TCONS_00065523 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00065523
Unique Name	TCONS_00065523
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2396

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_44:332001..343736-

transcript sequence

>TCONS_00065523 ID=TCONS_00065523|Name=TCONS_00065523|organism=Clytia hemisphaerica|type=transcript|length=2396bp
AATAGATATCAAATAAGACAGAAAAACCAAAAGGATTCAACAAACAACAC
CATGCTTAAGATGAGGATGAACATTACAAGAATCAGATGCGGATGTTTCT
TCAGGAAATTGGCGCGAAAACCAAAACGAGGCCGAAGAATGTCGAGGAAC
CAACGAACACAGAAGAGTATCGATCATATCAAGAACTCAGTGACAAGCAA
ACAGTATGAAGAATTAAAGAACGCATTCATTGCGTTTGATCGGAATTGCG
ATGGATTCATCGATTCTGAAGATCTTGGATACGTCATGGGCAAACTTGGT
CATGATCTGTCATCTAAAGAAGTCAAAAAGGTTTTCAAAGATATCTGCAA
ACACAGTAATGGCAAGATGGATTTCACAGATTTCGTAGAAATGATGGCAC
AAGATAAATTAGTTCTAACCACAAGCGAACAAGAGATCTTAGCAGCGTTC
CAATTTCTTGATCAAAATCATGATGGATATATCACCATAGATGAGTTACT
ACAACGTTTCCATGGCTGCCTGTCCGATACGGAAGCATCCCGGTTAATGT
GTGAAGCGGACGCTAATGGTGACGGAAAGATCGATTTCAACGAATTCAAA
CACATGATGTTTAATCAAGAACGAAGCATCTCATTGGCTCAATCTGAAGT
AGAATTATACTcatgagaaagaaagaaatctcATCCTTCGAAAATTTCAC
TACTCAAAGAAAAATCGTCCAAATCCACATTTTTGCTGGTCATGTTTACC
ATGGCAACGAATTCATATCATTCGCGCAAGGATTGACGACATCAATATGG
TACCCACAATGCTGTTCGGTGTCATTAGATGAAATACAGTACACCAGAGA
CAcaagaaaaacgaaaattagaacatttttttatagACATCAAAACTAAT
GAATATTGATAGGGAATAGTACAGAGATAACTTGACATAAAGCGCTTCAT
CCAATCAGGGGGAGTCCTGgaccttattttcaaatatgaCAATTTATAGT
ATTCTAGTACCGTTACTCGAGAGGGAGATTTTAACCACCACAAAAATGTA
CTTTTTCGGTCTTCCAGTTGTACCCACAACTTTTTGTGATATTCTTACTT
TGAACAGAAAGATTTTGGTACTGTTATGGTGAAATTTACCCCTCTTAAGT
AGCGGTACTAAATATTTTGGGAAGNATTGTTATGGTGAAATCCCTCCTAA
GTAGCGGTGCTAAGTATTTTGGTAAACATTATCTAATCGTCGTTGCCATT
GATgcaaaaggtccaatctcaaaattagtgtcTGAGAAAACTCAGGTTTA
TTTTGCTTTGGAGGTTAGCCCTTTTTCTTGTAAGGATCATATCTACACAC
TAATTATATTATACTAAGTCAGATTAGACCTTTTGCCTTGATGACAGCGc
tttcttgatattcatgacgtaatcttttgtacggaaacacccgaaaaaca
cCGGGCGTTTGCTATCAGTTTTGAATTTATATAACTAAACTGGTGGTAAA
CGCCCGgtgtttttcgggtgtttccgtataaaattTTACGTCGTGAATAT
CAAGAATAATGTAAGGCGTCCTTGATAATCAAGAGATAGAACAGGTAGAT
ACAaaagttattttacattttttactaGAATCCTAGCAAGTATAATTGTA
GTAaactttttgtacaaaaatgttcctttttaccacattctacttttttg
tttGTGGTGATCGCAATATTGTAGGTCATCAAATGtaaaatttctttaca
atatAATGTACATAAAAAGTTATGGATTAAAAAACATTATGTTCCCATAt
ttgttaaaaacaaaaatcgTCTACGGagtaaaaatttaagaaatcaTTTT
GCAGGGATTTTTGAGTTCGTGTTTCGACTGgctaacttaaaaaaaaactt
aaaacgtTTTTACGCAACTAACGGAGGTACAAAGAGTTTCGAATATTCAA
ACAAGTAGGTCCAAGCTTTAAGAATATAAGGTTTTAAAACTAGAACCAAA
TCTTATATTAACGAGAATTGTTTCGAAATTTTATATCTCGACAAATGTGG
GTCCAATACATACGTGATCTTTTTTCGTTAGACTcgaaaacaaaatttcg
agaatcCTTTAGCggtaaaatttaccaaaaatttAACTCCTTTTGAAATG
GCCGGTATTTGGTCTTTTCCATTCTTCCTTACCATCATTTCCAAGACTTG
GCGAAGTGGCAACCATGCTTTCAATGGCCGGTCAGTATAAGCACTTTGAT
TGGATGATGATTTTGGCAACAGTTTGGATGGCAAGCGCCGATCAATCAAT
TGACAGCTGAAACATTCTCCGCGTAACGTCACCACATGAACATTATCATT
TCTTCAAAGTGTTGCTATGACGAAACCgtaaaaataataaagtaaC

Run BLAST on NCBI

transcript from alignment at scaffold_44:332001..343736-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00065523 ID=TCONS_00065523|Name=TCONS_00065523|organism=Clytia hemisphaerica|type=transcript|length=11736bp|location=Sequence derived from alignment at scaffold_44:332001..343736- (Clytia hemisphaerica)
AATAGATATCAAATAAGACAGAAAAACCAAAAGGATTCAACAAACAACAC
CATGCTTAAGATGAGGATGAACATTACAAGAATCAGATGCGGATGTTTCT
TCAGGAAATTGGCGCGAAAACCAAAACGAGGCCGAAGAATGTCGAGGAAC
CAACGAACACAGAAGAGTATCGATCATATCAAGGTAAGAGAAAACGAAAA
ATATTCATTTCTAAATGCTGACCTCTGAGTATTGACATGGGACCACTATA
ACCAAGAAACATAGGAGAAATTATATCCTATGTTTCTTGCTAAGACATAG
CCGTAGGCTAGAGTCGAATTTCCAATGTAGTATTTGAAGCCACTTATTTC
CTATATATTCATGATATGCACCGTTGCAATGTCTTCCACGGAACCAACAG
CTGATTGGTTCAAAGTGACGTATTGACTGATTTTACGTCACTTACAACCA
ATCGGCTATTAGGTCTGTGATGTAATGTCAGAAGACATTGGTGGATATCA
TGAATAGTCTGTACGCAGGCGTGGTTTATACAAATGCTAGATTGAAAGTA
TCATTTAGCAGCAGATTTGAAAAATGTGAAAACCTAAAAACAAAGGAAAT
GCTAGATTCAATTCGTCATCCAAAATAGGGTGCAAATTTTAAGGCTTGAC
TTTTTCTTGCTTGGGAAGGGTAGAAGGTTCACCTCTAGCTTTCGGCTTGA
AACTAAATGCATTGAAAAGTCTGTCGGGTTTGAGTTATATTTTACGATTT
TTTTACATTCTCGTGAGCTATAAGTGGAATACCTCCTTCCCACCCATTAA
ATAATACCAGTTGATGATCAGAGATATCTTGGTGGAAATTTCCATTGATA
ATACAATAACAAACTGTCATACTGGTGGGAACAACAGGTCTTAAGATTCT
CGCTATAAAAAGGAGTAGTTGAGACTTTCATTGTTTCAGACTGAGTTTCA
ATGATTAGGATCTAATTTATTTCAATTTGTAAGAAAATTCTTTCTTGAAA
GTACTGTACGATATATTTTGTGGCAGTCTATTGGTAGTGTTTTATTTCCT
GCGTATGCTCAAACTAGTGAAACCTCAGGTTCAAAGTATGCTAATATGAA
AGCATCAAGCTTTGCAAAGCTATCACGGCTTTCTTCTTGGTCTGATAACT
AAACCATAATTTCATCAATGAATGTGCTTATGAAAAAGTTCAACACTAAG
CAAGTATCTTAACAACCTTTCTAATGTTAATTTGAATTTGTTAATGGGTC
AACAGCGTGGTAATACCATGCTATTTAGCGATTATATCTCTTCCCAACAA
CGATAAAGTCGCTCTCTTACGTCTATGACATGAAAATGNTTCAATGTTAC
TATGAAATATCATTTAGTCAAAAAAGTAGGATGGATTCTCAAAAACCTAA
AAAAAGTTGTAAAATTAAACAACGTTTTTTTAGGGAAGTAGCTTCTAGTC
GTTGAAATTCAGAAAAGAGACGCAACTTCACCCCTTCGATTCTTTTTATT
TGGAGCTTGATTTTCTGTATATGGGTCTGTTTTCAACGACTAGTTTACTA
GTCTANAATATACCCCTGTCTCAATGAATCAGTGACAATTTTTTTAACAC
TTGGGAAGGAGCAGCTAGACCAAATCTGAAAAGATCAACAATAGAAAAAT
ATCATCTAAATTTGAAAAAATGAAGCCCCAAAAAAGAGAAGAATTTTCAT
TTAAAGGTAGGAGTTTAGGCCTANTGTTTCAAAATAATTTTCACATTGAA
GTGAGGAAAATAAGGTAACAGCTTTATAGCTTGATTCAATTTAGGAGAAT
TATTTTGGACCATTTTTAAGACCCTTTTGAGGTCTAATATTAACACGATA
GAGTGAAGACTGGGAAAAATATTTTTGTTTTTTCGAAGGAGAAATCTTCC
ACTTAATTTGTTCATAAATTATGAAAAAGTGAATCAAAATTGTGTTGAAG
AAAAAACAACTCTTCATGATTGAATATGAATTTATTCTATCTCTTTAAAA
CTCCGTGTGATGGAGAGCCTCATAAAATCATAATTCAAAGAATTCCTATA
CTTTTCTCTTGATTAACCAAAAGAGTGGTTTAAGTGGCCTCTATAAAGAT
GTTTGAATAGTAAAGGCAAAACATAATAATAAAAAATTTTGTTAGGAAAG
CGAAAGCTGTTTAACACTGAGATGCTTCTGATTCAAGCTTACGTATCATT
TGCTAGAGAGGAGAAGTTTTTTAGGATTGAATGAAAAAAAGACTTCCTAT
TACAGCAAAAAAGTGACTCTAATGCAAAAATGTTAGAAAAGTATTTGAAG
ACAATATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATA
GCAACAGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAA
TCATACAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTACACG
AAAACAAAGAAAATAGCAAAGGGTTGTGGAGCAATCTTTTTGATTTTTTA
ACTTGTGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACA
TTTTCAGGTAAAAACACTTCAAACTTCTTTATATCAGAACTGACAAAGCT
CAGCTGTAACCTCAGTTAGGGAAAAGTTCTCCAAGGCTTTATACCACCGA
TATTTTGTATTTTGCCCTTTCTTACTGAAATAAATAAACTCAATCTCAGA
CTGAGACTTGCGAAGTCTTGAACTTTTTCAATTTGTGATAAAAATGATAA
CATCGAGTCTCATTGCTATCATAAAAGAGTATATGATTGTTAAGTAACAA
TACCTAAAGCTACTTTTACGCATGACTCAATGATATCAAGGTTAACACCA
TCTACATAAGGTAATAGGGACCACTCCCTGTGAGTATAAACAAAAAGTTT
TAAGCTTTACATTAGGAAGTCACATTAAAGGTGAAAACTAATTTTGGTGT
GTCAAATATCAAAATTGTATCTTGAAATTGCCATNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCGAAGGAGA
AATCTTCCACTTAATTTGTTCATAAATTATGAAAAAGTGAATCAAAATTG
TGTTGAAGAAAAAACAACTCTTCATGATTGAATATGAATTTATTCTATCT
CTTTAAAACTCCGTGTGATGGAGAGCCTCATAAAATCATAATTCAAAGAA
TTCCTATACTTTTCTCTTGATTAACCAAAAGAGTGGTTTAAGTGGCCTCT
ATAAAGATGTTTGAATAGTAAAGGCAAAACATAATAATAAAAAATTTTTT
TAGGAAAGCGAAAGCTGTTTAACACTGAGACGCTTCTGATTCAAGCTTAC
GTATCATTTGCTAGAGAGGAGAATTTTTTTTAGAAAGACTTCCTATTGCA
GCAAAAAAGTGACTCCAATGCAAAAATGTTAGAAAAGTATTTGAAGACAA
TATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATAGCAA
CAGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAATCAT
ACAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTACACGAAAA
CAAAGAAAATAGCAAAGGGTTGTGGAGCAATCTTTTTGATTTTTTAACTT
GTGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACATTTT
CAGGTAAAAACACTTCAAACTTCTTTATATCAGAACTGACAAAGCTCAGC
TGTAACCTCAGTTAGGGAAAAGTTCTCCAAAGGCTTTATACCACCGATAT
TTTGTATTTTGCCCTTTCTTACTGAAATAAATAAACTCAATCTCAGACTG
AGACTTGCGAAGTCTTGAACTTTTTCAATTTGTGATAAAAATGATAACAT
CGAGTCTCATTGCTATCATAAAAGAGTATATGATTGTTAAGTAACAATAC
CTAAAGCTACTTTTACGCATGACTCAATGATATCAAGGTTAACACCATCT
ACATAAGGTAATAGGGACCACTCCCTGTGAGTATAAACAAAAAGTTTTAA
GCTTTACATTAGGAAGTCACATTAAAGGTGAAAACTAATTTTGGTGTGTC
AAATATCAAAATTGTATCTTGAAATTGCCATTAGATGGACAAAATACACG
CTTTTTTTATAAGAATGGTGTTTTTTCAATTCATCATAAATATTCTTAAC
TTTTTTAGGAAAATTGAAATTGAATGATAGTTGAAAATTCAGTTGAAATT
CCATGATAGTGGTATTCTTTCCTTATCCTTAATTTTTTTTGCTAATTTCA
TCATAAATATTCTTATAAAAAAAGGTTGTACGAGGAAAAGAAGGAAATTT
TTCGATAAAACGTTCTTCTTAGCCACGTTTTTTGATGTTTGATGAATTAC
TATGAGGTTTTTCTTCTCTTGTTTGATCAACTTTATCAACAACGCGTCTT
TACTGAAAGGTGGACTGGAAACAAGGTTACACACCAAGAACACGAGATGG
AAATCAAGGGAGCATCGGTTTTCGCACCTATAGAATTTCCCGCCAAAATT
AGAAAACAAACGCTGACATTGCACAAAAAAAAGTTCTTGTGCGCATGCGC
TTAAGGCAGAAGACAGAATTCGCGATATCTCATATTTCGTTTTCGTAACA
TACACGTTTTTTTATAAGAAACAACTATATAAGAACACAAGGCTTCGATG
GCCGAAATGTTAAGAACAAGTTAAGAACATTTTAAGCCTTTGCCGACTCT
AAAACAGCCGAAACTCAAAAATTTAAGAACATCTGAAGGCTTCAAAAATT
TTGGACGTTCTTATAAAAAAAATGTGTACCCTCTGACAAAATGTAACAAG
ATTTCGTCACATCAGTATTTTACAGAAGGTGAAACAAAACTGTCCCAAAT
AGTCCCGACTTATCCCCTAAAATGTATTAAACAAACAGAGAGCGATAGAA
AACAAATGTAAAAGATAGAGGTCATATAAAAAAGTCAAAGAATAATAATC
GATAAGAAATATAGGTCCAACAAGCAAAAATCTTGAGAACTCTGACTCGA
ATGTAGGACCTGCTATAAGGAGATACATATTCATCTACGGATGAATTTTT
CTGATCTGATTTAAGCCAATTTCACTTGACATTTAGATTTAGACAAAGAA
ATGACAATATTAAAACTTTTAAAGTGATAAAATTTGGTTTAAAAAAAGTT
TCTATTTTTGTTGCTTATAAAAAATGTCAAATCTCAGTGTTAAAAATAGA
TGACTTCTTTAAAATAGTCGGAAAAAATATTAAAATCAAAACAAAGATAA
ATAAAATGCTGGAATGTGTAAAAGCNTGTGAGTATAAACAAAAAGTTTTA
AGCTTTACATTAGGAAGTCACATTAAAGGTGAAAACTAATTTTGGTGTGT
CAAATATCAAAATTGTATCTTGAAATTGCCATTAGATGGACAAAATACAC
GCTTTTTTTATAAGAATGGTGTTTTTTCAATTCATCATAAATATTCTTAA
CTTTTTTAGGAAAATTGAAATTGAATGATAGTTGAAAATTCAGTTGAAAT
TCCATGATAGTGGTATTCTTTCCTTATCCTTAATTTTTTTTGCTAATTTC
ATCATAAATATTCTTATAAAAAAAGGTTGTACGAGGAAAAGAAGGAAATT
TTTCGATAAAACGTTCTTCTTAGCCACGTTTTTTGATGTTTGATGAATTA
CTATGAGGTTTTTCTTCTCTTGTTTGATCAACTTTATCAACAACGCGTCT
TTACTGAAAGGTGGACTGGAAACAAGGTTACACACCAAGAACACGAGATG
GAAATCAAGGGAGCATCGGTTTTCGCACCTATAGAATTTCCCGCCAAAAT
TAGAAAACAAACGCTGACATTGCACAAAAAAAAGTTCTTGTGCGCATGCG
CTTAAGGCAGAAGACAGAATTCGCGATATCTCATATTTCGTTTTCGTAAC
ATACACGTTTTTTTATAAGAAACAACTATATAAGAACGCAAGGCTTCGAT
GGCCGAAATGTTAAGAACAAGTTAAGAACATTTTAAGCCTTTGCCGACTC
TAAAACAGCCGAAACTCAAAAATTTAAGAACATCTGAAGGCTTCAAAAAT
TTTGGACGTTCTTATAAAAAAAATGTGTACCCTCTGACAAAATGTAACAA
GATTTCGTCACATCAGTATTTTACAGAAGGTGAAACAAAACTGTCCCAAA
TAGTCCCGACTTATCCCCTAAAATGTATTAAACAAACAGAGAGCGATAGA
AAACAAATGTAAAAGATAGAGGTCATATAAAAAAGTCAAAGAATAATAAT
CGATAAGAAATATAGGTCCAACAAGCAAAAATCTTGAGAACTCTGACTCG
AATGTAGGACCTGCTATAAGGAGATACATATTCATCTACGGATGAATTTT
TCTGATCTGATTTAAGCCAATTTCACTTGACATTTAGATTTAGACAAAGA
AATGACAATATTAAAACTTTTAAAGTGATAAACTTTGGTTTAAAAAAAGT
TTCTATTTTTGTTGCTTATAAAAAATGTCAAATCTCAGTGTTAAAAATAG
ATGACTTTTTTAAAAAAGTCGGAAAAAATATTAAAATCAAAACAAAGATA
AATAAAATGCTGGAATGTGTAAAAGCTAAATGGTGTTGCAGGCTAATTGC
ACCATTTTCGTGTTTTCATAGCAAATCCTACATTCATCAAAACGTCAACA
GACATTTTAGCAGCTTTTATAATTGGACTCCGGGAGAGTCCATTATTTAT
AAAGTGTTTTATAATCAGATCAGATTTGACAAAACGTTATCGTTATTTGG
GGGTGAGGACATTATGCTANATCAGAGTTGACAAAACGTTATCGTTATTT
GGGGGTGAGGACATTATGCTATAAGATTTCAAAGTGATAAGACCTTCACT
CCAGGAGATTTAATAGTATACAGTGTATTATTATGTTAAAAATTTGAGCT
TGAATTTTGCTTCAATTTTATACCTACACGTGCTTAAGAGACTGTAGTGT
TGAAAAGGGTTTTCACTGACAAAACTTAATTTCGAGATGGTTAACCCAGC
AGTATTTAACAGTAACTTTGGTGAATGGAAAAAGAGAACGAAAAAAGATC
GTTACATGATTTTACCACAGGATTTGACTTTGTTGAAATTGGTGAATTTT
GAGGACTTTGTTGTCATGGATGTCATTGATAATATAGATTTTGGCAAAAA
GGTAGAATAGATCCGCCCTTTTGGTATTTTACCAAAGAAAATATCTAAGC
CACCTTAGCTTTCCTGTATCATACTGTATGACAGAAGAAAGCTCTGAAAA
AGCAGCAGAAATTTTAAACCTTATTTCCCTTTATTTTTCAGAACTCAGTG
ACAAGCAAACAGTATGAAGGTAAGAAAAACTATTCAGTACAAAACCCTAT
AGTCGATAATGAAGTGATTGGCATGCAACTACGCGATTGATTGAAATCTT
ATTTTGATATCATCCAAAGATTTAAGCAGAATATAGACTTGAAAGCATGA
ATTCAAAATTATAATTTGGGCCCAACATTGATGTCTCTTACCCCGATTAT
TTCGCTGCATGAATTTATCTTGACAACATCCATTTTCTTTCCTCTTTTCA
GAATTAAAGAACGCATTCATTGCGTTTGATCGGAATTGCGATGGATTCAT
CGATTCTGAAGATCTTGGATACGTCATGGGCAAACTTGGTCATGATCTGT
CATCTAAAGAAGTCAAAAAGGTTTTCAAAGATATCTGCAAACACAGTACG
TAAAACTAAGTATTACTTTCAGCCTTGGCTTAACTAGACTGAGTTTTCTT
CGACTGATCATAAAGCCATAAACCAATATTTGGGATTATCTTTATTAGGG
GCCTCTGCTAATCCTCAATCCTCAAAAATGTTCTTACAGAAAGTATGGAG
GTATGTGAATCTTTCGCCTTTTAGTCATTCGCTTAATTAATTTCCTTGAT
AAGTTGGTGAGGTTTTAGCTTGTAAGGGAGATGATGTTTCTATACGCGAA
CTGAAGTGATGCTTTAGATAAGATAAGATCCAAGAGTGGAATTGAGTAGA
TTTTGAAGGATTTCGGTAAACAAATGTTTCCTTGTTTGAACAAAAACCCA
GGAGGAAAAAGGTGTGTCCAATTTTCCCTTATTTCATCATGATTTTTGAC
AAGTAAGTATAAATAAGGGAATAGTTGGAAAATCTCGTGCTATTCTATTC
ATAAATCAAAAAACTACCTTTCCGTGTTTCTCAAACGAATTTCGATAATT
AGGTTCACTAATAGGCTCAGATTATTAAGAAATGACTTGTAGCTTGTATG
ATAATTCGAAAAGCTAATAATCGAAAGGAATTTCTATTACTTCGTTTTAA
AGTGGAGATTTTCTTTTGTTTAAATAAGTCTTAATGAAGACAGCTTGAGA
ATGCTTTACAATGGTTTGCGTCCTGACGCACAGAGGCACTTTATCGACTT
AAAATCGAAATGAAAAGTGATTATCATTTGCAATGGTGACGTTTAGACTC
AAAGGTAGCTTTGCCAGTCCTCGGATATTGCTAGCGTTTCACGTTTCAAG
CCTAAAAATGTTCTTTTTTCATCATTTTGTGAGGATTCCTGTGCATTTCC
TAAGAAATTGGTTGTTGAAGAGTCTACAAAGTCTTAAAATGTTCTTAAAA
TGTTCTTAACATATTCACCATCGAAGCATTATGTTCTTAGATAGCTTGTT
CTTATATAAAAAACGTTCAACACGTTAAAACAGCATCCATTAAACATCCC
CACGGCGTTTAATTAGGACTTATGGATTGCTAGTTTTCGACTACAAATGG
ACCATCGAGATTTCTCTAGCCAATTTAAGGTTGATACCTAAGACCCCCTA
TCTCAACTCCAGGCGAGAAAGTCGAAACAGACAAACCCTTTTTGTCTGTT
GAAAATACAAAAACTGACCTAAAATCATTTAAAATCAATAAAAGATGAAA
TTAAAAAAAAAATTCATACCATAGTTTGACCAAATGATATTTTCTCCTAA
CATAGGTAATGGCAAGATGGATTTCACAGATTTCGTAGAAATGATGGCAC
AAGATAAATTAGTTCTAACCACAAGCGAACAAGAGATCTTAGCAGCGTTC
CAATTTCTTGATCAAAATCATGATGGATATATCACCATAGATGAGTTACT
ACAACGTTTCCATGGCTGCCTGTCCGATACGGAAGCATCCCGGTTAATGT
GTGAAGCGGACGCTAATGGTGACGGAAAGATCGATTTCAACGGTGAGTGA
TTGGTTCAGCCATTTTATTGGAAGATTTTAGTATGGTTATTATTAAAGTC
ACCATTTCATTAGTTTTATTCTTTGAGTTAATTTTTCATTAGTCATCTAA
AGAGGGACATAAAGATTATTTGAGGATAAGAAATGTGTTAGTAAATTGAA
AGCAATGACGGGGCAAATCAAGTATTCATGATATGCACCAATGCAATGTT
GCAACTTTTCTGTTTTTGTTCCACCCAAGACGTCACTTTTTCTATTTTTT
AAGTGACGTATTGGATGGAAAATTTTAAAAATTCTCAAAGACTCTCCAGT
GATGGTGCATATCATGAATATAACAGTGTAATTTTCGACAAAGAAAGCTA
AATTTTCAACCCTTTTGAATTTTGTTTTCCAGAATTCAAACACATGATGT
TTAATCAAGAACGAAGCATCTCATTGGCTCAATCTGAAGTAGAATTATAC
TCATGAGAAAGAAAGAAATCTCATCCTTCGAAAATTTCACTACTCAAAGA
AAAATCGTCCAAATCCACATTTTTGCTGGTCATGTTTACCATGGCAACGA
ATTCATATCATTCGCGCAAGGATTGACGACATCAATATGGTACCCACAAT
GCTGTTCGGTGTCATTAGATGAAATACAGTACACCAGAGACACAAGAAAA
ACGAAAATTAGAACATTTTTTTATAGACATCAAAACTAATGAATATTGAT
AGGGAATAGTACAGAGATAACTTGACATAAAGCGCTTCATCCAATCAGGG
GGAGTCCTGGACCTTATTTTCAAATATGACAATTTATAGTATTCTAGTAC
CGTTACTCGAGAGGGAGATTTTAACCACCACAAAAATGTACTTTTTCGGT
CTTCCAGTTGTACCCACAACTTTTTGTGATATTCTTACTTTGAACAGAAA
GATTTTGGTACTGTTATGGTGAAATTTACCCCTCTTAAGTAGCGGTACTA
AATATTTTGGGAAGNATTGTTATGGTGAAATCCCTCCTAAGTAGCGGTGC
TAAGTATTTTGGTAAACATTATCTAATCGTCGTTGCCATTGATGCAAAAG
GTCCAATCTCAAAATTAGTGTCTGAGAAAACTCAGGTTTATTTTGCTTTG
GAGGTTAGCCCTTTTTCTTGTAAGGATCATATCTACACACTAATTATATT
ATACTAAGTCAGATTAGACCTTTTGCCTTGATGACAGCGCTTTCTTGATA
TTCATGACGTAATCTTTTGTACGGAAACACCCGAAAAACACCGGGCGTTT
GCTATCAGTTTTGAATTTATATAACTAAACTGGTGGTAAACGCCCGGTGT
TTTTCGGGTGTTTCCGTATAAAATTTTACGTCGTGAATATCAAGAATAAT
GTAAGGCGTCCTTGATAATCAAGAGATAGAACAGGTAGATACAAAAGTTA
TTTTACATTTTTTACTAGAATCCTAGCAAGTATAATTGTAGTAAACTTTT
TGTACAAAAATGTTCCTTTTTACCACATTCTACTTTTTTGTTTGTGGTGA
TCGCAATATTGTAGGTCATCAAATGTAAAATTTCTTTACAATATAATGTA
CATAAAAAGTTATGGATTAAAAAACATTATGTTCCCATATTTGTTAAAAA
CAAAAATCGTCTACGGAGTAAAAATTTAAGAAATCATTTTGCAGGGATTT
TTGAGTTCGTGTTTCGACTGGCTAACTTAAAAAAAAACTTAAAACGTTTT
TACGCAACTAACGGAGGTACAAAGAGTTTCGAATATTCAAACAAGTAGGT
CCAAGCTTTAAGAATATAAGGTTTTAAAACTAGAACCAAATCTTATATTA
ACGAGAATTGTTTCGAAATTTTATATCTCGACAAATGTGGGTCCAATACA
TACGTGATCTTTTTTCGTTAGACTCGAAAACAAAATTTCGAGAATCCTTT
AGCGGTAAAATTTACCAAAAATTTAACTCCTTTTGAAATGGCCGGTATTT
GGTCTTTTCCATTCTTCCTTACCATCATTTCCAAGACTTGGCGAAGTGGC
AACCATGCTTTCAATGGCCGGTCAGTATAAGCACTTTGATTGGATGATGA
TTTTGGCAACAGTTTGGATGGCAAGCGCCGATCAATCAATTGACAGCTGA
AACATTCTCCGCGTAACGTCACCACATGAACATTATCATTTCTTCAAAGT
GTTGCTATGACGAAACCGTAAAAATAATAAAGTAAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041059	XLOC_041059	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_44	supercontig	scaffold_44:332001..343736 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.222469	0.135462	0	0.0885666	0.341645	0.120337	0.643792	0.799224	8.6635	7.29505	3.79995	7.91331	1.5154	1.10562	0.0572375	0	1.89809	1.10941	1.30506	1.52754	2.79076	1.75391	1.64917	1.92563	0.774501	0.945867	4.74336	4.58128	0.929153	0.926907

Blast

[Close]

BLAST of TCONS_00065523 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.149e-23
Identity = 53/147 (36.05%), Postives = 89/147 (60.54%), Query Frame = 1

Query:  178 IKNSVTSKQYEELKNAFIAFDRNCDGFIDSEDLGYVMGKLGHDLSSKEVKKVFKDICKHSNGKMDFTDFVEMMAQDKLVLTTSEQEILAAFQFLDQNHDGYITIDEL---LQRFHGCLSDTEASRLMCEADANGDGKIDFNEFKHMM 609
            + + +T +Q  E K AF  FD++ DG I +++LG VM  LG + +  E++ +  ++    NG +DF +F+ MMA+ K+  T SE+EI  AF+  D++ +GYI+  EL   +      L+D E   ++ EAD +GDG++++ EF  MM
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR-KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

The following BLAST results are available for this feature:

BLAST of TCONS_00065523 vs. Swiss-Prot (Human)

BLAST of TCONS_00065523 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CALM3	4.149e-23	36.05	Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1	[more]

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TCONS_00065523 (transcript) - C. hemisphaerica