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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065388 ID=TCONS_00065388|Name=TCONS_00065388|organism=Clytia hemisphaerica|type=transcript|length=446bp
TAGAGAGAGAGCATAAAAGACAACAATCATTCTCAAGTTGAAGACCAAAA
AGAATACAGTAACACAAGCGAAAATTGAATCTTTCGATTTCCAACGTTTT
ACAAAAAGATGAAGTACGTCAATAGCTTTATTGTCGTTTATGCTGTGCAT
TGTCAATCAACAGTGGATAATGACGAAAAGGAACTTGAATGTTTTCTCGA
ACAAAATGCTGAATTATTGATCAACTCCAGCAATTATCCGAAGAAAATGA
TTTAGAACTTTATGATCAAATTTGAGGTCTTGCTGCTAAAGTTGCTTCGA
AAGAAATTCCATCTGCCGATCTGCCGTTGGTTTGTTCAGTCGACGAAGAA
GCAAATAATAAAcgaaggaaaaaatattttaatttacatgaattgtaaat
tttttaatgctggtcattaagaataaaatgattcTACTAGCTTAAA Run BLAST on NCBI transcript from alignment at scaffold_439:79516..80412- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065388 ID=TCONS_00065388|Name=TCONS_00065388|organism=Clytia hemisphaerica|type=transcript|length=897bp|location=Sequence derived from alignment at scaffold_439:79516..80412- (Clytia hemisphaerica)
TAGAGAGAGAGCATAAAAGACAACAATCATTCTCAAGTTGAAGACCAAAA
AGAATACAGTAACACAAGCGAAAATTGAATCTTTCGATTTCCAACGTTTT
ACAAAAAGATGAAGTACGTCAATAGCTTTATTGTCGTTTATGCTGTGCAT
TGTAAGTAAAATATTGTTAGACCCCGTTGGTTCAGGTTGGTTCATTAGCA
CGATACACACGATGTATGTCGCTCTTACATGAATTTAGAAAAGAAAACAA
TTTTCTTGACACAGGAGTAAAGTTCAAAATTGAAAATCTCGATCAAAATT
TATTCAGAATCCATTTTTCAGAGCTAGACATTCGAGGGGGTTTATCTAAA
GAAGCCTGCATTACTAAAAATAGACAAAATGAACAACAAATTTCATAAAA
GACGACGTATTTCGCCGTCCCCAACCCCGACCGAAAGTGACTGTACCACC
CCTAGCGATTCATTCCCTTTCGTTTATCACGGGAATTAACTACAGTCTAA
AAGAACGACAAATTACGCATGCGTGTTACAATGCAGGATCCTTTAGAGGA
ACAGACTGTTTGTTCCTTCACTTAAGTTATGCACTTTTTATCAAACTTTC
AGGTCAATCAACAGTGGATAATGACGAAAAGGAACTTGAATGTTTTCTCG
AACAAAATGCTGAATTATTGATCAACTCCAGCAATTATCCGAAGAAAATG
ATTTAGAACTTTATGATCAAATTTGAGGTCTTGCTGCTAAAGTTGCTTCG
AAAGAAATTCCATCTGCCGATCTGCCGTTGGTTTGTTCAGTCGACGAAGA
AGCAAATAATAAACGAAGGAAAAAATATTTTAATTTACATGAATTGTAAA
TTTTTTAATGCTGGTCATTAAGAATAAAATGATTCTACTAGCTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065388-exon-scaffold_439-1575043694:80262..80412 | TCONS_00065388-exon-scaffold_439-1575043694:80262..80412 | Clytia hemisphaerica | exon |
| TCONS_00065388-exon-scaffold_439-1575043694:79516..79810 | TCONS_00065388-exon-scaffold_439-1575043694:79516..79810 | Clytia hemisphaerica | exon |
| TCONS_00065388-exon-scaffold_439-1510915933:80262..80412 | TCONS_00065388-exon-scaffold_439-1510915933:80262..80412 | Clytia hemisphaerica | exon |
| TCONS_00065388-exon-scaffold_439-1510915933:79516..79810 | TCONS_00065388-exon-scaffold_439-1510915933:79516..79810 | Clytia hemisphaerica | exon |
| TCONS_00065388-exon-scaffold_439-1491911889:80262..80412 | TCONS_00065388-exon-scaffold_439-1491911889:80262..80412 | Clytia hemisphaerica | exon |
| TCONS_00065388-exon-scaffold_439-1491911889:79516..79810 | TCONS_00065388-exon-scaffold_439-1491911889:79516..79810 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_439 | supercontig | scaffold_439:79516..80412 - |
Blast
The following BLAST results are available for this feature:
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