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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065466 ID=TCONS_00065466|Name=TCONS_00065466|organism=Clytia hemisphaerica|type=transcript|length=1138bp
NNaaaatgtgagtccaatattggactcacagctcgaacccgtcttgtgta
catcaaattataaaaaaacacacgacgggtctcctgtctatgTAGTacac
ggcaatgaattttgaaataagccgtagatactgggctTGTGTACAGACAA
AAAAGCATGGAGCTGTCTTTTGTGTAGTTTCGagagtgtccgctaattag
acaGTTCACTGTTTGTATTCGGCAATATACGAATGGGTAAATACCAGCTG
TGGGTACGGATGAGTTAACATTTATGGCTGAAAATAAAACGCCCGGGCGG
GGTTAATTATCGAAGCCAAAATGGAGGTTGGGTATGTGTGGCCTAGAAGG
ATTTAATTTCGAGTTTTAGTACTAGTAGCTTTCTAATGTCTAAGTGTTAC
AAAAGTCAGAATATTTAACATTATTCTCCCTGAAGATCGAAAAAATAATA
GCCGGCCGGCACCATGTGAGCTaataactttcaaaaatattctttcatct
GTATCCACTGCTAatattctttattttgtatGTAAATTATTCCTGTATAT
AACCGCTCTCTTTTTTTCTTACAATATTTTTGTGTAAAGTAACCTCTATC
CAatataacttttaatttttttgcctgtgAGAAATACAGTAATTTTTTGT
ATGGCACTTTTCAGATCTTTTTATGCACaattacttttaaaaaaataatc
taaCCTGACCTGGCAGCAGGTGTAATTTGCGTAAACTCGTACTGGAAAGA
CACTCCTCTGAAGATTGCAGCGGGTCTTCTTTCCCAAGTGTCATTGCCAA
GATGCTACATTAGTATGTGTATGAAATTACAGTAAACCTTCGCTTATTCA
GAATCTTATCCACTTATTATAATTTCTTCAATTCGCAAATGTAAGCAAAA
GTTTTGGATCTAGTTGGTGGGATACAACACAATTATTACAACACAAAGTA
TAACTTTTCACGTGCTTTTATTAATAAACGAGTAATCGTGCCCTTTGTCT
TGTTCGCTTACTTTTTGGTATCTTATGTTTATCTTGCATTGTGCTCTTTC
CAAATAGATTTTATTATCGACATTATATCTTCATAAatcatttatttaaa
aaaatgtaaatttttgaccaaTCTGAATATAATCCGCA Run BLAST on NCBI transcript from alignment at scaffold_439:362091..363228 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065466 ID=TCONS_00065466|Name=TCONS_00065466|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at scaffold_439:362091..363228 (Clytia hemisphaerica)
TGCGGATTATATTCAGAttggtcaaaaatttacatttttttaaataaatg
atTTATGAAGATATAATGTCGATAATAAAATCTATTTGGAAAGAGCACAA
TGCAAGATAAACATAAGATACCAAAAAGTAAGCGAACAAGACAAAGGGCA
CGATTACTCGTTTATTAATAAAAGCACGTGAAAAGTTATACTTTGTGTTG
TAATAATTGTGTTGTATCCCACCAACTAGATCCAAAACTTTTGCTTACAT
TTGCGAATTGAAGAAATTATAATAAGTGGATAAGATTCTGAATAAGCGAA
GGTTTACTGTAATTTCATACACATACTAATGTAGCATCTTGGCAATGACA
CTTGGGAAAGAAGACCCGCTGCAATCTTCAGAGGAGTGTCTTTCCAGTAC
GAGTTTACGCAAATTACACCTGCTGCCAGGTCAGGttagattattttttt
aaaagtaattGTGCATAAAAAGATCTGAAAAGTGCCATACAAAAAATTAC
TGTATTTCTcacaggcaaaaaaattaaaagttatatTGGATAGAGGTTAC
TTTACACAAAAATATTGTAAGAAAAAAAGAGAGCGGTTATATACAGGAAT
AATTTACatacaaaataaagaatatTAGCAGTGGATACagatgaaagaat
atttttgaaagttattAGCTCACATGGTGCCGGCCGGCTATTATTTTTTC
GATCTTCAGGGAGAATAATGTTAAATATTCTGACTTTTGTAACACTTAGA
CATTAGAAAGCTACTAGTACTAAAACTCGAAATTAAATCCTTCTAGGCCA
CACATACCCAACCTCCATTTTGGCTTCGATAATTAACCCCGCCCGGGCGT
TTTATTTTCAGCCATAAATGTTAACTCATCCGTACCCACAGCTGGTATTT
ACCCATTCGTATATTGCCGAATACAAACAGTGAACtgtctaattagcgga
cactctCGAAACTACACAAAAGACAGCTCCATGCTTTTTTGTCTGTACAC
AagcccagtatctacggcttatttcaaaattcattgccgtgtACTAcata
gacaggagacccgtcgtgtgtttttttataatttgatgtacacaagacgg
gttcgagctgtgagtccaatattggactcacattttNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065466-exon-scaffold_439-1491911889:362091..363228 | TCONS_00065466-exon-scaffold_439-1491911889:362091..363228 | Clytia hemisphaerica | exon |
| TCONS_00065466-exon-scaffold_439-1510915933:362091..363228 | TCONS_00065466-exon-scaffold_439-1510915933:362091..363228 | Clytia hemisphaerica | exon |
| TCONS_00065466-exon-scaffold_439-1575043694:362091..363228 | TCONS_00065466-exon-scaffold_439-1575043694:362091..363228 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_439 | supercontig | scaffold_439:362091..363228 . |
Blast
The following BLAST results are available for this feature:
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