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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065451 ID=TCONS_00065451|Name=TCONS_00065451|organism=Clytia hemisphaerica|type=transcript|length=1485bp
GTAAAATTGTGATTTGatttcagactttaattttgcagccTGTGTATTGT
CTATTGATTCTGTCAGCAGAGGGAGGGCGGATATAAAAGGGTTGTGGCGG
ATATAAAAGGGTTGGGGCGTTTGGAGCAAGGGAACTGTGTACAGGAAAAC
AAGGAAAAATTGCCAAGAAGGTGCTGAACAACAGTTGCCAGTCTGATGTA
GACATGGGGCCTTTATTATGTATCAAGGAACTAGATTCagacatattttt
attttgaagtcttACTATTTACATTGTTTCTTAAAACCtttcatacatgt
tttttttataagcaattgtctgcccctacatcaggctcgcatcatgctta
gcattctattgttcacAAATGAAAGAGCCATcttttaggtaccaaaaact
gagccagcatatgcttataaacgttatgcttataaaagaaaaaacgaaaa
aacatgCACTCGTATAAAAGAAATAAgtacaaaaaattatgtcataGAAA
ATCATACAAAAAGTTCTTAAACTCGTGAAAATGGTGAATTAAGTTCAACC
GATTTAATATAAATCATGGAGGGTCTTCCTTTAATATGGTGCCTTAATTT
GGTGGATTGGTCGACTAAGTTTACTTTCCTTAATCTCGAACAAACGTTAA
ATCAACGTTCAAATGACGTTACATAAGCGATGGAAAAACGCTATGGTCTA
GCTGGGAAATGGTAAACAAGTTGACAACAATGCTGACCCTTAGATTCAAC
CCCNATGACGTTACATAAGCGATGGAAAAACGCTATGGTCTAGCTGGGAA
ATGGTAAACAAGTTGACAACAATGCTGACCCTTAGATTCAACCCCCATTT
TTAAGTTCTGCCAAATTGTCAGGTATGGATAAGGTCTGAGACACGGTTCG
TTTTGAAGAGGTAAAAATAAGTTAGTAAAAAAAGCTATGATAAAGTTATA
CAGAACATAATCTATTTCATACAGTCTTTGCAGTAACGTTTATCATTATC
CAAGTAAAACTTCTCTCCAGAGAGTGATTTTCGACACGAATAACAAGTGA
AGCAATCTTTGTGATATTGTTTGCCATCATAAACAACAAATTTAACGTTG
GTTTCTGTCAACGATTTGTAACAGATTGCACATTTTTTGGCATGGAATAT
GGAATAGCATTCCTGGTCATAGTTGTGTCCTTCATGTTTGTAAATGGCTT
TACCTGAAAATATTCCGATTAATAAAAACCAAAACTCCCAGAATAATTTT
AACTACTTTTCAAGCTATCTTAGTTTGGTAAGAATTTTCCTTTGTTAGAT
AGAAAGTGTAGATGCAAACCTAAAAGCCAAATTAATTCGAATACATTTGG
CCAAAgttacacgtttcttttttattaagaacacctaaaatttggctaag
cctggatgtgcttatttttttagcaattttcagcctaaaatgttcttaaa
tgcgttcttaatttttcagactactctaaatcgac Run BLAST on NCBI transcript from alignment at scaffold_439:607..2091 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065451 ID=TCONS_00065451|Name=TCONS_00065451|organism=Clytia hemisphaerica|type=transcript|length=1485bp|location=Sequence derived from alignment at scaffold_439:607..2091 (Clytia hemisphaerica)
gtcgatttagagtagtctgaaaaattaagaacgcatttaagaacatttta
ggctgaaaattgctaaaaaaataagcacatccaggcttagccaaatttta
ggtgttcttaataaaaaagaaacgtgtaacTTTGGCCAAATGTATTCGAA
TTAATTTGGCTTTTAGGTTTGCATCTACACTTTCTATCTAACAAAGGAAA
ATTCTTACCAAACTAAGATAGCTTGAAAAGTAGTTAAAATTATTCTGGGA
GTTTTGGTTTTTATTAATCGGAATATTTTCAGGTAAAGCCATTTACAAAC
ATGAAGGACACAACTATGACCAGGAATGCTATTCCATATTCCATGCCAAA
AAATGTGCAATCTGTTACAAATCGTTGACAGAAACCAACGTTAAATTTGT
TGTTTATGATGGCAAACAATATCACAAAGATTGCTTCACTTGTTATTCGT
GTCGAAAATCACTCTCTGGAGAGAAGTTTTACTTGGATAATGATAAACGT
TACTGCAAAGACTGTATGAAATAGATTATGTTCTGTATAACTTTATCATA
GCTTTTTTTACTAACTTATTTTTACCTCTTCAAAACGAACCGTGTCTCAG
ACCTTATCCATACCTGACAATTTGGCAGAACTTAAAAATGGGGGTTGAAT
CTAAGGGTCAGCATTGTTGTCAACTTGTTTACCATTTCCCAGCTAGACCA
TAGCGTTTTTCCATCGCTTATGTAACGTCATNGGGGTTGAATCTAAGGGT
CAGCATTGTTGTCAACTTGTTTACCATTTCCCAGCTAGACCATAGCGTTT
TTCCATCGCTTATGTAACGTCATTTGAACGTTGATTTAACGTTTGTTCGA
GATTAAGGAAAGTAAACTTAGTCGACCAATCCACCAAATTAAGGCACCAT
ATTAAAGGAAGACCCTCCATGATTTATATTAAATCGGTTGAACTTAATTC
ACCATTTTCACGAGTTTAAGAACTTTTTGTATGATTTTCtatgacataat
tttttgtacTTATTTCTTTTATACGAGTGcatgttttttcgttttttctt
ttataagcataacgtttataagcatatgctggctcagtttttggtaccta
aaagATGGCTCTTTCATTTgtgaacaatagaatgctaagcatgatgcgag
cctgatgtaggggcagacaattgcttataaaaaaaacatgtatgaaaGGT
TTTAAGAAACAATGTAAATAGTaagacttcaaaataaaaatatgtctGAA
TCTAGTTCCTTGATACATAATAAAGGCCCCATGTCTACATCAGACTGGCA
ACTGTTGTTCAGCACCTTCTTGGCAATTTTTCCTTGTTTTCCTGTACACA
GTTCCCTTGCTCCAAACGCCCCAACCCTTTTATATCCGCCACAACCCTTT
TATATCCGCCCTCCCTCTGCTGACAGAATCAATAGACAATACACAggctg
caaaattaaagtctgaaatCAAATCACAATTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065451-exon-scaffold_439-1491911889:607..2091 | TCONS_00065451-exon-scaffold_439-1491911889:607..2091 | Clytia hemisphaerica | exon |
| TCONS_00065451-exon-scaffold_439-1510915933:607..2091 | TCONS_00065451-exon-scaffold_439-1510915933:607..2091 | Clytia hemisphaerica | exon |
| TCONS_00065451-exon-scaffold_439-1575043694:607..2091 | TCONS_00065451-exon-scaffold_439-1575043694:607..2091 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_439 | supercontig | scaffold_439:607..2091 . |
Blast
The following BLAST results are available for this feature:
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