TCONS_00065578 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065578
Unique NameTCONS_00065578
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4585

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065578 ID=TCONS_00065578|Name=TCONS_00065578|organism=Clytia hemisphaerica|type=transcript|length=4585bp
GTTTGTGAGAGATTACACACATCAAAATGTGGTTCTGGGTCGAAGGATAC
TGCAATTCAAGTAATGATAATACCACCAAGAAGAACGTCCTGAGTTTGAC
TCTCAATCTTTCGGACAAAAGCGACGTCGATGAATTATCGGACATGGAGA
GCAGtaacaataataacaataagCCAAGGCGTTCAGCATCCCTCAAGGTG
CCACCAAGAAGTGCTCCAgtaccattggaaaggAAAGTGAGTTCTCCAAT
TATATCAGCCAATCACTCAACAGATTCCTTACCAGACCTCGAAACACCGC
GCACTCCGAACAACAGTGCCACTCGCTTGAAACGTGACTACCATATCACG
GACACGGAAATAGCCGCTCTGCGTGCCATCATTAAAAAGGCTGATCTGTA
CGACCAAACAGTCCGAGAAAGAATGTTTCAGGTTTTGAAGATCGATGAAA
CGGACGAGGCAGATGCTGAAGCCATAGCTACCAAGGTGGTTAGCGACAAA
GAGATTGAATCACTGAAACAGCGTTTATTTATGTCTCGTAAAGAACTCGA
CTCTTATATCTCCTTCACCAAGAAGATGGAGCGCGAAAAACGACAATCCA
TTTCCGAAAAGGAAGAACTCGAAACGAAGATTCAATGGCACGAAAGACGT
TTATCGCGTTTCGAAAACGAAAATAAGACCCTTAAACAAGAGCGCGCTAA
CCTGATGAACCAAATTTACGAGCTCCGTAGTAAATCAAGTAAAGAGAGCG
GACACACGCGACAGAAATCAGTCGACGTTGCGGCTCTTTTAAGCGAGCAA
TCGGAACTCGAATCATCTAAGCAACGTTTTATTCACGAAGCCGACGTCTT
TGCTCAAGAACGTACTAAATATATCAAGGAACGGCAACGACTTGACGAGG
ACAATAGGAAAGCTCACATTCGGAACGTCTCGCTTATCGCTCAAGTACAA
CACTGGGAGAAAACGGTTAAAGAACTGGAAACGGAGAAGGAAGACTTAAA
AACGAGATTATCGAAAATGACTCGACAATCAGTTGATGAACAACGAAAAT
CGATTAGCGCCGGTACTTTAAACAATAACAACAAACTCGAGAAAACTGAT
TCGATAGATGAAACAGACAGCAATAATTACAGTTGTTTGATTGAAACGAT
TAAATTCGATGATTCTGAGATCAATCGATTACGAAAGGAACTCGAAAGCG
CGGAAGAACGCTATGAGAACTTGAAAAACGAATTTCGAAACTTGGAAGAG
AACCAAATTACGATTGATCACGAAAACATGGCTTTGAGAGACACTGTTAA
CGTTTTGACGAACGCCAAAGAAGACTCAGATGTTCGTCTTAATGATATCG
ATACAAAATACCGTGAATCTGTCACCGAGCTCAAAACTCTCTCGATCGGT
GCCGAAGAGCTAGAGAAAGAAAATCTACGTTTACAAAAAGATTTCGAGGT
AGTTTCCTCCAATTTAGCGGAGCTTCAACAAGAAGCAGTCGAAATGGAAT
TAGACCAAGATgcttttaagaaatttttggaGAAACTATCGATGGAGTTG
CAAGAGAAGCTGGGAGAAGAGCACGTCTCTAAGGACACCCAGGCCGACTC
GCTTCAAGAGCAAGCGGAGATTGTCGGCCGCGAGATCGTGGCTCATTTGA
ATCCGTCCAGGAAATTACAAGAGGACTACGAAGCTATGAAGGAGGATAAA
GAAGACCTAGAAGAGGAAATCCAATTCTTGAAATTTGCTTTATCCAATCG
TATGGAGATTAAATCCATGCAGAAACCGGTTGAGAAGTGTGATTGCTCGA
AAGAAAAAGAAGTCTTGAAACGTGACTACGAGGAAGCAATGGGACGGTTA
GAGAGTTTAGAAGACGAGGTGAACAGGCTACACCAAGATAAACAACAATT
GTTGATGAGCTTTTTGAACTTACAAGCGTCTCAACGGTCGTCACGTGATG
TGAGCCGGATTGACGTTGGCATGACGACAGATGATGATTTGTCTGATGAA
GAAGgTACACAATCTTCAGGTTCTTATCATTCATCACGTCGAAACACTGG
TACCAGCTCTAACGGGGATACTAGCGACCTCCAAGAACGCTTAGAAGACG
CTCTCAATCAAATTGAACGCTTAGAAATCGAGCGGGAAGAAATGCTGGAG
TCGCTCTGCAAGCAGGCTGATGCTAACAATGCTCTAAAAGATGAGATTGA
GGATCTGAAGAACGGTGGCAATGGCGGTGGATCTTCTAGTAACGTTGATA
CCCGACCCAGTTCGCGCACGGGAAGTCGGCCTAATAGCGCCATCTCGAAG
AGTGAAAGCATGGCCAGTATTTCATCGGAACGATGTCCAAATTGCATAGA
AAACACTAACGAGATCCGCAAGTATCTTTCCATCATTGAAGAACTGACCG
AAGACAAACTACGTCTCGAACGAATGCTGAACGATCTGGAACTAGACAAA
GACAAAGCTGAATCCGACCTCGCTAAACTGACGGAAGATTTCTGTCAGAT
GGAGAGTGAAATGACTTTAGTAGACTCTGAGAAGGAGAGCACGGTGCGAA
GCGCAAAGGAGGAGACCAAGTTGTTGCTACGCAACATGCAATCGTTACAA
GAGGAGAATCAACTGTTGGAAGAGAATCTGAAGAACTTGGACGAGGACCG
ACGCGAAGTGCTCCAGAATTTGAAACAGGCCGAGGAGGACCGGTTAGGTT
TTATCCGGACTTTGCAATTGATAACGGAACAGAAAGAAAGTGTTGAGGAA
CAAGTGGAACTTTTGAAAGCGGAAAACGAAACGCTCAAAACTGGAGGCTA
TTAATCgctgtgatgacgtcatcaacgaGCACGAGGAGTCTGGCGGCGAC
ATTGCCGGCCAAGAAGATTTCGAGCTCGTCCAACGTTTGTTATCGCAAGA
ACAAAAGGCGGACTTACATCTTGCGCTTAAGCGCTCTATCTCAACGCCCC
TTGGGGACTCGGTAACGCCCACGACGGAGAGGGCGCCTTTGGAACGTTAC
CATTCAACGGCAGTTACTTCGCCACGTGAACACCCGATACGGAGAGCAGA
TTCTGTAGAAGACATTGCTACGGGGGAGGACGAAAATAAAGAGTTGGCAC
GCCAGCTAATCTCTTTGAAAAAcgaaattcttttatttaaaactaaaaac
atAGAATTGAATAAATCATTAGAGAGATCGAACACGTTATTACGGGAAGA
ACGAAAACGTAGACTTTCGGAACGTAGCCCGGCCACGACGCCCGTCAAAG
AATATACGAACGTCGAAGTTGATGTTCAGCAACAGCAACAAGAACTACCT
TTGAATACCATCACTGAGCTACCCGATATGGGTGAACGTGCTGACTATGT
ACCGACGCGCCGGCTAAGCGGCGAACGTCGTCGGTCGGCCGAATTTAAAC
TTTCGGAAGAGCTTTTAACGAGACCACGTTTGTCGTCGGGATCGTTTATT
TCCGAGGACGAGGTGGCAAATCGTCGGAAATTATACGGACAACGGAAATC
GTCAATGTCGTTAGACGAAATGTATAATTTATTCGGCGTGACGGAGAAAA
ATAATATGGAAACAAAAGTCTTACCGATGTGAATTTCTTCCGTCTCTCGT
TTTTTGTTGTTGGATTGATAAATTGGTTGTTTATTATCTCGTACAATTAG
CCTTTTACCCACAttgtaaaaataaaagattttttgtagtATATTTTCTA
AACTAGGGACTTTTTTATTAGATTTGTCACTACTGGTTTTACATAGTTTT
TGGAAAGCAAATTGATTAGGATGATGTGTTTTTCATTCATAAATCGCCGA
TTCCTTAACTATTGTCGaaatatacaccttttcgaccatagccgccaatt
gctgcgcgggcatttttttgtccgttttaccaccctaaaaccgtcccagt
ctttttttcgcgtccaacagaaaaaagtgtaaaaaaaggattggatcgag
tttagttgGTTAAAAGTGGCACGCACCTGACCGCgcaactacggtcgaaa
aggcgAATTTTGGTACGGAATAACCTTGCTTGTTCTGCTTAAGTTGATTG
ATCTTGTCTATCTCGTGATACTAAATGGGTTTTACATTGGCGGTGTTAGC
TTTCTACCTAAAAACCTCAAAtttagaaatgtttttttttgcatgtgTTT
CATGTTGTCTTTTATTGTTGAAAAGGgaatattttataaataatactttt
ttgtctCCTTTGTAAATAAAAGAATACTTTTGTTATTAAAAAATACCATT
TTACGAATAACAGTGCCCACCCCTATTGAAAATCTTATGGAAATGGAGCA
AAAGCCGTAGAATGGGGATTTCTACATCCTTCTTTTTCGCATTTTTAGGC
GAATTCCAatgtactttaatcgtagaaattttagcgagactaattttagt
gtattagcgagtcaggaaaatcttgatttttttggatttattttagcgaa
tcacgatttcaaaaaatttcgcgtggataaatttcaACGAATActtgtat
tacattattgactgaattcgttttctagcatttctttgcactgaaaccct
tcctattgataaaaatgtatcaaggcaatataacc
Run BLAST on NCBI

transcript from alignment at scaffold_440:425252..439900+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065578 ID=TCONS_00065578|Name=TCONS_00065578|organism=Clytia hemisphaerica|type=transcript|length=14649bp|location=Sequence derived from alignment at scaffold_440:425252..439900+ (Clytia hemisphaerica)
GTTTGTGAGAGATTACACACATCAAAATGTGGTTCTGGGTCGAAGGATAC
TGGTAAGTTTAtatattttgctttttcttcaTAATTCATTTCCACTCAAA
ATATATAACCCAtactaattttcaaatattatttgCTTCGAAATGTGTGC
TTGTTTGCACATTTCAAAGCAcattatatttaaaaatatcTAACTGAGGG
AAAGTATTTTTCATACTTCGGACCGGGGGTCCCTTTCTTAAGGGACACCT
TTCTGCACTACTGTATGTTTTTTATCTGAACTGGGTCCAACGTCTCTGGG
TTTATATCTACTGGAAAGATTTAGGAGTCTTATGTGTGATTTCATTAACA
TGAAAGCACAACCAAACCCAAAAACGCCTAAATTCTTTTAAAGCGATTTA
AGTTTCACAGGaatcttttataaaaataatttcaataaaattattaattt
tgatAGTTTTTAGATTATTCATCGTATCACGATACCATATTTTTATGACA
TTAAATGTTatggagggtgatttgggaaTAATAGTTCcaagtttcattga
aaacatttcaaaatagcctgAACCCCCTGCGAGGGCTATTTGAAATGATT
TCAATAATGAATCAAGGGGCTATTATTCCCATAATAGCATCAAAATTAAA
CAATGGTCTTGCATTAGTTGCACAAAGAATTcgaaaatgaaatatatttg
tttatttttcgtgtctcttcaatgaaagaaattgtacaaaaagtgatgat
ttgttgttgtttgactaaacaaactttcaaaaaatagtactGGATCTTGT
GTAGCCAGTATCTGACTAAttctttgaacattttttcAATGCATTTCTCT
AATAATGTCATTTTGGAATACTTTTTTAGATTCCCAAAAGTATTCACTGT
TGTTCTGTTTACTAAATAATAGTCAATGTTTAGTTCGACAAGAACTGACT
TTGTTATAATTTGTTACCTGGATTTATTACTTCCAGCTGTACAGTAGTTT
TTCTTGGTACTTTAGAATTAGGTAGTACGGTACTGGCTTTAATGGGACTT
GTGAAAAAGTGAAGAGATTTCTGGTTTCAgattttgttgtgtttttgttt
tgttttgataaagatTAGGAACCCATCAATGAACGTCTGATATGACTTGC
TTGACATATGAAATGATTGTCATCTTAAACATTTGTCTGAATTTTGCGAA
GTAGTTTTTGTAATATTACAGTGatttgggtcattttttttttctaaaaa
aggaaatttttggagGTTGGTTGCAACTTTTGctactttttgtatttttt
ttaatatttttaaagtacaaagattttcaaaaatgttctttttaaagaac
tatTAGCAGAATGTTTAATGTGGACTGAGCTAATCATTATATTTAAGACT
TTAAGCCTGTAATTCATTTATTTTTCGCTTTGCAATCTTTTCTTTCTATT
CTATTTTCCAAAATCTAGTAGGTACCCAAACATGAAAATTACATTCACTT
TCTAACCATTACATTGTCTTTCACTTGTATAATTTGAAGACGAGTACCAT
TTTTAAAGGTTATTATAAAAGAGTTGTAAAGTATTGATTGATGGGAAATT
CTAAACTGTCTGATCTGACTTTTCacaattcaaaaagaaaagttggTTTA
ATGTTGTTTTCATGAAATGGGCGATAATCATTTATTCAATTAAGTTGTTA
TCTTTAATAATGATGTTGCTACTTAGCTtgattcatcatttttttaatcA
GCTGCCTTCCATTGCagaaaaagaaacttttatgatcgttttataaaaag
taaaatggtaCCTCTTGTGActgttatttttacattttgaaaattgcttg
TGATTTTACAGTGATTTAGCTTTTACTTCAGTTGCAATgcgttttttttt
ggacttgtatGTTTGTTGTTTTAATACCTAAAGCAGTTGAATTGGCTATA
TATTGTTTATTAATGGGACAGTTTGCTGTCAGTTTTACAAAAAGAGATAT
ATATCATCACTGTAAAATCAGTCATTACTCTTTTTATAATAAGCGTTATG
TGTAACGCTTTCATCGTCATAATATGTGAGCATGTTGTTTCCTTTAGAAA
GCCAGATAGATTGTAGTTTATCATTTATCAGGAAGATTGTTTTTATGTAA
TAGCATCTTCCTTTTCATCATTTCTTCCTttgctttttctctttttcgat
GTAAATGTAATGAGAAATGATATGAAAAAGACTTTTAATCAATTGAATGC
CGACTTGTGCTTCTTATGTTGATGTTACTGTGTTTTATCATTTTCTGTTG
ATGATTGTTTTTTGAAGTAAAGGCAATgttgttcgaaaatcttgtggcta
aaaatttcaaagaaaatttatgTCTAGCAATTTTTAAGTcagttttattg
tttttataatcTTTGGGCAAAATTGCACCATATCATTTTCAAATAGTGTT
GCTTTTTGAAGCATTCGAATGCTTTAGGATTTTGTATTTGATATTATTGA
TATTGTACTCAAtgtacagtcaactctctctctcgttcgaatctttcttt
ctGCAATTCGAACTAAACCACTGATCCCCTCAGCTTGGAGTAGTACCTTC
TGTAATTctaatctttctgtaattcgaactaaaccACTGATCCCCTCAGC
TTGGAATTTAAATGACGTACCttctgtaattcaaatctttctctaattcg
aactaatttctttttccattgaagattgaattagagagagaatCAACTAA
AGTCATGTAACGACAGATGCATAATTATACTTTCCATTATGCTTTTTTAA
GGCAGCACACAAAAGTTTTTAAAGAGTCGTAGATCATTGTTTGTATTTTC
AAACTAAAAGGCTTTGATATCGATTAGTCTGGAACTATACTTTGTAGTAT
TGAATTATTAGTTTTATCTTATATGAAAAGACCAACATTTTTAGCGTGTA
AGTGTTGACTGGACGTTTGGTTTTCTGATTCTCTCAATCAAAAAACTGAA
CGATAACAAAAGAATTTGTGTTTCGACACTTGACTAATGTATCGTACTGA
CAACCTATCAATCGTCTATTTGCTATCTGTTTGATTGATAAAATCAATTC
CTTGTTGTTTTATTGCAGCTTTTTTGTGATGTATCTGGAAATGAAAGGTT
TTTGAATTCTATAAACTTTTTGTTGATTTGTTTTTGCAGTATTGCAGTAT
AACTTTTCCAAAACTTGTGTGTTTGTTTATGTATACTTTGGTTATACTAA
ACAAAAAAGGTCCAAGAAGTCTCTGAAAAGTATATTTAAGAAATAACCAT
ATTATAATAACCACAATCACTCATTCTAATCCGTTACATTACAACGATTT
TTCCTGCATCCAGTTTTGATATTATAGCCTAGATCTCCCTGGTTAGGTAA
ATAGTATAGAGGACCTACCTATCTTACATATGTCGTCCCTCACGGATTTG
AGATAGTAATTAGCTATATCGAGACCCTGGTATCCGATACTGGTCATTAC
AGCACAGCCAATGTTTGTACTAACCGAACAAACTatgatttttcatttca
ttcatatcatttttttcttccctttatttttgtttctgtcCTTATGGTAC
AAAACCAACTGTTTGACAACTGACTATTGATGTACTAAAGGTTTTTTTGA
AACCGCACTATCTCGTTACATCCCTTTATTTTTAGTCGTTTACAAGTTAT
GTTTGGGTATAACAACTTTGACTttttacacaatttttttctcttcttgt
TTGGGACCTTGACAGATTATCAGCATCATGACCGCATAAAGCATATCATA
GTATTATGCAGCCCCTTTAGTTTTATTAGTCGAGTTTACTATTAAATTTT
TCCtgttttataataattttttttattaagccTATCCATGTCCTATATAt
gaaaaccaaaattttgtTATAAGAATCATGATAAAGACTGATAAGTTGCT
TATAACCCACGACGTACAATTTCAAACCTTTTTAATGTATTTCTAGCATC
ATTTTAAAAACGCCGAAGACATGCTCCAAAACCTTATGAGCTTCAAATGG
GCTCCTTTAAATTACCTGTTATAATGAGACATTTTATAGTTCTTTTGTCC
TAACATGAGACAAGTCAGATTTTAATTGTTTCTATCATTAATCTGTTACG
CATAATAAACATTTCTATTGCGGCTTCCTGAGTGTCTAAAAACAAAACTG
TTGTGTAAAAAAGACGAAAATCAATCTCATACGTATAATCttgaatttca
atcattttattAACGACTCGGTGCAGTTACTGATATGAGCAGACAGTTAT
AGTGGTTGCTTTAAAATAGTAGTCTTTTTACTTTACTATAATGTTTCTTC
CTTTGTCGGGGAGGGACCCAAATTTTGGGAGGGAATTTcggggatttttt
ttttgtaagcagTGAAGATTgtcaaaacttaaatttttcaGGTCCTTGGT
CACGAAGAAAGGGAAATCTTACACTGTCTGTATGATGGGAGATCTTTTTT
TACGGAGTAGCTCTctggttttgattttgttttaatCAATTAGTGTCTGA
TTGATAATTGTGTTAAATGTTCATTATCATAAATTGTATTGTATAATCTT
GAACTCAACTTTCATGTGCTATCATGTGATCTTTGTAAGTCCTATCTCTG
TTGCCCAGGACCTTGGTGATAGCTCTTAATAATACAGTTCATTGGTTAAA
GCAAATGAAAAATTCATCTACAGCCAACTCTGCCCAACTTTGTTTCATAC
GATTTGTCGACATTGTAACAAAAAATACTCTCACGTTATTTGAAAACTGC
TAGATACTTTTTGTGAACTTTCTTTTGCCAGAGAACCCTTTCCATGGATG
ATTCTAGTCTAGATTCTAATCTAGATGATTCTAATCTAGATGATTCTATC
TTTACGGTGTCGGCTTTTCGTAATCACCTGAccaattgtaaagtagcgtt
gacttttattagcctttgttgctacctgttcgtcaacttgaaataaacta
ttacacaTACATAGTATCGAGCGATCTAGTCGCAATGAGATATGATTACA
TCTTCAAATGAAGGGATCTCGAGGTGGTGAACAATCTTGAAAGAGTTTGG
GTTGTTGGTGAATATCATCTTTAATAAAGAGTGTATAGGGGGTTTTGCCT
CCAAGTTGATATGAATGAGAAATTTTTCCTGCCAATTGAACCTCAAAGAA
ACCACTTTACCACACAATTCTGAACTTTTCTCTTAAAACTattttacttt
gtttttcaGCAATTCAAGTAATGATAATACCACCAAGAAGAACGTCCTGA
GTTTGAGTAagctattttgaaaatttccggattctcaatttttgatttat
tcAGACTTTTATGGTATTTCGGTCTCCTAGTCAGTGCTTATGAGTCGATA
AATTCCTCTAGGATGCCTCGGTTTTGCTGATTGTCAAAGAATGTCTTTGA
TTTGATCTTTGTCCAATTTCAGCTTTGTCCGAAAAAGTTGGCGTGTGTCA
TCTTTAAAACGAGGCTACAAAATCGAACATCGTAATAAATAATTTCCTCT
AATTTATAGCTCTCAATCTTTCGGACAAAAGCGACGTCGATGAATTATCG
GACATGGAGAGCAGtaacaataataacaataagCCAAGGCGTTCAGCATC
CCTCAAGGTGCCACCAAGAAGTGCTCCAgtaccattggaaaggtaaacat
tTTGATCTCATGTAGTGAATTTTCCTGTacttcgaactaaaacattgggT
CCCTCATGCAAAAAGTAGTTTAAAATAATTCGAATTTTCCTTTAATTCGA
AAAAAGCTGTCGGTCGCACTTGAAGATTGAATTAGAAAGAGGCAACTGta
ttcaatttcttttaaaaaattagacTCTGTAACATCAGACAAAAATAGGC
GATTTTGGAGGTAAAAAGCAcgtcaaaaatataattaaaaagattttcca
tAATAGGCGCATACGCAACCCACCCGCTTATGCTTTCTGGTAAAGTTTTA
CTGTGAGCAGCGCGTGATTTGAATCAACTATGTATGATTGTATTGAGCTT
AGAGGGATAGGGtttataaatattttcacaaGAAATTTGGACTCAAAATG
TTCtgaatttgtaaaaaatatctttaCTAAACAAGGGCTTGGCTATCAGA
TCAATCGTAGTATTGAATGTAAACTTCATGAAAGCAGGATATTTTGTCAT
CTCGCCAATGTTATTTAATTAATGATTTTTGACTGGGAAACTAGTTGTCT
TTGATAATGAGATCACCCCCTTCTTTCAGCAGAAAAGGTTGTTTTTCTAT
GGAGACTTTGATTCCATTTTTGCTAGTTTGGGATCTTTTTATCTCATTAA
CATTTTATTAATGATACTTTGTTTTTGAGCTTATGATATTCATGTGATAT
TAATCTTGCgtttgtgtttactttgagaTGCAATCTGTTGTGATTTCTTT
TGgggaaaataatatttgaaagTATAGGAGCTGTATATCAAGGTCTACGT
TTAGTCTGCAGACTTTCCGCTGTAAGAATATATTCAGCCTTGTTGTGATT
TTGTTTTAGAGATAATGGTCATATATTTAAATGCATATAAACTTTGTGTA
GTGTTGGCGTATACCAGGGTTCACGCTTTGTCTTCAGACTGCGTCAGATC
GAGAGAGTCGcttatttcaagaaaataaattgatttaaCTGAGGGTGCAT
TTTCTCCTTTCCATACTGCAATGAATTGAATACAGTGGCTCGGATGTTGC
CTCGAATCCTTATCTGTAAGCTAAATGGGATAAGATTTTACACTTAATTC
TGTTTGATTATCTTAACTAAAACTTAcaaaaaatttctcatttttttcag
gAAAGTGAGTTCTCCAATTATATCAGCCAATCACTCAACAGATTCCTTAC
CAGACCTCGAAACACCGCGCACTCCGAACAACAGTGCCACTCGCTTGAAA
CGTGACTACCATATCACGGACACGGAAATAGCCGCTCTGCGTGCCATCAT
TAAAAAGGCTGATCTGTACGACCAAACAGTCCGAGAAAGAATGTTTCAGG
TATACCATTTTGTGTTTAGTACAAATGAATGTGTGTATCGTGAGCCAAGT
GTAAAACTTAAGCTGTCGATTTCTTTCACtgttttcatgattttttacac
ttttcagggataaaattatttttgtttgataATATTTGATGGCACTCTta
gccaattttttttacatcaaGTTTAAACAAACTGTTTCAtcttaaattat
ttaaaaagctGCCCTGTAATATCAGCTACTGAACCAGAGATAAGACAATA
AAACTTAACCATAAATTGAATTTTACGAAAAGCGGTCCCACgagtttttg
tttataagaaaattagAATAACCAGAAGTTTCATGtatttttaacaaata
ttttcgaggtttttttctagattttattttcatccGTAACTTCCTATCAT
AATACTTCCTACAATAATAGTCATCTCAATTCACTTTGTATTCAGTTTTC
ATCTAAGCGaatatgattttgatgtttCGGTCGATGGATGCAAATTTCTA
CGTATTTACACTTTTGCATCCATTAGCTTATGACATGCATTATGACTTGA
GCTGATCTATAAATTAATCAAATAGTTAACATTGCTTTTGCGGACAGAAT
AAAATGCGGGAATATTTTTTGGTATCAAgtgaatttgaaataaattgatt
ttaaaactttaaaatttatcTTATTTTATAGCAATCTATTTCGCAAGTTT
ATTGACCTCTGTGAAACGGGTAATATTTTCTTTGTAGGTTTTGAAGATCG
ATGAAACGGACGAGGCAGATGCTGAAGCCATAGCTACCAAGGTAAATAAT
CAAGTAACTTACTCTACTAACTACAAATGTTTCTCTAGACAACTTTTGCG
TTTTCTGTGCGACTTCTTCTTCACTATGTTTGATCAGGTTTTCTCAGGAT
TATCACTATCAGTGTCTTTTTCATACCTCGGTCGTAAATTTTTCACTCGT
AGTTAATTTCAAGTCATAATAGTCACGACTAATACACTAATGAATCTCGA
TAGCTGTTAGTCCTATTCAAATTATAGAACTAGAAGGAACTAGAAAGCCG
GCCAGGTTGATTCTTTATAAAATAAATAGATTAAAAATAGGACAAGTTAG
GATCTGATCGTTTTTACTCTATTGGTTTCTTTCTCTCGCAGGTGGTTAGC
GACAAAGAGATTGAATCACTGAAACAGCGTTTATTTATGTCTCGTAAAGA
ACTCGACTCTTATATCTCCTTCACCAAGAAGATGGAGCGCGAAAAACGAC
AATCCATTTCCGAAAAGGAAGAACTCGAAACGAAGATTCAATGGCACGAA
AGACGTTTATCGCGTTTCGAAAACGAAAATAAGACCCTTAAACAAGAGCG
CGCTAACCTGATGAACCAAATTTACGAGCTCCGTAGTAAATCAAGTAAAG
AGAGCGGACACACGCGACAGAAATCAGTCGACGTTGCGGCTCTTTTAAGC
GAGCAATCGGAACTCGAATCATCTAAGCAACGTTTTATTCACGAAGCCGA
CGTCTTTGCTCAAGAACGTACTAAATATATCAAGGAACGGCAACGACTTG
ACGAGGACAATAGGAAAGCTCACATTCGGAACGTCTCGCTTATCGCTCAA
GTACAACACTGGGAGAAAACGGTTAAAGAACTGGAAACGGAGAAGGAAGA
CTTAAAAACGAGATTATCGAAAATGACTCGACAATCAGTTGATGAACAAC
GAAAATCGATTAGCGCCGGTACTTTAAACAATAACAACAAACTCGAGAAA
ACTGATTCGATAGATGAAACAGACAGCAATAATTACAGTTGTTTGATTGA
AACGATTAAATTCGATGATTCTGAGATCAATCGATTACGAAAGGAACTCG
AAAGCGCGGAAGAACGCTATGAGAACTTGAAAAACGAATTTCGAAACTTG
GAAGAGAACCAAATTACGATTGATCACGAAAACATGGCTTTGAGAGACAC
TGTTAACGTTTTGACGAACGCCAAAGAAGACTCAGATGTTCGTCTTAATG
ATATCGATACAAAATACCGTGAATCTGTCACCGAGCTCAAAACTCTCTCG
ATCGGTGCCGAAGAGCTAGAGAAAGAAAATCTACGTTTACAAAAAGATTT
CGAGGTAGTTTCCTCCAATTTAGCGGAGCTTCAACAAGAAGCAGTCGAAA
TGGAATTAGACCAAGATgcttttaagaaatttttggaGAAACTATCGATG
GAGTTGCAAGAGAAGCTGGGAGAAGAGCACGTCTCTAAGGACACCCAGGC
CGACTCGCTTCAAGAGCAAGCGGAGATTGTCGGCCGCGAGATCGTGGCTC
ATTTGAATCCGTCCAGGAAATTACAAGAGGACTACGAAGCTATGAAGGAG
GATAAAGAAGACCTAGAAGAGGAAATCCAATTCTTGAAATTTGCTTTATC
CAATCGTATGGAGATTAAATCCATGCAGAAACCGGTTGAGAAGTGTGATT
GCTCGAAAGAAAAAGAAGTCTTGAAACGTGACTACGAGGAAGCAATGGGA
CGGTTAGAGAGTTTAGAAGACGAGGTGAACAGGCTACACCAAGATAAACA
ACAATTGTTGATGAGCTTTTTGAACTTACAAGCGTCTCAACGGTCGTCAC
GTGATGTGAGCCGGATTGACGTTGGCATGACGACAGATGATGATTTGTCT
GATGAAGAAGGTGAGTATCTTAGAGGAGGCTcaaaccacagatatctaag
cccgaagggctagatttgcagctttaagctttctccagcaaaaaaaagtg
aagctaaaatttgactttttaaatttcgtgccgatggatNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNagtcacgtgactctggtaggaaatccttccaaagatgagct
tcactttttgaacaaagctgcaaatctagcccttcgggctttacagatat
ctgtggctCAAACCATTCTTTGCTTATAATAACGTCTCCTTtggtataat
gtgcgcgcggtcgactaagttcctatatatcgctcaaccattttcaaaat
tctaagtTCGTGTACGACTACATtacatgacatcaattttcgtatcaatt
tttaaatcctcagatcACTCCGATCGCATCGAAGGATCCTCagtgcttta
tattttaaataatgaGATTGCTCCAAAACGAAAATCttccaacccccgga
ccttattaggacacCAAATAAGTGTAGAAATCCCGAACGTTGTGAATATG
AGATTTTTTTAAGAGAGATAACCATCCTCATTCAATAGTGTATCCAGAAC
ATTCTTTGGACATAGACGAGAAGTAtcacatttttcttcatttaaggTAC
ACAATCTTCAGGTTCTTATCATTCATCACGTCGAAACACTGGTACCAGCT
CTAACGGGGATACTAGCGACCTCCAAGAACGCTTAGAAGACGCTCTCAAT
CAAATTGAACGCTTAGAAATCGAGCGGGAAGAAATGCTGGAGTCGCTCTG
CAAGCAGGCTGATGCTAACAATGCTCTAAAAGATGAGATTGAGGATCTGA
AGAACGGTGGCAATGGCGGTGGATCTTCTAGTAACGTTGATACCCGACCC
AGTTCGCGCACGGGAAGTCGGCCTAATAGCGCCATCTCGAAGAGTGAAAG
CATGGCCAGTATTTCATCGGAACGATGTCCAAATTGCATAGAAAACAGTA
AGTCACTTATCTCATGTAACACTTGTCAATTTCTCGAGGTCAACCGAtcc
tgaattcctcattttcgATTTTGTAATAATGGATTTGAAACTAAGCCAGT
ATATCTATTCATAATTTTGTTTGCCTATTCTACAAAAACATTCcacagct
ccattaaaaacgcagacaattcattccaattcttaTTCGACACTTTGCAG
TCAAAACATCGTAAGCtctctggtcattaaaatgttatattaaaGTGAAG
ACATTGCGGTGTTGAATCGAACAATTACGTCACGTGCTATCTTTTGTTTT
GACGGTTGGTTGAATAACTGCAATCTTTATGCAAGCTCAGCGTTTTTGAA
GCAGCAATTCAGACCTCGGaaaacataatttcaatttGGCTTTAATGTAT
GAATCGATATGCTCACAATGcaacttttattttcaatttaccAGCTAACG
AGATCCGCAAGTATCTTTCCATCATTGAAGAACTGACCGAAGACAAACTA
CGTCTCGAACGAATGCTGAACGATCTGGAACTAGACAAAGACAAAGCTGA
ATCCGACCTCGCTAAACTGACGGAAGATTTCTGTCAGATGGAGAGTGAAA
TGACTTTAGTAGACTCTGAGAAGGAGAGCACGGTGCGAAGCGCAAAGGAG
GAGACCAAGTTGTTGCTACGCAACATGCAATCGTTACAAGAGGAGAATCA
ACTGTTGGAAGAGAATCTGAAGAACTTGGACGAGGACCGACGCGAAGTGC
TCCAGAATTTGAAACAGGCCGAGGAGGACCGGTTAGGTTTTATCCGGACT
TTGCAATTGATAACGGAACAGAAAGAAAGTGTTGAGGAACAAGTGGAACT
TTTGAAAGCGGAAAACGAAACGCTCAAAACTGGAGGTGAGTTTATGATAT
GATATGAGGTGAAGTGGATGTATGGGATTGTTGTTTTTCATCACTTGATC
AATCAAACCCCTCCCCCTCCCCGActctcttttctttttacataacCTGG
CAAGGTTCTTCTTCCCGaccttcaatttcaaaataatgtCAAAGTAATAA
TTCCCCGCCATTGTCATCCCTATTTCGGGAAATTATTCCGTTTAACGATT
TCAATTTCCTTCTCCTTTACGAAAATCGCCTTCTTTTAAACACcactttt
aatttttatctGCCTAATTTTTCTAATGAAAACCAACGGTCCATACATCC
ACTTTTTTCTTggcttttgaccatttttctaaCGTTTGCTACTAATCAAA
ATGACCTCTTCTGATTTGTATTTTAGTGACGTTTTGATAAAGGAAAGTAG
TTATTGTACTTTCCACTTTGCTTTTTACGCACGTATTATCTTTACCGTAA
ATTATTTTTATGACAATTTGCTTTTTATGACAATTTGCTTTTCAATTAAT
TATCATGCATGGTAATAACTCTTGTATGACACTCGTTAACTTCCGATTTC
GCGCACTTTTACGtttaacaaatatttctatGCACACTTTTGAACGATAT
GCATAACCTATTTTTGTACGCACATAAAGATAGGAACGTTTTCACACCCG
CGCACGCACATAATGACACGAACCCTTTGCACCTACACATTAGCTGGCAA
gctaatttgataaaaaaggtaaattttaaaagaatttaaacTTTAAAAGG
TTATAGCCAAACATTCCATCATAGTTTTGCAATGTCTTCTTGAGACCACT
ATAAAGAAATTAGCTTGCCAACCACTCCCAGTCACATCGTCTTGTGTTAA
ATTCTTTCGACTGCAAACGACGTGTCAACCCAAACTCAACGCAACCGAGA
AAAACTGAAACCAGCAACAACTAACATTATAACCGACATGCGCGAAATCG
GACGGAGAGAAAAAATATTCCTATATTGGTAAGATTCATTTTccttctgt
ttttctttttcataaaaagtcaCAGGCAACTCAATTGTGTCTCCTTCGGA
TTTACCAAAGGCTATTAATCgctgtgatgacgtcatcaacgaGCACGAGG
AGTCTGGCGGCGACATTGCCGGCCAAGAAGATTTCGAGCTCGTCCAACGT
TTGTTATCGCAAGAACAAAAGGCGGACTTACATCTTGCGCTTAAGCGCTC
TATCTCAACGCCCCTTGGGGACTCGGTAACGCCCACGACGGAGAGGGCGC
CTTTGGAACGTTACCATTCAACGGCAGTTACTTCGCCACGTGAACACCCG
ATACGGAGAGCAGATTCTGTAGAAGACATTGCTACGGGGGAGGACGAAAA
TAAAGAGTTGGCACGCCAGCTAATCTCTTTGAAAAAcgaaattcttttat
ttaaaactaaaaacatAGAATTGAATAAATCATTAGAGAGATCGAACACG
TTATTACGGGAAGAACGAAAACGTAGACTTTCGGAACGTAGCCCGGCCAC
GACGCCCGTCAAAGAATATACGAACGTCGAAGTTGATGTTCAGCAACAGC
AACAAGAACTACCTTTGAATACCATCACTGAGCTACCCGATATGGGTGAA
CGTGCTGACTATGTACCGACGCGCCGGCTAAGCGGCGAACGTCGTCGGTC
GGCCGAATTTAAACTTTCGGAAGAGCTTTTAACGAGACCACGTTTGTCGT
CGGGATCGTTTATTTCCGAGGACGAGGTGGCAAATCGTCGGAAATTATAC
GGACAACGGAAATCGTCAATGTCGTTAGACGAAATGTATAATTTATTCGG
CGTGACGGAGAAAAATAATATGGAAACAAAAGTCTTACCGATGTGAATTT
CTTCCGTCTCTCGTTTTTTGTTGTTGGATTGATAAATTGGTTGTTTATTA
TCTCGTACAATTAGCCTTTTACCCACAttgtaaaaataaaagattttttg
tagtATATTTTCTAAACTAGGGACTTTTTTATTAGATTTGTCACTACTGG
TTTTACATAGTTTTTGGAAAGCAAATTGATTAGGATGATGTGTTTTTCAT
TCATAAATCGCCGATTCCTTAACTATTGTCGaaatatacaccttttcgac
catagccgccaattgctgcgcgggcatttttttgtccgttttaccaccct
aaaaccgtcccagtctttttttcgcgtccaacagaaaaaagtgtaaaaaa
aggattggatcgagtttagttgGTTAAAAGTGGCACGCACCTGACCGCgc
aactacggtcgaaaaggcgAATTTTGGTACGGAATAACCTTGCTTGTTCT
GCTTAAGTTGATTGATCTTGTCTATCTCGTGATACTAAATGGGTTTTACA
TTGGCGGTGTTAGCTTTCTACCTAAAAACCTCAAAtttagaaatgttttt
ttttgcatgtgTTTCATGTTGTCTTTTATTGTTGAAAAGGgaatatttta
taaataatacttttttgtctCCTTTGTAAATAAAAGAATACTTTTGTTAT
TAAAAAATACCATTTTACGAATAACAGTGCCCACCCCTATTGAAAATCTT
ATGGAAATGGAGCAAAAGCCGTAGAATGGGGATTTCTACATCCTTCTTTT
TCGCATTTTTAGGCGAATTCCAatgtactttaatcgtagaaattttagcg
agactaattttagtgtattagcgagtcaggaaaatcttgatttttttgga
tttattttagcgaatcacgatttcaaaaaatttcgcgtggataaatttca
ACGAATActtgtattacattattgactgaattcgttttctagcatttctt
tgcactgaaacccttcctattgataaaaatgtatcaaggcaatataacc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041090XLOC_041090Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065578-exon-scaffold_440-1491911889:425252..425303TCONS_00065578-exon-scaffold_440-1491911889:425252..425303Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1510915933:425252..425303TCONS_00065578-exon-scaffold_440-1510915933:425252..425303Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1575043694:425252..425303TCONS_00065578-exon-scaffold_440-1575043694:425252..425303Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1491911889:430511..430557TCONS_00065578-exon-scaffold_440-1491911889:430511..430557Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1510915933:430511..430557TCONS_00065578-exon-scaffold_440-1510915933:430511..430557Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1575043694:430511..430557TCONS_00065578-exon-scaffold_440-1575043694:430511..430557Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1491911889:430811..430943TCONS_00065578-exon-scaffold_440-1491911889:430811..430943Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1510915933:430811..430943TCONS_00065578-exon-scaffold_440-1510915933:430811..430943Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1575043694:430811..430943TCONS_00065578-exon-scaffold_440-1575043694:430811..430943Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1491911889:432102..432300TCONS_00065578-exon-scaffold_440-1491911889:432102..432300Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1510915933:432102..432300TCONS_00065578-exon-scaffold_440-1510915933:432102..432300Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1575043694:432102..432300TCONS_00065578-exon-scaffold_440-1575043694:432102..432300Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1491911889:433039..433092TCONS_00065578-exon-scaffold_440-1491911889:433039..433092Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1510915933:433039..433092TCONS_00065578-exon-scaffold_440-1510915933:433039..433092Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1575043694:433039..433092TCONS_00065578-exon-scaffold_440-1575043694:433039..433092Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1491911889:433443..434961TCONS_00065578-exon-scaffold_440-1491911889:433443..434961Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1510915933:433443..434961TCONS_00065578-exon-scaffold_440-1510915933:433443..434961Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1575043694:433443..434961TCONS_00065578-exon-scaffold_440-1575043694:433443..434961Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1491911889:435798..436148TCONS_00065578-exon-scaffold_440-1491911889:435798..436148Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1510915933:435798..436148TCONS_00065578-exon-scaffold_440-1510915933:435798..436148Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1575043694:435798..436148TCONS_00065578-exon-scaffold_440-1575043694:435798..436148Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1491911889:436596..437036TCONS_00065578-exon-scaffold_440-1491911889:436596..437036Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1510915933:436596..437036TCONS_00065578-exon-scaffold_440-1510915933:436596..437036Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1575043694:436596..437036TCONS_00065578-exon-scaffold_440-1575043694:436596..437036Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1491911889:438112..439900TCONS_00065578-exon-scaffold_440-1491911889:438112..439900Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1510915933:438112..439900TCONS_00065578-exon-scaffold_440-1510915933:438112..439900Clytia hemisphaericaexon
TCONS_00065578-exon-scaffold_440-1575043694:438112..439900TCONS_00065578-exon-scaffold_440-1575043694:438112..439900Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_440supercontigscaffold_440:425252..439900 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.4381	1.32651	2.87317	6.39956	6.90734	7.57872	7.42814	1.42277	4.05609	2.87988	2.61292	0.00730059	15.0256	10.1888	6.64109	8.79771	12.2098	7.61815	19.9407	14.0585	9.36999	5.15766	5.03859	6.84478	13.6883	14.7635	29.1953	21.6468	10.2173	8.14323
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065578 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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