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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065649 ID=TCONS_00065649|Name=TCONS_00065649|organism=Clytia hemisphaerica|type=transcript|length=1659bp
CAaaggttgaaaaataaatagataaaaaaCGTAAGAAATGGGTTTATTGT
CGACAGTGAAAACATTATTGAAATCTTGGAGTGGTGAGAAAAGGAAACGC
GAGGATGATGATTGtgttgaaaaccaacaaaaagtCAAACGTGCAAGAGT
AAATAGCTACACACTGACACCTGTAGCCAAAACATGCAAAGAAGCAGAAC
TCATGAGACGTCACAATCATTATTATGATTACAATGAAGAAGTGAAATCA
ACGGAAACGAGAACTGTTGAATTCAAACAAGGTGGAGTGCTTTTCAACCA
TCACAAATTCATGCAGTTGATACAGAAGTACGGTCCGGCATTTTTGAACT
GCGAAGGCGGTGTTTTATTGGCAGGCGTTACTGATGATGGACGAGTGAAA
GGACTCTCTATTTCATCGAAAGAAGAAAACAACATCAAACTATCTGTCAA
GAATGAAATCAACCGATTCCGACCAATTGTAACTTCAGATTTATGGAGcA
TCGATTTTGTACCAGTGGCAGGTACTGGCAATTCAAGATTGTATATCCCA
GAGAAATTAGTGGTGGAGATCTGCTTTAAGAAAGGTAGCATTGAAAAATT
GTACGAAAATGGAGAACACCAGGTTTTCTTACGACGAGATGGTGGTGTAC
AAGGCCCTTTGCGTCCATTAGATATTAAGAATCTGGTCATTGCGAGATAT
AACGAGacgtTAAAGCTGAGGAGAAACCAAGTGGAACGTGGTGATTTATC
AACACTTGAAAAAACATCTACCGGTTGTCTAAGCACAAAGAAAAAATCGG
TTAAATTGGTGGTAGATCCTAAGAAGGATGCAGAAGCAAAAATAGTGGAA
TATAAACCGACAGAAACAGAACAACAACGACGTGAAAGACTGGCAAAGAA
AGGGATAAAGCTGGTAGATTATAATTCTGATTTCTTTTGAGGATAGTTGC
TGCTCTAATAtgatcaaaaattgcattgctAGCAAGCGGCCTACAAAATG
GTAGCTCAAGTTATTAGAATCAACATTTAAAGGATATAAAATGATGATCG
GATGGAACATCAGTTTTGGTTCAGTGGTTTTTGGTTGCTAAGCAAAAACT
GTTGCTGATGCTAGAGCTTAAAACACAGTTTTAGCCATGTTCTGTTTTGT
CGAAGATTATAGAAAATGACTGGAAgcttattttctttaaaagaaaggAC
CTGTTTTTATCATATAACCTTGATCGGACTAATTTTCGCTAGATTTCTTT
TCGCGAGGCAAGAAAAAAACGCGAAACTCCCTGTATCAGTTTTCGCGAAA
ctgccttttgaaaaagttcacgtgGTCGAATCCTGCAAAAATCAGTTGAA
ATGGCCCTGCGAATGCcctcaaaaaaaagtaaatttacgGTATATTTTAC
GTCTAAAATCttagtttgaaaaaattaaaatctcgCGAAAGTTTAATCGA
TCATATTATATTTTTGTACATATGCTGTaaataattcttataaaaatatt
ttttttacctgGTTCAGAATTTTTAAGTTACTAAATTAGTACCAGTAGCC
AGAAAGTATATTCTCATTGAGTTTCTCTGGTTAGTAGTTTATTTTCCTGC
TAATTTTTATGGCTGATCACATTTAGCTTGAAGATGTAAAGGGTGCTTTT
AGTAATCAA Run BLAST on NCBI protein sequence of TCONS_00065649-protein >TCONS_00065649-protein ID=TCONS_00065649-protein|Name=TCONS_00065649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
MGLLSTVKTLLKSWSGEKRKREDDDCVENQQKVKRARVNSYTLTPVAKTC
KEAELMRRHNHYYDYNEEVKSTETRTVEFKQGGVLFNHHKFMQLIQKYGP
AFLNCEGGVLLAGVTDDGRVKGLSISSKEENNIKLSVKNEINRFRPIVTS
DLWSIDFVPVAGTGNSRLYIPEKLVVEICFKKGSIEKLYENGEHQVFLRR
DGGVQGPLRPLDIKNLVIARYNETLKLRRNQVERGDLSTLEKTSTGCLST
KKKSVKLVVDPKKDAEAKIVEYKPTETEQQRRERLAKKGIKLVDYNSDFF Run BLAST on NCBI transcript from alignment at scaffold_441:6371..15563+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065649 ID=TCONS_00065649|Name=TCONS_00065649|organism=Clytia hemisphaerica|type=transcript|length=9193bp|location=Sequence derived from alignment at scaffold_441:6371..15563+ (Clytia hemisphaerica)
CAaaggttgaaaaataaatagataaaaaaCGTAAGAAATGGGTTTATTGT
CGACAGTGAAAACATTATTGAAATCTTGGAGTGGTGAGAAAAGGAAACGC
GAGGATGATGATTGtgttgaaaaccaacaaaaagtCAAAGTAAGATTTTT
ATTTCTGTCAAGGTTTTGTTTAAGgttaaagttttatattttttagattt
cttaatattttacatcagcatagtgtgcaagggggttccaggtcccacct
gaaaattcaggtcccaccttatcctaaaattcccacctttagcccagact
cccagatcccagctaaaaacaaaaaatatatactaattcgaggaacaaaa
caaaatttctttaccgtaATTATGAAGATGCAATATATTACATATGATAT
ATTAATATGTCTATACATTTAAAAAGCAGATATATTAATGCTCTCAGCTT
TTGCAAAATAAAAGCAGTTCCATCTATCTAAAATTAATTACATAATTACA
TGGTAATAGTTTAGCATGTTAAAAattatttatgaaatatataaaaaaga
tatatcataaaatctgaaaGATTGCATTCACAAAtagaaccccaaaaagt
gaggttttcaatcacaaccactttttagcccacagcgttgacatttttgt
ggctgctgtgtagtacaaaattccataaaataaggaaattgatgagcttt
ccaaaaatgtggccctctttgaagttgagtgattcagtcttgaaatataa
gatgGTAAAGTGAGGGCAGGTTTTGTGGCTGTATGTCATGTGGCTCACTG
AAcaggttggcttatatgtgctgtcctgctttaaaacttcaatatttttt
aaccgtatttttgaaattggtagtttaaggtctgataaagatacttatgg
gtttaatttgtggctgcagggttttcaatagGCTTAAATATggcttcaat
catacttcaatcactaatttatcaatttacacattccaggttgggttttg
ttttcgaaacaTGAATTATTTGCAAAGcctaaagcaaaacaaacacaatc
tgacacaatacagtgttattttaagaaaaagtgtacattttgtggctgca
aataccattttttgtaaCTATAACCTTTGAGCTTTTACATTAGGTATTAG
TTGGCATTTTTAGGGTTGGcttatgtgctgtcctgctttaagacttgaat
attttttaaccgtttttcttgaaattggtagtttaaggtcttaagtaaga
tacttatgggtttaatttgtggctgcagggttttcaatgggcttgaaatg
tggcttcaatcaaagcatatatgaaaaaaatcgtcaactCTGAGCTGCAA
TTCTAGCCCAATGACCCAATaattttggttccatttttgatattttgtgg
ataaacccttttgctacaagtttcatctgaaaaaaaaggtttttactcat
tgaacaaatttgtggctgctgttttatcaacatagtgtttttcttgattt
gtgccgcaattttggcccattttataaaatatttttcttcaacctacttc
aacctactttagaaccaatattgtgaagtttcatttgaaaagagttattt
ttaaaaaggatattcaaatttcttttttttttgatgtttttgaaaacctc
acacaatttttgaatgccatcgaaaataagaaattttactttaactattt
ccaaaacacccaaagtcccacctaaagaaattaactcccaccttaacttg
tttctcccacGTAAAATCTGGAAAACCCCaaatcccacctgaaaattttc
gacccaaatcagcaaaacccccccccccccccccccNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctattctggggggggg
gtgcacactatgaaGGCCATTAAAATTTCATAGAATGAGGGGGGGAAGAC
GAACCTTTTCATAGCAAAAAACATTCCTGGATAATTTTATTGGTAGCTCT
GGTTTGTAAATGCAAACTGAATGAAAGTTTTGATTATATTAACTACTACT
ACGAAAAAGCCATTACATTTACATTATAGAATACACAAGAACGAATGAGG
AATCAATCAATTACGTCATCTTTCATTCTCCTTTGACTTGATTCTAGGaa
aatcaatcaatttttctttttactaaataaaagtttagttgtttttattt
cttgtcaTTTCAGCGTGCAAGAGTAAATAGCTACACACTGACACCTGTAG
CCAAAACATGCAAAGAAGCAGAACTCATGAGGTAATAATGAATATTAAAC
TTAAAGTCTGGAGCCAGATTCTCNAAAGTTAACAAGTGATTGaacccaaa
aaacagcagaaaacagcgtttttagacgtcaatcagcttataaatttgtt
tgatatcttttgactgaatgattatttttgagaattttttNCAAAAACTT
TGATCAGATTTTTTAGAAAGTGATAGTTAGCTTATGGTAAAACTATTCGA
TTGACTCAGAGGAATGTGAAGAGATGGTAAatcagcttcttgaaaacaat
ggaaaaacgactcgtcatataccaggtctcttgcccttaagggagtttat
gtcaataaataggtttcttttgttgtcgctataaaaaatctgcataatta
gcgtgttgtgacaaaattcttttgtttcaagcctgattatgcgcaNTACT
TCGCTACAAGAtcttcatcttcgtttttagaattttttcaaaaatgtttt
atttcagATTGTTCCACTcagtaatatctttccaatgataccaaatttat
aaagattgaagaattccttcaaaagttatataggtagatgaaaaaagagt
gcacacttatcgtgaatagactttagtaatcggcaaaaaaggaaaaacaa
attttcatttttatcatcgaatcatgtagaaaccgtccgatttgtatagc
gagccgtcttttctggactttcatttaatgacttaatcaacgtttttaca
atagaattttcaatagaagtgatcgttgaactttgagtaatcagaaaagc
tgtttttccatctctttacattccNtagttttacaagaaccaatttaata
tcattgcgttaagaatttctttttctatacattggtaaaaatattgctcc
ttattcttaaaaattgaactaaagtctattcacgataagtgtgcactctt
ttttcttttacctataactttNTTTGAATGAATTATAATTTGACCCATAT
CGAACAGTACTACACCATAAGGTTGCCACTTACAACAGTGAAAGTcatat
aatatttgaaaaaaaatgaaatttcttatagctacaaacgatttggaagc
gctctaactaaggttggaagggtagagttttaactctgagttttaacatt
agacttttaaaaagcttaagatctgaggatccaaaagttcaagaatggtc
caatagggcttagaatatagcctggaagtctataaaaactcctcccgaat
tgaaatatttcataaaatttaacaaatagcccaaaatcgactttctcgct
agaactttaaattgcttaaaacGAGTAATTAACtgaaattctcaatatat
ctTGACAGAGATTGTAGAGCTGGAAAGATAGGAAAAGAAACTCATTTGGG
ACTTTTTTTGAAGACACCAGACTTTTTAACCTTTAATACTGTGATTTTTA
CTAAGATGGAGGTATATTCATGTAGGAACATTTAATTAATTTCTTGTTTG
TCTCAGACGTCACAATCATTATTATGATTACAATGAAGAAGTGAAATCAA
CGGAAACGAGAACTGTTGAATTCAAACAAGGTGGAGTGCTTTTCAACCAT
CACAAATTCATGCAGGCGAGTATCAATTCTTGCAAGATTTTTATCAAACT
TTGTCATGTTGTTGTTTGCTAAATTAGAATTCTAAATTCATTCGGTTAAA
TTATTCACAAGAAAGAGTGAAAAATCCTGCAATTAATGTAATACTtaatt
ttgggatttttttttaCCCACTCGGTATGACCAATGATATGTTCTGTTCT
GAGTTATTTTAGTCCTGTCGTAATATGtggcttttccaaaaaagaaCATG
GTATACCCCCTGTCGAGGAGGTCCATCCCTTTGACTGGAAATGCTGTAat
cccctggaattccaggcaatttcaggtttacacccctctggaattctgaa
ttttagtaggatttaaaaagctacccccatggaatttcagttatttttga
cagatttttgtatctccctatggaNgtaggatttaaaaagcgacccccat
ggaatttcagttatttttgacagatttttgtatctccctatggaattctg
ccacatatcaaaccttaccccttGGAACAGAAAAggactcctcaacaggg
ggtatacggtttttttctggaaaagcccaggAGTGGTAAGATGTAATGTG
AGTTACTCAAACCTTTCCAatcttttcaaccttttttctAACTATAACAG
TTGATACAGAAGTACGGTCCGGCATTTTTGAACTGCGAAGGCGGTGTTTT
ATTGGCAGGCGTTACTGATGATGGTGAGTATCTTGGTTTAAGTATctgga
tattttttcaaatttgattcatcaatctgaaaatttaaaggttttatttt
tacataagtgttcccgtttcatatcagacatgtCATGTCTCATATCATCA
TAGTGTCTCCCTTTTattatattgtgctgaataaacaaaaaaaaaaatcc
tctTTCATGCTCtacatctgtgtcaattcaatgtgaaaaagcttgtaaat
tgaaatcgacaagtaagcaaacgatatcactcttatttaaaaacaaaacc
tttaaatctgATCATGAAGAACTAGCCTactaagaaattaatttttgttg
TCATAAGTTGAAAAAGCTTGCTTGTTGAAAGATATATAGGAAAAGGTATT
TTTTTCCTTAGACGGACGGAAATAtctttgatggtcggaaatatccttGC
GTAATAATAGTCAGAAACATCATAAGATGGGCGGAaatatgctgacaaag
catatTTAAAGAAGctcgggatatttccgaccatcaattTTCccacgatt
ttgaaaaaaatcaaagatatgTCCGACCATCAAAATATATTTCCGCCCAT
CTTTGATATTTCCAACCATTACGCAAGggtatttccgaccatcaaagaTA
TTTCCGTCCGTCTAAGGAAAAAAATACGCGATGGCATGATTGGGTCTTTT
TTGGCGTGAAGGCGTGATctatgatttttatgattttaaaaagTGCAACA
cgtgattgttttgttttttttggtgtGATTATGATGAACTCCACTATTTT
GAATTCTTTAACATTTTGAACATTCTACCCTGCTATTACTGCGTGAAGGA
TGTCACTCAATTTATTATAAACATATCTTCAACTTTCAGGACGAGTGAAA
GGACTCTCTATTTCATCGAAAGAAGAAAACAACATCAAACTATCTGTCAA
GAATGAAATCAACCGATTCCGACCAATTGTAACTTCAGATTTATGGAGGT
ACGGTAGATCCTTTGAAGATCTTGATTGTATTTTGCAGTAATACAATCCT
AATCAAAGACAGTATTGAAGAGTAATACTATTCTAATCAAAGACAGTATA
ATATCAACTATTCGTGAGAAAGGGTCAGGTTTTACAAAGTGGATAATTTT
TAAAGTACAGTcgacgctctttaattcgacgCTCTAACTATTCAATACAC
TCttttattcgataatattaaaAGCCATCGCTGACAAGAATCTCTCATAA
ATGACTCTCTAATATTCGgcacgctcccttattcgacgTAAATCTTATTc
cattgacaatcaaatttgagagcgtcaactgtaagaATATTTATTATTTT
CCGTCTCTATCAGTATATTGTGTCAATCCATAATATTGTTTGTTGTGAAA
TTTTGTAATTCTGCGCAAAAAAAGTGCTAAATCTGTTCCTTAGAAATTTA
TCGTCAAAGCGTCAAACCATGTACTCTGTACCAGACCAGATTCTATCtcc
gtttatcgcttcgtagtacggcaatgaattttgaaataagccaCGGATAC
TGATAACAAACCATGTGACtggaaattatttctttttttatagcATCGAT
TTTGTACCAGTGGCAGGTACTGGCAATTCAAGATTGTATATCCCAGAGAA
ATTAGTGGTGGAGATCTGCTTTAAGAAAGGTAGCATTGAAAAATTGTACG
AAAATGGAGAACACCAGGTACTAACTTACCAACATTTTTACAATAATTTT
GATATATTTGGAGAAGTTTATAGGGTTCCCgtgttttctcaatttttcag
aACATATTCAGGAAGAAATAATATTTAAAACCCTGCCCTTAGTCCTCTTT
TCAAAAACACAAACGAAAAAGTGTCGAAGCTGGATCGGCNAGACTCACCT
GTCAGACCAATTTTTAGCCATCCTTGAGCCGGCGTTTGTTACGGAGGAGA
GAAGAAATCATGTAGGCAATCAACAAATTTCAATCTACAAACCCTGCAGA
TTTGCAAATTTTTGGACAAAGTTGCAGGAGTTGAATATCTTGTAGATGTT
GTAGCAAATGAAGGTGGCCANTAGTTGTTAgaagaaaacatcaaaacaaa
actgcGTGTCGCTTTCGCTATGTTCATTtgacaatagaatgtcttcttTC
CAAACATACATAATAACGAAAATTAATTTAGAACGCTTTGGGGACAAACT
ATTGGTCACTGCAAACCCTGCAAACCCTAcaaaaaacccatatttacaaA
TCTTTGGTCACAAATTTGAAGGGTTTGCAGCGTTTGAAGGAGATTCAAAC
ACAGTACCTCTTGAGCTACTTTGTTTGTAGATATCACAGGAGTTGCAGCT
GAATTTCAACCTTTCCTCAGCAAAAAGAAATGTGCAAATCTTTGGGACAT
TCAAACCCTGCAAACCCtacagaaaatttacaaaatctgccatatttgtt
tttattctttgGTTTAATTTACTAAGATTAAAAACCGCTATTTGTTACGA
ATGTCAAAAATGGATGACTGACCAAGGATAAACCATGTGacttctcttct
ctttattaTCACAGCGGGCAGACTCACCTGTCAGACCAATTTTTAGCCAT
CCTTGAGCCGGCTTTTGTTACGGAGGAGAGAAGAAATCATGTAGGCAATC
AACAAATTTCAATCTACAAACCCTGCAGATTTGCAAATTTTTGGACAAAG
TTGCAGGAGTTGAATATCTTGTAGATGTTGTAGCAAATGAAGGTGGCCAA
TAGTTTGTACCCTTTGACGTAAAAATTAAGAAGTAAAGAGGAAGAATCTT
TGATAATTGAACGAAATGGTTTAcaagaaaaaactaaatattTTGCATTG
CTTTTGCAGCATACAGCTTCATATTATAAATTTTCTTTAACGCTAATTAG
CTTTTCTCAAGGTTTTCTTACGACGAGATGGTGGTGTACAAGGCCCTTTG
CGTCCATTAGATATTAAGAATCTGGTCATTGCGAGATATAACGAGGTGAG
TAATgaattttttgaacttttgtattgtacaaaaatatagtgactacctc
accaaaaaccgatTTTTTATGCGTAAAAAAAAAGCCGTggcgtctagtat
aggctaacaAAAATAAGGTTTCACTCCGTAATCAAATCGACTTTCCAGTG
CACCGACTGGTTGGTGGTCTATGCTCTACATTGAGATCCAGCTAAACTCC
GAACGAAAGCTATTTGACGTACATAGCTTTTGTGATGCCTTGATCtttac
aacattttttttttgtttacaatatccTTCATACTACAGTCattgtcaaa
atatattgacaatgttaggtattttaacgtttttcagaatcaAAATACGT
ATATAAGTCAAAAGTACTTCtactttatttcatttataagGTTCTCACCA
TTCTTTATTATTTGAGGAAATAAGTGGGCTCTCGCTTAATCGAACttctt
attcgaatctttctataatccgAACCTTTCTATAATCCGAACTTATTTCT
AGCCCCGTCAAGGAGAATCCCTCTTAGATCCCTCCTCTTACTTTCTATAG
TTCAAATCTCTCTATGATTCGAACAAACAAGATTCCCTGTTCGAGTTCGA
aatagagagagtcaactgtgcttgtttttttattttccagacgtTAAAGC
TGAGGAGAAACCAAGTGGAACGTGGTGATTTATCAACACTTGAAAAAACA
TCTACCGGTTGTCTAAGCACAAAGAAAAAATCGGTTAAATTGGTGGTAGA
TCCTAAGAAGGATGCAGAAGCAAAAATAGTGGAATATAAACCGACAGAAA
CAGAACAACAACGACGTGAAAGACTGGCAAAGAAAGGGATAAAGCTGGTA
GATTATAATTCTGATTTCTTTTGAGGATAGTTGCTGCTCTAATAtgatca
aaaattgcattgctAGCAAGCGGCCTACAAAATGGTAGCTCAAGTTATTA
GAATCAACATTTAAAGGATATAAAATGATGATCGGATGGAACATCAGTTT
TGGTTCAGTGGTTTTTGGTTGCTAAGCAAAAACTGTTGCTGATGCTAGAG
CTTAAAACACAGTTTTAGCCATGTTCTGTTTTGTCGAAGATTATAGAAAA
TGACTGGAAgcttattttctttaaaagaaaggACCTGTTTTTATCATATA
ACCTTGATCGGACTAATTTTCGCTAGATTTCTTTTCGCGAGGCAAGAAAA
AAACGCGAAACTCCCTGTATCAGTTTTCGCGAAActgccttttgaaaaag
ttcacgtgGTCGAATCCTGCAAAAATCAGTTGAAATGGCCCTGCGAATGC
cctcaaaaaaaagtaaatttacgGTATATTTTACGTCTAAAATCttagtt
tgaaaaaattaaaatctcgCGAAAGTTTAATCGATCATATTATATTTTTG
TACATATGCTGTaaataattcttataaaaatattttttttacctgGTTCA
GAATTTTTAAGTTACTAAATTAGTACCAGTAGCCAGAAAGTATATTCTCA
TTGAGTTTCTCTGGTTAGTAGTTTATTTTCCTGCTAATTTTTATGGCTGA
TCACATTTAGCTTGAAGATGTAAAGGGTGCTTTTAGTAATCAA Coding sequence (CDS) from alignment at scaffold_441:6371..15563+ >TCONS_00065649 ID=TCONS_00065649|Name=TCONS_00065649|organism=Clytia hemisphaerica|type=CDS|length=7224bp|location=Sequence derived from alignment at scaffold_441:6371..15563+ (Clytia hemisphaerica)
ATGGGTTTATTGTCGACAGTGAAAACATTATTGAAATCTTGGAGTGGTGA
GAAAAGGAAACGCGAGGATGATGATTGtgttgaaaaccaacaaaaagtCA
AACGTGCAAGAGTAAATAGCTACACACTGACACCTGTAGCCAAAACATGC
AAAGAAGCAGAACTCATGAGACGTCACAATCATTATTATGATTACAATGA
AGAAGTGAAATCAACGGAAACGAGAACTGTTGAATTCAAACAAGGTGGAG
TGCTTTTCAACCATCACAAATTCATGCAGTTGATACAGAAGTACGGTCCG
GCATTTTTGAACTGCGAAGGCGGTGTTTTATTGGCAGGCGTTACTGATGA
TGGACGAGTGAAAGGACTCTCTATTTCATCGAAAGAAGAAAACAACATCA
AACTATCTGTCAAGAATGAAATCAACCGATTCCGACCAATTGTAACTTCA
GATTTATGGAGcATCGATTTTGTACCAGTGGCAGGTACTGGCAATTCAAG
ATTGTATATCCCAGAGAAATTAGTGGTGGAGATCTGCTTTAAGAAAGGTA
GCATTGAAAAATTGTACGAAAATGGAGAACACCAGGTTTTCTTACGACGA
GATGGTGGTGTACAAGGCCCTTTGCGTCCATTAGATATTAAGAATCTGGT
CATTGCGAGATATAACGAGacgtTAAAGCTGAGGAGAAACCAAGTGGAAC
GTGGTGATTTATCAACACTTGAAAAAACATCTACCGGTTGTCTAAGCACA
AAGAAAAAATCGGTTAAATTGGTGGTAGATCCTAAGAAGGATGCAGAAGC
AAAAATAGTGGAATATAAACCGACAGAAACAGAACAACAACGACGTGAAA
GACTGGCAAAGAAAGGGATAAAGCTGGTAGATTATAATTCTGATTTCTTT
TGAATGGGTTTATTGTCGACAGTGAAAACATTATTGAAATCTTGGAGTGG
TGAGAAAAGGAAACGCGAGGATGATGATTGtgttgaaaaccaacaaaaag
tCAAACGTGCAAGAGTAAATAGCTACACACTGACACCTGTAGCCAAAACA
TGCAAAGAAGCAGAACTCATGAGACGTCACAATCATTATTATGATTACAA
TGAAGAAGTGAAATCAACGGAAACGAGAACTGTTGAATTCAAACAAGGTG
GAGTGCTTTTCAACCATCACAAATTCATGCAGTTGATACAGAAGTACGGT
CCGGCATTTTTGAACTGCGAAGGCGGTGTTTTATTGGCAGGCGTTACTGA
TGATGGACGAGTGAAAGGACTCTCTATTTCATCGAAAGAAGAAAACAACA
TCAAACTATCTGTCAAGAATGAAATCAACCGATTCCGACCAATTGTAACT
TCAGATTTATGGAGcATCGATTTTGTACCAGTGGCAGGTACTGGCAATTC
AAGATTGTATATCCCAGAGAAATTAGTGGTGGAGATCTGCTTTAAGAAAG
GTAGCATTGAAAAATTGTACGAAAATGGAGAACACCAGGTTTTCTTACGA
CGAGATGGTGGTGTACAAGGCCCTTTGCGTCCATTAGATATTAAGAATCT
GGTCATTGCGAGATATAACGAGacgtTAAAGCTGAGGAGAAACCAAGTGG
AACGTGGTGATTTATCAACACTTGAAAAAACATCTACCGGTTGTCTAAGC
ACAAAGAAAAAATCGGTTAAATTGGTGGTAGATCCTAAGAAGGATGCAGA
AGCAAAAATAGTGGAATATAAACCGACAGAAACAGAACAACAACGACGTG
AAAGACTGGCAAAGAAAGGGATAAAGCTGGTAGATTATAATTCTGATTTC
TTTTGAATGGGTTTATTGTCGACAGTGAAAACATTATTGAAATCTTGGAG
TGGTGAGAAAAGGAAACGCGAGGATGATGATTGtgttgaaaaccaacaaa
aagtCAAACGTGCAAGAGTAAATAGCTACACACTGACACCTGTAGCCAAA
ACATGCAAAGAAGCAGAACTCATGAGACGTCACAATCATTATTATGATTA
CAATGAAGAAGTGAAATCAACGGAAACGAGAACTGTTGAATTCAAACAAG
GTGGAGTGCTTTTCAACCATCACAAATTCATGCAGTTGATACAGAAGTAC
GGTCCGGCATTTTTGAACTGCGAAGGCGGTGTTTTATTGGCAGGCGTTAC
TGATGATGGACGAGTGAAAGGACTCTCTATTTCATCGAAAGAAGAAAACA
ACATCAAACTATCTGTCAAGAATGAAATCAACCGATTCCGACCAATTGTA
ACTTCAGATTTATGGAGcATCGATTTTGTACCAGTGGCAGGTACTGGCAA
TTCAAGATTGTATATCCCAGAGAAATTAGTGGTGGAGATCTGCTTTAAGA
AAGGTAGCATTGAAAAATTGTACGAAAATGGAGAACACCAGGTTTTCTTA
CGACGAGATGGTGGTGTACAAGGCCCTTTGCGTCCATTAGATATTAAGAA
TCTGGTCATTGCGAGATATAACGAGacgtTAAAGCTGAGGAGAAACCAAG
TGGAACGTGGTGATTTATCAACACTTGAAAAAACATCTACCGGTTGTCTA
AGCACAAAGAAAAAATCGGTTAAATTGGTGGTAGATCCTAAGAAGGATGC
AGAAGCAAAAATAGTGGAATATAAACCGACAGAAACAGAACAACAACGAC
GTGAAAGACTGGCAAAGAAAGGGATAAAGCTGGTAGATTATAATTCTGAT
TTCTTTTGAATGGGTTTATTGTCGACAGTGAAAACATTATTGAAATCTTG
GAGTGGTGAGAAAAGGAAACGCGAGGATGATGATTGtgttgaaaaccaac
aaaaagtCAAACGTGCAAGAGTAAATAGCTACACACTGACACCTGTAGCC
AAAACATGCAAAGAAGCAGAACTCATGAGACGTCACAATCATTATTATGA
TTACAATGAAGAAGTGAAATCAACGGAAACGAGAACTGTTGAATTCAAAC
AAGGTGGAGTGCTTTTCAACCATCACAAATTCATGCAGTTGATACAGAAG
TACGGTCCGGCATTTTTGAACTGCGAAGGCGGTGTTTTATTGGCAGGCGT
TACTGATGATGGACGAGTGAAAGGACTCTCTATTTCATCGAAAGAAGAAA
ACAACATCAAACTATCTGTCAAGAATGAAATCAACCGATTCCGACCAATT
GTAACTTCAGATTTATGGAGcATCGATTTTGTACCAGTGGCAGGTACTGG
CAATTCAAGATTGTATATCCCAGAGAAATTAGTGGTGGAGATCTGCTTTA
AGAAAGGTAGCATTGAAAAATTGTACGAAAATGGAGAACACCAGGTTTTC
TTACGACGAGATGGTGGTGTACAAGGCCCTTTGCGTCCATTAGATATTAA
GAATCTGGTCATTGCGAGATATAACGAGacgtTAAAGCTGAGGAGAAACC
AAGTGGAACGTGGTGATTTATCAACACTTGAAAAAACATCTACCGGTTGT
CTAAGCACAAAGAAAAAATCGGTTAAATTGGTGGTAGATCCTAAGAAGGA
TGCAGAAGCAAAAATAGTGGAATATAAACCGACAGAAACAGAACAACAAC
GACGTGAAAGACTGGCAAAGAAAGGGATAAAGCTGGTAGATTATAATTCT
GATTTCTTTTGAATGGGTTTATTGTCGACAGTGAAAACATTATTGAAATC
TTGGAGTGGTGAGAAAAGGAAACGCGAGGATGATGATTGtgttgaaaacc
aacaaaaagtCAAACGTGCAAGAGTAAATAGCTACACACTGACACCTGTA
GCCAAAACATGCAAAGAAGCAGAACTCATGAGACGTCACAATCATTATTA
TGATTACAATGAAGAAGTGAAATCAACGGAAACGAGAACTGTTGAATTCA
AACAAGGTGGAGTGCTTTTCAACCATCACAAATTCATGCAGTTGATACAG
AAGTACGGTCCGGCATTTTTGAACTGCGAAGGCGGTGTTTTATTGGCAGG
CGTTACTGATGATGGACGAGTGAAAGGACTCTCTATTTCATCGAAAGAAG
AAAACAACATCAAACTATCTGTCAAGAATGAAATCAACCGATTCCGACCA
ATTGTAACTTCAGATTTATGGAGcATCGATTTTGTACCAGTGGCAGGTAC
TGGCAATTCAAGATTGTATATCCCAGAGAAATTAGTGGTGGAGATCTGCT
TTAAGAAAGGTAGCATTGAAAAATTGTACGAAAATGGAGAACACCAGGTT
TTCTTACGACGAGATGGTGGTGTACAAGGCCCTTTGCGTCCATTAGATAT
TAAGAATCTGGTCATTGCGAGATATAACGAGacgtTAAAGCTGAGGAGAA
ACCAAGTGGAACGTGGTGATTTATCAACACTTGAAAAAACATCTACCGGT
TGTCTAAGCACAAAGAAAAAATCGGTTAAATTGGTGGTAGATCCTAAGAA
GGATGCAGAAGCAAAAATAGTGGAATATAAACCGACAGAAACAGAACAAC
AACGACGTGAAAGACTGGCAAAGAAAGGGATAAAGCTGGTAGATTATAAT
TCTGATTTCTTTTGAATGGGTTTATTGTCGACAGTGAAAACATTATTGAA
ATCTTGGAGTGGTGAGAAAAGGAAACGCGAGGATGATGATTGtgttgaaa
accaacaaaaagtCAAACGTGCAAGAGTAAATAGCTACACACTGACACCT
GTAGCCAAAACATGCAAAGAAGCAGAACTCATGAGACGTCACAATCATTA
TTATGATTACAATGAAGAAGTGAAATCAACGGAAACGAGAACTGTTGAAT
TCAAACAAGGTGGAGTGCTTTTCAACCATCACAAATTCATGCAGTTGATA
CAGAAGTACGGTCCGGCATTTTTGAACTGCGAAGGCGGTGTTTTATTGGC
AGGCGTTACTGATGATGGACGAGTGAAAGGACTCTCTATTTCATCGAAAG
AAGAAAACAACATCAAACTATCTGTCAAGAATGAAATCAACCGATTCCGA
CCAATTGTAACTTCAGATTTATGGAGcATCGATTTTGTACCAGTGGCAGG
TACTGGCAATTCAAGATTGTATATCCCAGAGAAATTAGTGGTGGAGATCT
GCTTTAAGAAAGGTAGCATTGAAAAATTGTACGAAAATGGAGAACACCAG
GTTTTCTTACGACGAGATGGTGGTGTACAAGGCCCTTTGCGTCCATTAGA
TATTAAGAATCTGGTCATTGCGAGATATAACGAGacgtTAAAGCTGAGGA
GAAACCAAGTGGAACGTGGTGATTTATCAACACTTGAAAAAACATCTACC
GGTTGTCTAAGCACAAAGAAAAAATCGGTTAAATTGGTGGTAGATCCTAA
GAAGGATGCAGAAGCAAAAATAGTGGAATATAAACCGACAGAAACAGAAC
AACAACGACGTGAAAGACTGGCAAAGAAAGGGATAAAGCTGGTAGATTAT
AATTCTGATTTCTTTTGAATGGGTTTATTGTCGACAGTGAAAACATTATT
GAAATCTTGGAGTGGTGAGAAAAGGAAACGCGAGGATGATGATTGtgttg
aaaaccaacaaaaagtCAAACGTGCAAGAGTAAATAGCTACACACTGACA
CCTGTAGCCAAAACATGCAAAGAAGCAGAACTCATGAGACGTCACAATCA
TTATTATGATTACAATGAAGAAGTGAAATCAACGGAAACGAGAACTGTTG
AATTCAAACAAGGTGGAGTGCTTTTCAACCATCACAAATTCATGCAGTTG
ATACAGAAGTACGGTCCGGCATTTTTGAACTGCGAAGGCGGTGTTTTATT
GGCAGGCGTTACTGATGATGGACGAGTGAAAGGACTCTCTATTTCATCGA
AAGAAGAAAACAACATCAAACTATCTGTCAAGAATGAAATCAACCGATTC
CGACCAATTGTAACTTCAGATTTATGGAGcATCGATTTTGTACCAGTGGC
AGGTACTGGCAATTCAAGATTGTATATCCCAGAGAAATTAGTGGTGGAGA
TCTGCTTTAAGAAAGGTAGCATTGAAAAATTGTACGAAAATGGAGAACAC
CAGGTTTTCTTACGACGAGATGGTGGTGTACAAGGCCCTTTGCGTCCATT
AGATATTAAGAATCTGGTCATTGCGAGATATAACGAGacgtTAAAGCTGA
GGAGAAACCAAGTGGAACGTGGTGATTTATCAACACTTGAAAAAACATCT
ACCGGTTGTCTAAGCACAAAGAAAAAATCGGTTAAATTGGTGGTAGATCC
TAAGAAGGATGCAGAAGCAAAAATAGTGGAATATAAACCGACAGAAACAG
AACAACAACGACGTGAAAGACTGGCAAAGAAAGGGATAAAGCTGGTAGAT
TATAATTCTGATTTCTTTTGAATGGGTTTATTGTCGACAGTGAAAACATT
ATTGAAATCTTGGAGTGGTGAGAAAAGGAAACGCGAGGATGATGATTGtg
ttgaaaaccaacaaaaagtCAAACGTGCAAGAGTAAATAGCTACACACTG
ACACCTGTAGCCAAAACATGCAAAGAAGCAGAACTCATGAGACGTCACAA
TCATTATTATGATTACAATGAAGAAGTGAAATCAACGGAAACGAGAACTG
TTGAATTCAAACAAGGTGGAGTGCTTTTCAACCATCACAAATTCATGCAG
TTGATACAGAAGTACGGTCCGGCATTTTTGAACTGCGAAGGCGGTGTTTT
ATTGGCAGGCGTTACTGATGATGGACGAGTGAAAGGACTCTCTATTTCAT
CGAAAGAAGAAAACAACATCAAACTATCTGTCAAGAATGAAATCAACCGA
TTCCGACCAATTGTAACTTCAGATTTATGGAGcATCGATTTTGTACCAGT
GGCAGGTACTGGCAATTCAAGATTGTATATCCCAGAGAAATTAGTGGTGG
AGATCTGCTTTAAGAAAGGTAGCATTGAAAAATTGTACGAAAATGGAGAA
CACCAGGTTTTCTTACGACGAGATGGTGGTGTACAAGGCCCTTTGCGTCC
ATTAGATATTAAGAATCTGGTCATTGCGAGATATAACGAGacgtTAAAGC
TGAGGAGAAACCAAGTGGAACGTGGTGATTTATCAACACTTGAAAAAACA
TCTACCGGTTGTCTAAGCACAAAGAAAAAATCGGTTAAATTGGTGGTAGA
TCCTAAGAAGGATGCAGAAGCAAAAATAGTGGAATATAAACCGACAGAAA
CAGAACAACAACGACGTGAAAGACTGGCAAAGAAAGGGATAAAGCTGGTA
GATTATAATTCTGATTTCTTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065649-exon-scaffold_441-1491911889:6371..6509 | TCONS_00065649-exon-scaffold_441-1491911889:6371..6509 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1510915933:6371..6509 | TCONS_00065649-exon-scaffold_441-1510915933:6371..6509 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1575043694:6371..6509 | TCONS_00065649-exon-scaffold_441-1575043694:6371..6509 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1491911889:8634..8701 | TCONS_00065649-exon-scaffold_441-1491911889:8634..8701 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1510915933:8634..8701 | TCONS_00065649-exon-scaffold_441-1510915933:8634..8701 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1575043694:8634..8701 | TCONS_00065649-exon-scaffold_441-1575043694:8634..8701 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1491911889:10177..10285 | TCONS_00065649-exon-scaffold_441-1491911889:10177..10285 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1510915933:10177..10285 | TCONS_00065649-exon-scaffold_441-1510915933:10177..10285 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1575043694:10177..10285 | TCONS_00065649-exon-scaffold_441-1575043694:10177..10285 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1491911889:10921..10993 | TCONS_00065649-exon-scaffold_441-1491911889:10921..10993 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1510915933:10921..10993 | TCONS_00065649-exon-scaffold_441-1510915933:10921..10993 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1575043694:10921..10993 | TCONS_00065649-exon-scaffold_441-1575043694:10921..10993 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1491911889:11860..11968 | TCONS_00065649-exon-scaffold_441-1491911889:11860..11968 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1510915933:11860..11968 | TCONS_00065649-exon-scaffold_441-1510915933:11860..11968 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1575043694:11860..11968 | TCONS_00065649-exon-scaffold_441-1575043694:11860..11968 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1491911889:12564..12687 | TCONS_00065649-exon-scaffold_441-1491911889:12564..12687 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1510915933:12564..12687 | TCONS_00065649-exon-scaffold_441-1510915933:12564..12687 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1575043694:12564..12687 | TCONS_00065649-exon-scaffold_441-1575043694:12564..12687 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1491911889:13882..13965 | TCONS_00065649-exon-scaffold_441-1491911889:13882..13965 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1510915933:13882..13965 | TCONS_00065649-exon-scaffold_441-1510915933:13882..13965 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1575043694:13882..13965 | TCONS_00065649-exon-scaffold_441-1575043694:13882..13965 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1491911889:14611..15563 | TCONS_00065649-exon-scaffold_441-1491911889:14611..15563 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1510915933:14611..15563 | TCONS_00065649-exon-scaffold_441-1510915933:14611..15563 | Clytia hemisphaerica | exon |
| TCONS_00065649-exon-scaffold_441-1575043694:14611..15563 | TCONS_00065649-exon-scaffold_441-1575043694:14611..15563 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_441 | supercontig | scaffold_441:6371..15563 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007421 | Schlafen_AAA_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
Blast
BLAST of TCONS_00065649 vs. Swiss-Prot (Human)
Match: SLNL1 (Schlafen-like protein 1 OS=Homo sapiens GN=SLFNL1 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.078e-21 Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 2
Query: 251 TETRTVEFKQGGVLFNHHKFMQLIQKYGPAFLNCEGGVLLAGVTDDGRVKGLSISSKEENNIKLSVKNEINRFRPIVTSDLWSIDFVPVAGTGNSRLYIPEKLVVEICF--KKGSIEKLYENGEHQVFLRRDGGVQGPLRPLDIKNLVIARY 700
+ETR +EFK+G + F +++Y AFLN EGG LL GV D G V+G+ S ++E+ +L V + + F+P + D +++ F+PV T S +P K++ K S +LY+ + +VFLRRDG +QGPL I+ R+
Sbjct: 220 SETRNMEFKRGSGEYLSLAFKHHVRRYVCAFLNSEGGSLLVGVEDSGLVQGIRCSHRDEDRARLLVDSILQGFKPQIFPDAYTLTFIPVIST--SETSVPLKVIRLTVHTPKAQSQPQLYQTDQGEVFLRRDGSIQGPLSASAIQEWCRQRW 369
The following BLAST results are available for this feature:
|
