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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065472 ID=TCONS_00065472|Name=TCONS_00065472|organism=Clytia hemisphaerica|type=transcript|length=1005bp
AAAAGATCTTATATATGTTTTCATGGCCACAATAGTCTTTATGTATCTGA
ATTTTATATCTCTAGAGTTTGCCATAAACTCCAAGGTCATCCTACTTTGA
ATCATCAATGCTCCTCCTTCATGCCACGGATTTTTCTGACTattaagttt
ttgtttgaaaaaaccaAGCACACACCAGTGCTGATTTGGTTGAACGACTT
TCGTTTTAAATGATCCCGAGAGAATGCGATAAATATGATATTAACCAGTA
CTGAAGGCTTTATCTTTGTATCTTGGAAAACTAGCTTCCATCCATTCTAG
TCACCAgatttatcatcatccattatCATACATTTTTTGTACATGTTGAA
CTTGAACTTTCCAACATACTTTGGATGGGTAAAAAGTCCTCTTTATAATG
TCTGTCATTTCGATCCGCATACAATCTCTGTAACGCTATACTCTGTTTCC
TACGATTCACCAGCGTATTTCTATCGTTGTTGTTCAAATCCAAACAAAAT
TTCCGACAGACTAACGTTCGAAAGACTGAAAGAGTCCCACCTCTATGAAA
TACTGTTTTTTCGTCACCTCCAAGCAGGGCTATGGTTTCCGCTTCATGTC
GCGCGATCTTTTTATGCTGAATAACGTAGTCCAAGATTCGGTTATAAACA
CAGGTAACCGTCAACAGAAAACATAAAATTACAATAAATACGAATAAATA
AGCGATCAACCATGCGTTTTCACAGTCTGATTTTGAATTGGACATTTTAT
GTTTACGATTTCGTTGAAAGTATCCCCATCTACATAATTTTGTTGCCAGT
GTTGGATATTTTCTTTTCGTTTACTTGGTTATGTGTTTTCTTTACAAGAC
AATATcaacttttcctttttctttttctctgcCCTTTCTCCTTGTTATCG
ATATTCGCTGATCACTTGCAATAAAAACGTTCTTCCGTATAACTTTTGAC
TTCGTTCACCACAAAAACCGCAAAACTGTAAAACCGATCAGTCAGCCAGT
Ccttc Run BLAST on NCBI transcript from alignment at scaffold_439:496222..497226 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065472 ID=TCONS_00065472|Name=TCONS_00065472|organism=Clytia hemisphaerica|type=transcript|length=1005bp|location=Sequence derived from alignment at scaffold_439:496222..497226 (Clytia hemisphaerica)
gaagGACTGGCTGACTGATCGGTTTTACAGTTTTGCGGTTTTTGTGGTGA
ACGAAGTCAAAAGTTATACGGAAGAACGTTTTTATTGCAAGTGATCAGCG
AATATCGATAACAAGGAGAAAGGgcagagaaaaagaaaaaggaaaagttg
ATATTGTCTTGTAAAGAAAACACATAACCAAGTAAACGAAAAGAAAATAT
CCAACACTGGCAACAAAATTATGTAGATGGGGATACTTTCAACGAAATCG
TAAACATAAAATGTCCAATTCAAAATCAGACTGTGAAAACGCATGGTTGA
TCGCTTATTTATTCGTATTTATTGTAATTTTATGTTTTCTGTTGACGGTT
ACCTGTGTTTATAACCGAATCTTGGACTACGTTATTCAGCATAAAAAGAT
CGCGCGACATGAAGCGGAAACCATAGCCCTGCTTGGAGGTGACGAAAAAA
CAGTATTTCATAGAGGTGGGACTCTTTCAGTCTTTCGAACGTTAGTCTGT
CGGAAATTTTGTTTGGATTTGAACAACAACGATAGAAATACGCTGGTGAA
TCGTAGGAAACAGAGTATAGCGTTACAGAGATTGTATGCGGATCGAAATG
ACAGACATTATAAAGAGGACTTTTTACCCATCCAAAGTATGTTGGAAAGT
TCAAGTTCAACATGTACAAAAAATGTATGataatggatgatgataaatcT
GGTGACTAGAATGGATGGAAGCTAGTTTTCCAAGATACAAAGATAAAGCC
TTCAGTACTGGTTAATATCATATTTATCGCATTCTCTCGGGATCATTTAA
AACGAAAGTCGTTCAACCAAATCAGCACTGGTGTGTGCTtggttttttca
aacaaaaacttaatAGTCAGAAAAATCCGTGGCATGAAGGAGGAGCATTG
ATGATTCAAAGTAGGATGACCTTGGAGTTTATGGCAAACTCTAGAGATAT
AAAATTCAGATACATAAAGACTATTGTGGCCATGAAAACATATATAAGAT
CTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065472-exon-scaffold_439-1491911889:496222..497226 | TCONS_00065472-exon-scaffold_439-1491911889:496222..497226 | Clytia hemisphaerica | exon |
| TCONS_00065472-exon-scaffold_439-1510915933:496222..497226 | TCONS_00065472-exon-scaffold_439-1510915933:496222..497226 | Clytia hemisphaerica | exon |
| TCONS_00065472-exon-scaffold_439-1575043694:496222..497226 | TCONS_00065472-exon-scaffold_439-1575043694:496222..497226 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_439 | supercontig | scaffold_439:496222..497226 . |
Blast
The following BLAST results are available for this feature:
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