TCONS_00065775 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065775
Unique NameTCONS_00065775
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length163

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065775 ID=TCONS_00065775|Name=TCONS_00065775|organism=Clytia hemisphaerica|type=transcript|length=163bp
ACAAATTAATGTCAACCAAGATTGGGAAGGCTAATGATCGAAATATTCTC
ATTCTTATTTTTAACACAAACAATAAATTTGAGCTTTAAAAAATAGTAAC
GATATTTGTTCTTTGTTATCTTATTCAGTAGTCACCTCTTAAATCTCTCA
AGTAACAATAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_444:52258..52420

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065775 ID=TCONS_00065775|Name=TCONS_00065775|organism=Clytia hemisphaerica|type=transcript|length=163bp|location=Sequence derived from alignment at scaffold_444:52258..52420 (Clytia hemisphaerica)
GTTTATTGTTACTTGAGAGATTTAAGAGGTGACTACTGAATAAGATAACA
AAGAACAAATATCGTTACTATTTTTTAAAGCTCAAATTTATTGTTTGTGT
TAAAAATAAGAATGAGAATATTTCGATCATTAGCCTTCCCAATCTTGGTT
GACATTAATTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041207XLOC_041207Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065775-exon-scaffold_444-1491911889:52258..52420TCONS_00065775-exon-scaffold_444-1491911889:52258..52420Clytia hemisphaericaexon
TCONS_00065775-exon-scaffold_444-1510915933:52258..52420TCONS_00065775-exon-scaffold_444-1510915933:52258..52420Clytia hemisphaericaexon
TCONS_00065775-exon-scaffold_444-1575043694:52258..52420TCONS_00065775-exon-scaffold_444-1575043694:52258..52420Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_444supercontigscaffold_444:52258..52420 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065775 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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