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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065422 ID=TCONS_00065422|Name=TCONS_00065422|organism=Clytia hemisphaerica|type=transcript|length=534bp
AGAAAACCTCCGTTGAAAATATATGAATTTAGATAAATAGTTATGGGCTC
AtacactttctttttcttttatttatcttttttcttttgcgcTACTAATG
ACAACAAATCGTTCTTTTATAGGAGTCAACCGGTACGCAGCCAACCCAGG
GTCGATTTCCACCACCAAGAGTGCCCCTATGGCACCCATTCTCGACCCTT
TCAACAATAAAGATGGCGGTGCGCAACCTCAAGCAGCTGGTGCTGTTCCT
TTCTTCACACCGGGTCAACCACAAAAGACGCGCCACCAAGACCAAAATTA
ATTTACAAAAAGTTCCGCGAAATTCATTGTAGGAGAGATGACTTACACAC
AACAAACAATTAATTATTAGCCACTTATTTTTTATCCAAtattatttttg
acaaaaattttaaataataattagaaaattaaaattataatgcGGGAATT
TTTTTTGTCTCTCTTACCAAACAAACAGATTGTACATTTATAATAgtgga
atttttatttaaataaaCTTATGTAAAACGAATG Run BLAST on NCBI transcript from alignment at scaffold_439:338408..339303- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065422 ID=TCONS_00065422|Name=TCONS_00065422|organism=Clytia hemisphaerica|type=transcript|length=896bp|location=Sequence derived from alignment at scaffold_439:338408..339303- (Clytia hemisphaerica)
AGAAAACCTCCGTTGAAAATATATGAATTTAGATAAATAGTTATGGGCTC
ATACACTTTCTTTTTCTTTTATTTATCTTTTTTCTTTTGCGCTACTAATG
ACAACAAATCGTTCTTTTATAGGAGTCAACCGGTACGCAGCCAACCCAGG
GTCGATTTCCACCACCAAGAGTGCCCCTATGGCACCCATTCTCGACCCTT
TCAACAATAAAGATGGCGGTGCGCAACCTCAAGCAGCTGGTGCTGTAAGT
AGATTTCCATTTTTTGTCGTGTTGTCTGGTGTTCCATGGTTTCTTTTGTT
TCTGAAGGTGTGATGGCCAAGTGGTCAAAGGCGTCAGCGTTTCATACCAG
GGATTCGCGGTTCGAATCCCCGCTCCTTCCAATGTTCTGTTCAGTTCATA
GATAGCCGAGCCGGCTGGCCATGGACCATGTAAAAAAAAATATCGACTCT
ACTATCTATCTATAAGTCCCTTCAGAAACTTCGCTCCCTACGAGGGTGTT
CTCAAGTCTTTTTGTTATCTCTACCAGTTGAAATTATCTTTTAATTTACT
TTTAAAAGATTTATCAGCATAATTACTCACGTTTTTTTTCTGAATTGTTT
TTTCAGGTTCCTTTCTTCACACCGGGTCAACCACAAAAGACGCGCCACCA
AGACCAAAATTAATTTACAAAAAGTTCCGCGAAATTCATTGTAGGAGAGA
TGACTTACACACAACAAACAATTAATTATTAGCCACTTATTTTTTATCCA
ATATTATTTTTGACAAAAATTTTAAATAATAATTAGAAAATTAAAATTAT
AATGCGGGAATTTTTTTTGTCTCTCTTACCAAACAAACAGATTGTACATT
TATAATAGTGGAATTTTTATTTAAATAAACTTATGTAAAACGAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065422-exon-scaffold_439-1575043694:339060..339303 | TCONS_00065422-exon-scaffold_439-1575043694:339060..339303 | Clytia hemisphaerica | exon |
| TCONS_00065422-exon-scaffold_439-1575043694:338408..338697 | TCONS_00065422-exon-scaffold_439-1575043694:338408..338697 | Clytia hemisphaerica | exon |
| TCONS_00065422-exon-scaffold_439-1510915933:339060..339303 | TCONS_00065422-exon-scaffold_439-1510915933:339060..339303 | Clytia hemisphaerica | exon |
| TCONS_00065422-exon-scaffold_439-1510915933:338408..338697 | TCONS_00065422-exon-scaffold_439-1510915933:338408..338697 | Clytia hemisphaerica | exon |
| TCONS_00065422-exon-scaffold_439-1491911889:339060..339303 | TCONS_00065422-exon-scaffold_439-1491911889:339060..339303 | Clytia hemisphaerica | exon |
| TCONS_00065422-exon-scaffold_439-1491911889:338408..338697 | TCONS_00065422-exon-scaffold_439-1491911889:338408..338697 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_439 | supercontig | scaffold_439:338408..339303 - |
Blast
The following BLAST results are available for this feature:
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