATTTCGA
AGGTGTGGCTTTCTTCGAAGCAGTCCGTGACGGTATGGATATGATAGTCC
AAACATTGTTGGAAACCAGCGATAATTACCAACTCAACATGTTGGATGAG
AACGGATTCACACCGGCAATGAATGCCGCATGGCACGGACAAGCAGACTG
CTTACAAATCTTAATCAAGCACGGTGCGAATACAGACCTCCGAACGGCTA
CCGGCTGTACCGCAGCACATTTTGCCGCCGGACAAGGTAATGCAGAATGC
CTTCAACTCCTGATCGACGATGATAAAGATCAGATAGATATTAAAACAAA
ATTCGGAGCAACGCCCTTGATTTTATCCGCCAAGGGCGGCCATAACGAAT
GTATGGAGATTCTCCTTGATGCAGGTGCGGATGCAAACGTTCAGTACCGG
GGAAAACAGAATGCGGTACTGTTCGCAGCCGGAAACGGACATTATGAATG
TCTCGAAACACTAATCGAGCATGAAGTTAATCTGAATCAAACTAATTCCC
AAAAAGTAACGCCCTTAATGAGGGCGGTCCAACAAGGTCATAATACGTGT
GTGGTGTTACTTACCGATAAGGGCGCCGATATTAATCTGCAAGATGCGAT
CGGGCGGTCCGCCCTACATTTCGCAGTCGAATATAACAACTCGAAGGGAC
TTNATGCGATCGGGCGGTCCGCCCTACATTTCGCAGTCGAACATAACAAC
TCGAAGGGACTAAAATTGTTGTTACAACAGGGTGCAAATGTGGATTTAAA
AACGAAAGGTGGTTCGAAGCCGCTCGATTATGCTGAGCGTTTTCAAAACA
CTCGCCTTGGAGAAATGATTGAAAATCATATTAACAAGCTCAGGGAAGAA
GtcgaaaaggaaaaagaaattgaagtaCAAAAACAAATCGTCGAAGAGAA
AGAGAACAAAGTTTCCTGTCTAAGTTTCAAACATATATTTAGGCGCCGAA
GTCGCAAAAATTCGGACGTTCAAAAAGCTGTATAACAAATAGAGGGGACC
AATCTATATAGTATAGCAATATTGCAACGTAATATCTTGTATGTGATGGA
AGGAGATTTGCTTTCTGTGGCCCTTATGAGGGAAAAATGTTCTCGAGATG
GGCACCAATAGGCGTTGAACCGAAACATCAAGCTGCTTTGATAAACACAA
ATCTCACAAACAAAAAAGATAGTAAGACCATGTTccgacgttacggttcc
gttccgctccgaaacgaaacagTTCCGAAACAAGTTTGAACATcgaaatt
cgaaacgtcaaaaagaagactttacacagtaaaacagatcgaaacggttt
cacTCCACtaatcggaacggaactgctccattttcttgctccgaaacgtt
cctaaactaatatgaacactctcgatccgtaacgaaaattaCACtagagc
gaaacggaaccgtaatGGCTGAACAGGGTCTAAGCAATCAAATATTGAAA
AGATAGTCCTTTGAAATTGGCAATGATGTAAAAAAGGAGAGAATCGTTTT
CTGATGATATCTTATCATAAACTTGAGAGCACTTGTAGTAAAGAAAACAA
GGTGAGCGGATGTTCGGCGTCGAAAGATAAACAACAAACACTGTGATAAT
CGTTCCATAAAAGAGGGTGATACCTTATCATATGCCAAAGAACACATTGA
ATCCTAATATGAGATTGAATTACCTCATAACTCGTGTATATAATACCAAA
CATTGAATAATATGGATATAACAGGATCTTTGCTATGTTGTAACGCTCTG
AACATTAGAGTAGTTTGTAGTGATATAATACGGATAAAATAAGATCTTTG
CTATGTTGTAACGCTCTGAACATTAGAGTAGTTGTAGTGGCATCTTAACA
ACTCGTTACTAGGCTATTTTGCGAATAATTTTAATTAAACTTTTATTATG
GAGGGCTCCAATTCGTTTTTAAAAGAGCGAAATTATTAccttatattata
ttatatgtGTATATTCTTAATTCTATGAaattaatcttaaaatttctagt
atccaagaagaaaaaaatctcatggGCCCCGGCGACCAGTTTGAAGTAAG
GGGGGAAATATTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041295XLOC_041295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065903-exon-scaffold_448-1491911889:320647..320736TCONS_00065903-exon-scaffold_448-1491911889:320647..320736Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1510915933:320647..320736TCONS_00065903-exon-scaffold_448-1510915933:320647..320736Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1575043694:320647..320736TCONS_00065903-exon-scaffold_448-1575043694:320647..320736Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1491911889:331712..331825TCONS_00065903-exon-scaffold_448-1491911889:331712..331825Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1510915933:331712..331825TCONS_00065903-exon-scaffold_448-1510915933:331712..331825Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1575043694:331712..331825TCONS_00065903-exon-scaffold_448-1575043694:331712..331825Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1491911889:332204..332913TCONS_00065903-exon-scaffold_448-1491911889:332204..332913Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1510915933:332204..332913TCONS_00065903-exon-scaffold_448-1510915933:332204..332913Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1575043694:332204..332913TCONS_00065903-exon-scaffold_448-1575043694:332204..332913Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1491911889:333422..333545TCONS_00065903-exon-scaffold_448-1491911889:333422..333545Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1510915933:333422..333545TCONS_00065903-exon-scaffold_448-1510915933:333422..333545Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1575043694:333422..333545TCONS_00065903-exon-scaffold_448-1575043694:333422..333545Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1491911889:333880..335960TCONS_00065903-exon-scaffold_448-1491911889:333880..335960Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1510915933:333880..335960TCONS_00065903-exon-scaffold_448-1510915933:333880..335960Clytia hemisphaericaexon
TCONS_00065903-exon-scaffold_448-1575043694:333880..335960TCONS_00065903-exon-scaffold_448-1575043694:333880..335960Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:320647..335960 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.014888	0.0144325	0.113498	0.0856279	0.312382	0.38976	0.370218	0.526573	1.56177	4.90158	5.21979	1.65853	26.4778	19.4525	25.1908	33.7791	11.8759	15.2908	8.90514	7.94522	5.2728	2.78053	1.04689	3.11195	3.48844	5.86965	4.65801	2.48807	31.9294	26.9632
Blast
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BLAST of TCONS_00065903 vs. Swiss-Prot (Human)
Match: KDIS (Kinase D-interacting substrate of 220 kDa OS=Homo sapiens GN=KIDINS220 PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 8.557e-27
Identity = 85/299 (28.43%), Postives = 151/299 (50.50%), Query Frame = 1 
Query: 1018 KNVDDAQLDENFEGVAFFEAVRDGMDMIVQTLLETSDNYQLNMLDENGFTPAMNAAWHGQADCLQILIKHGANTDLRTATGCTAAHFAAGQGNAECXXXXXXXXXXXXXXXTKFGATPLILSAKGGHNECMEILLDAGADANVQYRGKQNAVLFAAGNGHYECLETLIEHEVNLNQTNSQKVTPLMRAVQQGHNTCVVLLTDKGADINLQDAIGRSALHFAVEYNNSKGLXAI-------------GRSALHFAVEHNNSKGLKLLLQQGANVDLKTKGGSKPLDYAERFQNTRLGEMI 1875
            KN  +  L++     A   A ++G   IV+ LL+   N  L   D  G+T  M A + G+ D +++L+ HGAN  +          +AAG+G+A+ + LL+ +         K+G TPL+ +A+ GH EC++ LL  GAD + +      A++ A   G+ + ++ +++   N+N T+    T LM A ++GH   V  L D G  +N+ D  G + L  AV   + + + A+              ++AL++AVE  N+  ++ +LQ   + ++ TK G  PL  A + +N  + E++
Sbjct:   59 KNGANCNLEDLDNWTALISASKEGHVHIVEELLKCGVN--LEHRDMGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPIIWAAGRGHADIVHLLLQNGAKVNCSD-KYGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEILKRNPNVNLTDKDGNTALMIASKEGHTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRALLQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKATKMRNIEVVELL 354
The following BLAST results are available for this feature:
BLAST of TCONS_00065903 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KDIS8.557e-2728.43Kinase D-interacting substrate of 220 kDa OS=Homo ... [more]
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