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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065465 ID=TCONS_00065465|Name=TCONS_00065465|organism=Clytia hemisphaerica|type=transcript|length=1397bp
GGACAAATAATGATAAACGACAGCAAAGAGGCAGGATTCACAAGATTGAA
ATTCGTACTCGTTAATGCACTCGAAAGTAGAAAGTTAATGATCAATACAA
GACCACCAAAACGTGATTTTTATCGTGAATCCATCAACCATTTCCAAGCA
TTTCTTCACCAGTGGAGTATTAAATTCAATCTTACAAACGTACTAAAGAA
AGCGACAACCTGGAGCTCCAACACAAATGGCGATGAATACATCATTGAAT
CTAACAGAGAGAATCGAAAGTATAGTTTTAAATTCTCAAGGAATAAATGC
TTTGGTGTACACACCTATGGAATTAGTTCCATTGATTCTCATAACCGCCA
TCTTTTTAGCTGGTATCCCTGGCAACTTGTTTGTTATTTACGTTTTTGGT
TGGAAACAAAGACATCAACGAAGCAGGTTTGAGCTCTTGTTGATGATCCT
CGGTTGTATTGATTTGGTGTCTTTACTTTTagtacccccgtcttttttct
ATTTGACGGTGACTAAATTTCAACAATGGCATTTTGGNTTTagtaccccc
gtcttttttttatttgacggtGACTAAATTTCAACAATGGTATTTTGGGA
AAGCGGCATGTAAGATCGTACCTAGTCTGTTACAAATCACAGTTAGTGTT
TCACAAGGGATGTTAATTTTGATTTGCTATGAAAGATACTCCGCCATTAT
GAAACCGTTTACCAATAAACATATATCGACTTTTCGTATTTTTGCGTGGT
TATCTAACGTGATTTTTGTGTCAATTGTATTTATATATCCATATGCATAC
ACCTTTGAACTGGTTGAGAGTGATCATGGAGTGAGTTGCGAACCGAGAGG
TGATCGACTGAATTATTTGCTTGCGTCTTCAACATTACAAGTTTTGCGAG
ATTTGATGAGTGCTACAACTATGGCAATTCTCTCCCGTAAAATGAATAAA
GCACTTTCAACAAATAACGACGTAACAACGTGGGACCGTGCGCAAATGAC
GCAGAAAAGTCGTAAAATGATAAAGACTGTTGTTGTAGTATTTACAATCT
TATGTTTGCCCGTCGACGTATTTCATCTTACGTATTATATTTTGATACGG
CAAAACGTTAACATGAGCCACATAAGAGATACGATCATTACTCCCGTAAA
TACGGCACTAAACGTAATACAGATTTCGAATTCCGTAGTTAACGTGTTTA
TATACTCGCAAATGCATGTATTTTTTCGTAAACACTTTATACACACAAAG
TTGAGGAGTAGAACTAGAACATGTACAGTCGTTTTGGACGGCAAATTTGA
ACTGCTTGATCCGGAGAATCTCTAACTCCTTGGAATTAAGAGACCTGGAA
ACTTTGAACATCGAAGGAGGTAAAAGAGAATTTATTTTGTAGGTTTC Run BLAST on NCBI protein sequence of TCONS_00065465-protein >TCONS_00065465-protein ID=TCONS_00065465-protein|Name=TCONS_00065465-protein|organism=Clytia hemisphaerica|type=polypeptide|length=221bp
MLILICYERYSAIMKPFTNKHISTFRIFAWLSNVIFVSIVFIYPYAYTFE
LVESDHGVSCEPRGDRLNYLLASSTLQVLRDLMSATTMAILSRKMNKALS
TNNDVTTWDRAQMTQKSRKMIKTVVVVFTILCLPVDVFHLTYYILIRQNV
NMSHIRDTIITPVNTALNVIQISNSVVNVFIYSQMHVFFRKHFIHTKLRS
RTRTCTVVLDGKFELLDPENL Run BLAST on NCBI transcript from alignment at scaffold_439:314323..315719 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065465 ID=TCONS_00065465|Name=TCONS_00065465|organism=Clytia hemisphaerica|type=transcript|length=1397bp|location=Sequence derived from alignment at scaffold_439:314323..315719 (Clytia hemisphaerica)
GAAACCTACAAAATAAATTCTCTTTTACCTCCTTCGATGTTCAAAGTTTC
CAGGTCTCTTAATTCCAAGGAGTTAGAGATTCTCCGGATCAAGCAGTTCA
AATTTGCCGTCCAAAACGACTGTACATGTTCTAGTTCTACTCCTCAACTT
TGTGTGTATAAAGTGTTTACGAAAAAATACATGCATTTGCGAGTATATAA
ACACGTTAACTACGGAATTCGAAATCTGTATTACGTTTAGTGCCGTATTT
ACGGGAGTAATGATCGTATCTCTTATGTGGCTCATGTTAACGTTTTGCCG
TATCAAAATATAATACGTAAGATGAAATACGTCGACGGGCAAACATAAGA
TTGTAAATACTACAACAACAGTCTTTATCATTTTACGACTTTTCTGCGTC
ATTTGCGCACGGTCCCACGTTGTTACGTCGTTATTTGTTGAAAGTGCTTT
ATTCATTTTACGGGAGAGAATTGCCATAGTTGTAGCACTCATCAAATCTC
GCAAAACTTGTAATGTTGAAGACGCAAGCAAATAATTCAGTCGATCACCT
CTCGGTTCGCAACTCACTCCATGATCACTCTCAACCAGTTCAAAGGTGTA
TGCATATGGATATATAAATACAATTGACACAAAAATCACGTTAGATAACC
ACGCAAAAATACGAAAAGTCGATATATGTTTATTGGTAAACGGTTTCATA
ATGGCGGAGTATCTTTCATAGCAAATCAAAATTAACATCCCTTGTGAAAC
ACTAACTGTGATTTGTAACAGACTAGGTACGATCTTACATGCCGCTTTCC
CAAAATACCATTGTTGAAATTTAGTCaccgtcaaataaaaaaaagacggg
ggtactAAANCCAAAATGCCATTGTTGAAATTTAGTCACCGTCAAATaga
aaaaagacgggggtactAAAAGTAAAGACACCAAATCAATACAACCGAGG
ATCATCAACAAGAGCTCAAACCTGCTTCGTTGATGTCTTTGTTTCCAACC
AAAAACGTAAATAACAAACAAGTTGCCAGGGATACCAGCTAAAAAGATGG
CGGTTATGAGAATCAATGGAACTAATTCCATAGGTGTGTACACCAAAGCA
TTTATTCCTTGAGAATTTAAAACTATACTTTCGATTCTCTCTGTTAGATT
CAATGATGTATTCATCGCCATTTGTGTTGGAGCTCCAGGTTGTCGCTTTC
TTTAGTACGTTTGTAAGATTGAATTTAATACTCCACTGGTGAAGAAATGC
TTGGAAATGGTTGATGGATTCACGATAAAAATCACGTTTTGGTGGTCTTG
TATTGATCATTAACTTTCTACTTTCGAGTGCATTAACGAGTACGAATTTC
AATCTTGTGAATCCTGCCTCTTTGCTGTCGTTTATCATTATTTGTCC Coding sequence (CDS) from alignment at scaffold_439:314323..315719 >TCONS_00065465 ID=TCONS_00065465|Name=TCONS_00065465|organism=Clytia hemisphaerica|type=CDS|length=666bp|location=Sequence derived from alignment at scaffold_439:314323..315719 (Clytia hemisphaerica)
TTAGAGATTCTCCGGATCAAGCAGTTCAAATTTGCCGTCCAAAACGACTG
TACATGTTCTAGTTCTACTCCTCAACTTTGTGTGTATAAAGTGTTTACGA
AAAAATACATGCATTTGCGAGTATATAAACACGTTAACTACGGAATTCGA
AATCTGTATTACGTTTAGTGCCGTATTTACGGGAGTAATGATCGTATCTC
TTATGTGGCTCATGTTAACGTTTTGCCGTATCAAAATATAATACGTAAGA
TGAAATACGTCGACGGGCAAACATAAGATTGTAAATACTACAACAACAGT
CTTTATCATTTTACGACTTTTCTGCGTCATTTGCGCACGGTCCCACGTTG
TTACGTCGTTATTTGTTGAAAGTGCTTTATTCATTTTACGGGAGAGAATT
GCCATAGTTGTAGCACTCATCAAATCTCGCAAAACTTGTAATGTTGAAGA
CGCAAGCAAATAATTCAGTCGATCACCTCTCGGTTCGCAACTCACTCCAT
GATCACTCTCAACCAGTTCAAAGGTGTATGCATATGGATATATAAATACA
ATTGACACAAAAATCACGTTAGATAACCACGCAAAAATACGAAAAGTCGA
TATATGTTTATTGGTAAACGGTTTCATAATGGCGGAGTATCTTTCATAGC
AAATCAAAATTAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065465-exon-scaffold_439-1491911889:314323..315719 | TCONS_00065465-exon-scaffold_439-1491911889:314323..315719 | Clytia hemisphaerica | exon |
| TCONS_00065465-exon-scaffold_439-1510915933:314323..315719 | TCONS_00065465-exon-scaffold_439-1510915933:314323..315719 | Clytia hemisphaerica | exon |
| TCONS_00065465-exon-scaffold_439-1575043694:314323..315719 | TCONS_00065465-exon-scaffold_439-1575043694:314323..315719 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_439 | supercontig | scaffold_439:314323..315719 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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