TCONS_00065714 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065714
Unique NameTCONS_00065714
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2324

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065714 ID=TCONS_00065714|Name=TCONS_00065714|organism=Clytia hemisphaerica|type=transcript|length=2324bp
CAAGTTTGCAGACTGACAAATCTTTCTCTGGGTTTCTTCACTCAACCAAC
CAACACACATCTTCGCAcagcaaattttttgttttgtttactttcacaca
aacaaattttgtttactTTCACACAAACATAACAAATATGAGAAACACAA
GCGCcgcacaaaacaaaaaaacattggTTATCCCTTCCGGCTTTCAAGCC
ATGTTGGAAGCATTGGCTCGCGACGTCCTTATTCAGCAACCGGCCGACGT
CGAAGAATTTGCTGCGACTTTCTTCAGTCAACGCGTTCAGTCACGATGCT
GTAAGGGACCATCTGCTACCTGCGACAAGACCTCTCCTTCATGTACACGC
ACAGCCACAGCTGAGACTACCAACAGTCAAAAATCGGTCGAAACTTATAA
TGCTCCCGCGACATCCATCGTTAAGATGCAAGACTTTGAGTCCGATCTAG
CTGAAATGGCTACTAAAGACTCGGGATGTTGTCCCTGTGCTGGTCAATCA
GCGGCGTCCCCACCTTGTCAATCAGCAGCCGGAAGTGTTGCTTCGGAAGT
ATCAACAACATGTGCTTCTAAGAAAAAGTCATCCGTTGCTGCGGCGCTTA
TCGAGGCACCTTCTAAAAAAGATTCGGTTGCCGTGAAAAAGTCATCCATT
CAGGTAGCGAAGAAACAAAGTAGCGTTGCTGCTGCtaaaaaatcttcaat
caaGACTGAGCGTAAATCAAGCACAAAAGCTCGTGTACTAAGCGGCACTG
CTACTCGATCCACCGCTTCTGTTGAGAAACAAGCGAGTCCTGCTGCATCT
AAGACCACTACCAAGGTGAGCCAAGCTAAGGTTACGTCGTCAGTTTGTTC
GCGTAAGAGCTCCGTAATGGCGAAAACTGCTTCCGTACAGTCCCGTAAAT
CAGACATCACGTCTGCACGCAGCAAAGCCTCGACTGTAAGTCGAAAGCAA
CCACCCACGCCAAATACAAGCGTCCAATCAGTCCGTTCAGTCAAGGATAA
GATGTCCGCCCAAGACACCGCCCAGCTTCTCGCAAAGGCATCTAGCCGAC
TAGTAGAAGATGCTTTGAAAAATGTGTCATCCAAAACTCAAGAGGAATGT
AAATTTGAAGAGGATGCTGTAATCGTTGAAGCAGACATCTCGTGCCCTCA
GATTGTTGCAAAGACTTCAGCCCTTGCTGAGAGTCCTGCCACAGAAGCAA
CCCACACTGAGGTCCCTGAACCAGTTACCGACAGCCAAGAGCAGGCCATC
GAACCTAAGGAAGCTACACAAGAGGCTTCTCCTGAACCAGCTGCAGATGG
CCAAGAGCTTGCCAAACCAATTGAAGCTAAGACCGAATCTGCCGCCGCTG
TTTCTACTGAACCAGCTAAAATGACTTCCTCAGCACAAGCTGTTGAAACT
ACACAAGATTCACCTACCGAAGCCAGCCAAGTGTCTGAATCTGTTCCTGA
GCCTGCTGCTGAAACTGTCTCAGCTGAGGCTGAACCTAAAGTCGTTGAGG
CTACTGAACCCGATTCTGAGGCTTCCTCAGAGCCAGCAGCTCCTGCTGAA
ACTACTGAAGCAGCCCCTGAACCCCAAGAAGCAAGCCAAGAGACTGCTAT
TGAATCAGAAGCCAATGCTGAATCTAACCCCTCAGTACCAGCTTCTGCTG
AAGTCAGTCAGGAACAACAAGCTGACGGTACCCAGGCCGATAAGCCATCT
GAGACTCCCGTGGCTCAAGAGGAACCAGCCGATGAATCGGTTCCCGAATC
CACCCAAGAACCGACTGCTGAGAATGTAGAAGCCCCATTAGAAACATCAG
TGGAAGCTTCCCAAGAACCAGCAGCTAACTCTGAACCATCCACTGATGGT
GTACCTGAAACCTCTGGTGATGTTGAAGAGTCTGTATTAGAAACAGTGGG
GGCCATCCCTGCTGAAGCTACTCAAGAACCATCTGCTTCTGAACCAGCTG
CCGCCCCATCCATACAGGAGGCTTCTCCTGAACTGGCTACTGACGGTCAA
GAGCAAGCTTCTGCCCCTGTTGAAGCTACCAAGGAACCATTTGCACAGGA
AGCTGCCCAAGAGCCAACTGCCCCGCAACCCTCCCCTGAATCAGAGGCTA
CTGAAGCTAACCAAGAACCAGAAGCTACTGCTGAAGCCAGTCAGGAGCAA
CTAGCTGATGCTAACCAGGCTGATACCCCACCTGAGACCGCTCAAGTGAC
AACTGAAGCTGCCTCGCAAGAACCAGCCCCTGTCAGTGCTGGATCAGCAT
AAATCGCCCCCCCCCAGAACCCTTTGTACTTTAAAGATTTGAATCATTTG
AAGAaatataaacagaaagaaaat
Run BLAST on NCBI

protein sequence of TCONS_00065714-protein

>TCONS_00065714-protein ID=TCONS_00065714-protein|Name=TCONS_00065714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=749bp
SLQTDKSFSGFLHSTNQHTSSHSKFFVLFTFTQTNFVYFHTNITNMRNTS
AAQNKKTLVIPSGFQAMLEALARDVLIQQPADVEEFAATFFSQRVQSRCC
KGPSATCDKTSPSCTRTATAETTNSQKSVETYNAPATSIVKMQDFESDLA
EMATKDSGCCPCAGQSAASPPCQSAAGSVASEVSTTCASKKKSSVAAALI
EAPSKKDSVAVKKSSIQVAKKQSSVAAAKKSSIKTERKSSTKARVLSGTA
TRSTASVEKQASPAASKTTTKVSQAKVTSSVCSRKSSVMAKTASVQSRKS
DITSARSKASTVSRKQPPTPNTSVQSVRSVKDKMSAQDTAQLLAKASSRL
VEDALKNVSSKTQEECKFEEDAVIVEADISCPQIVAKTSALAESPATEAT
HTEVPEPVTDSQEQAIEPKEATQEASPEPAADGQELAKPIEAKTESAAAV
STEPAKMTSSAQAVETTQDSPTEASQVSESVPEPAAETVSAEAEPKVVEA
TEPDSEASSEPAAPAETTEAAPEPQEASQETAIESEANAESNPSVPASAE
VSQEQQADGTQADKPSETPVAQEEPADESVPESTQEPTAENVEAPLETSV
EASQEPAANSEPSTDGVPETSGDVEESVLETVGAIPAEATQEPSASEPAA
APSIQEASPELATDGQEQASAPVEATKEPFAQEAAQEPTAPQPSPESEAT
EANQEPEATAEASQEQLADANQADTPPETAQVTTEAASQEPAPVSAGSA
Run BLAST on NCBI

transcript from alignment at scaffold_443:112486..117170-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065714 ID=TCONS_00065714|Name=TCONS_00065714|organism=Clytia hemisphaerica|type=transcript|length=4685bp|location=Sequence derived from alignment at scaffold_443:112486..117170- (Clytia hemisphaerica)
CAAGTTTGCAGACTGACAAATCTTTCTCTGGGTTTCTTCACTCAACCAAC CAACACACATCTTCGCACAGCAAATTTTTTGTTTTGTTTACTTTCACACA AACAAATTTTGTTTACTTTCACACAAACATAACAAATATGAGAAACACAA GCGCCGCACAAAACAAAAAAACATTGGTTATCCCTTCCGGCTTTCAAGCC ATGTTGGAAGCATTGGCTCGCGACGTCCTTATTCAGCAACCGGCCGACGT CGAAGAATTTGCTGCGACTTTCTTCAGGTAGATTTATGATTTTTATTATC TCCTTATCTTTCTTTTTATCTACATTGATTAGATTTTGAGCTGCTTGAAT AAAAATTACGTTATTTACCGCAGCATTGTTGCACAACAGATGCTGTTGTA TATTTGTCATTATCTTGGTTTCTGCACAGGCACCTAAGGCTAAGATTCCC ACTCGCAGCGGTTCACTTGACAAGTAAACCAACCTTCGTCAGGGACAACT CATGCTATGTGAGGGGAATCGGGTAGCCAGTTCAAGATGCTGAAGGGGCG CTCTTGGGAAGTGTCTATAGTTTCAAAAATGGGCCTCAGAGTCTCCTGCA ATTCAACCAAATAGAAATTGAAATAGAAGCATAGAAAGGCTTTAACCGAC GTTTGCTTTATAGTACTAATCTTACTTCTTAGCATTCAAATTCTACCAAA CTCATAAACAATCATAACTTTAATCTCTTAGTCTTAAGTCTTACACTTTC CAAGCTTGTACACACTTATCACCCCTTTTCTTTTAAGCCCTTTGATTTTA ATATTTATCAATTATTTTATTAAACAATCTTGTATTTTATATGTAGCGAA AATTTGGCCTTCGGGCCTGATGTTACTTAAATATATAGATAGATAGATTA TACATAGCTATAGTTTGATCTTCTTGATACATGTATAAACCCAGAAAACC CAGGTAGACCAAAGCTTTCCCGACTAATGAAATAATGATCAAAGCAGATT TATTCTACCAGTTTAAGACTTTAGCCCCTCCATCATGTTCGTGTCCACTT TTTACAAGTTATGTGCCTAATGTTGTTGTGCTTTTTGGCCCAGCGTAGCG AAAAGGGCCTTTCAAATAGAAGTGTCTGTGGTTTGTGGTTTGTGGTTCGG TTCGCCAAAAGTTTGCGATAACAGCGTCTTGTTTTTTTTTCAATTTCATA ACTCTTGATAGACGGTGATATACTCTTTCGGTAATGGTTCTTTCAAAGTA AACAAGGGACGGCGCACAATATGAGCATATTTATTTTTCTTATAAGCATA TACTTTATAAGAATCAAATCAATAACTCTTGATAGACGTTGCANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCATTAACTT ATGATAGACGTTGCAATGGCTTTTAAATAACCTTCAGTGAATTTACTGAA TTTATGAATACTGTCATGACCAATTTTGTTAATTTCAAACCTTTCTATAA GAGTCTAACTTCCTCGGTGATTTTAGTTTTCAACCTCATCAAGGACAGCC TCTTCTTCTGCCTACATATTCATAATTTTAAGTTGCTGGGCCTTCACGCC CCACGGGCTTCTTGTTATGTCTATTGATCACCTGGGGGCAAGGTTTTAAA CCCTTGTACTTTTAGAATTAAAAATGTGTTTATTTCTTTGTTAGTAATTT GTTAATGTCTCATTTCTTTTTTTTTATTTGTTTCTTTGTTTATTTTGTTT GGTTGATTGTTTATTTATTTTCTTTATTGTCATTGCTGTTGTTTTCTTTA TCTCGTCTTTGTTCTTTGCTGGTCCTATGTTTGTGTTTTTTCTTACAGTT GATTCTGTCTAGTTCGATATTTAGAAGGGACCAATGATTTTCTTCGAACT AGCGAAAGGTTCGAAAAGCTTTTTGACTCTCTTTCCATCTAACAAATAGG GATGCACCAATAGGGCATGGAAATCTCTTATTTTGGATAATCCAAGGCCT TTTTTGATAATAAACCTTAAATTTCTGTAAATTTTAGGCTATCAACTCAC AAACATTTTTTACTTCTGCCGGGGTTGCGACACCAATAATATTTTCATAT TTTTGTGCTTCCGACAGGAGTGGAAAACAAGTATAGTGACTGCTATCTGA CTATTACGGAGCTTCTTTCTTTCCGTTACATATATAAAAGCAAAAAATTA ACTTTGGGAACGCAGTCAGAAGTGAAACAAAGGATCCTTAACTATCTAAC TGCTGGTAGGGGAGGGAGGGGACACTCTTTAACACTAGATTTATGGAGCC ACTCTTTAATGAATGCAGTGACAAACTAACATTTTCATTCATTTTCGATC TATCTTGATATGTTTCTATCTTCTCTTTTCTTTTAATTTGGAAAGATTAT GCTATAGATTATACCTATACTTTTTAAAGTCTAATGCTCAAGGTTTTGCA CATTATAACCGTGTATGTTGATAGAATAAACTACTCTCCTGCACGGTTAC TTCTTTTAATAACATATGATTTATGTAACTAGCCATATAAAAACCTTGTT CAATCAAAAATTCACTGATACTTGTTTTATCATTTCAGTCAACGCGTTCA GTCACGATGCTGTAAGGGACCATCTGCTACCTGCGACAAGACCTCTCCTT CATGTACACGCACAGCCACAGCTGAGACTACCAACAGTCAAAAATCGGTC GAAACTTATAATGCTCCCGCGACATCCATCGTTAAGATGCAAGACTTTGA GTCCGATCTAGCTGAAATGGCTACTAAAGACTCGGGATGTTGTCCCTGTG CTGGTCAATCAGCGGCGTCCCCACCTTGTCAATCAGCAGCCGGAAGTGTT GCTTCGGAAGTATCAACAACATGTGCTTCTAAGAAAAAGTCATCCGTTGC TGCGGCGCTTATCGAGGCACCTTCTAAAAAAGATTCGGTTGCCGTGAAAA AGTCATCCATTCAGGTAGCGAAGAAACAAAGTAGCGTTGCTGCTGCTAAA AAATCTTCAATCAAGACTGAGCGTAAATCAAGCACAAAAGCTCGTGTACT AAGCGGCACTGCTACTCGATCCACCGCTTCTGTTGAGAAACAAGCGAGTC CTGCTGCATCTAAGACCACTACCAAGGTGAGCCAAGCTAAGGTTACGTCG TCAGTTTGTTCGCGTAAGAGCTCCGTAATGGCGAAAACTGCTTCCGTACA GTCCCGTAAATCAGACATCACGTCTGCACGCAGCAAAGCCTCGACTGTAA GTCGAAAGCAACCACCCACGCCAAATACAAGCGTCCAATCAGTCCGTTCA GTCAAGGATAAGATGTCCGCCCAAGACACCGCCCAGCTTCTCGCAAAGGC ATCTAGCCGACTAGTAGAAGATGCTTTGAAAAATGTGTCATCCAAAACTC AAGAGGAATGTAAATTTGAAGAGGATGCTGTAATCGTTGAAGCAGACATC TCGTGCCCTCAGATTGTTGCAAAGACTTCAGCCCTTGCTGAGAGTCCTGC CACAGAAGCAACCCACACTGAGGTCCCTGAACCAGTTACCGACAGCCAAG AGCAGGCCATCGAACCTAAGGAAGCTACACAAGAGGCTTCTCCTGAACCA GCTGCAGATGGCCAAGAGCTTGCCAAACCAATTGAAGCTAAGACCGAATC TGCCGCCGCTGTTTCTACTGAACCAGCTAAAATGACTTCCTCAGCACAAG CTGTTGAAACTACACAAGATTCACCTACCGAAGCCAGCCAAGTGTCTGAA TCTGTTCCTGAGCCTGCTGCTGAAACTGTCTCAGCTGAGGCTGAACCTAA AGTCGTTGAGGCTACTGAACCCGATTCTGAGGCTTCCTCAGAGCCAGCAG CTCCTGCTGAAACTACTGAAGCAGCCCCTGAACCCCAAGAAGCAAGCCAA GAGACTGCTATTGAATCAGAAGCCAATGCTGAATCTAACCCCTCAGTACC AGCTTCTGCTGAAGTCAGTCAGGAACAACAAGCTGACGGTACCCAGGCCG ATAAGCCATCTGAGACTCCCGTGGCTCAAGAGGAACCAGCCGATGAATCG GTTCCCGAATCCACCCAAGAACCGACTGCTGAGAATGTAGAAGCCCCATT AGAAACATCAGTGGAAGCTTCCCAAGAACCAGCAGCTAACTCTGAACCAT CCACTGATGGTGTACCTGAAACCTCTGGTGATGTTGAAGAGTCTGTATTA GAAACAGTGGGGGCCATCCCTGCTGAAGCTACTCAAGAACCATCTGCTTC TGAACCAGCTGCCGCCCCATCCATACAGGAGGCTTCTCCTGAACTGGCTA CTGACGGTCAAGAGCAAGCTTCTGCCCCTGTTGAAGCTACCAAGGAACCA TTTGCACAGGAAGCTGCCCAAGAGCCAACTGCCCCGCAACCCTCCCCTGA ATCAGAGGCTACTGAAGCTAACCAAGAACCAGAAGCTACTGCTGAAGCCA GTCAGGAGCAACTAGCTGATGCTAACCAGGCTGATACCCCACCTGAGACC GCTCAAGTGACAACTGAAGCTGCCTCGCAAGAACCAGCCCCTGTCAGTGC TGGATCAGCATAAATCGCCCCCCCCCAGAACCCTTTGTACTTTAAAGATT TGAATCATTTGAAGAAATATAAACAGAAAGAAAAT

Coding sequence (CDS) from alignment at scaffold_443:112486..117170-

>TCONS_00065714 ID=TCONS_00065714|Name=TCONS_00065714|organism=Clytia hemisphaerica|type=CDS|length=4500bp|location=Sequence derived from alignment at scaffold_443:112486..117170- (Clytia hemisphaerica)
TCAACGCGTTCAGTCACGATGCTGTAAGGGACCATCTGCTACCTGCGACA
AGACCTCTCCTTCATGTACACGCACAGCCACAGCTGAGACTACCAACAGT
CAAAAATCGGTCGAAACTTATAATGCTCCCGCGACATCCATCGTTAAGAT
GCAAGACTTTGAGTCCGATCTAGCTGAAATGGCTACTAAAGACTCGGGAT
GTTGTCCCTGTGCTGGTCAATCAGCGGCGTCCCCACCTTGTCAATCAGCA
GCCGGAAGTGTTGCTTCGGAAGTATCAACAACATGTGCTTCTAAGAAAAA
GTCATCCGTTGCTGCGGCGCTTATCGAGGCACCTTCTAAAAAAGATTCGG
TTGCCGTGAAAAAGTCATCCATTCAGGTAGCGAAGAAACAAAGTAGCGTT
GCTGCTGCTAAAAAATCTTCAATCAAGACTGAGCGTAAATCAAGCACAAA
AGCTCGTGTACTAAGCGGCACTGCTACTCGATCCACCGCTTCTGTTGAGA
AACAAGCGAGTCCTGCTGCATCTAAGACCACTACCAAGGTGAGCCAAGCT
AAGGTTACGTCGTCAGTTTGTTCGCGTAAGAGCTCCGTAATGGCGAAAAC
TGCTTCCGTACAGTCCCGTAAATCAGACATCACGTCTGCACGCAGCAAAG
CCTCGACTGTAAGTCGAAAGCAACCACCCACGCCAAATACAAGCGTCCAA
TCAGTCCGTTCAGTCAAGGATAAGATGTCCGCCCAAGACACCGCCCAGCT
TCTCGCAAAGGCATCTAGCCGACTAGTAGAAGATGCTTTGAAAAATGTGT
CATCCAAAACTCAAGAGGAATGTAAATTTGAAGAGGATGCTGTAATCGTT
GAAGCAGACATCTCGTGCCCTCAGATTGTTGCAAAGACTTCAGCCCTTGC
TGAGAGTCCTGCCACAGAAGCAACCCACACTGAGGTCCCTGAACCAGTTA
CCGACAGCCAAGAGCAGGCCATCGAACCTAAGGAAGCTACACAAGAGGCT
TCTCCTGAACCAGCTGCAGATGGCCAAGAGCTTGCCAAACCAATTGAAGC
TAAGACCGAATCTGCCGCCGCTGTTTCTACTGAACCAGCTAAAATGACTT
CCTCAGCACAAGCTGTTGAAACTACACAAGATTCACCTACCGAAGCCAGC
CAAGTGTCTGAATCTGTTCCTGAGCCTGCTGCTGAAACTGTCTCAGCTGA
GGCTGAACCTAAAGTCGTTGAGGCTACTGAACCCGATTCTGAGGCTTCCT
CAGAGCCAGCAGCTCCTGCTGAAACTACTGAAGCAGCCCCTGAACCCCAA
GAAGCAAGCCAAGAGACTGCTATTGAATCAGAAGCCAATGCTGAATCTAA
CCCCTCAGTACCAGCTTCTGCTGAAGTCAGTCAGGAACAACAAGCTGACG
GTACCCAGGCCGATAAGCCATCTGAGACTCCCGTGGCTCAAGAGGAACCA
GCCGATGAATCGGTTCCCGAATCCACCCAAGAACCGACTGCTGAGAATGT
AGAAGCCCCATTAGAAACATCAGTGGAAGCTTCCCAAGAACCAGCAGCTA
ACTCTGAACCATCCACTGATGGTGTACCTGAAACCTCTGGTGATGTTGAA
GAGTCTGTATTAGAAACAGTGGGGGCCATCCCTGCTGAAGCTACTCAAGA
ACCATCTGCTTCTGAACCAGCTGCCGCCCCATCCATACAGGAGGCTTCTC
CTGAACTGGCTACTGACGGTCAAGAGCAAGCTTCTGCCCCTGTTGAAGCT
ACCAAGGAACCATTTGCACAGGAAGCTGCCCAAGAGCCAACTGCCCCGCA
ACCCTCCCCTGAATCAGAGGCTACTGAAGCTAACCAAGAACCAGAAGCTA
CTGCTGAAGCCAGTCAGGAGCAACTAGCTGATGCTAACCAGGCTGATACC
CCACCTGAGACCGCTCAAGTGACAACTGAAGCTGCCTCGCAAGAACCAGC
CCCTGTCAGTGCTGGATCAGCATAAAGTTTGCAGACTGACAAATCTTTCT
CTGGGTTTCTTCACTCAACCAACCAACACACATCTTCGCACAGCAAATTT
TTTGTTTTGTTTACTTTCACACAAACAAATTTTGTTTACTTTCACACAAA
CATAACAAATATGAGAAACACAAGCGCCGCACAAAACAAAAAAACATTGG
TTATCCCTTCCGGCTTTCAAGCCATGTTGGAAGCATTGGCTCGCGACGTC
CTTATTCAGCAACCGGCCGACGTCGAAGAATTTGCTGCGACTTTCTTCAG
TCAACGCGTTCAGTCACGATGCTGTAAGGGACCATCTGCTACCTGCGACA
AGACCTCTCCTTCATGTACACGCACAGCCACAGCTGAGACTACCAACAGT
CAAAAATCGGTCGAAACTTATAATGCTCCCGCGACATCCATCGTTAAGAT
GCAAGACTTTGAGTCCGATCTAGCTGAAATGGCTACTAAAGACTCGGGAT
GTTGTCCCTGTGCTGGTCAATCAGCGGCGTCCCCACCTTGTCAATCAGCA
GCCGGAAGTGTTGCTTCGGAAGTATCAACAACATGTGCTTCTAAGAAAAA
GTCATCCGTTGCTGCGGCGCTTATCGAGGCACCTTCTAAAAAAGATTCGG
TTGCCGTGAAAAAGTCATCCATTCAGGTAGCGAAGAAACAAAGTAGCGTT
GCTGCTGCTAAAAAATCTTCAATCAAGACTGAGCGTAAATCAAGCACAAA
AGCTCGTGTACTAAGCGGCACTGCTACTCGATCCACCGCTTCTGTTGAGA
AACAAGCGAGTCCTGCTGCATCTAAGACCACTACCAAGGTGAGCCAAGCT
AAGGTTACGTCGTCAGTTTGTTCGCGTAAGAGCTCCGTAATGGCGAAAAC
TGCTTCCGTACAGTCCCGTAAATCAGACATCACGTCTGCACGCAGCAAAG
CCTCGACTGTAAGTCGAAAGCAACCACCCACGCCAAATACAAGCGTCCAA
TCAGTCCGTTCAGTCAAGGATAAGATGTCCGCCCAAGACACCGCCCAGCT
TCTCGCAAAGGCATCTAGCCGACTAGTAGAAGATGCTTTGAAAAATGTGT
CATCCAAAACTCAAGAGGAATGTAAATTTGAAGAGGATGCTGTAATCGTT
GAAGCAGACATCTCGTGCCCTCAGATTGTTGCAAAGACTTCAGCCCTTGC
TGAGAGTCCTGCCACAGAAGCAACCCACACTGAGGTCCCTGAACCAGTTA
CCGACAGCCAAGAGCAGGCCATCGAACCTAAGGAAGCTACACAAGAGGCT
TCTCCTGAACCAGCTGCAGATGGCCAAGAGCTTGCCAAACCAATTGAAGC
TAAGACCGAATCTGCCGCCGCTGTTTCTACTGAACCAGCTAAAATGACTT
CCTCAGCACAAGCTGTTGAAACTACACAAGATTCACCTACCGAAGCCAGC
CAAGTGTCTGAATCTGTTCCTGAGCCTGCTGCTGAAACTGTCTCAGCTGA
GGCTGAACCTAAAGTCGTTGAGGCTACTGAACCCGATTCTGAGGCTTCCT
CAGAGCCAGCAGCTCCTGCTGAAACTACTGAAGCAGCCCCTGAACCCCAA
GAAGCAAGCCAAGAGACTGCTATTGAATCAGAAGCCAATGCTGAATCTAA
CCCCTCAGTACCAGCTTCTGCTGAAGTCAGTCAGGAACAACAAGCTGACG
GTACCCAGGCCGATAAGCCATCTGAGACTCCCGTGGCTCAAGAGGAACCA
GCCGATGAATCGGTTCCCGAATCCACCCAAGAACCGACTGCTGAGAATGT
AGAAGCCCCATTAGAAACATCAGTGGAAGCTTCCCAAGAACCAGCAGCTA
ACTCTGAACCATCCACTGATGGTGTACCTGAAACCTCTGGTGATGTTGAA
GAGTCTGTATTAGAAACAGTGGGGGCCATCCCTGCTGAAGCTACTCAAGA
ACCATCTGCTTCTGAACCAGCTGCCGCCCCATCCATACAGGAGGCTTCTC
CTGAACTGGCTACTGACGGTCAAGAGCAAGCTTCTGCCCCTGTTGAAGCT
ACCAAGGAACCATTTGCACAGGAAGCTGCCCAAGAGCCAACTGCCCCGCA
ACCCTCCCCTGAATCAGAGGCTACTGAAGCTAACCAAGAACCAGAAGCTA
CTGCTGAAGCCAGTCAGGAGCAACTAGCTGATGCTAACCAGGCTGATACC
CCACCTGAGACCGCTCAAGTGACAACTGAAGCTGCCTCGCAAGAACCAGC
CCCTGTCAGTGCTGGATCAGCATAAAGTTTGCAGACTGACAAATCTTTCT
CTGGGTTTCTTCACTCAACCAACCAACACACATCTTCGCACAGCAAATTT
TTTGTTTTGTTTACTTTCACACAAACAAATTTTGTTTACTTTCACACAAA
CATAACAAATATGAGAAACACAAGCGCCGCACAAAACAAAAAAACATTGG
TTATCCCTTCCGGCTTTCAAGCCATGTTGGAAGCATTGGCTCGCGACGTC
CTTATTCAGCAACCGGCCGACGTCGAAGAATTTGCTGCGACTTTCTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041170XLOC_041170Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065714-proteinTCONS_00065714-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065714-exon-scaffold_443-1575043694:116894..117170TCONS_00065714-exon-scaffold_443-1575043694:116894..117170Clytia hemisphaericaexon
TCONS_00065714-exon-scaffold_443-1575043694:112486..114532TCONS_00065714-exon-scaffold_443-1575043694:112486..114532Clytia hemisphaericaexon
TCONS_00065714-exon-scaffold_443-1510915933:116894..117170TCONS_00065714-exon-scaffold_443-1510915933:116894..117170Clytia hemisphaericaexon
TCONS_00065714-exon-scaffold_443-1510915933:112486..114532TCONS_00065714-exon-scaffold_443-1510915933:112486..114532Clytia hemisphaericaexon
TCONS_00065714-exon-scaffold_443-1491911889:116894..117170TCONS_00065714-exon-scaffold_443-1491911889:116894..117170Clytia hemisphaericaexon
TCONS_00065714-exon-scaffold_443-1491911889:112486..114532TCONS_00065714-exon-scaffold_443-1491911889:112486..114532Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_443supercontigscaffold_443:112486..117170 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.436133 0.474371 0.778704 0.5017 0.294075 0.393262 0.237227 0.444178 0.310979 0.367689 0.169947 0.189918 0.4574 0.556114 0.400051 0.78708 0.428143 0.49046 0.570608 0.503803 0.194621 0.474646 0.115399 0.2448 4.44844 5.65783 0.345014 0.27002 0.242037 0.132783
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003117cAMP_dep_PK_reg_su_I/II_a/b
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065714 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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