TCONS_00065669 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065669
Unique NameTCONS_00065669
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1571

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065669 ID=TCONS_00065669|Name=TCONS_00065669|organism=Clytia hemisphaerica|type=transcript|length=1571bp
GCTTTTTCATGTTGTACAATTTGTATGTCTTTATGTGTGTAACTACCTGT
GCGTTTGATGATTGATGGGAATTATGTCTGACTTGGAAGAAGTTAAAAAG
CAGATCGGATTAGAAGGCAGCATATCCGACATTTTCGAACAATTTGGTGC
TGGAAACACAGGCAAAATCTCTTACAAACAATTCTGTGAAAACAGTCAAA
TTCTGTTCGGTGATCAAGTCTATAGTTCCGAATCTTCACCAGAATATTGT
AGTACTGATTCTGAAACAGCAGCCAAAGAATTACAACAACAACAGAAGCA
ACTGATACACCAACAGAAACAAAAGCAACAGGTGGCCAGTAAAAGACCAA
TGGCCTCTGAGAAAGGCCGTGGGAAGGAAGATGTCAGAAAAGaaaaacga
TTTGCGGACCACGACACAACAGACTTGGATGAAGAGCTGAAAGCCAGCGG
TGATAAAATCAAACAGATTGCCGAATCTTTCGCACTCGATCCACATTACA
ACCCTCACCGAAAGAGTGGGGGTGGTTTCGAAGATTACCTCGATGAAAAG
ACACTAGCACGTTTAGAAGAATTGAAGATTATTCCCAATCAACCGATATC
GGAAAAACCTTCATACGCCGTCCATCATGCTTCTATTTCACACTCACGGC
AGCCGAAAGATGATTTCGCTAGTGCATCTAGTGGTCCAGACTATTTGGAG
ATCTCCAAAAAGCTCCACTTGGCAGCGTTGACATCGTACAAGAACGAGAT
CTACGAACTAAACACACGTTTACACAAAACACGAGGTGAGAGAGACCACT
TACGCAAACAACAGTCATTATGGAGCATCGAAAAACAGAAAATGCAAAAA
GACTTCGAAGAACGGCTTCAATCGCAGACAATGCGTATAACAGAACTACA
AAGTGTGATAGCGGAACTCACGCGCAAGTTGAACGCGGCGAACGACAACA
AAAtcattgaagaagaagaagaagacttTGAAGAAAATGACGAAGACGAA
GACGAAGACGCGAGGTCCAGATTCACATCGGACATTGAAAACCAAGGTTC
TCGCGCATGCTCAGAATGTTCAAGCGAACACTGCGACTGTCAAAACCACC
TTGACATTGAAGGTCCGAATCAAGTTAATCTTCTTGCAACTACTAAAGAT
CTTATTCGAACGCCACGCGCCCCTAATCAAGATGGGGAGGAACTACCGAC
GCCCGAGAGCGCCCAAGATAACAACGACCTGACGGTGCAACTACATCGTG
TGCTGGGAGCCTTAGAATCGAACATCGAGTTACGAAAACAGAATAAACCT
AACACTGATGCCACTGGCGAGCGGTCGAACGTCTCCAACGCAGCGGACGC
GAGCGAAGTGGATTTGGAAAGTAACTTCTTGGGTGAAGCTCGAGAGgaaT
TCGTGAATCCGTCCTCGTTGCTCAGCCCAGACTCCATGATGAGCGGTGGA
CCACAAATCACGGAGATGCTGAAGCAAATCGACAACCTTCGCAAAGAGAA
ACGAGATTGTAAGTTTTATTATCCACCATAAGAATGATTAGATTCGTCTC
TCACCCCTTTTATACACGTGT
Run BLAST on NCBI

transcript from alignment at scaffold_442:145868..161742+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065669 ID=TCONS_00065669|Name=TCONS_00065669|organism=Clytia hemisphaerica|type=transcript|length=15875bp|location=Sequence derived from alignment at scaffold_442:145868..161742+ (Clytia hemisphaerica)
GCTTTTTCATGTTGTACAATTTGTATGTCTTTATGTGTGTAACTACCTGT
GCGTTTGATGATTGATGGGAATTATGTAAGAATTTCCtttcattttgaaa
agcttAGAAAACTTTAAAAGTATGATATCTAAATAATTTAGCAAATTGGA
CATTTATCGAATGAATCATTGAAGAGAGGACAGAGTCGATGAAATTGAGT
TATTGGAGGGTTGGATTTACTGTCTATTTCAAATCTGGCTTTGAGTTGTT
TTTGAGATAAGGATATGAAATGTTTGTGAAATATACAATTCTTTCGAGAG
AGATTTTCTCATCCCTTGGCAGTTATATGTTTATTGTACTTTGATGTGAA
TGAGAgtctttcttttacttttatagGTCTGACTTGGAAGAAGTTAAAAA
GCAGATCGGATTAGAAGGCAGCATATCCGACATTTTCGAACAATTTGGTG
CTGGAAACACAGGCAAAATCTCTTACAAACAATTCTGTGAAAACAGTCAA
ATTCTGTTCGGTGATCAAGTCTATAGTTCCGAATCTTCACCAGAATATTG
TAGTACTGATTCTGAAACAGCAGCCAAAGAATTACAACAACAACAGAAGC
AACTGATACACCAACAGAAACAAAAGCAACAGGTGGCCAGTAAAAGACCA
ATGGCCTCTGAGAAAGGCCGTGGGAAGGAAGATGTCAGAAAAGGTTTGTT
TTCCTATTTACTTATATTGTATTATTCCTCTGGTGGTAGAATCTTGTTCT
TATGCTTGATTTTCCTGTTTTCATACCCTTATCAGTTTATGTTAtattac
tttttggacctaccccggtggggtggaggtcctataaattaacccatgtt
cgttagttagttagttagttagttaccagcttttctcgagattggctcat
tagttttttctgatttttggcacaaaggtgcatgaccataaaccctcgaa
tgtgacggagccggattttcgaaaaaaaatttttttgggcaaatttgggt
caaaaaacggcttaaaaacgggttttttggactttgtgaaaaattggatc
attaattttttctgatttttagcatgaaagtagggtacaatgatagttaa
aagatggcttaagcagatttttgcaaaaaaatttttttggctgaaaaacg
aatctttatctataagaatcactattttatgagcatagatcaatgttatt
agccaaattattttttattattattttttctaacagaagaaaatgtcacg
gtagagtgcgacggtttgagttttctggaaaccttatttattaagctgtg
catttttctgatagtggtttttataaagaaaagcgcttaaaagctttttt
atttctttttcaaaaatctttttcaatagtgtaTGATAGTTTCTCTCAAT
AGATATGCTTTCATTTTCTTTATttttttgtattttgaccagttatgtct
tatgtgtttcattgtttcaatgttcactgattagtttgataaccaggtag
gtccataaaagtatcgcttgtttcaTGTCTTTCCGACGTAAATTTCCTCG
TAGTTTAGTATTTTCTTTGTAGAATATGTTTATGACGGGCACTTTTTCAC
CAAGGAAGTTCCTTGTCATATGTAAATTGATCAGATTTTTTAAGAGACGT
TTCCATTTGGATAGTGCACTATAAACTATACCATTTTAATTCCGTTATAA
AAAGTTCCGTTTTATGTGTAATTCATGACCGAGGGAAAAATTACCCgaga
ttttcaaaatcaagtattgtttgtttttgtttgtttgcgAGTCGAGTCTG
TGCTTGCTTTATTTGTTTACTGATAGTTACAATGGTCGTTCTAAACTTAG
TGTTCCCTTTGTTTTTGATCTCATTTGTAACATTTCTTTATAATAATAGG
TATAGAGCTTTGAAATCTGACCTTTTTTGCTTTTGGAATCATCACTCGGC
ATTCAAATAgttctttttaaagattttgtttttctttacacTAAcattgt
aatttccctcctcaAGTTAATGTCACTTGAGATTTAAACATGTCtaactt
tttgttttggttttaatGCGAAGTATTTGTTCTTTGACAGACCCTTGTCA
AATTTTTGAACCTCTTCTTTGATGGAATGTCAACAATCTTTTGCATGAAT
GAATTGAAGCTTTCCCTAAAGTATACTTTATTGAAATGGCAGATGCAGAT
TTGCCCTTAGAAAACatcttgatttttcttttagagATATGACCGTAGTA
AGTCGTAATTCGCAGTTTTAACGatgataagaaaaaataacaatattttt
gagtaatttggaCTTTCGTTTCGATTCGTGACTGAACCACAGAGGAAGGA
AATACTTCATTGATTTCTcgtctttatatatttttagaaaaacgaTTTGC
GGACCACGACACAACAGACTTGGATGAAGAGCTGAAAGCCAGCGGTGATA
AAATCAAACAGATTGCCGAATCTTTCGCACTCGATCCACATTACAACCCT
CACCGAAAGAGTGGGGGTGGTTTCGAAGATTACCTCGATGAAAAGGTGGG
TGAAAGCACCCGTACACACTAAATAGGCTAACTACACACAATTTTCCCCG
TAAAAGTGTACCCAGTTTTGAAGTCAACTAGTCCGCCGTGTGGTTCTGTA
ATTTgagtttcaaaacattcgaattgcaCTGTTGAcgaattgaaaaaaag
atgTTGGACTAGCTAGATCTAAAAATGGACACGCTTCCTTTATGGGAAGG
CAAATCTAGTCATCTAGTCTATACAGCCTAGAGTAGTTGGTTTTTCAAAC
GGAAGCCAGAATCTGTATTTTGCCTAACACGGAGCAAAAGTCCTTTTATG
TGTTATCTATCTCGCCNCCTAGAGTAGTTGGTTTTTCAAACGGAAGCCAG
AATCTGTATTTTGCCTAACACGGAGCAAAAGTCTTTTTATGTGTTATCTA
TCTCGCTTTTTGCGTCACTCATCGAACTACAATGATCATTATTTATGTAC
TAGCGGCTTTTCCGCCCTCCAACTAATGAATAGAACCTCCTTTTAAACCT
ACTCTTCAGTGCAAACCTTAACTTGTGACTCATTTTTTTAGACACTAGCA
CGTTTAGAAGAATTGAAGATTATTCCCAATCAACCGATATCGGAAAAACC
TTCATACGCCGTCCATCATGCTTCTATTTCACACTCACGGCAGCCGAAAG
ATGATTTCGCTAGTGCATCTAGTGGTCCAGACTATTTGGAGATCTCCAAA
AAGGTATGGAtattgtttttaacttttatatATTAGTATGATGTTGTCCA
GGTATAATTCATATCACAGGATACCTTCTAGTAAATTTAGCTTATGATTA
TACATCATCCTTGAAGCCAAGGTTCGGACTTCTTAGTCATGACCAGTTTC
AATCAGACTTGTTATACAATTTAGAGATTCCTCAAGAAAGTTAATGTTTG
ACTAGACCATGGTATTTGTGACGATGAATGATTGTGTAGTAAACGAAGTA
AACAAGTCGAGTGTGAGGTCATTTTTCGATAAagctttttatcattttga
atCGGCACGTCGATACGCTTGTTACTATAGAAACAGTGTGGTGGGTTCTT
TTCTCAAACAGCTGCAGACATTTAATCAATGACTTGTCAAAAGGGGAGGg
aagtcaatcatttttatctaTTGCTACACTTTTGTATAAGTTTTGATAAG
ACAAATCGTTGACATCTTATGATATTGTATTATTGCTACGGCAAACGATA
TATCAATCAAACATGTTTTCAGAACTGCAAGATTTTGCACATTTGGTCTG
CCTTTATTCTATGCCAAAATTCTCTGAAAACTCTGATCACTTAAAAAACA
ACTACTAATATAGACATAATTATAGCTTTGGAAGGAGCCTCATTACAACA
TCAAGTACAGTACCCtttcattaaaatatcattAGCAAAGAGCGTTTTAT
ATTTCCAAGATATTTCCAAAGGTCGTTAAAATGGTTCTACAGTTTAAATC
ACCGAGCGTGGGCTACAAACACCTCTCTGTTATCCCAATATCATGAAATA
AATGGAAAGTAAATTATCATGAATTCTTTTAAAAGGTTTTGACAGAACCC
TTGACAAGAATGATATCCCTTGTCAAtttccttttaatcataatgatCAG
ATCATCTCAATAATTCCATTAAAAGAAATTTCGTGTTCGAATCCGACTTC
TTGTTTCCTGGTTGATCATGTCGCCTCTTGATTAGTATTCAGACTTTTTA
ATTGTTGAAGGAAATTAATTTTAGTATTTTATCTTTTGAGTTATTTTAAC
CAAATTTAAGCCAGCCCTTTGGTTAAAAATGACGTCAGTCCCAGAATAAG
CCAATAGAATGTTTTGATCATGTTCAAAGAAACATATTTTTGGTTCATTC
CTTAAATTTTCAGAAGTCGTAAGATATATCGATGCAGACAAACATTTTAT
CTTTGAAAACTTGGAAAACGAAATCGTAGTGTGGTTGGCTGAACAGAAAT
CACAGTTAAAGTCGTTTCTCTTAAACttccttttaaaaatctttgaaaat
gtcGGCTATTCCCGAAACGAAATCCTTGAAATTCTGCGGTCGAAACGAGA
AGGGGCGTGAACAGTATAAAGGAGTGGTCCAACATAAAAATACTTCTCAT
ATTTCTAACCTGatttttttagcatttaaaAGGTATTCAGTAATAATGTG
TTGTGATGTAGTCAGACATCTTTTTCCCAATTGGTTTGCAAAAATTTGTA
TTTCCCCGTATTTTACTGTAAATATTTCCCATCCCGACAAGTCTGATACC
CTGAGGATTTTACACTGTCAGTGTCTACGAATTattaaattaactttttt
gaatcTTCATTATGCAAGCACAAATGACCCTTCCGCTTAGCCTATTTact
tatataaaaacaaaatgttcGCTCTTAGACATCTCTCTAACATTAAAGGC
GTCTCGAAGCTATTGGTTTCAAAATGGCGCTCAAGAGAAGTTTGTTTTGA
ACTTATAATTGTGTTATAATTAGTGATGAGATGTTATCGGGCTTGTCAAT
TTCATATGATTTGGTAATCTACTTTTCGTACAACCCTTGTCTTTCTCTGC
TGTCATATATTATCAAAACATGGTGTGTCATGAAGGCTTTGTTTTTGCCA
ACCAAGCTCAACGCTTGCTAATGCTTCCTACTCGATGTCTTTAAAATAGC
TATTCGATTGCAAAAAGACATCGAGGTATGAAGCAAGCGAAATGCAAAGA
CTGGCGTCTCTCCTTTCAAATCTTTGTGCAGTCTAATGCTTTGCTTCTCA
GTACTTAAAAAGCAACTGTTTGAAATGTCCGGAATGCTCTCTCTCTCTTC
TAAATCGAATATCTTCCACTGTAATACTCTTTCTTTTAATCTTTATGATG
ATATCTAACGATTTATTCCCATACTTTTAAATGTAGATTTTTGATACTTT
AGACTTTGTCAATGAAACTCTTTTAAGGCGGGTCGAGGGTCAGCTTATCA
GCTCTTTGGCTTCTAAGATTGGATGGTTTGGCGTAAGAAAGTATACAGTA
TGATGTTATTCTGGATGTTTTGTTAGAGAAGGTCCGAAAAATGAATCAAC
TGTAGAATTTTGATGCATTAGATGACAGATGGATGAGGTTTGGGCAGAAG
AACTGTTGGATGTCATTGCAGTGTCAATACAAGAAGAGGTTCGATTTACA
TTTCTCCTgctttgttggaaagatattatcGAAAAGTTGACAGTTTTTCA
GCAATAAGTTAGCAAAGGAAATTAAAAACATGTTTCTGATTTTAGATTCG
TTTAGCTTCTCTGATTTCTTTCTATTAGGTAACTATAAATCTTTTTCGGC
CCAAAAGGTACTTTTCTTCCGCTAGAGCTCTTTTACTGTGCAGAAGCTTC
AACTCTTGAAATATAAAGCAATTTTCACTGTATTCTGCAATTCTCAGTTT
TGTTCGAAACAAAAGATACTAGATGGCTgaagaaatatcatattttatta
tttatatgCAAGCTTGAAGACTTGTTTAGTAGGAAGGTTAAAATTTGTCT
TtatataaaatattattatccaataaagaaattttctaTGAGTCACCAAT
TAAACAGTACTTTGACTTGTGTCGAGAAAATAGAGCTTGTATAGAAAGAG
GGGAGCCTAAAAGGAGTGTTTCTCATAGGTGTTGTAGTATAGACAGACAG
ATGAAGCCACCTTGCTCCCTTCGATGTGCTTTGTTACACATCTTCTCCCT
CCTCGTAtgttatttcaaaaagaaataaaaattgatatattcttcagatt
tttttttatttcgatgAAATATTAATTATATTGGCTTGTTTGTTTAGTTT
TAAGCCTTGATTGGATCTCTATGATTGATAGACTTGGATTGAAACTTCCC
CATTTTtcttctcagtttttctttgttttgtttcatccttctaaacaaaa
aagcaaaagGTGGACTCTATCTTTTTGAGAGATAACGTAATCCCCACCTG
CTAGTCTAGTTCATGTATATTTTATGAGTTTTACTTCATATTTATTTTGt
ggttttattatttttattcccCTCACTGTTTCTATTTCTTCATAATTGTT
TCTGTTTCTCTGAAATATCAAGCTTTTTAATAGGTCTACAAGACtagtaa
aattttgtttaaaggGACACAATATATTTTTTGGGGGGGCCCCTTTTAGG
ACCTTACTCACCGTTTTGTAACTTTGGAAGGGAATTTATTTCAAAGTGAT
ATTGGTTTTTGGGGAATTGGACCTTGTGCTGAGGAAAAATAACATTCCAT
AAGGAGATATTAATGCTATTTTGCAGGCTCTTGGtgataaaaatttgata
agCCTAGTATTCCTTAAGACTTTTTGTTGTTAATGGCGAGGTTAATGGAT
GAAACATTCTGGTGTACTTTgcaatttggtttttattgaaCAAATGAGGA
CGACAGTAGTATTGATTAGGCATTCCCTTTCAACTTTGAGATGGCACTTT
GGGAATGAGTTTCTACACGATGGAAATACTCCCAATTTATCTGCTCGACT
TGGTCATGCTATATTGCATGGCTAGATTAAATCCAAGATCATCTCCTTAA
AAATCTGATACTCAAATGATTCatacaaaattttaattatAACGAATTGC
ATGAATTGTTACCAGTTTTTCGAGAtcgccttaaaattttctttatattc
ATCTTGAACCACGAGTTGGCGATTATCCGATCTCAAATGCGTCTTTATCT
AGAAACTCTTGCTTCGAACtctctttatctttttttaatttcgacttttt
gtatctttttaaaTGCAGTGCCATGTTTTTATCTCATTTTCGAATTATCT
TGCCATGATATACATCAAAGTACTTTTGCTTTGCTACATTTTtcgtttaa
tttttaaaatgactTGTTCGAGAGCTTATTGGTCAGGCAAGGCTAAATTT
TGATAAACGTTTGTTTACAGGAAAACTGGTTTTCTAGATGTCTCCCGACA
AATCATATTTTTGAGCGATTCTGCTTTGAGAGGTTCTGCCCGTCCGAAAG
GTTCTGCTCGTGCAATAGGCTGCTGTTAAGattattttgaattgatttat
ttttcaacaaCAATCATCATATTTTTACTCACATAATGTGGCaactataa
atttttttttttgcaaacttttgaaacgaaattttgtttttctagaGTGA
AAGTTGACTCTTGTAATGAGttgtcaaaaagtttgcaaGTGGAGAAATAA
TAGAAACAACCTCGCcctcttttctcttttaaagACCTGTCTACAGACGG
GATAAGAAATGAAAAGTGAGACAAAAAATTGTCAATGTAAACTAAACTGC
TGGTATAGACTCCATGAAGAGTAAAACATACTGTAACTCTGCTATGAATA
TGTGTTTAGCATTTTGCATTTTGGCGGGTCTCGAAATGAGTTGATTCGCA
TTTGCGATACACTTGTACTAGTGTCAGATATGGATGGGGCGTCCTTGATA
TTCCACGATCATGGTTTCAAAAGTTCTTTGGACACTGTCAAAGTTTATGT
CATGAAGTTGAGAATGGTAAGAGAGCGTATACAGAATATTTGGTATATTC
GTTTCTAAAATCTGTGACTCGGGgtacagtagcgtagacaggttAGGCGG
CAAATTtttgtaggagagcagatttatatgacacagtaattactgtgtca
taaaaaccTGCTCTCCTACaaaaattttgcgcccctcctgtctacgctac
ttgGGTATGTCCTTGAAATCATGCTTGGATGATATTTTATGGTTTTCTCT
GATTCAAAATATGACACTTATCCAATAGCCTGATTATTATTTATCTGCGA
GACTTTCATATCGAGCTGAAAATGAAGAATTAACTTAAGTTTGAAGAACT
TGGTTAGCACTCAAAGTTTTCTAATTAACTGGCTGGAAATTTTCATATCC
TGTGTcgagaaaaaaaggaaagtaaAATCTTCGAATTTGTTTTGTAATTC
TGCCCTTGAAATGCTACAGTggtttcaaataattttgattctcGCATCTT
ggttctaattttgattgtttagcACGTCTGAAATAAATGCAGATTTCATC
CGGGAATACAGTACCTGTCCGTTGATGTCCTTGATCCAAGGTGCTGCGTA
GGATAAGAAGTCTTTCTAGTATACATTTTGTGTTCATCATACCTTTTTAC
ACAAAATTAACTAGTCGTGCTATTAAACGCTTATCACCGTATGATGAAAT
TTGTGTTAAATATAACCGTCTAAATTTGAGCCAtggtaaatttcaaaaac
actTCTTCGCGTTAATAAACAGCCGCACTATTTTTACCTGCGTTAAATAC
TTACGTAGTAGGCTTCAACAGTTTTATTGCTTCAACTTGTCGATTCTCAT
TTTTGACACCTTAAATGGTTATCCCAAACTCATGGCTAAAGAAAGCTATC
TGAAGTTTCAAACAGCCATACAGTTAATACATACCTTTTCTTATTAAACT
TAAAGTTTTGAACTTTCAATTAGCAACAAAGCGAACAAATTAACGTACGT
CTCCGAGAGCGTTTAGAAGAAGTGAGTATATAATATATACAGTTAGAAGA
ATGACTCCGAGAGCGTTTAGAAGAAGTGAGTGTATAATAGATACAGTTAG
ACGAATGACTCATCGACTTGATGAGAAAGCAAGACATCCGAGCTTCTGTT
TCCCATCTTTATCAGTTTGAAGTTTCTGCAGACTGAAGTTCTTTGTGTGA
TGTACTCTTGCATTGGTTTAACATGATTCAACAACAACGCAATCAGTCTT
CGAATTTTAAAGTAGATTCTTCcgtttataacttttgataattttcgagA
CTTTATTGTCCTATAACTAATAGTAATTTGTCTTTAACCTCAGCTTCTGA
ATGTTTTGGAAGGAGCTTTCGCGGGTTTCATGATCATAAATAATGCCGGG
AAATCTCTGTCGAACTTTTTTAATTAGTACCAGTAATTGATCGTATAATC
AATTGACCTTTTCCATTTTGTTCAGCTCCACTTGGCAGCGTTGACATCGT
ACAAGAACGAGATCTACGAACTAAACACACGTTTACACAAAACACGAGGT
GAGAGAGACCACTTACGCAAACAACAGTCATTATGGAGCATCGAAAAACA
GAAAATGCAAAAAGACTTCGAAGAACGGCTTCAATCGCAGGTAAGCTCAA
AACTTCATCAGAAATTTACTTCGCTTTTCATGATAATCTTTTACGAATCT
TCATGAGCATACGATTTGATCTTTCCTAACAAATCGgttttttattgaaa
gtttAGGCCTATGAAGTAGGCCAAAACTTCTTCAAACTAGTTGTTGGAGC
AAATCATTCACGGCCATTCTATACATTAGGAGAGACAAATGAAGTATTAT
CTATGGTGCGAACGTGCTCTTTCCAGTACTCTCTTTCCTTTCAGACAATG
CGTATAACAGAACTACAAAGTGTGATAGCGGAACTCACGCGCAAGTTGAA
CGCGGCGAACGACAACAAAAtcattgaagaagaagaagaagacttTGAAG
AAAATGACGAAGACGAAGACGAAGACGCGAGGTCCAGATTCACATCGGAC
ATTGAAAACCAAGGTAAGAGCGCTTCCCTTGAATTTTGTGTGGTCATATC
TTGTTGAAAGTCACAATTTTGGTTTAACCGTAAACTTAAAATCTTGATTT
AGCTCCGACATTGAAATCCACATGAAAAATACTTCTCATATTCGCCTTGA
ATCGGGCCTAACCAAGGTTTAAACTATTCGTGAGGACGGCTCCCTGATAT
TGAAATAAAGAGATAGGTGCTTTCAATTTGATTCGTTTGGGCGTTGGCTT
ATTGTCTCAAACTAAACTTGGTACACGGTTCACTTATTTAAAATagaact
aaaataaaaagacaagATTGCGCGCATTTTTAGTGTTTTAGACGACAAAA
CCGATGCTAAGGATAAAGGAATTAGTCTAACTTCCTTCAATACACATCAA
ATAATCTCAGGTATTTTAAGCATCTTTTAGTTTATGTATCTCAGATAAAG
ACTCTTTACCATCCTTAATCCTCTGAGAAAGATCTTATTTTGACGAGCAC
TGAATGATCTCTTTTTCATCAGCATTGACTCCTTGTCTCAGATTATCCGT
CACCAATCCTGTTTTCTTGAAGCCTATCCGATtatatattttctattttg
ctCCATCAAAGATGTCGGTTCATTTGGGAAATTCTTCAACTGTAAGGAGA
ATATACCTCCAAGGGGAAGTGCTTATCTGAGCCCAGAACGAGCTAGGAAA
AGGCATTGAATCGCTCCAGCGTAGTGTTCTTTTCTTTTGGAGAACGAAAC
CTGTGTTAAAATGGTGCGCAGTTTATGCAGGCGTTGATGTCAATTAGCTG
TGACTTCTAGCTGTTTTTATTCTAAACTCCTATTTTGTTGCGAGATATAT
CATAGCCTGTACAATGAATGCGTTTTATAgctaaactattttttttttac
ttctgctgtctgaatttcttgatttgattattgTCAAGTTGTCAGTTcaa
tcatttaattttttttgctcgaaGAAATTTTTTCCCATGCTAATTTGCTG
TATTGTCGATTGTACTGCGCATAAATGGTTGTTATTCACTGGTATTTGCT
CGATATCTTGAAAAATTGACTTGACATAGATCCTGTTAAAGTTGCCtact
tttatttgaaaattgtgTTTGAAACGGTGGCTTAAAGTGATTTGTCATTG
TTGGATCATTTCTTTGAGACAAAAAAGTTGGATAATCGAAAAAAATTCGT
CAATATAGTTTTGTTCAAGTAGCAGCTTTTGGATAACTAGATTTTATTAA
GACGCATGACGTAATCTCTTTGTGGTTTTGAAAAGATGAGATGTCAACAT
TCATCAATGACTTAGGCTTATCACCACAATCTCGTTCACGCGGCGCCAGT
GCGACGAGTAGACGGTCCTCGTGGCTCGTCGGTGCTGCAACTTGGGCTCG
ACTGAGAAAGACTGTTGGCTCCCTCCAACGAACCTTACAAAGGAGAGGTA
CAATAATGCTTTTGACTGCCATGATGGTCGATCCCGGGCTGATATTGATA
TCTTTTGTTGaaagtttgttttgttgaaattcGACCTTAAGGAAATTTTT
CTTCGGGTTTCCAAAGAGTTTTCAAGCTGAAACCGTCCttgttttaaggg
ctctgaccatagtgaattttgatACTTGTCATGTACAACATATaaatttc
tgcctgatgtagctaacaaaactttgacatggtatacattttctgttagg
ccaactatcctTGAGTCTCATCTCAAttgttcatagaaaaacagctatTA
CTTTTGATACCAATTTAGAAAATtgttccgaaaaatttaaaacagttcaa
ttctttgcggacagtttgaaaaaatttcaaaataaaaaggttaattaccc
attaaaacttagcactttttataaaagaggacgatgcaacatattattaa
cgtctttttaaagttcataacgtcatttttgcaattaaattcttaattac
ttttaaGGGATTTGATCAAAAAAGCAATTTGTAAAGGCAAtgctttgtta
aaagtgtaaaggaacctgaaacataacttttatgctcaaataccaaaatc
aattttttgactatggtcagagcccttaagttcgAATTTCAGAAAGGTTT
GAAGAATGTCTGGAAGTTAGAGAAAATCGGCCTAATTTCTTGCCGTATTA
TTTAACCTTTTATGAGCAGAGTTTATACCTACAAAGGTATAATTTCCAAT
AAATCTGGAATGTCACTTAAACATGAATGATAAATGATGTGATTGTGATT
CATACTGTAACATGATCTACACAGACTTTCTCAGTTTCACAACACAACCT
TAAAGTAAGCAAGGATGACATCACAGTTGTACTGATAGAAATCGAAGAGT
ACAATGTTTGAGCTCTATCAGCCGTTTGAAGCACATATTCTTTTACTCTT
TCACGCTAGATTTCCCGTCTCGTCCCGtggaagtgtgtccagttttCAAG
TCGATTAGTCCGCCAAGTAATTTAccttagattttcgaacgttcgaactt
CGAAATATTCAAACACTNtgttcatagaaaaacagctatTACTTTTGATA
CCAATTTAGAAAATtgttccgaaaaatttaaaacagttcaattctttgcg
gacagtttgaaaaaatttcaaaataaaaaggttaattacccattaaaact
tagcactttttataaaagaggacgatgcaacatattattaacgtcttttt
aaagttcataacgtcatttttgcaattaaattcttaattacttttaaGGG
ATTTGATCAAAAAAGCAATTTGTAAAGGCAAtgctttgttaaaagtgtaa
aggaacctgaaacataacttttatgctcaaataccaaaatcaattttttg
actatggtcagagcccttaagttcgAATTTCAGAAAGGTTTGAAGAATGT
CTGGAAGTTAGAGAAAATCGGCCTAATTTCTTGCCGTATTATTTAACCTT
TTATGAGCAGAGTTTATACCTACAAAGGTATAATTTCCAATAAATCTGGA
ATGTCACTTAAACATGAATGATAAATGATGTGATTGTGATTCATACTGTA
ACATGATCTACACAGACTTTCTCAGTTTCACAACACAACCTTAAAGTAAG
CAAGGATGACATCACAGTTGTACTGATAGAAATCGAAGAGTACAATGTTT
GAGCTCTATCAGCCGTTTGAAGCACATATTCTTTTACTCTTTCACGCTAG
ATTTCCCGTCTCGTCCCGtggaagtgtgtccagttttCAAGTCGATTAGT
CCGCCAAGTAATTTAccttagattttcgaacgttcgaacttCGAAATATT
CAAACACTGCCAGTTCGATCATGATTTGGACTAAACTTGAAGTCAATCGT
ATTCAAATCGTAATTCTTTTTGACTTGAAGAATACTATTGTTTTTCTCTC
AATAGGTTCTCGCGCATGCTCAGAATGTTCAAGCGAACACTGCGACTGTC
AAAACCACCTTGACATTGAAGGTCCGAATCAAGTTAATCTTCTTGCAACT
ACTAAAGATCTTATTCGAACGCCACGCGCCCCTAATCAAGATGGGGAGGA
ACTACCGACGCCCGAGAGCGCCCAAGATAACAACGACCTGACGGTGCAAC
TACATCGTGTGCTGGGAGCCTTAGAATCGAACATCGAGTTACGAAAACAG
AATAAACCTAACACTGATGCCACTGGCGAGCGGTCGAACGTCTCCAACGC
AGCGGACGCGAGCGAAGTGGATTTGGAAAGTAACTTCTTGGGTGAAGCTC
GAGAGGTAATACTCTTTTATTTGCTCACGTTTTTTGTCTCTGCTAATATA
TTGTCTCCCTTCTACAACCATTCAAATTCACTCACTTCGATATTCGAGTT
ACAGAATAGAAGTTGACTTATTGAAACTAAACGATCTATTTTGTATTAAA
ATTTACTTAGTTTTCAATACATTAAATAGTTTTGATATAGAAATGTCGGT
AAAGAGCTATGTGCCATTTTAGTTTGACTAAACACTGATTGCTACAATCA
GTTCCAAAATACTTGGTACAAAAGGgaaatttcccacgaaattttataac
cacaaacagttttgaagcgctctaaattaggttggaagggtagtcttaaa
tctgagttttaacgcctccaaaagttcaaaaatggtccggtatggcttga
aatatagcctagaaaccaataaatccctcccagatcgaaatattcgatga
aatcaagttgaaggcccaaaattgacattctcgctcgaacttttcgaaaa
atggtaaaatagccaaaattgccaatatgttatggcactgNtgatttacc
gtcgtcctcagttagtcatgatctagtcaaattagaaccttaccgtctcc
gtcgctgaaaaacacacatacataaactcggtaatatctAGACAAACCAG
AAGCTAGTACCGTCTCCGTCACAAAAGcacaaatacataaacttgctatt
aAAACGTTTGAAGGGACGACTAGCTCATCTTTCTTCCgacctcttttttc
ttttagtggAAAAGCAGCTTCAAGAGAACAGCATTCAAGGTTTCGTCAAT
GCTGGCCACGGAGAAGAGGTATGTGATACTACTAATCTCATTTTTCTTTA
ACCTTCATTTGAAATAGACCATTTTCCGAAAAAGGATTCGAATCGGGTTA
TCGATCTTTAACTACTTACAGTCTGAGTCTGTGTGTTTTGAGACTGAATG
TTACATGGTGGATGGTATTACATTGTGAAGTAACCAGGCTGATCTCAAAC
ACATATACGAAGAGGCTTTATATGTCATTTTCATAAATAGATTACACTGT
AATAGAAAGGGATTTATCTTTGAGGGTGAGATTTGGAGAGAGAGGCAATC
GACGTaaaccaaaataaataaacCTTGCTCTTGTGTTGTATAAGTGTCGT
GTTGTTTTCTCATGATCAGAAAATCCCTTATTTCTAATCTTGACTTCCTT
CCTCGCGTGAGCTTTTAAAACAGCAAATTCTTTGGATGACTTTCTAATCT
TTTGTAAAATAGTTATTATGTAAATGAAGAGGGTACAAAAATTCTCCCAT
NATTGTCTCCCTTCTACAACCATTCAAATTCACTCACTTCGATATTCGAG
TTACGGAATAGAAGTTGACTTATTGAAACTAAACGATCTATTTTGTATTA
AAATTTACCTAGTTTGTAATAGATTAAATAAATAGTTTTGATATAGAAAT
GTCGGTAAAGAGCTATGTGCCATTTTAATTTGGCTAAACAATGATTGCTA
CAATCAgttccaaaatacttggcacaaaagggaaatttcccacgaaattt
tataaccacGAACAATTttgaagcgctctaaattaggttggaagggtagt
cttaaatctgagttttaacgctagacttaagacttggaAGACCTtgggat
ctgaggatccaaaagttcaaaaatggtccagtagaataaatccctcccag
atcgaaatattcgataaaatcaagttgaaggcccaaaattgacattctcg
ctcgaacttttcgaaaagtggtaaaatagccaaaattgccaatatgttat
ggcactaaTTGTAGTTTCTAAAGcagtgaaattttctttttgttttaaag
gaaTTCGTGAATCCGTCCTCGTTGCTCAGCCCAGACTCCATGATGAGCGG
TGGACCACAAATCACGGAGATGCTGAAGCAAATCGACAACCTTCGCAAAG
AGAAACGAGATTGTAAGTTTTATTATCCACCATAAGAATGATTAGATTCG
TCTCTCACCCCTTTTATACACGTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041148XLOC_041148Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065669-exon-scaffold_442-1491911889:145868..145942TCONS_00065669-exon-scaffold_442-1491911889:145868..145942Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1510915933:145868..145942TCONS_00065669-exon-scaffold_442-1510915933:145868..145942Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1575043694:145868..145942TCONS_00065669-exon-scaffold_442-1575043694:145868..145942Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1491911889:146244..146560TCONS_00065669-exon-scaffold_442-1491911889:146244..146560Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1510915933:146244..146560TCONS_00065669-exon-scaffold_442-1510915933:146244..146560Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1575043694:146244..146560TCONS_00065669-exon-scaffold_442-1575043694:146244..146560Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1491911889:148255..148412TCONS_00065669-exon-scaffold_442-1491911889:148255..148412Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1510915933:148255..148412TCONS_00065669-exon-scaffold_442-1510915933:148255..148412Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1575043694:148255..148412TCONS_00065669-exon-scaffold_442-1575043694:148255..148412Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1491911889:148959..149120TCONS_00065669-exon-scaffold_442-1491911889:148959..149120Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1510915933:148959..149120TCONS_00065669-exon-scaffold_442-1510915933:148959..149120Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1575043694:148959..149120TCONS_00065669-exon-scaffold_442-1575043694:148959..149120Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1491911889:155393..155557TCONS_00065669-exon-scaffold_442-1491911889:155393..155557Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1510915933:155393..155557TCONS_00065669-exon-scaffold_442-1510915933:155393..155557Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1575043694:155393..155557TCONS_00065669-exon-scaffold_442-1575043694:155393..155557Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1491911889:155812..155980TCONS_00065669-exon-scaffold_442-1491911889:155812..155980Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1510915933:155812..155980TCONS_00065669-exon-scaffold_442-1510915933:155812..155980Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1575043694:155812..155980TCONS_00065669-exon-scaffold_442-1575043694:155812..155980Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1491911889:159373..159722TCONS_00065669-exon-scaffold_442-1491911889:159373..159722Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1510915933:159373..159722TCONS_00065669-exon-scaffold_442-1510915933:159373..159722Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1575043694:159373..159722TCONS_00065669-exon-scaffold_442-1575043694:159373..159722Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1491911889:161568..161742TCONS_00065669-exon-scaffold_442-1491911889:161568..161742Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1510915933:161568..161742TCONS_00065669-exon-scaffold_442-1510915933:161568..161742Clytia hemisphaericaexon
TCONS_00065669-exon-scaffold_442-1575043694:161568..161742TCONS_00065669-exon-scaffold_442-1575043694:161568..161742Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_442supercontigscaffold_442:145868..161742 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.27324	8.41587	3.38248	0.185049	62.7877	48.6403	78.2955	78.3517	31.7215	46.0146	18.2074	31.6357	19.6339	17.6822	12.5554	15.3789	18.2048	16.684	20.3791	22.8546	13.1277	12.9266	11.1697	17.1396	33.8001	27.606	39.5969	24.8768	6.00992	13.4661
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065669 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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