TCONS_00065504 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065504
Unique NameTCONS_00065504
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length605

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065504 ID=TCONS_00065504|Name=TCONS_00065504|organism=Clytia hemisphaerica|type=transcript|length=605bp
CGACTTAGAAATCGAAAGTGTCCTTGTaaaaaattctggaaaaatCAGAA
GGAATTCAAACGAAGAACGACACGACAAACACTCAAACCAGGCCAGGACT
AGAACTGACTTTAGGAAGGAAATCTTAAAATGTTTGGAAGATCAATGTTT
GGGGATGATCCCTTTTTCAGTTCTTCATCCTATATGTTTGAAGAGTTTAA
TCGTATGGATCAAATGATGTCATCTTTTGGGATGCCAGGAGGCAGGATGG
GACAGCCACCACACCACTCTGCTATAGGTGACTCTTCTAATAGACAGCAA
AGAAATCACCAAAGACGTCCACACCAACAACAACAccaccaacaacaaca
acaccagAACGAGATGTTGTCACCTATTGGTAGAGGAGGTATGTTTGGTG
GTGGAAGTGTGTTCCAAGAGATGAATCGTATGATGGCTGACATGGAGAGA
GGCTCTTCGTCATCCACTGGGCAATTTTATTCGTCATCAAAAGTCATGTC
CTACTCAAGAGGTGGTGAAGGAGACCACCCAAAATATTACGAAGCATCCT
CTCAAATTACTCAAGGGCCAGATGGTGTAAGTATAAGAATCACACTTTAC
CGAAC
Run BLAST on NCBI

protein sequence of TCONS_00065504-protein

>TCONS_00065504-protein ID=TCONS_00065504-protein|Name=TCONS_00065504-protein|organism=Clytia hemisphaerica|type=polypeptide|length=158bp
MFGRSMFGDDPFFSSSSYMFEEFNRMDQMMSSFGMPGGRMGQPPHHSAIG
DSSNRQQRNHQRRPHQQQHHQQQQHQNEMLSPIGRGGMFGGGSVFQEMNR
MMADMERGSSSSTGQFYSSSKVMSYSRGGEGDHPKYYEASSQITQGPDGV
SIRITLYR
Run BLAST on NCBI

transcript from alignment at scaffold_44:176834..187417-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065504 ID=TCONS_00065504|Name=TCONS_00065504|organism=Clytia hemisphaerica|type=transcript|length=10584bp|location=Sequence derived from alignment at scaffold_44:176834..187417- (Clytia hemisphaerica)
CGACTTAGAAATCGAAAGTGTCCTTGTAAAAAATTCTGGAAAAATCAGAA
GGAATTCAAACGAAGAACGACACGACAAACACTCAAACCAGGCCAGGACT
AGAACTGACTTTAGGAAGGAAATCTTAAAATGTTTGGAAGATCAATGTTT
GGGGATGATCCCTTTTTCAGGTATATTATTTTATGTACAATGTATAGCAA
TGTGCCCTCCCGGTTATTACCATAATGGCTTTATGGCAACTCCTGAACTT
GGGCACAGGATGTACGGTTGTTATTTTATGTATACATTTTTTATTTCTTT
CCCACTGCTACTACTACCGTAAGTTGGTCTAATATCGACATCCCTCCTCA
TCTAAATTCCGACACCCTTCTTTAGAGACAGGAATAATATGAAAGCTTGA
ATCACTGATTGAAAAAGGGTTATTCCTCTGTTCTAGTTCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTCAAAACGAGGCTAAAAACTCTGGGAC
AGGTTGGAGACTTCAAAAATGGTCCGATTTAGCTGAAATTTTGCACACTT
GTTCCTTGGGTGAATTTCTGGGAGCTTTTTTTCATATTTTCAAAATGTTG
ACTCTTAGGGGTGTGGTAACAAGTTTTAGCCTCAAAACAAGGCTAAAAAC
TTTGGGGCAGGCTTGAGACTTCAAAAATATTCCAATTCAGATGAAATTTT
GCACACTTGTTCCTTGGGTGAATATCTGGGGTATTTTTCATTTTTAAAAA
TTTTGATTCAATAGGGGCGTGGTCATGAGTTTACCCTCAAAACAAGGCTG
AAAACTTTAAGGCAAGCTCGAGACTTCAAAAATGGTCCGATTTTAGCTGA
GTAACAGCAAAATTCTTTGAAACTTCTCCATTTCCATTTTTTTACACTGG
CACAATAAAAAAATCTTTCATGAGATTCGTAAAGTGCACTATGCAATGGT
TCAATTGCAATTCTACCGATTTTGTCTTTCAAATAACTTTTTTTATTGCA
CTAGACAGGTAACATTTTTTTTGGGCCGGCCTAATAACTAGATTTTCCTT
ACTTACTATGCTTTAGAAACGTCTGAAATTAGGTTGTGGTGTGTCATTCA
GGTAGTTAGATAATTCTTTTTACTTATATAGGTTCATAAGGGAATAACTG
ATAGTTTTTGGATGGGTGTAGCTCAAGAGAGAGAATCCAATAAAACATGC
GTACCCTGCTTCCCTCACTCAGGAAAGAACAATATAAAATGTAAAATATT
TTTTGATATTCATTCTTTTTTGACAGGTTCAACCCCAACAAAGCTGAAAT
GCACAAAGAATTCAAAATTGACAATTCACTCAGATTACACCGCAAGTCAA
GTAAGTACTGAATGTCTGTTTAACTATTCAGATGTTGAAAGATGCCTGTT
AAACAGATGGCCGAACTGTAAAAATCACCAATATTTGGTCTGTATAGCTC
AGTACATTGAAGGCTGTGAACAAGAATTTGTAGCCTTCGTAAATACTTAA
AAAATTCATTGCTTGAGATTTAAATGGAGTTTGTGGTAACAATTCAGTAA
TGAGAAATTCTAATATTTTTTTAGACATGGCTCTTCCAACCATAGTACCA
ACTGAATCAAAATTCGAAAGCTGATGAAAATTCTTAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATAGGGAAAAATAT
TTGTAATTTTGAAATTAAAAACTATTAAAATAAATATTTTCATATCAAAA
TGTAAGATAAAAATATTAAGTTGAAATATTAAAACTATCCATGTCCATGA
TTCCACGATGGTGATAAGGCCAGCAGTAAATAAATAACATGGCACAAAAA
TTGTTCAAACAGAAGACAAAGCATGGGGACACAAGACACAAAGAGTAAAA
TCGGAAGAGACAAAAAGGACTAGCTCAGGATAGAAAAAGTAAAAATCAAA
AAGAAATAAAAAAAAAATTCCACAAGTTAAAATTCGTATTGGAAATGCTA
AGGCTAAATTTATCAGGGTCTTCTTTATTGACGATATGGGTTGGTAAGGC
ATTCCACAACCTAATTGTTGAAGGGGCATAGCTGTATTCATACGACCGGA
TTCGTGCAATTATTGGTATAATTTTTAAGTTAGCGGTACGAGCACGACGT
ACAAGAGAAGATAAACAATCAATTCGACCGTGTAGAATCTTACAGTTAGG
AACATTTGGCGAGTTCCCGTACGCGACCGCAATCAAAAAAATCATAACAT
CACTCATTAAAAAGTGGCGTTCGTGTCCTTTCGCACTTTTTTTAGCCTAG
AGGATGTAGCAAACATAGTAAGTATAAGCACACTGTGCTTTAATAATTGG
CTGAATTATTTTTTTGCGTTGGAAAAACTTTTTCAAACTTTCAGCGATGA
TTGTCCAAACTGTTACAATGAAAATTATCCAGCGCATTTTTTATCTTCTT
ACCTTCTTCATTTTCAATGAAGCACTCAAAGTTTACTGAAGGTAAGCACA
TAAGATATTCTTATAATTAACGATATTCATTGAAACACGCTTCGTTGTGC
GCTGCGGTGGAGTGCATGACGTAACTCGCGCGGCAACTAATTCGCCTTCT
GTTGGAAGATCATATTGGGCGTTTTGGCATTACCACCCTCGAAGCAACGG
GCGCCTTTGTCTTTCCGCAACTCTTTCCACCATTTTAGATGGCCTTAACA
AAAGATCCAAAAGGGCGCCATAATCTTGGAAGATAATTTGTTTTGGTCTC
CGGCTTTGGGATGTAGCAATGTTTTTGGTTGTTTTCGATGGAAAATAGTA
AGAAACTTAAGTTTACAAGTGTCATTTAGTTTTTGCTGGCTTATTGAATG
GCAGGATCCTGGATGGTTTCCCTAACTGTCTTATGCATGTAGTTCAGTTT
AGTTTCAAGCCGTCTTTGCTGGAGGGTCTTAAGGTTAAGATTACGAATCA
TGGTGGTTGGACTACTGGAATATTNGTTGCTTTTTCAAAAACAATGGCAC
GGCAATTTTTTGATCGGACAAAATAAAACGATCAATACCGTGGTGATTGG
ATAACAAAATATTTTTTGTGTCTGGGATTGTCCAAAATAAAACAATCTCA
ATATTTACCAGGGGGTGAATACTATTTTTTCATGCTCACCAATCTAGGGA
GTCTTCATTTATATATCATAGGAAAGCTCATTAAACCTACTAAGTTAATT
TTGAGTTTGGCTAATCCCACACAAATTTTACCAAACTGCCAGAATAGACC
TTTTTTCCATACCCATATATCTAAAAAAAATACAGGAACGAAAAAGTTAG
TTGGATTTAGTTAAGAAATATGCAAAACATATGCAAGTTTACACAAAGAT
TATAAAGCCAAGAAAACTGGAGTTTTTAATTATTCAACATAACATCCTGA
CTAGCAAAAGGTCTNCCTTGCGTTGGACCATTTCTAATTGGTTGATGTTT
GCTGAAGTATGAGGATCCCAGACAACTGATGCGTATTCAAGAATCGGTCT
CACATAGTTACGATAAGCTTGGAGCTTGATTACTTGGTTACATGTATGCA
GGTTACGCTGGAGGAAGCATCTGATTTGTTTGGCTTTTTTCAAGGTATAG
TTGACATGGGTATTCCAAGATAACTTTTTGTGTATAAATACGCCGAGGTA
TTTTGCTGAGTCAACAAGCTCAAGGATCTGGTTATGCCTGGTTATGCATG
GAATAGTCAGATAGGATNAATTGTGAATGTCTCGTTTGAACTTATTAGAA
AGTCTAGTGGTTGGTAGCGCTCCACTTGTTTGCAGGATATGTGAATTAGC
AACTCACATTAGTAAAAAAATGGTTAAAGAAGTTCACGCGTATTGATATA
AATTTGTGTGTTTTTTGTTTGAAGTCCTCATTTCCTTCTTCGTTTTCTTT
CGTACGGCCACTCGGATACGGCACGCCGAACCGGGCTCTGGGCCAACTTT
TNGCATTTGTTTGGATTGAATTTGATGGACCAATGCCTTTCCCACTCAAT
CAGATTATTTAGATCATGTTGAAGTTGATAAGTGTCATTGACTGGTTCAA
TTTTTCTGTATAATAGAGCATCATCCGCAAAAAGACGTATTTGAGAGTTC
ACACACAATGGTAGATCGTTTATGTATACTAGAAATAGTAGTGGTCCCAA
TACTGTCCCTTGGGGAACACCAGATAATACCGTGGCTTTGTCTGAGNGCA
ACACTTTCTAACCTTTCGTTAGATGACGGGTGACTCTAGAGTAGCAGGGC
AAGCTTACTCATGGCCACACCTGATGCCAGACTTTGGTCTTCATCTATCC
TCTTTCCATTTATTTCTCAACTTTCTTTAAATTCACTTATCGGTTTTCTC
TCCGCTAAATTTGTAGATTTATATTGATTGTTTGTCTATTGTAAGATTGT
TTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGTTAAGTTGGTG
AAAATGATTTCTCGCTCAGTTTGAATGTTTTTGATTTTTAGTTTGACACG
CGTTTTCTGAATTTTAATTAGCTTTTTCAGATATAAAAGGTAGAATGTTT
TCAATCAAATCTCAAGTTTGACTAGCAAAAGGTCTATAAAAGGTAGAATT
TCATAATTCAAAAAGAAATACTTATAAAACAACTAAAGCCTTTTTAGAAT
CTTTTCTTAAAGACATAGTAGCATATTCTGTTTTGACTCTGTTAAGAAAT
TCCACGAAATTCCATTGCCGATTGAATACACACACATAATTATGAAAAGG
TGTCACAATTAGATGAAAAAATATTAGATTTTTTCCAGTTAATGCTTATT
ATATTTTTCCTCCTTTTTACAGTTCTTCATCCTATATGTTTGAAGAGTTT
AATCGTATGGATCAAATGATGTCATCTTTTGGGATGCCAGGAGGCAGGAT
GGGACAGCCACCACACCACTCTGCTATAGGTGACTCTTCTAATAGACAGC
AAAGGTAATGCAATTGTAATGTACAAACTAAAAAAATATTGAATATAAAA
ATTGGGCCAGAATATATGAGACCAAGCTAAAGAAAGTAGGTCTTAGTAAT
TTTGCATTTTTTCCCATTTCTTTTTCCCAAATACCTAAGCTCCAAGTACT
TTAGGATATTTATTTGATGTCAAGATGTTAAAAACTGTACGTAAATATTT
GGTGGGCCACTGTCACCTGGTATCTATTTTCCAAGAAAGGTGTTATTTGA
AGCTAACCAGCTTATAATTTATAAAAGTAAGACGGAGGGTACGAAAACTT
TCTACCATAGAAATCACCAAAGACGTCCACACCAACAACAACACCACCAA
CAACAACAACACCAGAACGAGATGTTGTCACCTATTGGTAGAGGAGGTAT
GTTTGGTGGTGGAAGTGTGTTCCAAGAGATGAATCGTATGATGGTATGTA
TAAATTCGCAAATATTTCAGTTTCAGCCGTGTTTGAAGAATTAGCTGGAA
TAATACAATTTGTACTTCTCCCTATACCGTGGATTACAAGTTTACCTACC
CCCCCCCCTCACCACCACCAACATTAGCTTCGGTTGACCCTAAGAAGTTC
CAAGCTACCCGGGAAAGCACCTTTTATCTTAACTAAGCTTGGAAGGCCCT
GAACCCTGGTTTGTTCCAACAGATGGAATTTGTTCATTCTTCTGCTTATT
TCCATTTTTCGCAGGCTGACATGGAGAGAGGCTCTTCGTCATCCACTGGG
CAATTTTATTCGTCATCAAAAGTCATGTCCTACTCAAGAGGTGGTGAAGG
AGACCACCCAAAATATTACGAAGCATCCTCTCAAATTACTCAAGGGCCAG
ATGGTGTAAGTATAAGAATCACACTTTACCGAAC

Coding sequence (CDS) from alignment at scaffold_44:176834..187417-

>TCONS_00065504 ID=TCONS_00065504|Name=TCONS_00065504|organism=Clytia hemisphaerica|type=CDS|length=1896bp|location=Sequence derived from alignment at scaffold_44:176834..187417- (Clytia hemisphaerica)
GCTGACATGGAGAGAGGCTCTTCGTCATCCACTGGGCAATTTTATTCGTC
ATCAAAAGTCATGTCCTACTCAAGAGGTGGTGAAGGAGACCACCCAAAAT
ATTACGAAGCATCCTCTCAAATTACTCAAGGGCCAGATGGTGTAAGTATA
AGAATCACACTTTACCGAAAATCACCAAAGACGTCCACACCAACAACAAC
ACCACCAACAACAACAACACCAGAACGAGATGTTGTCACCTATTGGTAGA
GGAGGTATGTTTGGTGGTGGAAGTGTGTTCCAAGAGATGAATCGTATGAT
GTTCTTCATCCTATATGTTTGAAGAGTTTAATCGTATGGATCAAATGATG
TCATCTTTTGGGATGCCAGGAGGCAGGATGGGACAGCCACCACACCACTC
TGCTATAGGTGACTCTTCTAATAGACAGCAAAGATGTTTGGAAGATCAAT
GTTTGGGGATGATCCCTTTTTCAGGCTGACATGGAGAGAGGCTCTTCGTC
ATCCACTGGGCAATTTTATTCGTCATCAAAAGTCATGTCCTACTCAAGAG
GTGGTGAAGGAGACCACCCAAAATATTACGAAGCATCCTCTCAAATTACT
CAAGGGCCAGATGGTGTAAGTATAAGAATCACACTTTACCGAAAATCACC
AAAGACGTCCACACCAACAACAACACCACCAACAACAACAACACCAGAAC
GAGATGTTGTCACCTATTGGTAGAGGAGGTATGTTTGGTGGTGGAAGTGT
GTTCCAAGAGATGAATCGTATGATGTTCTTCATCCTATATGTTTGAAGAG
TTTAATCGTATGGATCAAATGATGTCATCTTTTGGGATGCCAGGAGGCAG
GATGGGACAGCCACCACACCACTCTGCTATAGGTGACTCTTCTAATAGAC
AGCAAAGATGTTTGGAAGATCAATGTTTGGGGATGATCCCTTTTTCAGGC
TGACATGGAGAGAGGCTCTTCGTCATCCACTGGGCAATTTTATTCGTCAT
CAAAAGTCATGTCCTACTCAAGAGGTGGTGAAGGAGACCACCCAAAATAT
TACGAAGCATCCTCTCAAATTACTCAAGGGCCAGATGGTGTAAGTATAAG
AATCACACTTTACCGAAAATCACCAAAGACGTCCACACCAACAACAACAC
CACCAACAACAACAACACCAGAACGAGATGTTGTCACCTATTGGTAGAGG
AGGTATGTTTGGTGGTGGAAGTGTGTTCCAAGAGATGAATCGTATGATGT
TCTTCATCCTATATGTTTGAAGAGTTTAATCGTATGGATCAAATGATGTC
ATCTTTTGGGATGCCAGGAGGCAGGATGGGACAGCCACCACACCACTCTG
CTATAGGTGACTCTTCTAATAGACAGCAAAGATGTTTGGAAGATCAATGT
TTGGGGATGATCCCTTTTTCAGGCTGACATGGAGAGAGGCTCTTCGTCAT
CCACTGGGCAATTTTATTCGTCATCAAAAGTCATGTCCTACTCAAGAGGT
GGTGAAGGAGACCACCCAAAATATTACGAAGCATCCTCTCAAATTACTCA
AGGGCCAGATGGTGTAAGTATAAGAATCACACTTTACCGAAAATCACCAA
AGACGTCCACACCAACAACAACACCACCAACAACAACAACACCAGAACGA
GATGTTGTCACCTATTGGTAGAGGAGGTATGTTTGGTGGTGGAAGTGTGT
TCCAAGAGATGAATCGTATGATGTTCTTCATCCTATATGTTTGAAGAGTT
TAATCGTATGGATCAAATGATGTCATCTTTTGGGATGCCAGGAGGCAGGA
TGGGACAGCCACCACACCACTCTGCTATAGGTGACTCTTCTAATAGACAG
CAAAGATGTTTGGAAGATCAATGTTTGGGGATGATCCCTTTTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041052XLOC_041052Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065504-exon-scaffold_44-1575043694:187248..187417TCONS_00065504-exon-scaffold_44-1575043694:187248..187417Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1575043694:177714..177845TCONS_00065504-exon-scaffold_44-1575043694:177714..177845Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1575043694:177275..177407TCONS_00065504-exon-scaffold_44-1575043694:177275..177407Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1575043694:176834..177003TCONS_00065504-exon-scaffold_44-1575043694:176834..177003Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1510915933:187248..187417TCONS_00065504-exon-scaffold_44-1510915933:187248..187417Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1510915933:177714..177845TCONS_00065504-exon-scaffold_44-1510915933:177714..177845Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1510915933:177275..177407TCONS_00065504-exon-scaffold_44-1510915933:177275..177407Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1510915933:176834..177003TCONS_00065504-exon-scaffold_44-1510915933:176834..177003Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1491911889:187248..187417TCONS_00065504-exon-scaffold_44-1491911889:187248..187417Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1491911889:177714..177845TCONS_00065504-exon-scaffold_44-1491911889:177714..177845Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1491911889:177275..177407TCONS_00065504-exon-scaffold_44-1491911889:177275..177407Clytia hemisphaericaexon
TCONS_00065504-exon-scaffold_44-1491911889:176834..177003TCONS_00065504-exon-scaffold_44-1491911889:176834..177003Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065504-proteinTCONS_00065504-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_44supercontigscaffold_44:176834..187417 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.476	25.7606	9.28021	10.0686	16.5906	14.4626	9.93284	12.8306	12.1159	10.355	11.0727	10.1071	12.5748	13.4666	17.5596	19.6711	14.0195	15.2219	14.2576	20.9949	20.4713	16.4363	38.137	36.6937	9.38265	12.9091	19.3598	20.6495	24.663	23.4626
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019376Myeloid_leukemia_factor
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065504 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top