TCONS_00065722 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00065722
Unique Name	TCONS_00065722
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1314

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_443:278096..292007-

transcript sequence

>TCONS_00065722 ID=TCONS_00065722|Name=TCONS_00065722|organism=Clytia hemisphaerica|type=transcript|length=1314bp
AACAGTTGCTCAAAGATAATAAGAAAGACAAAGCGAAACTACTGTTGAAA
AAGAAACATTATCAAGAAAATTTATTAAAGAAAACTGATGGTCAATTAGA
AAATATTGATCGACTGATATCAGAAGTAGAATTTGCACAAGTTGAATTGA
AGGTTGTTGAAGGATTAAAACAAGGCAATGAAGCGCTGAAAAAATTACAT
GAGATCATGTCAGTTGAAGACGTGGAACGTATTATGGACGAAGCACAAGA
GGGAATCGAATACCAGAATGAAATCGATGAACTACTAAGCGGAGGTTTGA
CTGCTGAAGATGAGGAAGATATTATGAACGAACTTGCTGAATTAGAACGA
CTTGAACTACCCTCTGTTCCTGACACCGAAATTCCAACAGCTGATGTCGA
TGACCAGTTACCCGATGTACCCTCCGCTGAACCTGcaACATCATcgaaaa
cgaaaacaaaagaaacagaACGAGTTGCCATGGCAGCTACTTGATACGTT
TACACGTTTCCTAGACAGGACAGAACGCCACTAGCGGTATTAGAATCAGA
ATGTAGATTTGTCATATTCAATGCTCCAAGTATGATTGATATTCGAATTG
AATTATGGGAACACGTTCTTTTGATTCATGATAACGATTGGTTGAAAAAC
AAAGACTTTTGtaaattaacataaattaaGTTGAGTAGGATTTAACAGAG
TACTCAAGACAAACTGAAAGTGGGAAGCATTTACTTTATTCATATATTTC
GAAAATAACAATAACTTGCGGTTAAGTTGCGGTTTACTTATCAAATTAGA
GTTTTTTAAAACCTTTCAAGTCCATGGGAATTTCTTATctcatcaataac
agattttatAGTTTctgtttcctttttttttgtaattttcaaataattaa
atgggctgttccattaaatttccatacagggggatggacgaaccttttta
aggcaaataagaATTCTGTGAAATATGTGAATACCCCCGTGGAAAACGGC
AAAATCGCAAAAGaagccttggaaaaattctttacaTACCTTAAAAAAGT
AAGGCGTGGACGAGCTAAAATCAGCCTTTTACCCcttagaaattttagaa
taaactTTTACCtccttgaaaaatgaaaaaatactccGTTATACCCCTTG
GAAATTCTTCTccgattaccccctggaaatgttcgtccacccccctgtat
ggatataaaatggaatggcccaattcaTACAAGAAATATTATCagcatta
tttatttttaaaatataatttcttaCCTAGAAAATAATACTGTTATCGTC
CTATTTTTTGAAAC

Run BLAST on NCBI

transcript from alignment at scaffold_443:278096..292007-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00065722 ID=TCONS_00065722|Name=TCONS_00065722|organism=Clytia hemisphaerica|type=transcript|length=13912bp|location=Sequence derived from alignment at scaffold_443:278096..292007- (Clytia hemisphaerica)
AACAGTTGCTCAAAGATAATAAGAAAGAGTAAGTTATTACTTTTTTTTTC
CCAAGCACTTATTTGCGGAAGATGTAATTTTAGGTATCTATGGATCGTAT
GTAAATTAATTATTTTTGTTATCAAATTCTTCTATGTAATTTTATATAGC
TAAATTGAAACCTTCTGTGATATGCCTGAAACAACAAGGGCCATCTATTT
TTACAGTGGAAAAGCTTTTTTTAAGGCAATCTTGTGATTTTTAGTTTTGA
AATTTATCCTAGGGATGAGAAATCTAATTTTCCTTGCGGTAATTTTTAGC
TTATTTTACCGTGTCCCTTTGCCTTTAGCAACTTGCCTCGATATACAAGA
AATAAATTAAGTGTGATCTGTGAAAAGTAAATAACACACGTGGATATACT
AACATGATGATTATTTATGTTGAAAATCTACTTTTTTTACATAGCAAAGC
GAAACTACTGTTGAAAAAGAAACATTATCAAGAAAATTTATTAAAGAAAA
CTGATGGTCAATTAGAAAATATTGATCGACTGGTAAATAATTAAACATCG
ATTTTATATTTGATCTATTTTTTTCTTTAGAGATGTTTACTAGAAGAACT
CTATAGGCAATTCTAAGGTTAAGCTGCATCATGGGTAACCAGGACTAGTT
CCATTTGTCAAATAAAAAATCTTCAAAATTGGGCCTTTGATTATTTCTTT
CAAAAGACAATTTCATCTTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGAAAGTAATCCTTCTCAGATAAAATATTCT
TCTAAACCAGATAATGAAATTTAGAATTTTTTTCTTCAGATAAACTTAAC
ATTGGAAAAAGAAAGACAATATGCAAAACAGTTGCTCAAAGATAATAAGA
AAGAGTAAGTTATTACTTTTTTTTTCCCAAGCACTTATTTGCGGAAGATG
TAATTTTAGGTATCTATGGATCGTATGTAAATTAATTATTTTTGTTATCA
AATTCTTCTATGTAATTTTATATAGCTAAATTGAAACCTTCTGTGATATG
CCTGAAACAACAAGGGCCATCTATTTTTACAGTGGAAAAGCTTTTTTTAA
GGCAATCTTGTGATTTTTAGTTTTGAAATTTATCCTAGGGATGAGAAATC
TAATTTTCCTTGTGGTAATTTTTAGCTTATTTTACCGTGTCCCTTTGCCT
TTAGCAACTTGCCTGGATATACAAGAAATAAATTAAGTGGATCTGTGAAA
AGTAAATAACACACGTGGATATACTAACATGATGATTATTTATGTTGAAA
ATCTACTTTTTTTACATAGCAAAGCGAAACTACTGTTGAAAAAGAAACAT
TATCAAGAAAATTTATTAAAGAAAACTGATGGTCAATTAGAAAATATTGA
TCGACTGGTAAATAATTAAACATCGATTTTATATTTGATCTATTTTTTTC
TTTAGAGATGTTTACTAGAAGAACTCTATAGGCAATTCTAAGGTTAAGCT
GCATCATGGGTAACCAGGACTAGTTCCATTTGTCAAATAAAAAATCTTCA
AAATTGGGCCTTTGATTATTTCTTTCAAAAGACAATTTCATCTTTTGTAA
TAATCGATGTAAAGTACTCTTATTTAAGACCTTTAAATCTCTGCTTAAAT
GCTGCTAAACTACTCGAATTTAGATCATATTACTATTTTGAATTGCTAGT
TAGTTCTTTACTTCGTTTTAGATATCAGAAGTAGAATTTGCACAAGTTGA
ATTGAAGGTTGTTGAAGGATTAAAACAAGGCAATGAAGCGCTGAAAAAAT
TACATGAGGTATATTTATGATACTGTGAACTAAAAGCTTATAATATTATA
CTTTTTTAAGCTTATAATATTATACTTTTTTCTAAGGAAAAGATTGAAAA
CAATTGAATTAAATTGAAAACTTATTGATCAAATCACGTAATGCTTTCCT
AGAATGATAAAAAAGAGTTTCTGAAACGATAAAAAACGATATATACGAGG
CAATATGACAAAGAAAATGAAGAAACCCGTATATGAGTTCCTTCAAACCT
CTCCATTCGAAGGTCTCGAGAGTCGGGAGTCAAAAAACTCTTCAAAAATT
GTGTTTTCTCTTAATTAAGATCATGTCATAAGATCATACCTTTATGAGCT
CCCATAGAGCCCTCTCTCCAAAAGGCCCCGCTCGACTGTCATGAAGAACC
AAAACTTTTCACCATAAAAACTTGTATTTTTTTCTCACTTAGATCATGTC
AGTTGAAGACGTGGAACGTATTATGGACGAAGCACAAGAGGGAATCGAAT
ACCAGAATGTAAGAATTACTTTTATATTTATTACGGTTCTGTTTCCATGA
TCTAAATTTGGATGTATAAGATACTGCTTTCATAAGGAAAGATTTAATAA
ATTTGCACATTCATAAACGATTTTTGACAAATTATGATTCATTCATCTTT
TTGACTGTCCTAGTTTTAAAGTATACTAAAATTAAAGTGAGTAGGCTTTC
AATAAAAAAGAATCAACAAAAAATTCTTATTCTAAGGTCCATAATATCTC
GAGAAACTTGTAGTAGAGAGCCTTCATTTGCGATCAAAAGGTTTTGGACT
ATGTAAAAAAAATTGTAAATCTACAAACAAAGGTGAAAAGATACCCCTCT
TACAGTTTTGTATTTCTCTAAGCTCAAATTCAAGTGTTCTTTTCACTCGC
AAATTTGCTGAGTGACTCTACAAATTGTAGACCTCAAAGAGTAGAAGAAA
TTATTACATATAGCCTGGAAATCTAACAAATAATATATCATTGAAAAAAT
TGATTGATAAAAAATCAATATGTTGTTGCTTTCATTTATCTTTATACATG
GCATGGACCAGGGGTTTAGGTACCCCCTAAGAAAATAGGTACCCCTTGAA
TTTTAGGTACCCCCAAACAACAGACGTTAGTAGGTACCCCCTGTGATTGG
TACCCCCTGTGACTTGAGTATATGTCAAGAAATGAAAAAATTGTATAATT
TTACAATTAAAAAGAATAATGACAGTTAGATAAAAGCAAGATAAAATATA
GTTCCCAAGCCCCCAGACCTTACTGCATAAAAGTTAGATTAGTTAAATTT
AAAAAAAATCCAGCCCCCAGCCTTTTTCAGGAAGATTTTGGTTGTAGCCT
GCGGGCTGGGTGGGGAGGGGGGGGGTTCATGCCATGTTATATTAATATCA
TTAGAAAAATTTCAAGTTCACTTGATTCTCTATTTGTTAACTAAGTTGTT
TTCGTTCAAGTATTTCAAATTTTGAGAACAACTTCCATGAGAATTGCTAC
CTTTTATTAAATGTCTGTTTTTATTCAAATTTGAAAGAGGATAATTTGAG
CGGGTCATCACTTGCATATTTTCGTGAAATTTTTCCTCCAGTCCATTCGG
TCACCCCGATCTGTTCGAATTGGCAACGAGTGAAAAAGAGAATAAACGTT
TTGACAACATCTCTGGAAAGAGAGAATCCAGCACATCTATGGTTGCTCGG
TGTAGATTGTCCGAGAAAACGACCACCGTAGGTGAAGTTGTATTTTTCGG
ACTCTTCCGGGTTTCGGTGCATATCAAATTGCTCGGGATTCTCGAAAAGT
TGATCATCCCGGTGTATGAAGTAAGGTAGCGCGCATAACAAGTCTCCTTT
GTTAATCCGGAATTTCCCCGATGTTGAATCGAGCTGGAAATCGGATTTCG
CTTTACCATAAATGAAAGCTTTAGATGACCAACGTAGCATTTCAGTGAAG
AATTTATGGAGATTTGGTAATGCTGATAGATTGGTTTGTTCTGGATCCTT
GAAATATTGATCAGCTTCTGTTCTCAGCAGTTGCTTGTCATCGCTGGTTA
ATCTCAGGTAGCAATACAATGAATTGAGAACGAAGATTGTAATAGCGTTG
CTGGCATCCAGGCATACGACATAGCATATATCTTTGAACATTTCTTCTTG
GGTCAACCCGCTGTTTGAGAATTGGATAGATAGGTTTTTTAATGAATCCA
CTTTGTTGAAAATCGTCATGATGTTTTCGATCAAGGTGTCGGCTTCCCCA
GGCATCTTTTCCATAGTTAACATACCTTTGAAAAAGAGAGAGATCAACAT
GCTTTTAATTACTGATTGAAGCCAGTATCTACCTTCCCATTGGTCAGGAT
CAGCATACAAGCTTACAATTTTATCAATGATCAAGTTGGCTTGTTTGAAG
CCAACTCGTTGGGGTCTCACCAAGTACCTGAAGTTGCCCAGCTGGCACAC
AACGTTCTTTCGACCTTTATTTTATTTATTTGAGTTGCCTGAAGATTGCC
TTTATCTAATGTTCACAACGTCCATAATAACGTTAGATGAATGTTGAAAT
AAAGTTGTATGCCAGCTGGGTGGCTATGACTATAGATGTTTGGTGGCAAA
GTGTGCGAGCTCCTGTGAACTTACCTTGTGTATATTTCTCGAGAGGTGTT
ATGTCTTCAATGTGAACACCCAACAACATGTGACAAATAACTCGTTTAGC
TGCAGTCGAAAACATTCCTTCCCAATCCACAGATGAAGCACCACCAATAC
CATGTTTACTGAGTACCTTGAATTCTTTCTCAATTATGGCTACCATGTTG
GGTTTTTGTTTCTCGTAACTCTTAGCAACGAAATTCATGATAAAAGGTTT
ATGTATTTGATGACCTTCGCCAACACTGAACACACAAGGCGTTTGACCTA
ACATCATTTCTGGACGTAGCTCCAAGAAACCATGGCCGGTTTTGCTTCTC
TCCGTTTTGGTCATGTCCAATACAGCGGCAACAGCTACATGGTCACACAC
AAACGTTGTCCAATCGTTGAATATTTTGGCAGAGAATACAGTACTCTGGT
GTTTTTCTATTTGTTGTTGGAAGAAATCCCATCCGTTCCATTTGAGCTGG
ATGAGATTGAAAAGACTGATTTTCCACCACTGGTGTGGTACGTCTCGTAA
TTCTTTGTTTTTCGTCGATGTCATTTTAATTTTTCTTCCCTAGAAAGAAT
TTTCAAAATGCTATAGTCACAAATTATTCTGTAAAGCCCGANATCGTTAG
ATCGTGCATCTTAAATTACACCAACCCCTTTATACTTACATTTTGGATAC
TTCAAGGTCAGAAATTTTTGAAAGATTGGGGTAAAATCAAGTTCACACCA
AAGAATTTTCAAGAGGTAATCCATCATGGAGCTCAGTTAGTTGTTGCTTT
CATTTATCTTTATATTAATATCATTAGAAAAATTTCAAGTTCACTTGATT
CTCTATTTGTTAACTAAGTTGTTTTCGTTCAAGTATTTCAATCTTTGAGA
ACAACTTCCATGAGAATTGCTACCTTTTATTAAATGTCTGTTTTTATTCA
AATTTGAAAGAGGATAATTTGAGCGGCTCATCACTTGCATATTTTCGTGA
AATTTTTCCTCCAGTCCATTCGGTCACCCCGATCTGTTCGAATTGGCAAC
GAGTGAAAAAGAGAATAAACGTTTTGACAACATCTCTGGAAAGAGAGAAT
CCAGCACATCTATGGTTGCTCGGTGTAGATTGTCCGAGAAAACGACCACC
GTAGGTGAAGTTGTATTTTTCGGACTCTTCCGGGTTTCGGTGCATATCAA
ATTGCTCGGGATTCTCGAAAAGTTGATCATCCCGGTGTATGAAGTAAGGT
AGCGCGCATAACAAGTCTCCTTTGTTAATCCGGAATTTCCCCGATGTTGA
ATCGAGCTGGAAATCGGATTTCGCTTTACCATAAATGAAAGCTTTAGATG
ACCAACGTAGCATTTCAGTGAAGAATTTATGGAGATTTGGTAATGCTGAT
AGATTGGTTTGTTCTGGATCCTTGAAATATTGATCAGCTTCTGTTCTCAG
CAGTTGCTTGTCATCGCTGGTTAATCTCAGGTAGCAATACAATGAATTGA
GAACGAAGATTGTAATAGCGTTGCTGGCATCCAGGCATACGACATAGCAT
ATATCTTTGAACATTTCTTCTTGGGTCAACCCGCTGTTTGAGAATTGGAT
AGATAGGTTTTTTAATGAATCCACTTTGTTGAAAATCGTCATGATGTTTT
CGATCAAGGTGTCGGCTTCCCCAGGCATCTTTTCCATAGTTAACATACCT
TTGAAAAAGAGAGAGATCAACATGCTTTTAATTACTGATTGAAGCCAGTA
TCTACCTTCCCATTGGTCAGGATCAGCATACAAGCTTACAATTTTATCAA
TGATCAAGTTGGCTTGTTTGAAGCCAACTCGTTGGGGTCTCACCAAGTAC
CTGAAGTTGCCCAGCTGGCACACAACGTTCTTTCGACCTTTATTTTATTT
ATTTGAGTTGCCTGAAGATTGCCTTTATCTAATGTTCACAACGTCCATAA
TAACGTTAGATGAATGTTGAAATAAAGTTGTATGCCAGCTGGGTGGCTAT
GACTATAGATGTTTGGTGGCAAAGTGTGCGAGCTCCTGTGAACTTACCTT
GTGTATATTTCTCGAGAGGTGTTATGTCTTCAATGTGAACACCCAACAAC
ATGTGACAAATAACTCGTTTAGCTGCAGTCGAAAACATTCCTTCCCAATC
CACAGATGAAGCACCACCCATACCATGTTTACTGAGTACCTTGAATTCTT
TCTCAATTATGGCTACCATGTTGGGTTTTTGTTTCTCGTAACTCTTAGCA
ACGAAATTCATGATAAATGGTTTATGTATTTGATGACCTTCGCCAACACT
GAACACACAAGGCGTTTGACCTAACATCATTTCTGGACGTAGCTCCAAGA
AACCATGGCCGGTTTTGCTTCTCTCCGTTTTGGTCATGTCCAATACAGCA
GCAACAGCTACATGGTCACACACAAACGTTGTCCAATCGTTGAATATTTT
GGCAGAGAATACAGTACTCTGGTGTTTTTCTATTTGTTGTTGGAAGAAAT
CCCATCCGTTCCATTTGAGCTGGATGAGATTGAAAAGACTGATTTTCCAC
CACTGGTGTGGTACGTCTCGTAATTCTTTGTTTTTCGTCGATGTCATTTT
AATTTTTCTTCCCTAGAAAGAATTTTCAAAATGCTATAGTCACAAATTAT
TCTGTAAAGCCCGAAGAGCTAGATGTAGTGCATTAAGCTCTACCAAGCAA
AAAAAGTCAACATCGCAAAAAATATTGGTGCTATTGTTTTCGAAAACCCG
CGAAGCTTCTTATTGGTCAAGCGCTCAAATTCTATTGTAATGTCACGTGA
CCTACAAAGGATTTCCTACCTAACCTCGGCGCACTTATCAGCCAAAGCAC
GACATCTAGCCCATCGGGCTTTATAAATTTATGGCTATAATACGGGACAA
TCATTAAGAACATTAATAAGTCGCAAACCATACGAGTTACGAGGACTGAC
CTTAGAAATATGCCTTGTTTCATTCAGAATAATTTTATCTGAACTCACTG
GTTTGTAAACTACAATCAAGTGTATCTCAAGGCCGTAATATTCGAGACAA
AAAGGGGAATTCTCTGTAAAACTTTATTAAAGCCAAGAAAGATTGCCAAG
GGTAATCAAAATTACCCTTAGACAGAGCAAAATTACCCACAAACAGAGCA
AGTTTACCCCCCGGACAAGGCAAATTTTGTAGATTTTTCACTATCCCCCC
TGGACACTATATCCTCCACCCACCCCCCATGTTCGGACATTTTCTGGAAG
AGCCCAATGTAGTGTTTTAACATTCAACTTGATACTTTGGGGCTTTGGAG
TTTTGAAGCTCAAAATCAAAAGTGTTCCATTAAGACCGAAAATATAACCT
GGAAGCCAATAAACTTCTCTCATAAAGTGTTCCATTAAGACCGAAAATAT
AACCTGAAAGCCAATAAAATCCTCTCAAATTGAAATGACCAATGAAAGAA
AGTGGAAATACTTAAACCAGCGAAAATACCCAGAAATGCCGATTCATTTT
AACAATGATTGTAGTTCGCTTTGTCTAAATTTTAACGTTATGCTTTTTTA
GATGATTTTTTAGATCTGATTTGAATGTAATTACATTCTATGTTTAGCAC
TTATTATCACGGTAATCATCACAAAAAATTGTTGGTCAGATCCATTTTGA
TAAGAAGGTAGCAAGCTAGACGACAAATTCAGACATAGTAGAAATAATAG
AGGGAATAAATTTAGTCTATACAAACTAAATCCCATAACAATAATATACT
ACTGTATTTGTATTACACGCATTATAAACGACTCCAGTCTAATTAAAAGG
TTAATCTTGATTTTGCCAGCAGTGCCAATAAAAAAGATAAGTTTGCGACC
ATAATTAAGGGCCACTACGTTTTTTATATAATGTTCAAAGTTGTCGCCTC
GAAATTCAGCAAAACACATTAACTATCAATAATTCAGGCCTTTTTTTGTG
TAAAGTCTAATTTTCTCTCTCAAAAGAAAAACATTTTGACTACTGTTAGA
AACTTGCACCAAAACCATTATCCGAGCTTACCTGGCGTTCCCACCTACAA
TCCAATGTCTTTTGAAATCATTATCTCTTTGCTTACTTTCGTTATACAGT
GTATCCGGTAAAAAAGCAGAACAGTTAAAAATAAATTAAAATCTCATAAT
CTTACTAAAGTTTCGAATAATAAACTTACCAAAGTAAATGTTAAAAATCA
GACACACCGCGAGTGACTTCACTCATAGAGTACTATTTTCATAATAAAAA
GCCTAAGAAAAAATGACATACTTTACTACGGTAAAATAATCTGTGACAAT
TAAAAGGACAGCCGATGTAAAACCACTAATTGAATGACATCAACTTTAAA
GTTTAGTATAAGTACTAGTAATCGTATGGTTTGGAGTGCAATTAACGATT
AATCACGAGTAACAAAGGAGAAAATAGTAATTTGCACGAGTCCGAAGGAC
GAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAAAAAGTGGTAATAGTGC
AATTAACGATTAATTGCACTCCTCTAAACCAATCAGATTCGAGTAATTTT
GCACGGCTGACGATTAATAAAGTAATTAGCAGAAAATATTAAGACAGGTA
AGTAAGACGTCATATTTCCAACAATAAAATAGGTTTTTAGAAAAAGAAAT
TGACTAATAATGTCATAAAGATCCATGTAAAAAGTATGACGATTTTGTTT
TGATTAAATTCTGTCCTGCTTTTGACCGAACACGCTTCACACACTGTTTT
ACAAATTACGAATCGCCTTGCTTTTCCAACTTTAATGATAAAGACTTTTA
GATTTTTTTACTGTAATAGATTGTTATTATTTTCGTCTGACAGTAGGCTA
TATAGATTAGAATCTTTTCCAAAATTGCAGCTTCGTTTTGATGGTTATGT
GGTTTCTGAAATGAAGTTTTGATTAGAAATGCAAAATATTATTGGTTTAA
AATGAATAAAAATGTGTTTGAATATAATAGACTGAGAGAAAATCATTTTG
AGGGGAAGAAAGTGCGTACTTCGCAACATTAAAAAAGAACGACAAATTTC
AACATCCACAACCCGACCGAAAACCGTAACACCCCTACGTATTCATTCCT
CTTTGTATTTTGTTTAACGACTAACAGTTTATAAAATGAAAATATACGCA
TGCGTTTTAACTTTCTTTTGAAAATGAAACAATACCTTATCGGGGAAAAA
AATGTCGGAAGAAAGTGACGAAAATTTTGAGGGGGTGACGAAATTTTTCC
CCGACATTTTTTCACCCGACCAAAACTTGTACCCGATTTTTTTATCCCCG
GCCAAAACATTTACCCAATATTTTTTTACCGAAATCAGTGCTTTAAACGT
CGAATTATTAGATCCATTTTCGAGCTAGCCAAGGAAACCATTTCTTTTGG
ACAATTTAGTCGGGTGAAAGTGACAAATTTGAAATTTTGGTCGGGAAAAA
GTGACAAAATTGCCTCTAGATGACAAAATTTTTCCCCGACGAAAAAAAAA
CCCGACTAAATAAAACTCCGACATTTTCTTCCCCGATAAAGTAGATGCGA
AGAAGACTCTTTCTCTATGTGGTTTAATCAATCAAGTTGATACTTTATTA
AGGTGATGTAGAGATTTTCATCACGTCAAATCTTTCGGTCATTTTTGAAA
TAGGCTTGCCCCCCCTGCTACTGTCATTTCTCTAATTCAATGCGTCATCT
AATAATAAATATGGGTCAATTATTTTGACAAGTTTTGTTTAGTTTATTTC
CTTTGAATATGAGTGTGGATACTTTTTGAATCTACCTCAAAGGTCCTAAA
AGCCCGCGCCCGTTCGTTCGTTCGTCCGTCCGTTCAATTTCCACACTATC
AGGCTATCGTGTGGAGTCATTACGTAATATTTTCACCGCTAGAGTCAAAA
TGGTATCCACCTAGCCACAAAAAGTCTTTTACTGTCAACATTCTCTAAAA
GTTCGCTCAACAATCAAACGCGCCAAAATATCACACATTTGAAAAGTCCT
GTGTGTACCAAAACCAAGCTGGTGCTTGATTGGCAAAATAGTTCTACCAG
CTCGTCTCTCAAATAATTGTTGGACCTACCCCGGTGGAGGTCTTATAAAT
TAACCTGTGTTTGTTCGTCCGTCCGTCCGTTCGTTCGTCTGTTACCAACT
TTTCTCAGGATTGAATCATAGGAATCTTTTGTTTTTTGGTACAAAGGTGC
AAAATGGTGGTGGCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAATT
TTGTTTGGCAAATTTGGGCTAAAAAACGGCTAAAAAACGGGGTTTTTGGA
CTTTGTGAAAAATCGGAACATTAATTTTTTCTGATTTTTTGCATGAAAGT
AGGGTACCATCATAGGTAAAAGATGGCTCAAGCAGANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTTT
ATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAAT
TACTCAATTTTTTTATGAGATAGATGTTTTTTTTGTTCATGAGGGCTTAC
TTTTGAAGAATATGTGTGTTCAGACAGGAAATTTTAGTTGCTTGGCGTGT
TCTTATAGAAAAACTGGCCAAATTCGATATTTTTTATAAGCACATTATCA
TTTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTCATTCTTTATGA
TATTTTGCACAAAGATGCATAACTTTCGAATGTGACGGATAGGAGCCCGA
TTTTCAAAGAAAATGTTTTTGGGCAAATTTGGGCCAAAAAACGGCTAAAA
AACGGGTTTTTGAAATATTGGATCATTGTTTTTTTCTGATTTTTTGCATG
AAAGTAGGTAAAAGATGGCTCAAGCAGATTTTTGTAAAAAAAGAGTTTTT
CGGCTCAAAAAACGCATCTTAATCTATAAGAATCACTATTAATAAGCATA
CATCAATGTTCTTAGCCGAATTACTCAATTTTTTGATGAGATTTTTTTGG
TCACGAAGTTTTGAATATGAAAGAATATTTCAAGAGCATGAAATTTTGGT
TTCTAAACTTTTTTTTATAAGAAACAAACGACTAATTTTAATAGATCGTC
ACTATTTGTGTTCTGAATGATTGTTTAGTGGTCACGTCACGTAGATATCA
ATTATAAATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCACT
TGTTTATTATTTGATTGTTGAGCGAAACTTTTTATCTATATAACCGTACA
CAGTTCTCCATTCACATACTAGCAAAAATCAGGTCATGAATCAGCAAAAC
AGTTTACTATCAACACAACAAATCCCTGGTTCGCAACGTACTGGCTAATT
CTAACCCAGTCTTTTCACGGCTTCAGTGTTGATAGGTGCGAGTCTTATGA
GGAATATTTTCTCTTTCTTTTTCACAGGAAATCGATGAACTACTAAGCGG
AGGTTTGACTGCTGAAGATGAGGAAGATATTATGAACGAACTTGCTGAAT
TAGAACGACTTGAACTACCCTCTGTTCCTGACACCGAAATTCCAACAGCT
GATGTCGATGACCAGTTACCCGATGTACCCTCCGCTGAACCTGGTAAGTC
TGACCGATTTTGTGTCTCCAGCTGAATAAGAATGACCTAGAACTAGCTGC
TGTTTATGAACTAAATTTGGTAAGTTTCCCTGGTTTTTTAACCTGCTTCC
CTTTAGCCTTGCCGAACTAGAAAGTTATAATACTCCTTATTTTCTAAATT
CTGATCCCGGCAAGTTGCTCTGATTTGACTATTCCAGAAAAATTAACCCC
CGTTGTAGTTGTAAGCTAAGTAGATCTAGCGCTCTCGATGCGGGTACCAC
TTCAAAAAACTCCGATCAAAATATTTTGGTTGGTCGGGATTGAGAAACTG
CATCCAGGATCTATATAAAGCTCAGTGATATCACCAGAAGGCTCTCAAAA
AGAATTGCTATAGAAGTGAAGAAGACATTTAAATTGCTATGTTTTTATTT
CTCAACGTAACTCGACTTACCCCTAAATGGAAGTATCCCACTACTACGCA
AGAAAGGGCCAAAAGGGCCTTAAACAGTCATATTACCAAATATAGGGCAA
GGTTGGTCATTGTATTGAATTTCTACAGGACTAATTAGTCGAAAAGTGAA
TGAAATGGTATTTGTTTGTTTTCATTTTTTCAGCAACATCATCGAAAACG
AAAACAAAAGAAACAGAACGAGTTGCCATGGCAGCTACTTGATACGTTTA
CACGTTTCCTAGACAGGACAGAACGCCACTAGCGGTATTAGAATCAGAAT
GTAGATTTGTCATATTCAATGCTCCAAGTATGATTGATATTCGAATTGAA
TTATGGGAACACGTTCTTTTGATTCATGATAACGATTGGTTGAAAAACAA
AGACTTTTGTAAATTAACATAAATTAAGTTGAGTAGGATTTAACAGAGTA
CTCAAGACAAACTGAAAGTGGGAAGCATTTACTTTATTCATATATTTCGA
AAATAACAATAACTTGCGGTTAAGTTGCGGTTTACTTATCAAATTAGAGT
TTTTTAAAACCTTTCAAGTCCATGGGAATTTCTTATCTCATCAATAACAG
ATTTTATAGTTTCTGTTTCCTTTTTTTTTGTAATTTTCAAATAATTAAAT
GGGCTGTTCCATTAAATTTCCATACAGGGGGATGGACGAACCTTTTTAAG
GCAAATAAGAATTCTGTGAAATATGTGAATACCCCCGTGGAAAACGGCAA
AATCGCAAAAGAAGCCTTGGAAAAATTCTTTACATACCTTAAAAAAGTAA
GGCGTGGACGAGCTAAAATCAGCCTTTTACCCCTTAGAAATTTTAGAATA
AACTTTTACCTCCTTGAAAAATGAAAAAATACTCCGTTATACCCCTTGGA
AATTCTTCTCCGATTACCCCCTGGAAATGTTCGTCCACCCCCCTGTATGG
ATATAAAATGGAATGGCCCAATTCATACAAGAAATATTATCAGCATTATT
TATTTTTAAAATATAATTTCTTACCTAGAAAATAATACTGTTATCGTCCT
ATTTTTTGAAAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041174	XLOC_041174	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_443	supercontig	scaffold_443:278096..292007 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	2.95474	5.8391	0	0.430844	0.659218	3.17039	1.27123	1.15489	5.36037	4.52134	0	1.49902	0	0	0	0	9.03835	0	0	0	0	0

Blast

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BLAST of TCONS_00065722 vs. Swiss-Prot (Human)
Match: CHMP6 (Charged multivesicular body protein 6 OS=Homo sapiens GN=CHMP6 PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 4.652e-32
Identity = 56/112 (50.00%), Postives = 85/112 (75.89%), Query Frame = 3

Query:   57 HYQENLLKKTDGQLENIDRLISEVEFAQVELKVVEGLKQGNEALKKLHEIMSVEDVERIMDEAQEGIEYQNEIDELLSGGLTAEDEEDIMNELAEL--ERLELPSVPDTEIP 386
             YQE LL +T+ Q+ +++ ++  +EF Q+E+KV+EGL+ GNE L K+H++MS+E+VERI+DE QE +EYQ +IDELL+G  T EDE+ I+ EL+ +  E++ELP VP   +P
Sbjct:   68 RYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEELSAITQEQIELPEVPSEPLP 179

The following BLAST results are available for this feature:

BLAST of TCONS_00065722 vs. Swiss-Prot (Human)

BLAST of TCONS_00065722 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CHMP6	4.652e-32	50.00	Charged multivesicular body protein 6 OS=Homo sapi...	[more]

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TCONS_00065722 (transcript) - C. hemisphaerica