TCONS_00065382 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065382
Unique NameTCONS_00065382
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2577

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065382 ID=TCONS_00065382|Name=TCONS_00065382|organism=Clytia hemisphaerica|type=transcript|length=2577bp
tagAATGGTTTGAAATGGAAGCAGTTTTTGAACCCGCCAAGGGGACCCCA
GATGGGTCTAAATATGGTGTTGCGAACCAGGCGGTATTACCTAGCTAAAC
ATGCAACATCTCTGGCGATAAAGATACGTGGAACAGTAAAGAGATAtgtt
tcatttggaaatgattaTCGTTTGGTGTGAGGGCAAATTGATTCTGTTTT
CATCAATATCACCCAAATTCAACCAATACAATGCACCTACCTACTTTGTG
TAATGGATGTTTTTGTATCGATACCGATCCAAGACTAGGTGAATCTTTAA
GCAGAGAAGATCAAATATTGGTTGCTTCGATGTGTTTAATTGGAGTGGCA
TTAGTTTCCAAGCTAAACATGCAACATATTTGGCTATAAAGATACGTGGA
ACAGTAAAGAGATAAtgtttcatttggaaatgattaTCGTTTGGTGTGAG
GGCAAATTGATTCTGTTTTCATCAATATCACCCAAATTCAACCAATACAA
TGTACCTACTTTGTGTAATGGATGTTTTTGTATCGATACCGATCCAAGAC
TAGGTGAATCTTTAAGCAGAGAAGATCAAATTTGGTATGCAAGTGTGGTT
GCTTGGATGTGTTTAATTGGAGTGGCATTAGTTTCCAAGCGAGTTTCATG
AGGAATTATCTGAACAACAAAGGATCGTATCAAGACTTCGTGCAATTCAC
ACACAGCAAACGTCAAACACTTATGAAAACTCTCGGTGAAAACAAAAAGC
ATGCAGATGCTGTCAACAACCTGGTCACCAAGGCAAATGCTCGTGCAAAG
CACCTAATGTCTTTGATAGCTGGTCATGAAACTGAAATCCAAAAGCTACA
AACATCTTTACAAGAAGAAAATAATTCATTGAAAGACTTACTATTAAAAC
GAACCAACCTTATGGAGACATGTAATGAAAACACGAGAAAGATTAAACAA
CTAGAGCTTCAGGCTGCTTCGTTTGAGGCTTATAAAACATTACCTGCTAA
TATGTGAGGTGGTTGTGCGTTTTGAATGTTAAATATATTTTACGTGGTCA
TTATTCGTCAAATCGTGATATGCAGATTATTGTTGTGAATTCTGTTTGTA
GTGATCAAATTGGGAGACAGCATCAAGCAGATCCTTCGTTTGATGGAAAA
TTATTACAATCGATTGGTGTTGAAATGATAGTTTGTGTAGTGTACAATAC
AAGTTCATTGGTTGTACATTGGTACCCATGtctcttttttcctttctttg
tCTTACTATTATTTATCTCAATATGAGCTTTTGATAGTTTTCTTTTCATG
TAAAGTTTGACCAGAACAGAAGGTATTTCTTGAAGATTTATTTTCTAATC
TTCAATAAGATATGATTCGTTCAGCTTGTATACAGTAATCCATTAATTTT
GactgaactttaaaaaaattgttttgccgTTAATCGACCGACCCctaatt
tattgcaaatttGAACAAGAATTTCTTTATCAAATCAGAACAACTATCAT
CGTGTCCGTCTCGTTCTATCTTGAGCTTAAGAACCGTGAATTCCCTTCGC
CGGTTCGTTAATTCTCTCATATATCGTCAAAATCTAGGGCCGGGTGATGG
CAAGCCATAATTTATTTGTGTCCAGCCTATAGTTATAAGATTTAGATGTT
GGTGATCTACCTTACAGTAAACATACTCTCTCCTTGACCNTATAAGATTT
GGATGTTGGTGATCTACCTTACAGTAAAAATACTCTCTCCCTGACTAATC
GGGCGATTAActtacttttcatttttaataacGTCTAGTAGCATAATTTA
TCGTACAATTTATTTAAATTCaatatcggagtttttgatttttctaaaaa
agtgatgcattgtgggattgttacgggagtattacaatagaattccctcg
aggaattcgtAAGAggtttctattgtaataccacaatgcatcgctttttt
agaaaaatcaaaaactctggtAAGATCTATCGACTACATAGTGTTGCTTG
TATTTCCAACATCATTTTTTGTAAGCTTGTAACATTTCATTATTTTGGAT
AGCTAGTTTTGTTTCTCTGTGCTCTTCAGTTTTCTTTACTTCATCACTGG
CTCATTTTTCATTTATGCATCATTGTAATCACATAATTTTCTTCAGTCTT
ATAACAATCCTGAAGGTCAATAATTTACTACTTTAAGTCAGGAACTTTCA
TACTCAAGAACCTCGATTGAGTGACATTCCTCTAACCATGCTCCAACACA
ATCGTCCTGCGATTGCGGAACGTGTATTAAATATATCTTTGCGTATAATT
CGAGCTTGAGAATTTAGAGCTTTTCGGGTGTTTATTATTGAGACATTTAC
ATAGTATTTAGAGCGACATACATGAATGTATTATCATTTgacaacaaaaa
tcttttttttttaaagatgtgTAATTTTTAACAGAAAATATAGCAAGAGT
TTATTATTTTCTAGTAGTATCCATTTTAGAAATTCCTACAAATCTATACA
ACATATTTATTTTATGGGAAGAATGATAAATGGGTGTGTGATGGAATATG
TAATCCCCTAACGAAATTCTAAGTCTT
Run BLAST on NCBI

protein sequence of TCONS_00065382-protein

>TCONS_00065382-protein ID=TCONS_00065382-protein|Name=TCONS_00065382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=119bp
MRNYLNNKGSYQDFVQFTHSKRQTLMKTLGENKKHADAVNNLVTKANARA
KHLMSLIAGHETEIQKLQTSLQEENNSLKDLLLKRTNLMETCNENTRKIK
QLELQAASFEAYKTLPANM
Run BLAST on NCBI

transcript from alignment at scaffold_439:4756..21008-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065382 ID=TCONS_00065382|Name=TCONS_00065382|organism=Clytia hemisphaerica|type=transcript|length=16253bp|location=Sequence derived from alignment at scaffold_439:4756..21008- (Clytia hemisphaerica)
TAGAATGGTTTGAAATGGAAGCAGTTTTTGAACCCGCCAAGGGGACCCCA
GATGGGTCTAAATATGGTGTTGCGAACCAGGCGGTATTACCTAGCTAAAC
ATGCAACATCTCTGGCCATAAAGATACGTAGAACAGTAAAGAGATAATGT
TTCATTTGGAAATGATGATCGTTTGGAGTGAGTGCAAATTGATTCCGTTT
TCATGAATATCTTCCAAATTCAACNTTGGAGTGAGGGCAAATTGATTCTG
TTTTCATGAATATCTTCCAAATTCAACAAATACAAAGCACCTACTTTGTG
TAATGGATGTTTTTGTATCGATACCGATCGAAGACAAGGTGAAACTTTAA
GCAGAGAAGATCAAATATGGTATGCAAATATTGTTGCTTGGATATGTTTA
AATGGACTGGCATTAGTTTCCAAGGTAATACTTAAGTTTTTTTATCGTCT
TAGTTATCATCCACATTCCTTAATGTATTTGATAAAGTTTACTTTTATTT
CAAAAGGTAAATTTTGACTATTCAAGCAATTCAAAAGACATGAACTTCTT
GTCGGCAAGTAGCCTGCTTTGTTTTTTTCGGCAAATTTCCGGATGACATA
CGGGGATAAGTGCTGGCAAAAGATGTAATCAAATTTTCTTTGTTGTCGGC
AAAGTGCCAGTTATTTTACTTTCTTTTCGGCATATTACTGAATAGTTTTT
TTATTGCCGGCAAACTGCCAGCTATTTTCCATAGTTACCGGCAGATTGCT
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AGTATCCCTTTAAACCAAATCCTTTTCTAAAAATAGGATTTAAACAAATG
TTGCAAGCAAACTAACTGTCTAACAGCTTATTGCTGGCTGTAATTAATGG
ATTACCGGACTCAAAAAGAGTGTCATCGGCAAGATAACTTTTTATTTTTA
ATGCCTTTTTCATCTACTTTTTAAATTGTTGGTAATTTTATTTTGGTTAT
TAGACATCATTCTATTTTACCAAATAAAATCAAACANGGTTATTAGACAT
CATTCTATTTTACCAAATAAAATCAAACATGAGTTTGGTAACAGTTTGGA
TTTATTTATTTAGATCCGTGTATTTTAAAGCCAACTTTACACAGGTATTT
GTCTGTGTTTAGTGATCGTAGTTGTTCCCTTATCATCCTTTATTGAATTG
TCTTTCCTTTCTTCAGATGCTGAAGGAAATTTTTTTTATCTAGGCCCATA
ACTGTCTTTTTAGATGTTTTATTTAATGCAAATTTATTCGGCATTTTATA
TTATCCGTTGGATTGATTTTGTCAATCGGAAACTNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGCTGAAGG
AAATTTTTTTTATCTAAGCCCATAACTTTTTTTTTAGATGTTTTATTTAA
TGCAAATTTATTCGGCATTTTATATTATCCATTGGATTGATTTTGTCAAT
CNTTTTTAGATGTTTTATTTAATGCAAATTTATTCGGCATTTTATATTAT
CCATTGGATTGATTTTGTCAATCGGAAACTTCTTGCCGGCAACTAGCCGG
CTTTCTTTTTGTCGGCAAATTGTAGGATGACATACGGGGATAGGTGCCGG
CAAAAAATTCAAACGAATTTTCTTGATTGTCGGTAAAGTGCTGGTTATTT
TACTTTCTTTTCGGCATATTACTGAATAGTTTTCTTCATTGCTGGAAAAT
TGCCAGCTATTTTATATAGTTACCGGCAGATTGCTCGCAAAAGTCTCCCT
TTAAACCAAATCCTTTTCTAAAAATAGGATTTACACAAATGTTGCCAGCA
GACTGTCTAACAGCTTATTGCTGGCTGTAATTAATAGATTGCGGGACTCA
AAAAGAGTGTCACCGGCAAGATGCCTTTTAATGCCTTTTTCANAAGAGTG
TCACCGGCAAGATAACTTTTTATTTTTAATGCCTTTTTCATCTACTTTTT
AAATTGTTGCTAATTTTATTTTGGTTATTAGACACATTCTATTTTACCAA
ATAAAATCAAACATGAGTTTGGTAACAGTTTGGATTTATTTATTTAGATC
CGTGTATTATAAAGCCAACTTTACACAGATATTTGTATGTGTTTAGTGAT
CGTAGTTGTTCACTTATCATCCTTTATTGAATTTTCTTTCCTTTCTTCAG
ATGCTGAAGGAAATTTTTTTTATCTAAGCCCATAACTTTCTTTTCAGATG
TTTTATTTAATGCAAATTTATTCGGCATTTTATATTATCTGTTGGATTGA
TTTTGTCAATCGGAAACTTCTTGTCGGCAAATTGTTGGATGACATACGGG
GATAAGTGCCGGCAAAAAATTCAAACAAATTTTCTTGGTTGTCGGTAAAG
TGCCGGCTATTTTACTTTTTTTTCGGCATATTACTGAATAGTTTTCTTAT
TGCCGGAAAATTGCCAGCTATTTTATATAGTTACCGGCAGATTCCAGCAA
AAGTCTCCCTTTAAACCAAATCCTTTTCTAAAAATAGGATTTACACAAAT
GTTGCCAGCAACTGTCTAACAGCTTATTGCAGGCTGCAATTAATGGATTG
CTGGACTCAAAAAGAGTGTCACCGGCAAGATGCCTTTTAATGCCTTTTTC
ATCTACTTTTTAAATTGTTGCTGATTTTATTTTGGTTATTAGACATCATT
CTATTTTACCAAGTAAAATCAAACATGAGTTTGGTAACAGTTTTGATTTA
ATTATATAGATCCGTGTATTTTAAAGCCAACTTTACACAGATGTTTGTCT
GTGTTCTGTGATCATAGTTGTTCACTTATCTTCCTTTATTGAATTGTTTT
TTCTTTGCTTCACAAAATAGTACTATTACACTTTTTCTTCAGGGAGATTC
GTGTTTCTCTCCGATGTTTTCGTGTTTCACAATGAAAACATAAATTTTGT
TTTTGTAGAGTTTCATATAGAAAACTACGAAAAAATTTTCTATAAGAAGT
TTGTGCTTTTTGCTTTGTAATTTAAGCACAATTTATCAGGCAGTTTGAAT
TGTTGAGAGATTTCCTCTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACACAGATATTTGTCTG
TGTTTAGTGATCGTAGTTGTTCACTTATCATCCTTTATTGAATTGTCTTT
CCTTTCTTCAGATGCTGAAGGAAATTTTTTTTATTTAAGCCCATAACTTT
CTTTTCAGATGTTTTATTTAATGCAAATTTATTCGGCATTTTATATTATC
CGTTGGATTGATTTTATCAATCGGAAACTTCTTGCCGGCAACTAACCAGC
TTTCTTTTTGTCGGCAAATTGTAGAATGACATACAGGGATAAATGCCGGC
AAAAGATGGAAACAATTTTCTTTGTTGTTAGCAAAGTGCAGGCGATTTTT
TTTTTGTCGGCATATTACTGAATAGTTTTCTTCATTGCCTGAAAATTGCC
AGTTTTTTTCTATAGTTACCGGCAAATTCCAGCAAAAGTCTCCCTTTAAA
CGTAATCCTTTTCAAAAATAGGATTTACACAAATGTTGCCAGCAAACTGT
CTAACAGCTTATTGCAGGCTGTAATTAATGGATTGCGGGACTCAAAAAGA
GTGTCACCGGCAAGATGCCTTTTAATGCCTTTTTCATCTACTTTTTAAAT
TGTTGCTGATTTTATTTTGGTTATTAGACATCCTTCTATTTTACCAAATA
AAATCAAACATGAATATGGTAACAGTTTGGGTTTATTCATTTAAATTCGT
GTATTTTAAAGCCAACTTTACACAGAAAGTTGTCTGTGTTCTGTGATCAT
AGTTGTTCACTTATCTTCCTTTATTGAATTGTTTTTTCTTTGCTTCACAA
AATAGTACTATTCCACTTTTTCTTCAGGGAGATTCGTGTTTCTCTCCGAT
GTTTTCGTGTTTCACAATGAAAACATAAATTTTGTTTTTGTAGAGTTCTT
CAGATGCTGAAGGAAATTTTTTTTATCTAAGCCCATAACTTTCTTTTTAG
ATGTTTCATTTAATTCAGATTTATGCAGCCTATTATATTATCCGTTGGAT
TGATTTTGTCAATCCAAAACTTCTGGCCGGCAACTAGCCAGCTTTGTTTT
TGTTGGCAAATTGTAGGATGACATTAGTAGATAAGTGCCGGCAAAAGGTT
CAATCAAATTTTCTTGGTTGACGGTAAAGTGCCGGCTATTTTACTTTGTT
GTCGGCTATATTACTGAATAGTTTTCTTCATTGCCGGCAAATTGCCAGCT
ATTTTATATAGTTACCGGCAGATTCGAGCAAAAGTCTCCCTTTAAACCTA
ATGCTTTTCTAAAAATAGGATTTCCACAAATGTTGCCAGCAAACTGTCTA
ACAGCTAAGCTGGCTGTAATTATTGCATTTCCGGACTCAAAAAGAGTGTC
ACCGGCAAGATGCCTTTTAATGCCTTTTTCATCTACTTTTTAAATTGTTG
CTGATTTTATTTTGGTTATTAGACATCATTCTATTTTACCAAATAAAATC
AAACATGAATTTGGTAACAGTTTGGGTTTATTTATTTAAATTCGTGTATT
TTAAAGCGAACTTTACACAGAAAGTTGTCTGTGTTCTGTAGTTGTTAACT
TATCATCCTTTATTGAATTGTCTTTTCTTTGCTTCACAAGATAGTACTCT
CTCGCCTTTCTTCAGATGCTGAAGGAAATTTTTTTTATTTAAGCCCATAA
CTTTCTTTTTAGATATTTCATTTAATGCAGATTTTACCACCATTTTAAAA
TACCCGTTGAATTGATTTTGTCTATCGTTACCTAGCTAAACATGCGACAT
CTCTGGCGATAAAGATACGTGGAACAGTAAAGAGATATGTTTCATTTGGA
AATGATTATCGTTTGGTGTGAGGGCAAATTGATTCTGTTTTCATCAATAT
CACCCAAATTCAACCAATACAATGCACCTACCTACTTTGTGTAATGGATG
TTTTTGTATCGATACCGATCCAAGACTAGGTGAATCTTTAAGCAGAGAAG
ATCAAATATTGGTTGCTTCGATGTGTTTAATTGGAGTGGCATTAGTTTCC
AAGGTAATGCTTAAGTTTGTTTATCATCTTAGTTATCATCCACATTCCTT
AATGTATTTGATAAAGGTTACATTTATTTCAAAAGGTAAATTTTGACCAT
TCAAGCGATTCTAAAGACATGAACTTCTTGTCGGCAACTGGCCAGCTTTG
TTTTTGTTGGCAAATTGCCGGATGACATACAGGGATAAATGCCGGCAAAA
GATGTAATCAATTTTCTTTGCTGTTAGCAAAGTGCCGGTGATTTTTCTTT
TTGTCGGCATATTACTGAATAGTTTTCTTCATTGCCTGAAAATTGCCAGT
TTTTTTCTATAGTTACCGGCAGATTCCAGCAAAAGTCTCCCTTTAAACCA
AATCCTTTTCTAAAAATAGGATTTACACAAATGTTGCCAGCAAACTGTCT
AACAGCTTATTGCAGGCTGTAATTAATGGATTGCTGGACTCAAAAAGAGT
GTCACTGGGAAGATGCCTTTTAATGCCTTTTTCATCTACTTTTTAAATTG
TCGCTGATTTTATTTTGGTTATTAGACATCCTTCTACTTTACCAAATAAA
ATCAAACATGAATATGGTAACAGCTTGGGTTTATTCATTTAAATTCGTGT
ATTTTATAGCCAACTTTACACAGAAAGTTGTCTGTGTTCTGTGATCGTAG
TTGTTCACTTATCATCCTTTATTGAATTGTCTTTTCTTTCTTCAGATGCT
GAAGGAAATTTTTTTTATCTAAGCCCATAACTTTCTTTTTAGATGTTTCA
TTTAATTCAGATTTATGCAGCCTATTATATTATCCGTTGGATTGATTTTG
TCAATCCGAAACTTCTGGCCGGCAACTAGCCAGCTTTGTTTTTGTTGGCA
AATTGTAGGATGACATACGGGGATAAGTGCCGGCAAAGTTTCAATCAAAT
TTTCTTCGTTGTCGGCAAAGTGCCGGCTATTTTTCTTTGTTGTCGACTAT
ATTACTGAATAGTTTTCTTCATTGCCTGCAAATTGCCAGCTATTTTATAT
AGTTGCCTGCAGATTCCAGCAAAAGTCTCCCTTTAAACCAAATGCTTTTT
TAAAAATAGGATTTCCACAAATGTTGCCAGCAAACTGTCTAACAGCTTAT
TGCTGGCTGTAATTAATGCATTGCCGGACTCTAAAAGAGTGTCACCGGCA
AGATGCCTTTTAATGCCTTTTTCATCTACTTTTTAAATTGTTGCTGATTT
TATTTTGGTTATTAGACATCATTCTATTTTACCAAATAAAATGAAACATG
AATTTGGTAACAGTTTGGGTTTATTTATTTAAATTCGTGTATTTTAAAGC
GAACTTTACACAGAAAGTTGTCTGTGTTCTGTAGTTGTTAACTTATCATC
CTTTATTGAATTGTCTTTCCTTTCTTCAGATGCTGAAGGAAATTTTTTTA
TTTAAGCCCATAACTTTCTTTTTAGATGTTTCATTTAATGCAGACTTATG
CAGCACATCATATTATCCGTTGGATTGATTTTGTCAATCGAAAACTTCTT
GCCGGCAACTAGCCAGCTTTGTTTTTGTCCGCAAATTGTAGGATGACATA
CGGGGATAAGTGCCGGCAAAAGATTCAATCAAATTTTCTTGGTTGTCGGC
AAAGTGCCGGCTATTTTACTTTGTTGTCGGCAATATTACCGAATAGTTTT
TTTCATTGCCGGCAAATTGCCAACTATTTTATTTAATGCAAATTTTACCA
TCATTTTAAAATATCCGTTGAATTGATTTTGTCTATCGTTACCTAGCTAA
ACATGCAACATATCTGGCGATAAAGATACGTGGAACAGTAAAGAGATATG
TTTCATTTGGAAATGATTATCGTTTGGTGTGAGGGCAAATTGATTCTGTT
TTCATCAATATCACCCAAATTCAACCAATACAATGCANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGTGTTTAATTGGAGTGGCATTAGTTTC
CAAGGTAATGCTTAAGTTTGTTTATCATCTTAGTTATCATCCACATTCCT
TAATGTATTTGATAAAGGTTACATTTATTTCAAAAGGTAAATTTTGACCA
TTCAAGCGATTCTAAAGACATGAACTTCTTGTCGGCAACTAGCCAGCTTT
GTTTTTGTTGGCAAATTGCCGGATGACATACAGGGATAAATGCCGGCAAA
AGATGTAATCAATTTTGTTTGTTGTTAGCAAAGTGCCGGCGATTTTTTTT
TGTCGGCATATTACTGAATAGTTTTTATCATTGCCGGAAAGTTGCCAGTT
ATTTTCTATAGTTGCCGGCAAATTCCAGCAAAAGTCTCCCTTTAAACCAA
ATCCTTTTCAAAAATAGGATTTCCACAAATGTTGCCAGCAAACTGTCTAA
CAGCTTATTGCAGGCTGTAATTAATGGATTGCCGGACTCAAAAAGAGTGT
CACCGGCAAGATGCCTTTTAATGCCTTTTTCATCTACTTTTTAAATTGTT
GCTGATTTCATTTTAGTTATTAGACATCATTCTATTTTACCAAATAAAAC
GATCAAACATGAATTTGGTAACAGTTTGGGTTTATTTATTTAAATTCGTG
TATTNTAAAATCAAACATGAATTTGGTAACAGTTTGGGTTTATTTATTTA
AATTCGTGTATTTTAAAGCCAACTTTACACAGAAAGTTGTCTGTGTTCTG
TAGTTGTTAACTTATTATCCTTTATTGAATTGTCTTTTCTTTGCTTCACA
AGATAGTACTCTTTCGCCTTTCTTCAGATGCTGAAGGAAATCTTTTTTAT
TTAAGCCCCTAACTTTCTTTTTAGATATTTCATCTAATGCAGATTTTACT
ATCATTTTAAAATATCCGTTGAATTGATTTTGTCTATCGTTACCTAGCTA
AACATGCAACATATTTGGCTATAAAGATACGTGGAACAGTAAAGAGATAA
TGTTTCATTTGGAAATGATTATCGTTTGGTGTGAGGGCAAATTGATTCTG
TTTTCATCAATATCACCCAAATTCAACCAATACAATGTACCTACTTTGTG
TAATGGATGTTTTTGTATCGATACCGATCCAAGACTAGGTGAATCTTTAA
GCAGAGAAGATCAAATTTGGTATGCAAGTGTGGTTGCTTGGATGTGTTTA
ATTGGAGTGGCATTAGTTTCCAAGGTAATGCTTGAGTTTGTTTATCATCT
TAGTTATCATCCACATTCCTTAATGTATTTGATAAAGGTTACATTTATTT
CAAAAGGTAAATTTTGACCATTCAAGCGATTTATGAGAATCTCGACAGTT
TCTTTCAGCGATATCATATTGAACTGATTGACAGATTGATTGATTGGGAG
ATTGATTGATAGATTTATTTATGAATAGTTTAAATTTTTTCGATTGATTG
ACTNGTCTAAAAGATTTATGGGAATCGACAGTTTCTTTCAGCGATATCAT
ATTGAACTGATTGACAGATTGATTGATTGGGAGATTGATTGATAGATTTA
TTTATGAAATAGTTGAAATTTTTTCGATTGATTGACGATAGATTTCTAAT
TGTTTTGGCCTGATCTCAATTGAAAGAAGGAGAAAATAACGTAATCTCAG
ATGAGATGGAGTTTTTATAAGATACTTTAATAATTGGTCATCTGAAGTAA
TAAAAATGACGTGTCCTTTAGAAAAAGTAACAAAATTGTTTTATTACTTG
TAACGACCAACCCAATCAAAATAAGAGCTTGTAAAAACTTCATCTCGTCC
CAACAATCAGCCTTATTGACTGATATCATTGGTTGAATTTTGACAATCAC
GAATAAAATTGTACACTCATCAATTTGAATTTTATGATTTGTCTGTCAGT
GAGGTCTATGAAAACGATCTTCAAGAGAACCCACCTCGTGAGAATCTTTT
CATAATCTTTTTTACAAGCTATTCATAAAAAGAAAACTTTTCTAAGCTAT
TCCAAAGATGCAAAAAATATTTGATTTTCTTGCTTCTATTGAAGAACCCT
GAAGAGCCTAATTAACTAATTACCCACATTTTTCTGATTCTCGCACACGT
TTTTTTATAAGAACATCTAAATATTTTGGTAAAAAGCTTTTGGTTCCGAT
ATTCTTAACTTCTTCATTTTTAAGCCTAAAAATGCTCTAAACGTGTTCTT
CTTCCACCATTTTAGCATACTTTTGTCTATTTCGTAAGAAATCGGGCATT
TTAGAGTTTGCAAACCTTAAATGTTCTTAACTAGTTTTTATTATATATGC
AATCAAAGAGCTTGTTCTTCTATAGTTTTTTCTTATAAAAAAAGTGTACT
CAAAATGAAAATGTCGCCTGGTTTAGCATACTATTTCGGGTTGTCTGTCC
ATCCTTTTCATGAAATTCCTTGTCTTTTCATTTCAGCGAGTTTCATGAGG
AATTATCTGAACAACAAAGGATCGTATCAAGACTTCGTGCAATTCACACA
CAGCAAACGTCAAACACTTATGAAAACTCTCGGTGAAAACAAAAAGCATG
CAGATGGTATGTATTATTCTCTTAACTTGTCCCCAGGCTCTTTTACCTTT
ATGGTCACTTGATAAGATGTCTGACCCTAGGGAGTCAGAACTTTAGCTGT
AGCTTAGGAGACTCTGTCGATTTGCTTGAGACTCTGAGACTCTTTTTAGA
AATTTTTGCCTTTAGGGTATTCTGATTGAATGAAATGAAAAGATGTTTTC
TACTTTGGGTAGAAAAAATCTTCATTTTTCATTATCATTTTCAAAGATTT
TGGAAGATATTTTCTCCAGCGAGGTGTTACCTTTCCATATATCTTTTCTA
CTTCAAGAGCAATGTATCAAAATGTGTTGACCATTAAGTTTTGGAACAGA
CTTTAATAAAACTATTCCTCCATTCATAATTCCAGCTGTCAACAACCTGG
TCACCAAGGCAAATGCTCGTGCAAAGCACCTAATGTCTTTGATAGCTGGT
CATGAAACTGAAATCCAAAAGCTACAAACATCTTTACAAGAAGAAAATAA
TTCATTGAAAGACTTACTATTAAAACGAACCAACCTTATGGAGACATGTA
ATGAAAACACGAGAAAGATTAAACAACTAGAGCTTCAGGCTGCTTCGTTT
GAGGCTTATAAAACATTACCTGCTAATATGTGAGGTGGTTGTGCGTTTTG
AATGTTAAATATATTTTACGTGGTCATTATTCGTCAAATCGTGATATGCA
GATTATTGTTGTGAATTCTGTTTGTAGTGATCAAATTGGGAGACAGCATC
AAGCAGATCCTTCGTTTGATGGAAAATTATTACAATCGATTGGTGTTGAA
ATGATAGTTTGTGTAGTGTACAATACAAGTTCATTGGTTGTACATTGGTA
CCCATGTCTCTTTTTTCCTTTCTTTGTCTTACTATTATTTATCTCAATAT
GAGCTTTTGATAGTTTTCTTTTCATGTAAAGTTTGACCAGAACAGAAGGT
ATTTCTTGAAGATTTATTTTCTAATCTTCAATAAGATATGATTCGTTCAG
CTTGTATACAGTAATCCATTAATTTTGACTGAACTTTAAAAAAATTGTTT
TGCCGTTAATCGACCGACCCCTAATTTATTGCAAATTTGAACAAGAATTT
CTTTATCAAATCAGAACAACTATCATCGTGTCCGTCTCGTTCTATCTTGA
GCTTAAGAACCGTGAATTCCCTTCGCCGGTTCGTTAATTCTCTCATATAT
CGTCAAAATCTAGGGCCGGGTGATGGCAAGCCATAATTTATTTGTGTCCA
GCCTATAGTTATAAGATTTAGATGTTGGTGATCTACCTTACAGTAAACAT
ACTCTCTCCTTGACCNTATAAGATTTGGATGTTGGTGATCTACCTTACAG
TAAAAATACTCTCTCCCTGACTAATCGGGCGATTAACTTACTTTTCATTT
TTAATAACGTCTAGTAGCATAATTTATCGTACAATTTATTTAAATTCAAT
ATCGGAGTTTTTGATTTTTCTAAAAAAGTGATGCATTGTGGGATTGTTAC
GGGAGTATTACAATAGAATTCCCTCGAGGAATTCGTAAGAGGTTTCTATT
GTAATACCACAATGCATCGCTTTTTTAGAAAAATCAAAAACTCTGGTAAG
ATCTATCGACTACATAGTGTTGCTTGTATTTCCAACATCATTTTTTGTAA
GCTTGTAACATTTCATTATTTTGGATAGCTAGTTTTGTTTCTCTGTGCTC
TTCAGTTTTCTTTACTTCATCACTGGCTCATTTTTCATTTATGCATCATT
GTAATCACATAATTTTCTTCAGTCTTATAACAATCCTGAAGGTCAATAAT
TTACTACTTTAAGTCAGGAACTTTCATACTCAAGAACCTCGATTGAGTGA
CATTCCTCTAACCATGCTCCAACACAATCGTCCTGCGATTGCGGAACGTG
TATTAAATATATCTTTGCGTATAATTCGAGCTTGAGAATTTAGAGCTTTT
CGGGTGTTTATTATTGAGACATTTACATAGTATTTAGAGCGACATACATG
AATGTATTATCATTTGACAACAAAAATCTTTTTTTTTTAAAGATGTGTAA
TTTTTAACAGAAAATATAGCAAGAGTTTATTATTTTCTAGTAGTATCCAT
TTTAGAAATTCCTACAAATCTATACAACATATTTATTTTATGGGAAGAAT
GATAAATGGGTGTGTGATGGAATATGTAATCCCCTAACGAAATTCTAAGT
CTT

Coding sequence (CDS) from alignment at scaffold_439:4756..21008-

>TCONS_00065382 ID=TCONS_00065382|Name=TCONS_00065382|organism=Clytia hemisphaerica|type=CDS|length=720bp|location=Sequence derived from alignment at scaffold_439:4756..21008- (Clytia hemisphaerica)
CTGTCAACAACCTGGTCACCAAGGCAAATGCTCGTGCAAAGCACCTAATG
TCTTTGATAGCTGGTCATGAAACTGAAATCCAAAAGCTACAAACATCTTT
ACAAGAAGAAAATAATTCATTGAAAGACTTACTATTAAAACGAACCAACC
TTATGGAGACATGTAATGAAAACACGAGAAAGATTAAACAACTAGAGCTT
CAGGCTGCTTCGTTTGAGGCTTATAAAACATTACCTGCTAATATGTGAAT
GAGGAATTATCTGAACAACAAAGGATCGTATCAAGACTTCGTGCAATTCA
CACACAGCAAACGTCAAACACTTATGAAAACTCTCGGTGAAAACAAAAAG
CATGCAGATGCTGTCAACAACCTGGTCACCAAGGCAAATGCTCGTGCAAA
GCACCTAATGTCTTTGATAGCTGGTCATGAAACTGAAATCCAAAAGCTAC
AAACATCTTTACAAGAAGAAAATAATTCATTGAAAGACTTACTATTAAAA
CGAACCAACCTTATGGAGACATGTAATGAAAACACGAGAAAGATTAAACA
ACTAGAGCTTCAGGCTGCTTCGTTTGAGGCTTATAAAACATTACCTGCTA
ATATGTGAATGAGGAATTATCTGAACAACAAAGGATCGTATCAAGACTTC
GTGCAATTCACACACAGCAAACGTCAAACACTTATGAAAACTCTCGGTGA
AAACAAAAAGCATGCAGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040987XLOC_040987Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065382-proteinTCONS_00065382-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065382-exon-scaffold_439-1575043694:20902..21008TCONS_00065382-exon-scaffold_439-1575043694:20902..21008Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1575043694:11606..11860TCONS_00065382-exon-scaffold_439-1575043694:11606..11860Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1575043694:8285..8561TCONS_00065382-exon-scaffold_439-1575043694:8285..8561Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1575043694:6953..7072TCONS_00065382-exon-scaffold_439-1575043694:6953..7072Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1575043694:4756..6573TCONS_00065382-exon-scaffold_439-1575043694:4756..6573Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1510915933:20902..21008TCONS_00065382-exon-scaffold_439-1510915933:20902..21008Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1510915933:11606..11860TCONS_00065382-exon-scaffold_439-1510915933:11606..11860Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1510915933:8285..8561TCONS_00065382-exon-scaffold_439-1510915933:8285..8561Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1510915933:6953..7072TCONS_00065382-exon-scaffold_439-1510915933:6953..7072Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1510915933:4756..6573TCONS_00065382-exon-scaffold_439-1510915933:4756..6573Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1491911889:20902..21008TCONS_00065382-exon-scaffold_439-1491911889:20902..21008Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1491911889:11606..11860TCONS_00065382-exon-scaffold_439-1491911889:11606..11860Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1491911889:8285..8561TCONS_00065382-exon-scaffold_439-1491911889:8285..8561Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1491911889:6953..7072TCONS_00065382-exon-scaffold_439-1491911889:6953..7072Clytia hemisphaericaexon
TCONS_00065382-exon-scaffold_439-1491911889:4756..6573TCONS_00065382-exon-scaffold_439-1491911889:4756..6573Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:4756..21008 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.04432	0.628484	0	0.724159	0.21296	0.514755	0.761867	0.437383	13.7957	10.6776	10.7429	11.8597	5.44112	7.64772	1.80402	2.03468	1.82255	1.80775	2.65933	1.10471	0	0	9.58104e-06	0.717419	0	0	0.481302	1.46631	0.858934	0.550701
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065382 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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