TCONS_00065517 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065517
Unique NameTCONS_00065517
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length739

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065517 ID=TCONS_00065517|Name=TCONS_00065517|organism=Clytia hemisphaerica|type=transcript|length=739bp
GATTTATCCACTAGCGGTCAAATGAGCTAACGAGCAAGCATGTTGGTTTA
ACGAACGAAGGAGTAAAGATGTCTTCTCCGTCAAGGATAATGATTTTCTT
TGTTAAGAATTTAGATGTTTTTCTCATTCTTTTTGGTGTTGCTGGGTTAA
CTGCAACAATCATAACATATACAAATAGTTTAAAAAAGGATGCTGCTGAG
GCTACTCCAACTCTTAAACTACTTGAAGTACGTAATCCTTTTACACCAAT
ACCAATAACAGTAACACCTAGAATTGAAAACCCCTTTACAGTTACAACGC
ATACTACAACGGGAAAGCacacaacaacgaccaccaagcctccaacaaca
acaacaacaacaacaaccacaacaacaaccaccCAGCCCCAGACAACTGT
TATAATCACCTATTCACCACACGATTGCATTGAAAATAGTCCATATCTGG
TCAATGGAACGGGTTTATCTGCCACTGGATCGCAAACAGTATTGATAGGT
GTCGGGAGCAATACGTTGCCTGAATGCTCAATTTTATGTAAAAATCTGTC
CATGTCCGCAAATAACTCACGAATTAATGCAGCTATACTCATCAAGGAAA
ATGGAAGTTGTTTATGTCAGCAGAATGTCATTATTGTTGATTCCAATACA
ATATTATACAGTACATGTATCTTTAAAGAAGCAGAAGACACAGGGTTGTT
CTATGAAAGTAAGTTAGTTTTTCACGTGCCACCATTAAA
Run BLAST on NCBI

protein sequence of TCONS_00065517-protein

>TCONS_00065517-protein ID=TCONS_00065517-protein|Name=TCONS_00065517-protein|organism=Clytia hemisphaerica|type=polypeptide|length=223bp
MSSPSRIMIFFVKNLDVFLILFGVAGLTATIITYTNSLKKDAAEATPTLK
LLEVRNPFTPIPITVTPRIENPFTVTTHTTTGKHTTTTTKPPTTTTTTTT
TTTTTQPQTTVIITYSPHDCIENSPYLVNGTGLSATGSQTVLIGVGSNTL
PECSILCKNLSMSANNSRINAAILIKENGSCLCQQNVIIVDSNTILYSTC
IFKEAEDTGLFYESKLVFHVPPL
Run BLAST on NCBI

transcript from alignment at scaffold_44:246026..262628-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065517 ID=TCONS_00065517|Name=TCONS_00065517|organism=Clytia hemisphaerica|type=transcript|length=16603bp|location=Sequence derived from alignment at scaffold_44:246026..262628- (Clytia hemisphaerica)
GATTTATCCACTAGCGGTCAAATGAGCTAACGAGCAAGCATGTTGGTTTA
ACGAACGAAGGAGTAAAGATGTCTTCTCCGTCAAGGATAATGATTTTCTT
TGTTAAGAATTTAGATGTTTTTCTCATTCTTTTTGGTGTTGCTGGGTTAA
CTGCAACAATCATAACATATACAAATAGTTTAAAAAAGGTGAGGTTTTAT
CTTTTGTTCAATTAGGAAAGTTTTCTAGGATTAACCGTGAGTGGTCCTAA
TTCCGACCCCCCAAATAAACTGTTATTTATGAAAAAAATTCTATGTTTAC
AAACATTCCCTCTCCAAGTTGAACGATAAACTATTGCAAGAACTCTCGAA
ACGAAGCATTTAACAAGATGGCTATAATGTCAAGATGCCAATTAATGTAT
ATAATTTAAAAAGTGTGAATTGTAAAAAATAATAGACCTTTCAGTCAGGC
ACATCCTGGCAAATGAACGGGGTATTTTTCACTTGCGATTGGTGGCAAAT
GCAAGGGGTCGAAAACAAAAGTGATGTAATAGCACTGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTAGATGAAATTTTTTTTCCATGGGTCAATTTTGTCTTCGAAGAT
TGAAGAAACTTTTAACGAAAAAATAAAGTTCCCAGTTTTCTTCCTTTTTT
CCCATTTTTAATTTGAAGTTCATTTTTATTCATTTTCACGCTTTTAGCCT
GAGACGTCCTATCTCATTTACACTGGGTGACGAATACCCCATGCAAATGC
TCACCCCGTTCATTTGCCAGGATGTGCCTGACTGCCTTTTTTCAAAGAGG
CCACCCTGTTGAATAATTCAGTGTGGCTCGAATCTCTCAGATCCTTGGTT
AGAAAAAGCTATACCTGTTTACTTTTTTCTTGCCAGATTCAACAAGCCAT
CAACCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNACCTGAAAATAAAAACAAAAAGATTATCATATTATTTTTG
CATGAATTACGCTACCTTATACGTCATTATAAAATTATACAAAACGAAAG
CGAGTCTAGGGTCTAGGCCGCTCGCCTAGAGCGCGGGCCCTAATATTTTT
TCTCTCACGGTCTTCAGGGGAAAACGAAAGTGATCGATATTCTTCGAAGG
AAGAATTTGCCAAACAAACCCCTAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCTCAAGCTAAAAAGGTTACGGGTTTTGGGCAATCGAGGCAAAAATCA
GCAAAAAGCTGGTGTTTTCCGTAAATCTGAGAATCGCGATAAGATCCTCA
CTGTAATTATGTAGTCCAGCAGAAAAACAATGATACACCCATGTATAATT
ATTACAATATGCATGAAACAGTAATAGCAACTCCAGAAGATTTTTCAAGT
TTTAATTTTTTTTTCAAAATCTATCCTATCTTGTAGAGCTTTGAAAAAGA
AAGAAAATGAGGGGTCATAGGCCTCCANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNAGCATACATAGAAGAAAAGTTAGA
AGGGTTCAAAGTTCACGGAAAAATGAAACATTTGGTTTGACGTCAACGAT
AGTTGCGTGACTTCTGGAGTCGCTAACAGTAATTATGCATTGTTGTATCA
TTGTTTGTATGGCTGGACTACATAATTATTCAACAGGGTTGCCTCTTTGA
AAAAAGGTCTATTACTTTTTATGATGCTGTTACTGCCAGTCAGGACCTCT
TTGGTCTTTTTTAACATTAGTTCGGATAGAATAAAAACATACCTGATCAA
CACAACCAAACCTTCTGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTAAAA
TCCACAAGTAATGAACCTCTTATAGCTTTATCTGAATAAATCTGGTTGAA
AACCTTTTGTCAGGTTTCATTCCGTACGTTTTTTATCCACGTTGCGAACC
GGTCTCCCCGATTTCCCGATAATTAAAAATTGGAACTTTCCCGTGGGCGC
GATTGGGCGTACCGCCATCGCGAAATATTTTTCGTGAAAATTTACCGTAT
TCTAACGCTAATATAATCTAGATAGGAAACAAATATTAAATTTGATCTTT
TTTTTCTCGTATTTCTATAAATTTCAAGATAAAAAGAACTATCTACAAAT
TATTATTATTAACGGGCGTTGAATCGACATTGACATGTTTAATGATGTCA
TAACCAATGCCGTGCATATTTTGTCAGCGCCGTGCATATTTTGTCAACAT
CCTTTTCATTGGATAAATACCACTAAAATATACAAGATAAGTANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTATCGCCCGCGAGCACGGCTTAGCTAAGT
GCACCTCTCTTATTCATTATCTAAGAATTGAAGTGGGCAAAGATTACCGC
GCGGCTGATAGCGGACGAAGGTTTTTTTGAACATATTTTCAGTTATAATC
CAAGGTAGAACAAACTAAACATAGAAAGGGAGTATTTTTTAGTGCTTTAT
ACGACGATCGGTATTTTTTTTGAATTCTATGTTTAGATTTTTCTACCCAG
CCCCGTTGCTATGTACGCGCGCCCTGTTGCTAAGACCTTTGCTTGAAATC
GAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTAATATTATGATAATCGTTTATTCATTTGTTCTT
TAGTTCTGTAATAATTTTTCAGTTTCTTCTAGGTTCCCCATTGTATTAGA
GAAATCTTTTTTTTTTTTTTGTAAGGGGTTATCCTGCTGTGTTGCAGCGA
AAATATATTCAATTCAATTCAATTCAATTCGACACACATAATTACTTACC
ATAAAACCTCTTTTACAAACTCAAAAGCCTTTCAAAACTAATTCAAACCA
CATCCAACCGTCAGCCACATTCATAAGGGCTCCTTTCCATCAGCCATTTT
GTTTAGAAATGAACCTGTGTTTTCATTTTCATTTGTTTATCTTTTTTTGC
AATGTCAGCTTTTTCCATAAATTATGCGCGCACATCAAAAAATATCAAAA
AACCCGCGAAAATTCTACTCAGTGACTGGGCGCGTACTGACCAATTAGAG
ACACTCGCATATGCAGGGACAGATATCCCTGCNAATTAGACGTACTGACC
AATTGGATACAATCGCATATGCAGGGACAGATATCCCTGCCAGAGGAGTT
ACTTGGACCAGACCGTAAACCAGAGACAAGATTATAAAAAACTAGACGGT
GAAATAGTTTACGGTCTGGATATCCAGGCTAAGTAAGTCTAAGCACACTG
TGTTTTTAATTAGCTGAAACTTTTTTTGCGTCGGAAAATCTTTTTCAAAC
TTTCAGCAACGTTTGACCAAACTGTTACAATGAAAATTATCCAGCGCATT
TTTTATCTTCTTACCTTCTTCATTTTCAATGAAGCACTCGAAGTTTACTG
AAGGTAAGCACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGCGCTGCGGTGG
AGTGCATGACGTAACTCGCGCGGCAACTAACTCGCCTTCTGTTGGAAGAT
CATATTGGGCGTTTTGGCGTTACCACCCTCAAAGTAGCGGGCACCTTTGT
CTTTCCGCAACTCTTTCCACCATTTTAGATGGCCTTAACAATAGATCCAA
AAGGGCGCCATAATCTTGGAAAATAATTTGTTTCGGTCTCCGGCTTTGGG
AAGTAGCAATGTTTTTGGTTGTTTTCGATGGAAAATGGTAAGAGACTTAA
GGTAGTTTTTGCTGGCTTATAGAATCGCAGGATCCTGGATGGTTTCCCTA
ACTGAATGTTGATACTCCGAAATCACACGAACAGAGTACTCTCGGGTACC
TAATAGCCGGGGGGGGGGCCGCTAATTAATTTTTCGAAAATTTTCCACCC
AGGACATTCTTATTCCAAACCCCCCGGCTATTAGGTACCCGAGAGTAGAC
GGGTCTCCTAGCTATTACTGCTGTTGTCATTTATGACGTTTTACATATTG
CAATAAAAAATAATGTTTTGTATAAGAAGTAATTGTTCTTATTTTTATTT
GGTTTATTTGGTTCAATGTATCAAATCTCTCAGTTTAGTTGACACTTTGA
CGTATCTTCGTTGCGTCACAACGAAAGGTTTGTTTTTATTTTAGTTTGAA
CGTAGTTGTCTAAGAAAACAGCTATTTTTTTTAGAATCTTCCTTACAATC
TAGTTTTTCTATTTAGTATAAAAAGTAGATTGCTGACGTGTGGAAAGAAA
TTTTGGCATGACTGATCCTTTTGTTTCGATAGTAACATCAAAGCAGGAAT
TAATTTTTCTTCTCGATTCTTTCTTTCCTTTTTCTTTCTTATCAGTTCAC
GCTTTCTCTCACTATTTTCAAAGCGTGGTTAGCTCAAGCGGTTAGATCGT
CTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATAACAACC
GTATTTTATAAGCATTGAATACTGAAATTCAAATAACGACCACGCAAGAA
AGATAAGCAAACGATTGGATCAAGTGCCAAACATTTTGACCCGGAATTCA
ATTATTATTCTGCCTTTAAAGTATAAAACGAGAAGTTCAATGATTCTGAA
AGAAGTTATTTGACGATTCTGAAAGAAGTTATTTGACGATTCTCATACAA
AGAATCGCTCGCTCACTCGCTGGCTGAAAGTGAAAGTGAAAGTGAAACTG
TCAGTCAGCAAACGCAGGCGCAAACGCCTTGTGGCAAAAAAAAGANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCTTAGACAGAGAGCGGAGGTAATATATGCTAGTTA
CTTGTTTGATTGACCTTCATTATAAAAGAAAGAGAATTAAAAAAAGAAAA
TTGAAGAATTGAAAAATTGAACACCCATCGGAATCGAACTCGGAGCCCTG
TGCATATGAGACAGACGATCTAACNAAAATTGGACATCCATTGGAGTCGG
ACTCGGAACCCCGAGCATACGAGACATACGATCTAACCGCTTGAGCTAAC
CACGCTTTGAGAGTGGCGAGGGAAAGCGTGAACTTATAAGAAAGAAAAAG
GAAAGAAAGAAACGAGAAGAAAATTAATACCGCTTTGATGTTATTATCGA
AACAAAAGGATCAGTCATACCAAAATTCCTTTCCACACGTCAGCAATCTT
TTTTTTATAAATATAAAAACTAGATTGTAAGGAAGATTCTAAAAAAAAAA
TAGCTGTTTTCTTAGACGACTACGTTTTTGTATCTTTGAAAGACCCCATC
AGATTTAGGCAGGGCTGTCGAATTTAGGACCACTCACGGTATATACTGTC
AAGAGCAGCCGCCGGCAGAATCTTTTGAAATATCTTTTCAGTCACAATAT
AAGGCTGAAGGCCTTCTTAGGGGCATCTGTACCCTGAGACCTAACTTAGG
ATTTGTAGGGGCACCGGTAGGCAGACCTGCCAACTTGACAGGTTCATTTT
GCGTGAGATAAAAATTTCAAAGCAAAGTCCGAATTCATAACCCAATTTTT
CCGGTTTTCCGATATCGGAAAATGGGAAATTTTTCCAAAAAATCTTTGAA
ACTTTGTCCCGAAAGTTGGAAAATCGGGGACATTTTTTCAAAAATTGGAA
AATCAGGGAAAATATTTTCGGAATATCGGGGAAATTTTTTTCAAAAAATC
GGAAAAGCGAGGAAATTCTTCTCTAAATTCAAAAATGCGTGAGAAATCAA
ACTTTTCAAAAATTGAGCGAGACAGTCTGGAAATGCGTGAGTCTCACTCT
CAATGCGTTAGAGTTGGCACCTCTGGGTAGGGTTGGGAGCTTTCTTAATA
AAGGTCTGTAAATTACACGTTATAAGTATTTGTGAATGACGGTTTTCTGT
CGTGTCTCGTTGGCGCAAGCGGCTAGGCATTGGGTTTGTAAACCAAGGTT
GCTTGCATTTGGTGGTTCGAGCCGGGCTCAGAGACCTATTTCACCGCTAC
GGGAAAATTTTAGAAAAATACTTATAAAACAGTTAGAAACACTTGAGAAA
GTCAGAAAATCAGGATAGAAGATAGAAAAGTAGAAAATAGGGAGAAAATA
AGAGGGGATGCATCCTGGTGGATGATATCGTTTGCCAACCAGACCAGATA
TGCAACAGTCCCATGTTTCGACCAATAGTCCCAAGTTAGAGCAGTTGACG
GTAAATTTTATGGATAAATCTAGGAGAGACTTTCCTCAAAACACCCAGGT
AAAATTCAGGGGTCGCCTTAAAGACATCTGTTCTTAAAATCAATACAATT
TTCCAGCGGACAATTTGTTCAAAAATTCCAGGAGCTAAATTGTGAAAAAC
ACAACCAGATGCCAGATTTTTTTTCCAGGGAGCTTCATAATTTTCTTAAA
AGGTCTCATTTTCTAGGCAAATGTGCTTTCTTAGAGAATAGCGCTATTAT
ATTTTTCCAGGAGCATAATATTTCTAGAGAACAGATATACATTTTTCAGG
AGTCCCATTTTCCCAGGACAGATGATATATATACCGTGAGATTGGTGGTG
TGGCTAAGTGGAGGCTAACATGCATAGCCCTCAAATGAAAGACCTGACTG
GTCATTAAAATACAACTATGCAGCTCCGCTCGCAGCTCTACTCTACTATT
TTTGTTTTGATTTAACTTTGTATTTTAATGACCAGCCAGGTTGTTCATTT
GAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCGATCTCACGG
TAATCCAGGAGAGCCCAGGATACAGAACAGATAGTTTTTTTCCAGGAGAA
AGGGACCTCAAGAACAGATATTTCATACTTCTTAGCCGGTGGCTGCTCTT
GTACTGTGCTAAAAACTCTACAGTCAGCTTGGTAATAAATATCGTGTGTT
TTGCTTTTGATACAAATAAGCTCTCACATTCTTTTTACGCCCCCTGACAG
CTGACAATTAGGCTAGGATAGACTTACCTCTTTTCTCTTTCTATCCCAAC
AATAAAATGCTTACATTGTTGACACATAATACACATTGAAAGAAGTACCG
TCAACTGCTCTAACTTGGGATGATTGGTCGAAACATGGGACTGTTAGATA
TCTGGCCTGTATTTTTAGTTACTGTTAAATCTCTTTGACAACAAATTTGT
TTTGATATAAACTCTTCCAAGTTTATCAATCATACTTTCTGTCATAGCAT
GTCACGATAACTTTCACTGATAGCGCGCCTTTTTTAACTTTTTTGTTTTC
CTTCAAAATGATGGGAGGACGCCGATTGGAGAATCAGAGAAGACGCCGCC
TATTGGGATTAACAAGTAACTTGCCGCCCGAGTGACGTCAAACGCTCCAT
CGTTTTGCCACTAATTTGGTCTTCTTTGTTCCAGACATTCGCCTGTGTTC
CACTCTATGGATTTTTTTCATATTTCGATTTAAAAGCCTACTCGGTGCGA
AAGTGAAATCGTGTATTTTTTAATACGCCGTTCATTAACTCAAATCAAAT
GACTTTGGAGGTTCGGTGAAATGGTGGTCGAATTGCCGTTCCATGTTTTG
TCAGATAGTCCCAAGTTAGAGCAGTTGACGGTATTCCCCATGCAATTTTT
ATATTGAAATCTGCAATTAAAGCAAAAGTGGTCTCTTCTTCTCAGTTGCT
TCCGTAATTCGCTCCATCGGAAAGTCTTTCTAAAATTTCAACCAATGAGA
TTGCCATGTATGATGACGGTTAATGACTAGCCCTACTTTTTGGCGCTAAT
GGCTTTTCCACACCTTGGATAACGAGTAGTCATTTAACTTTATTTCTTTC
AATCGTTGATTCTAAAGGATGAATTTTTTCTTATCTTTAGTTCTCAAACA
AAAGCGGGAATTTGATTGGAATGTTATTTTTCAAAGAATCCTTTGGGGCC
ATCCATATAGTACGTACGCAGTGAAGGGGGGAGAGGGGGGTTTAGCAAAA
GCGTACATCTATTGTTTAAATGAAGTCATTTCTATTGTTCTCTGCGTACA
AGGGGGGAGGGGGTGTCAAATATTTGGAAAATCTTTGCGTGCGTACTATA
TGGACGGCCCCTTTCCGATTGGATGAAAGCGCTTTACCTTCATTTGATTG
GATACTTCTTTTTAAATAATCCCAGGGGGTGAATTTTTAGTTTTTCTTCT
GTATTTTGTTGATGTTCGCCAATCCGGGGAGTCTTCATATATATATACCA
CAGGAAAACATATTGGTATATATTGGTTTTTATTTGTTGATTTCTTGCGT
CATTGATGACTTGCGCAAAATTCCTTGAAATGGAAACACACAGATTTTAT
TAAGCTGACAGTAGCTAGATGCTAAGGGGTTCACAATTTTTCTCAGCCTA
GTCGACATGACACAAATAATATGGATAATCACACACACAACACATTGACA
AAAATAATTTAGGCAAACCAAATATATTTCAAAGTTTTCTAGATCAAAAG
TTATGGGCGGTTTTGGCTGAAAAAAGTGTTGGGCATGTCCCACTAAGTTT
GCAAAGGGGGAAAAATCGATTTTATTGCCTAAAATTGAGTGGCCAACATG
ACCTGAACATGACTCGAAAATGTTTGGAGTATGTTTGGGCCATAATGTGG
GTCATAGTCAAAATTGTACCGTGAAATCGGGTAACTTGCATCAATGGTGG
GAAACTTGCATAGCCATCAAATGCCTGACCAATCAAAGCAGTAAAATTTC
AAAACACATCTTTTCTGCTTGCAGCTCTACTCTACATTTTTAGAATCTCA
TATTTGCCGCGCGAGTATTGGCATGTTACTCGCAGACAGAATTGAGGGTA
AATAAAACAGCATGGTTGGATAATAAAAAATCATGCGAGAACATAAATTT
TAAGATGGCGAGAATTCAGATGTTTCTTGATGACTGTTTGCCGTGTAATC
TCAAATTTAATAATGATACTAGACATAATTATATGTGACATCACTTATGA
TTAGGAGATATACATTTTACAACCTGCTGATTTTGTAAATCAGGTTTGTT
TTGATTTTACTATTCTCTTTTAATGAACAGCTAAGTCATTCATTTGAGGA
CTATGTATGTTAGCCTCCACTGAAGCAAGTAAGCCGATCCCACGGTACAT
TGTAGGTTTTGATAGTCCTTTAGGTCAGGGAGCACAATGGTCTATTGAAT
AATTGGTGTCACTTTCATAAGTGAGGGGTAACTATTGTCACATGCACAGA
CCACAACATTTTCTGGTCCTCAATTTATAAAACTCAAAAGTCATGACTTA
TTCAAATTCTAACCAAATTGACAAATTTCAGACTAGAGCAGTCTGCTGTT
TGGAAGTGATGAAAGTTACTCCCAGGCTTATAAAAGTAACCCTTAATTGG
CGACAACTACTACAGCGTAGCATAATTTTTTTAATGATAATGTCATCTAA
GCCAGACTCTTCCACTCGATACAATTGATAACTTTTTCCAATCGATGACT
TATTGACAACCAATCAACTAATTGGATATTGATTGATGTTGATAATTGAT
AGGTAATCCAGCGTACTCTAAAATATTGAGTACCGATTGATCATCGATTG
TTTTTTCATCAATTGGCTATTGACTGTGGTCAATTAATCTTCTTAGAGTC
AATCGATGAATAATCAATCTCCTCCCTTAAAATCCTGATTATTGATTGTC
TATAGATTTTCAGAACTACTCGATATCCGATACATATAGACTGATTATCG
ATTGGTCATCTATTTGAAAAAGTTAACGATTGGATTGAGTGGGAGAGTCT
GCTCTAATAAATAGACTTTTTGCTAATCAGGATGTCATGTTGAATAATTA
AAAACTCCAACATCAAAATAAAGTGGGAAGTTAAGTTAATGTGCACTTAA
AATAATTATGTAATAATGTGTCGTGGTTTTAATCCTGGAGTTTTTATGGT
AACTTTGTGTAATGCCGACATACCTTGTCTAATTCCGTCATAGCAGCTAT
CTTGTCTAAAAAGTACAAAGTAGTTAGAGTGATTCTTTTAAACAGCTTAC
TCAGAAGGTTATTTATAGACATTTAAAAGACGAAGTATGTTGGCATTACA
CAAAGTTACAGTGATTTTTCAACATGACCTGATTAGCAAAAGGTTTATTG
ATTTGTTGCTGCAAAGAAACAAAATAATATTCCATTCAGTCAGGTCTAAC
TGTGGCATATTTAGACCACAGAGTATACTACAACCTCTTATTACACTAAG
ATATTTGACTCGGATTACATGGTAGTATACTTGCTAAGTGATGGATGTTG
TATGTGTGCTAAGTGTGGTGATTTTCTCAGGTAACAAAAACTTTTTTTGG
AGTTGATTTAGGTGTCTTTTTTATTTAGAATTACCTCTAATCAATAATAT
TTAAGATATTTGGGATATAAATATTTCCAGCAAAGGGTAGCTGCTAAAAA
TCACAATTAAAATGGACTAGCCTGATATGTGTTTTGATTTTCAGGATGCT
GCTGAGGCTACTCCAACTCTTAAACTACTTGAAGTACGTAATCCTTTTAC
ACCAATACCAATAACAGTAACACCTAGAATTGAAAACCCCTTTACAGTTA
CAACGCATACTACAACGGGAAAGCACACAACAACGACCACCAAGCCTCCA
ACAACAACAACAACAACAACAACCACAACAACAACCACCCAGCCCCAGAC
AACTGTTATAATCACCTATTCACCACACGGTAATGATGTATCATTGAATT
GAACAATTCTTTGCTATCATCTTTTTTTGTCATCTATACAGTTTGTCTGA
AAAAAGTAGAACAGAGTTGTTTTCTCAAGCTTTGATACTGTTTCATTTTT
AAAACTTAATTTTAGAGAGGAGCTGTACGCATTTGTTTATGAGTGTGTAT
GAGAATGATTTTTGTAGATATGGATTTTGACTGTTTTGAATGTTTTAACG
TCATTTCTTTTAGAGCTGGAGATGATATTTTTAGTCTGAAATATGCCGGG
TGGTAAAAAAAAACTTAGGATGTTATCCTAAGTATTTTAAATGGCTTTAA
AGCTATCAAAGTGATCTGTAAGGTTGATTTATTAAAATTAGGGCTGGTCT
AACTTAAATTTTGATGTGTTACTTTTTACATTTGGACAATTGATTTATAG
CCTTATAAATATATTTTTTTCATAAACAAAAACTGAAATTGTGTTTAAGA
TATTTCTATTTCAGCTCCATTTTATCTCTTTCTCATCATTCATGTTGATC
CATTTTGCTCAAAGGCCTTACCAAACATCCGAAGTTTATTTTTGGACCAC
GCGGTATAGTCAAAATAAAATGGTTTAAGTTGTCGGCTCAATGTTATCTG
ATAAAATCTTTTGATCATATCCCCAGTTTTTAAAATATATTAATCAAAAA
CCTTTAAATCCAATTTGACTTCCTGTCTTACTCACTAGGCTGCACTAACA
AATAACTATTTACACGCAAAATCAAAATTTATACAATACAAGGAATATCT
AAATAGAAACAGTATTAGTAAAGTAAAAATATTTGGCATTAGGTGAGACT
TATATTGAAATAACTATTTATAACTTTTATCTAACAGATTGCATTGAAAA
TAGTCCATATCTGGTCAATGGAACGGGTTTATCTGCCACTGGATCGCAAA
CAGTATTGATAGGTGTCGGGAGCAATACGTTGCCTGAATGCTCAATTTTA
TGTAAAAATCTGTCCATGTCCGCAAATAACTCACGAATTAATGCAGCTAT
ACTCATCAAGGAAAATGGAAGTTGTTTATGTCAGCAGAATGTCATTATTG
TTGATTCCAATACAATATTATACAGTACATGTATCTTTAAAGAAGCAGAA
GACACAGGGTTGTTCTATGAAAGTAAGTTAGTTTTTCACGTGCCACCATT
AAA

Coding sequence (CDS) from alignment at scaffold_44:246026..262628-

>TCONS_00065517 ID=TCONS_00065517|Name=TCONS_00065517|organism=Clytia hemisphaerica|type=CDS|length=2007bp|location=Sequence derived from alignment at scaffold_44:246026..262628- (Clytia hemisphaerica)
ATTGCATTGAAAATAGTCCATATCTGGTCAATGGAACGGGTTTATCTGCC
ACTGGATCGCAAACAGTATTGATAGGTGTCGGGAGCAATACGTTGCCTGA
ATGCTCAATTTTATGTAAAAATCTGTCCATGTCCGCAAATAACTCACGAA
TTAATGCAGCTATACTCATCAAGGAAAATGGAAGTTGTTTATGTCAGCAG
AATGTCATTATTGTTGATTCCAATACAATATTATACAGTACATGTATCTT
TAAAGAAGCAGAAGACACAGGGTTGTTCTATGAAAGTAAGTTAGTTTTTC
ACGTGCCACCATTAGATGCTGCTGAGGCTACTCCAACTCTTAAACTACTT
GAAGTACGTAATCCTTTTACACCAATACCAATAACAGTAACACCTAGAAT
TGAAAACCCCTTTACAGTTACAACGCATACTACAACGGGAAAGCACACAA
CAACGACCACCAAGCCTCCAACAACAACAACAACAACAACAACCACAACA
ACAACCACCCAGCCCCAGACAACTGTTATAATCACCTATTCACCACACGA
TGTCTTCTCCGTCAAGGATAATGATTTTCTTTGTTAAGAATTTAGATGTT
TTTCTCATTCTTTTTGGTGTTGCTGGGTTAACTGCAACAATCATAACATA
TACAAATAGTTTAAAAAAGATTGCATTGAAAATAGTCCATATCTGGTCAA
TGGAACGGGTTTATCTGCCACTGGATCGCAAACAGTATTGATAGGTGTCG
GGAGCAATACGTTGCCTGAATGCTCAATTTTATGTAAAAATCTGTCCATG
TCCGCAAATAACTCACGAATTAATGCAGCTATACTCATCAAGGAAAATGG
AAGTTGTTTATGTCAGCAGAATGTCATTATTGTTGATTCCAATACAATAT
TATACAGTACATGTATCTTTAAAGAAGCAGAAGACACAGGGTTGTTCTAT
GAAAGTAAGTTAGTTTTTCACGTGCCACCATTAGATGCTGCTGAGGCTAC
TCCAACTCTTAAACTACTTGAAGTACGTAATCCTTTTACACCAATACCAA
TAACAGTAACACCTAGAATTGAAAACCCCTTTACAGTTACAACGCATACT
ACAACGGGAAAGCACACAACAACGACCACCAAGCCTCCAACAACAACAAC
AACAACAACAACCACAACAACAACCACCCAGCCCCAGACAACTGTTATAA
TCACCTATTCACCACACGATGTCTTCTCCGTCAAGGATAATGATTTTCTT
TGTTAAGAATTTAGATGTTTTTCTCATTCTTTTTGGTGTTGCTGGGTTAA
CTGCAACAATCATAACATATACAAATAGTTTAAAAAAGATTGCATTGAAA
ATAGTCCATATCTGGTCAATGGAACGGGTTTATCTGCCACTGGATCGCAA
ACAGTATTGATAGGTGTCGGGAGCAATACGTTGCCTGAATGCTCAATTTT
ATGTAAAAATCTGTCCATGTCCGCAAATAACTCACGAATTAATGCAGCTA
TACTCATCAAGGAAAATGGAAGTTGTTTATGTCAGCAGAATGTCATTATT
GTTGATTCCAATACAATATTATACAGTACATGTATCTTTAAAGAAGCAGA
AGACACAGGGTTGTTCTATGAAAGTAAGTTAGTTTTTCACGTGCCACCAT
TAGATGCTGCTGAGGCTACTCCAACTCTTAAACTACTTGAAGTACGTAAT
CCTTTTACACCAATACCAATAACAGTAACACCTAGAATTGAAAACCCCTT
TACAGTTACAACGCATACTACAACGGGAAAGCACACAACAACGACCACCA
AGCCTCCAACAACAACAACAACAACAACAACCACAACAACAACCACCCAG
CCCCAGACAACTGTTATAATCACCTATTCACCACACGATGTCTTCTCCGT
CAAGGATAATGATTTTCTTTGTTAAGAATTTAGATGTTTTTCTCATTCTT
TTTGGTGTTGCTGGGTTAACTGCAACAATCATAACATATACAAATAGTTT
AAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041057XLOC_041057Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065517-proteinTCONS_00065517-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065517-exon-scaffold_44-1575043694:262441..262628TCONS_00065517-exon-scaffold_44-1575043694:262441..262628Clytia hemisphaericaexon
TCONS_00065517-exon-scaffold_44-1575043694:247200..247434TCONS_00065517-exon-scaffold_44-1575043694:247200..247434Clytia hemisphaericaexon
TCONS_00065517-exon-scaffold_44-1575043694:246026..246341TCONS_00065517-exon-scaffold_44-1575043694:246026..246341Clytia hemisphaericaexon
TCONS_00065517-exon-scaffold_44-1510915933:262441..262628TCONS_00065517-exon-scaffold_44-1510915933:262441..262628Clytia hemisphaericaexon
TCONS_00065517-exon-scaffold_44-1510915933:247200..247434TCONS_00065517-exon-scaffold_44-1510915933:247200..247434Clytia hemisphaericaexon
TCONS_00065517-exon-scaffold_44-1510915933:246026..246341TCONS_00065517-exon-scaffold_44-1510915933:246026..246341Clytia hemisphaericaexon
TCONS_00065517-exon-scaffold_44-1491911889:262441..262628TCONS_00065517-exon-scaffold_44-1491911889:262441..262628Clytia hemisphaericaexon
TCONS_00065517-exon-scaffold_44-1491911889:247200..247434TCONS_00065517-exon-scaffold_44-1491911889:247200..247434Clytia hemisphaericaexon
TCONS_00065517-exon-scaffold_44-1491911889:246026..246341TCONS_00065517-exon-scaffold_44-1491911889:246026..246341Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_44supercontigscaffold_44:246026..262628 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.2607	21.0292	7.87645	8.47643	2.81434	4.76366	4.02459	2.93053	3.51722	2.17833	3.87628	4.79756	3.46987	3.84373	6.11965	4.451	4.43274	2.9439	1.47897	2.99133	4.98348	3.83247	7.1785	8.3321	11.2032	10.9986	2.38646	2.25302	5.79089	5.11325
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065517 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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