TCONS_00065686 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065686
Unique NameTCONS_00065686
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length104

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065686 ID=TCONS_00065686|Name=TCONS_00065686|organism=Clytia hemisphaerica|type=transcript|length=104bp
AAATATCGCACAAAAGTTCTTGAAGTTGATCGACAAACACTTTCCTCGTC
ATCATAAATACCACAAGCTGTTCAATCGAAATACAGTCAAAGTTAGCTAT
AGCN
Run BLAST on NCBI

transcript from alignment at scaffold_442:10631..10734

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065686 ID=TCONS_00065686|Name=TCONS_00065686|organism=Clytia hemisphaerica|type=transcript|length=104bp|location=Sequence derived from alignment at scaffold_442:10631..10734 (Clytia hemisphaerica)
NGCTATAGCTAACTTTGACTGTATTTCGATTGAACAGCTTGTGGTATTTA
TGATGACGAGGAAAGTGTTTGTCGATCAACTTCAAGAACTTTTGTGCGAT
ATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041152XLOC_041152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065686-exon-scaffold_442-1491911889:10631..10734TCONS_00065686-exon-scaffold_442-1491911889:10631..10734Clytia hemisphaericaexon
TCONS_00065686-exon-scaffold_442-1510915933:10631..10734TCONS_00065686-exon-scaffold_442-1510915933:10631..10734Clytia hemisphaericaexon
TCONS_00065686-exon-scaffold_442-1575043694:10631..10734TCONS_00065686-exon-scaffold_442-1575043694:10631..10734Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_442supercontigscaffold_442:10631..10734 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065686 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top