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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065859 ID=TCONS_00065859|Name=TCONS_00065859|organism=Clytia hemisphaerica|type=transcript|length=552bp
ttttagatcaGAGTTCAACACGTGGACTCACACTATTGCTCTGCAAGCTG
GAAATACATGCGTGAATTCGCAATTAAACACAACAATCTGGTTTCCCTAG
TTAGCCTTGACGATAAGCACAAAATTAAGTGCGGAGAGCCTTCTTATCCA
GATGCCGCAGCTGAACGTGGAAAGAAGGTTATTGTTGGAGAAAACCAAGT
GATGGCTGCAGCCCTGCAATGGACCACGACTTTACAAAATTCTCTTTGAT
TCCATCTGTTCACTTGATTATCGACATACCTGAAGATGTCAGCCAGTCAT
TTTATCGTGGTGATGTCCACGTTGGGTTTAAAGATTCGGCATTCGAACCG
TCATCTGCATTACGTCATTCAAGCGAGCTGAAAGAAATTCTTCAACGTAG
AGGTCCGTTATCTCCAGTCCTATTGATGTATACAGATGGTGGACCCGATC
ATCGAGTGAACTATCTTTCAGTAAAAGTTGCTCTCGTTGCACTTTTTCGT
GATCTGAATTTGGATATGCTCATTGCTCTACGAACTGCACCGAGCAATTC
TT Run BLAST on NCBI transcript from alignment at scaffold_447:262028..262920- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065859 ID=TCONS_00065859|Name=TCONS_00065859|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at scaffold_447:262028..262920- (Clytia hemisphaerica)
TTTTAGATCAGAGTTCAACACGTGGACTCACACTATTGCTCTGCAAGCTG
GAAATACATGCGTGAATTCGCAATTAAACACAACAATCTGGTTTCCCTAG
TTAGCCTTGACGATAAGCACAAAATTAAGTGCGGAGAGCCTTCTTATCCA
GATGCCGCAGCTGAACGTGGAAAGAAGGTTATTGTTGGAGAAAACCAAGT
GATGGCTGCAGCCCTGCAATGGACCACGACTTTACAAAATTCTCTTTGAT
TCCATCTGTTCACTTGATTGTAAGAGTAAAATTTAATCGTTTGTGTTTAA
TTCTTTTAAACGGCGATACTTCATGATTGTTATCGGACTCATATAAAAAC
TGTTCTTTGTTATAGGGAATTATTTTAGCTCATTTGGAAAATATCTTCTT
TCAACATTCTTATACATTATAATACATCATCCAGAATCTTTCTTGAACTG
TCTTCTTTCTACAAAAATTCAGATCGACATACCTGAAGATGTCAGCCAGT
CATTTTATCGTGGTGATGTCCACGTTGGGTTTAAAGATTCGGCATTCGAA
CCGTCATCTGCATTACGTCATTCAAGCGAGCTGAAAGAAATTCTTCAACG
TAGAGGTTAGTAAAATTTTTATTTCAAATTTTGTAAGTTTATAATGTTCA
TTTTAATTAATCATTACCAATGTTTCATGTATTCATGTGTTCATGTGTTT
ATTTCTTCGTCTCTCAAAGGTTTGACTTTCTAATAAATTTCAGGTCCGTT
ATCTCCAGTCCTATTGATGTATACAGATGGTGGACCCGATCATCGAGTGA
ACTATCTTTCAGTAAAAGTTGCTCTCGTTGCACTTTTTCGTGATCTGAAT
TTGGATATGCTCATTGCTCTACGAACTGCACCGAGCAATTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065859-exon-scaffold_447-1575043694:262652..262920 | TCONS_00065859-exon-scaffold_447-1575043694:262652..262920 | Clytia hemisphaerica | exon |
| TCONS_00065859-exon-scaffold_447-1575043694:262316..262448 | TCONS_00065859-exon-scaffold_447-1575043694:262316..262448 | Clytia hemisphaerica | exon |
| TCONS_00065859-exon-scaffold_447-1575043694:262028..262177 | TCONS_00065859-exon-scaffold_447-1575043694:262028..262177 | Clytia hemisphaerica | exon |
| TCONS_00065859-exon-scaffold_447-1510915933:262652..262920 | TCONS_00065859-exon-scaffold_447-1510915933:262652..262920 | Clytia hemisphaerica | exon |
| TCONS_00065859-exon-scaffold_447-1510915933:262316..262448 | TCONS_00065859-exon-scaffold_447-1510915933:262316..262448 | Clytia hemisphaerica | exon |
| TCONS_00065859-exon-scaffold_447-1510915933:262028..262177 | TCONS_00065859-exon-scaffold_447-1510915933:262028..262177 | Clytia hemisphaerica | exon |
| TCONS_00065859-exon-scaffold_447-1491911889:262652..262920 | TCONS_00065859-exon-scaffold_447-1491911889:262652..262920 | Clytia hemisphaerica | exon |
| TCONS_00065859-exon-scaffold_447-1491911889:262316..262448 | TCONS_00065859-exon-scaffold_447-1491911889:262316..262448 | Clytia hemisphaerica | exon |
| TCONS_00065859-exon-scaffold_447-1491911889:262028..262177 | TCONS_00065859-exon-scaffold_447-1491911889:262028..262177 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_447 | supercontig | scaffold_447:262028..262920 - |
Blast
The following BLAST results are available for this feature:
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