TCONS_00065355 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065355
Unique NameTCONS_00065355
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length949

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065355 ID=TCONS_00065355|Name=TCONS_00065355|organism=Clytia hemisphaerica|type=transcript|length=949bp
CTTTGATACTTTGATCGCTTAAACCGCTTTCGGAAGACACGTTAATCGTA
CAGTCAGACAGGCGAAACTGTTCCAAACTTACTTCAGAAAATACGTTAGA
ATCATCTCATAATGTGTTGGTGTCATTATTATGAAATTCGGATGCTGTAA
TTGTCAATGGTTTTGTCATCTACTTATCACATTATGAAAACAGAGtaAAA
TTGAAGAGACAACGCACAAGACGTGATGGTTACATTGAAGattgattttt
gattcatttGTACATCTGAAGAAACTTCAAAATACACCTTGATCAATAAC
AAAAAACACCAGCAAACAAAACCACTATAAATATGTTAGATGCAGACGTA
TATCAACACTATATCAGGACACGCTAGATCATCGACAACTTGCACTCGTT
TGGTTTAACAACAAACCAACATGAAGTTGATCATCGTCTTAGCTGCTTGC
TTAGCATGTACTTTTGCAGtcAACCCATTGGatcaagctaaaaagTGTTT
GTCTGAGCACAATGCATGCATCAAGAAATTGGAAAGCCAAGGAGTGGACT
TCTTCCAATCTCGATCGAGATGTGGTGCATGGTTCATTAAATGTGGTATG
GAACCTGGATGTATCGAAAAGTGCAACAAGTCAGCGTTAGCTTGCTTACA
AAAGGATGTTAAAAGTACCATCTGTTTGGAAGACGGGGGTAAATGCTACA
TGAAATGTAAAGCCTACACCAAGTAAACTAACCATCTTtaattattattg
tttttatgaaataatatataataaatttttaaacTCTCTGAAATATCGAC
TTGTTTTTATTTCTCGGTTAAATCCAAGTTTCATTTTCAAGAGGAAACAA
GGACAAAAATTTATTCCCTCTGTGCGGCACAGAAGCTCTGTCCTCTCCAC
CATTTATCTCAGAGAGTGTAAAACGGGCCTTCCTATCTTGAATTCCTTA
Run BLAST on NCBI

protein sequence of TCONS_00065355-protein

>TCONS_00065355-protein ID=TCONS_00065355-protein|Name=TCONS_00065355-protein|organism=Clytia hemisphaerica|type=polypeptide|length=101bp
MKLIIVLAACLACTFAVNPLDQAKKCLSEHNACIKKLESQGVDFFQSRSR
CGAWFIKCGMEPGCIEKCNKSALACLQKDVKSTICLEDGGKCYMKCKAYT
K
Run BLAST on NCBI

transcript from alignment at scaffold_439:287355..309280+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065355 ID=TCONS_00065355|Name=TCONS_00065355|organism=Clytia hemisphaerica|type=transcript|length=21926bp|location=Sequence derived from alignment at scaffold_439:287355..309280+ (Clytia hemisphaerica)
CTTTGATACTTTGATCGCTTAAACCGCTTTCGGAAGACACGTTAATCGTA
CAGTCAGACAGGCGTAAGAAAGagtaaaattgttatttttctgTTACTTA
ACGTATAGAGATACTAATCTGTGAACACTTTGTCTAAACTCAAATGATGT
GGTCTACACTGTcggttttttttattatattattcGCTCACAATAATTTT
ATGTCTTGCCCTTATCTTACAACGAAAAGGTAAAGAATAGATTTctttcc
cgaaaaaaatttaCTGCGATGCGCAGCTATCCAAATTATCTTTGCTGAAA
AATAGCTTGTATAAAATTACCCGTGGCGCTCGGATGTGTAGAGGCTAGTG
TGATACCTTCTTTGCTTGTCAGGAACATATTTTTGTATGTAAAATCACTT
CAAATGCCCCACAAAAAGCATAAATATTCAATCATTCACTGATAATCTGT
AGGGTTTGTATCTCAGCAAGCTAACTTTAACGTCGTCATCAAGTCATTTG
ATTCCccaaattttcttaaattgttgTAACTTATTTCTCTAGGAAACTGT
TCCAAACTTACTTCAGAAAATACGTTAGAATCATCTCATAATGTGTTGGT
GTCATTATTATGAAATTCGGATGCTGTAATTGTCAATGGTTTTGTCATCT
ACTTATCACATTATGAAAACAGAGGTATATGCTTGTGTTTGTAAATTGCA
TTAAAAAAACTCTAATTCAATTAGCATGATTGCACAAACAAACTTATATC
TTGTAACTTGAAGCCTTTATATTAGATAATTCTGCACTAACTTGTACATG
TACCCTCGTCGCTCAAACCGCCAGTTATTTTTACTAGTTGGCTAGAAATT
TTACCaaattagaaaatatttgaTCGACATTTACAATGCTAATAAATCAG
AATAAATGTTCTTTTGAAAAGCGATGTTCATTAAAAATCGAATGGATTGT
GTCAGAGTTTGGTAAGAAAGAGTCAAAATGTTAGGGTTAAAAGGTTGAAA
TACGTATACGTAGATGTCTGAATCTGCGAACAATGTAATGCAATGCCCTC
TAATATTTAACGCAAATCGAACCTGGCAAACCGGAATTGACCTTCCTTTA
ATTATATGCGTTTGGCAACAACTTTTCTCCCACATGAATACTGAACCTTC
TCTTAATCCGTCCCTGCAAGGGACCAAAGGTCCAGAAAGGCTGAAGAGTA
CTGAAGAGGCTTCAGTGATGTTTTGATGGATGcacattttcataaaattt
ttatcaaaattaattcGCTTTAGTCTTTTTTTAGCCGCCTCTTTTATAGC
CCCTCCGTTGGCCCCGCTGTATAAACTCCGTatagaaatatgaaaaacat
gaaatatcATACCTTGCGCGCCATTTTGTGGCGtgattccaaaaaacatt
ttcgCCACCATACACAAAATTATTGATTAGCCTTTTAACCATATGTTCAT
TTGCCTGCCATTTAAACAACTCCTAGTGCATCAAGACCGTAAACAAATTC
TCCACGAATTTCTTCCACTCTCCAAGAGGAAATAACACACGTTTTGATAC
CAAGATTTATATCAGTAGAGTGTCAATACCTTTTTCTTGATCTTAACAAA
TGATAAAAATCATTTCTTTTTgacttatacttttttttattcctCGCAAG
CGCATAGAGCAACTTTACAATATTATTCTAATCttccaattaaaaaaaat
tgttgcttCAAACAATGAACTTTAAGAAACCTCTCCTTTTTTGTCAAAAT
CTCTGATAAGAACATCTTATATTTTGACATGACTTAACTTTGGCCAAAAA
CTCGTTCAtaaaaattgcaattttggTACTCCGGGTTTTGACTATTCCGT
ATAAATGCAGTCGAGTCTTATATTAAACCCATGTGTCagaaatttgaacc
aaagaacACTTATTTTGCATTGGATTACTGGATTGGAGCTGCTTGCATTT
TCTCATGATCAAGATTTATCATCTATATTACCAAACAAGCGCTATACTGC
AAAATATTcttatcaaaaacattttggTTTNCCATCTATATTATCAAAAA
AGCGCTATACtgcaaaatattcttataaaaaacattttggtTTATAATAA
GATGTTCATTTATGAATGGAGACAACGGTTAATACGTTTGATTTCTGACA
GCATGCACATCATTGGACAGAAAATACATCCATTACAAGTTAATCAGCCT
TTTTTAAACAGTGCCTTTATCTAAAGGCATTTTTTTAAAGCTGGGGTGGC
TTTTTAATCAGGTTTCGGAGGATTCCAGGGCGTGTAAAGCTCCTTGTGGG
GATAGTTTCCTAAAAGAACACCATACGTAGTAATATATAATATTCAACTC
TTAACTATATCCCTATTTGATCTATTCACAATATTTGGTATGTCTCAACA
CATACGGGATAATAAAATTGATAATACTTTGTTTTCAGAGCTTCCATTTG
GGAATTCCTGTAACGTGTCTAACTCACAGAACCACGTTGCAATAGTTCAA
CCCAACTTTAGTTCAAAATAACCCCCTAATCTTAGAATGATTACTTATAT
ACTTATATTTTAgcctttttgacattttttaaaattgacattttaggttt
ttgaacataactcTTGAACCATTgatgtaaaatcaaaaagcaATACAcga
aattttaagttaggctttcctctgaatgattccgaaacaatctttgaaaa
atcttcctGCTTCTGCCtataatatcaaatcaaagagggtaacttatttg
tggcacacccggtataaaCGTAAGCTTCTAGGCAATCGAAATATCCAACA
TTTCCAATAACTCACATTCCACGCATACTCATGTGAAAGAACCCCCTGAA
AGATTGacacaatttttcattttttgattgaactactgtttttatttttt
cctattttcataGAGAATGCTGTGCTGGAATGATAATTAAATCAAGATCA
TGCTAATTTTAAACTGCGAGTATTTTgaatttctctctttaaaagcaaaa
atattccattttcattgcTTTTTTTACCAAGATTTGCGCTAAGTTTTGAT
GCGAATCTCTAAATGAAATATCAATTAAAAAGTGACCCTGTCGCAAAATC
ACCAGTTTTGCTCAGTGAGCTCGTTGTGCAACTATGAAGGTCTTAAAAGA
CCTCcttgaattgatttttgtaTAATCGTTGTGTGATAACTTTCCTTTCT
CGTAGTAACCAGTTCCATTAAGGTCGGTTTCAAACACCCCGCATCACTGA
TCTGTATGAAAACCCTTCCACTTGAAAGATTGCATTCCTTTTTTTATCCA
AACATGGGGGTAAACGAACATTTCCAGGCCCTAAGGAGTGTAAAAAGTTC
TTCTTTTGAGAATCTCAGCTGGATCTGCCCTGAGCTAAGTAAAATTCCAA
CAGAAATAGAGATGAATTTGCTAAATTTCGCACCGAGGCACTGAGACAGT
GGTGTGTTTTGTAAAATGATTAATTGGAAAATGTTTATCAAGTCAATAAC
CTTGTGTCTCCAGCTAAAAAGTCTTTCAATGTCACAACATCGCCAAAACC
AAAAACTCGAACTTGTTGTAACCTTCTCTATAAAAAAGTCCACCCTAATA
ACGGGTGTTACGGACTTAATTGTGTTGTTTTGGCAATTAACGCGAAGTTA
ATTGACTGGAGAATTGACTTATTGTTTTAATGTTCTTTTGTATTTCCCTT
TTCGTATAATTTTTATGACCTCTAGGGAATTTCGTGTTTTCGATAAAATG
TAATGTAATTTTCTTGAACTTTGagcaatcaaaaaatataactgttttgA
ACTGTGATGTACACAGACGCTTGAggggggggttttcacttttacggtat
gacggtattgggcctttttacccccggtaaatcggtattacgagaaaaaa
acgacgggattacggtatttcattttctaccggtatcggtaaattgcctg
tttttttgtcggtatatcgatatttttatcaataaaaacggtatttcggt
ataaaactatttaccttttagtttcttcatgagtttcatgcagaaagatt
ttcaaaaaagataagtctattccgctatcttaaccagtaaaattttcttg
ctcgcttcgctcgcacaatcttcGATGTTctattgacttattgtcatggt
gaggttattcaaaataagcaaaactttacgatatctaaacaaatattttc
gttatttttctacgggcgcattttttaatgacaacttttaNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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ttggctaacaatagcgtaataaggccgtttttcaataacaaaggagagcg
aaaattgtcgaaaaattttcgcgctcgcttcgctcgcctTCTTATTTTCC
AGTTATTTTCTTACCTCTGCTGATAGGGGGGGTTGAACTTTAGAGTTCGC
GTCCTTTAGTTGCCCCACAGCACTACCAGTATGgagcctgtgttgaagtc
tacggcttctcagaccatgattggccaAAACCTCGATTTTataaattaat
tctcaatataaaagacatcttacgggtctgcgaggaagaaattattgggg
gaaaggcttaattttgcatttgcctcccgtaacaagcaagtaactttggc
gtGGCAGACCtaaatattgctttatgaaagctcaaatagctgtaaaagag
gccttaaaaagtcgacgatatcgagaataaggtcacaaacctaccaaaaa
actttatatattggcgaAAAGGTTGAATTTaccccaataaggtcacaatc
gtttaaccaaagatgtaaaagcaaaatcggtgcgtgaatacctgaattga
gggttgactggggggcctcataaagttgtacagtttctaatttgttacta
cacaatagatttgataactgaaaattcattattttcgaaaaaaaacataa
atataatatcggtatcggtaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNATAACTGTTTTGAACTGTGATGTACACAGACGCTTGACTGCATTTT
CTTGTGTGAGAAGTTTGCTGTTTTGGTCAACGTAACAAGTGGTATTTTTG
CTCCATTGACAAACGGGATCCCAAAGAATGGAAAATATCAACTTCCTACG
AAACGTTGCTTCGACTTAACGTCCGTAACGACCAAATAATAGtgagtttt
tgtatttttgaggacgatggagtgactgaagcgatttggaataacccgta
GCTCTGACCCGAAGACAGGATTTAGATAAATGAGAAGCTAACCGTCCCGC
CATACATAAACTAGCAAATGTGTTTGAATGCTACAACAACGTCTAATTGA
GTTGTTGTTCCTTACACCTACCTCTGCAACAGTTGGAACTTCTTGTGTCA
TTGTTGGTCAATCTCCTTGCAAACTCTTGATATGTCTCTTGTGAATGTTT
CTAATATTATTCACACATCCTATCCAGCAACAAACAATCctggtcataat
atttgagaaaaaagggaaattcccacgaaatcgtatagccacaaacgatt
tggaagcgctctaacttaaGTCAGAAGGGTATagtttaactctgagtttt
caCATGAGACTTTTCTAACTttcgaccttaggatctgaggatccaaaagN
TTCAcatgagacttaaaactttcgaccttaggatctgaggatctgaggat
ccaaagaGTTCCagaatagtccaataaggctcagaatatagcctggaact
CTATAAACCCcactcaaattgaaatatttgattaaatttaacaaatagcc
caaaagcgactttctcgcccgaactttagaATGCTAAAAGcaaggaatta
accaaaattctcaatatattttgaccgatatTGTAGATGTATTTTACATG
ACTTCACCGGTAACGTTCTGGTCCCATCCTTACAACAAACAGgttcaaaa
tattgaattaaaaactaattaattactatgtttttcagtttttaagtttt
tccaaATAATGTAAACATCAACGCGATACTGTATAGCGGTTTGTACTTTC
ACATGTCGCTTATTCTCATTTTTCCTTCAACGGACTGTCTGTCTGTTATT
GTCGACCTTCTTTTTCTGATTCTGGGAGAcaagaaaatgaagaataagTA
AAAAGACAAGCTAAAAAGAGAATACTTTCGTTAATAATTCAGCCTTTATG
TATTCTCTTAGGTGATAAGTTTTCCCTATGAGTACTATTTATGTTTTCTT
GATTCTATCTTTCTTcgttgtacacgtttttttataagaacaaaatatat
aagaacataaaggcttcgatggacaaaatatttggaacaagttaagaaaa
ttttaaggccttatggactcaaaaacaccaaatttcttaagaaaatagac
aaaattactcaaaaaatagcgaaaataagaacattttaggcctATCAAAA
AGcttagaacatccgaaggcttcaaaatttaggatgttcttataaaaaaa
aacgtgtatctttcAAACTGAaagtcaaagattttgcttcTCGTGAGAAA
AGAGCAACGACGTTTCAAGATTTCTTTGAAAGCCTTGGAAGCTACTCGCt
ggatacacgcttttttaataagaatattcatgatgatattggccgaaaaa
ttaactatattttggccatttttatccttgatgatatgaaaaaaatatga
aaaaaaaacattctcataaaaaaagcgtgtatattcTCTCAGGAACAAAA
TCGATCATTTGTCTTCTTATttattaccgtattacttcgaataaacgccc
ccatcttttaaacgccccctcgaataaacgcccctcctaaaaggaaaatt
atttattaaacgccccctcaaatagacgCCCCCTTCTAATGAACGCCCCC
TCtaggggaggggcgtttattagtaacttgtgactttaatacttcaatac
CAGTGTTGATTGGGCTTGGAAAggaaaattttagtcatttcttgtagCCA
GAGCAGTTTTCCATGCAATTTTAGTCGttgaaacaaagaaattttgcact
agccactaaaatcctgataaagaactaaaacaaagggtatatttgctcta
aatattcgactttagtctaaaataatttaataaacgcccccttcttttaa
acgcctccctcgaataaacgcccctccaaaaatcgaaaaaattaaataaa
ggcCCAATAAACGCCccaggcgtttattcgaagtaatacggtatccGTTA
TCAAAACTGTGGAACAAACCCCGGGGGTTACTACTACCCTCACCGACCGA
TGGGGGTTATCTACTGACATTCGAAAAACGGATCCTATTTAGGACGGAAT
TGCAGAAAAAAGTAACCCtcaatgggactgaaattccaaaacttTCTCAT
ATTCTTACACCTTCTCCCAAATTGAAATTCCTCCTAAAaggtaccctacg
agggactgttTTTGCGAACTTGCCTGGGACTCATGAAGGTggaaaaaggt
accctaaaagCGGCGCATCTTCGTACCCCTTTTTGCCAATATACCCACAC
CGGGGAACAAACAAGAGACCAGCCCCCAGACCTTGTTGGTGAAAATTTAT
AGATTCCAATTGTCTAACTTCAAAAAGGTTTGGCTGAAGAGCCATTGCTT
TTTCTGAGGTTCTACCGAGATACCACTTTGTTTGGAGGTTCTACCGAGAC
TTGTTTGTACCAGGCTTTTTGTGTGTGGCCTGGGGTGAGACGTGCTCTTC
TCGAGTCTCTCACCAATTGAGTCATAGGAACAAGGAATAAAGATATCGAT
ACATATTTGAATACATTTCTGCTTGTGGTTGCAAGTTTTGTTAGAAGTGT
GTTCATATGGTTTTTCCCAATGACAAGTAGATCAATTGGGCTGATAACTA
TTTCATAAGTTTTAAAGTATTTGATGATACTGTATCGTGTTTCATTTAGA
AATGTCGGGTCAATCGTggtcttttttcaaactttaaaggattagaagga
gttagaagttttttcatagctcgttggatagcttagagtcccctctttct
tttgggcgtcttcagcgccgcccgatttaggaaaaGCGGGTTGGGCAGCG
GCTAAAGGGGGGGGATAGGTTAGggctcgggtaacttaatgcatgtccca
aaaatgcattaatttttccgccccagttccagtccctaaaccataacaaa
ttatacatttttggaagcgtatNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNaaatttgctgatgtcagcattttatcgcaaaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggttttcttaagatatct
ctaattatactgtgaaagaatttaagttacaccgaatacggtattctaca
tccaaatacgcttccaaaaatgtatagtttgttatggtttagggactgga
actggggcggaaaaattaatgcaattctgggacatgcattaagttacccg
agggGAATTCTAGCAGGTCTGATGACGGAAAGGTACCcatggtaaaactt
caaatcaattcgcaagaggacagaataaagtataacagggccaaatttgg
aggttcttggatcactcgttcaccaaaaatggtcaaagatTACCATCTGC
TTCCCTCACACTTTTTAAGAAAGTATTTACCATAGATATGCCGTGCAAGC
CGAAATGCTGAGGTATTGGATTGAATTTAGTTCAAATTACAGTCGACCTA
TGACGGAGTATCACAGTCTAATGGCCAATTGTCTGTATATATTCTTGCTG
TAAATAACAGAGAACCAATATTTACggaattcaaaatttcaaagatattG
CCGTACTACTACACTACGTTAAACATGTTAAACACCCCTACGTCACAGAC
CCGTTGAGACCCCCGACCCACTGGAGAAtgtggccaaaatttcgtcgcCG
TTGGGCAAAATACGCTaaaatttcagtcccacgcTAAAGTTTCATTTCAT
CCGCaatcgaaattcaatgtaaGAAAGAAAAACCATCGGACTGAATTTTG
AACGTTATAAAAGTTCCGCCGGGGCTATGACATAACACAGGACTGTCAAG
AAAGTTGcgtaaattgtaaaatgttgaataatattTGTTTATCTTGTTAC
CTTAGCAATATCGAAAtattaattttaaaaacacCCCTCACTCACAGACC
CGTTAGGATTTCAGCctgtggggataaaaataagaataagagacagggga
ttgatattccaataacttttatggctggggatttcaattcttttcaagtc
agaaaattcatggggatggaaaaaatatcataatattttgcagtgaggat
tggtttatttgattatgtATTATCAGTGGGTACAAAGATTTTCCACCGGA
GACgatattttgaataattaagGTCTGTGTTTTAAACGATCTTTAATTTA
AATTATCTGAAATTATTATTGGAAGGTTAGCCCGGGAGGAACTCATAAGG
TCCGACCCATGACATGTGCCGCCGTCAAGGATGGGTTTTTCAAGACACTC
GAAATACACTgaaagggtgtacttttgatagagtgcactatGAGGGTCTC
TTTTTAGATGGATGCattgtaagggtgtgttttcgGACAATGATACATCG
ATATTAATTGATAATGGGGTGATAATGTCTTGCTGAATTGGAAGTCTGAC
AGGAAAATTCTGCACCTATTTCACATGTTCGATTTACACATCGTGTGGGG
TCGGGTGGTTTCAGCAAAATTAGACATGAAATCAACCCACCCCCCACCCC
ACCCCCCTCCCTTGGAAGGTTACAGTATACACTATACTCAAGTTGAAGTT
CATTCTTTTCAACAGCTTTACAAgcgaagaaaaaatttcaaatttcagat
ttaaaaaggtttggctTTAGAGCCATTTTTTATTACAATTCGACAATTCT
ATTTCAAGGACCCGGGCATGTATTGTGTTTATTTGGCGTTTTGTAGCCTG
GCGGGTGAGAGGTTCTTTGACTCTCTCACCACGGTACCAGACTAGTATCA
AATCTTAAACGCACTGATTCATATTTGATCACAGATTTACTTGTGGTTTG
ATGCTATATGCGTAAGGTTTTTCTCATTTACAGCTTAAAAGCTGACACAA
ATCTATTTGGCTATTGTGACACAGTATTATATTACTATATGCAGTAACGA
GCACCGGATCGTATTCGATTATAAACACAAAATCTAAAAAGGAAAAGTGT
AGAATTTTCACGGTggtcccccgggggggggggttacttaggcaaatgga
gggtacggtatgagccgcccttaagggtaccttttatggatttccaaagt
cccgctaagggtcggaaaaatcagaaaatcaaatttcagtcccaataagg
gtcgtaaaattcacaaaatctttctttgtttactcctttttagtcccggt
aagggtccaaggtTCGAAAGTCGGGCAGTACCCTCCCCCCGGGACTGTAG
CCTATGTGATACACGttattttaataagaacatccaaattttttgaagct
ttcagatgttcttaacttttttagctttaagcctaaaaatgttcatgaca
tgtttttattttcgccattttttgagtatttttgtccattttcctaagaa
attgggtgttttagagtccgcgcagccttaaaatgttcttaacttgttct
taacattttggccaccgtagccttatgctcttatatagtttgtttttata
aatatacgTGTACACTCATTTTTAAAAACGTCGAACGTCTTCACTGCAAA
TTTActaaatgaagatcttgtagaaaagtgctataactttcattttcact
ggagagattctttgatcttaggaggtcatcactgtgaagaaatttctcaa
aaacatttattcaatataaaagtTATGatgcaaagttaataagtgattga
ccccaaaaaacagcagaaaacagcatttttagacgtcaatcagcttataa
ctttgtttgatcagagatttgggaaaagaggataagaatcgccgctgccg
ctcgctgttttctcaTTGTTGATCATTGAATTCGGCGTCGTCTGAAGTCG
CTAGGCTAGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGCGCAGATa
tttcaatagaacaaaaggttCCCTAGCCTATATTTCTATAGCTGAATAGC
gcaattcttatcctcttttcccaaatctctggtttgatattttttgactg
aatgattatttttgaaatattttttcacagttttttcgataatcaaggaa
tctctccagtgaaaatgatagctatagcacttttctacattgtcttcatt
tttttcttcttcattttcattttcatttttagaatatttttaatgaattt
tttatttcaaatatgttccactcactaatatctttccaatgatacataat
ttataaagattgaagaaatccttcaaaaattataggtaaaagaaaaaaga
gtgcacacttatcgtgaatagattTTAGTCCCCTACTTTCAGACCTGATC
TGCTAGTCTTGTTAATACTTGTATTACAATTACAAACTTGGGTTCtgaga
atttcaaatttaaGTAAAGTCTATGGTAGATATCTTGAACTTTTGGACCC
TTTCAGAAACTCAATTGCTAATTTATGTTTTTACTCCTTCGAGAGATTTT
CGAGGGCGTGTAAAGAGAGACCCTAATGGCTCCCCAACATCTTTCCGTAG
AACCCCCTTCCCGGGCCCACTCAAATTCGTCAGCTGGGTCAAGTTTAAAC
TACAAACTTTTAAAACTAGTTTGGATGATAAAACTATTGAAATAAGAAAC
AAtctcaaaaattcatttgtTTACCTTAAtgttttgatattcaatgtccg
ctaattggagagggAAAATAAGGGTTCTGGCTGTTTTATGCAAAAAGATT
TGTCTACAAATttgagggtccgctaattgagtatCCGCCTATTGGAAACT
TTTGTATGCGGATTTGACTAGGAATAAATGAGATTGTCCACTTATCAGAG
ATGTCTGCCttccttttagagtgtccgttaattggaggtttCAGTGTACt
ttaaaatttgcgaaaattgtaaaatgttgaataatattttatttgtcGTG
TTAACTCAgcaatgaaaatattcaaatattgatacttgtaAGTTATTGGA
AGTTCTTTTTGGTTTAGTTTGGTAGTAAGGGTTAAAATTGCACTTTATTC
CAGTTACGCAATACACTTTTATTATAAgcacaaactatataagaacataa
ggcttcaatggccaaaatactaagaacaagttaagaacatttcaaggctt
cgcggactcaaaacaaccgatttcttaggaaaatggacaaaaaatactca
aatgttaagaacatttttaggcttaaaactcaaaaagttaagaacatcca
aaggcttcaaaNtaggaaaatggacaaaaaatactcaaatgttaagaaca
tttttaggcttaaaactcaaaaagttaagaacatccaaaggcttcaaaaa
ttttggatgttcttataaaaaaacgtgtacacgttGTTTTCTTATTAGAA
CGTCTTAATTTTGGGCTGAACCTGAATATGCTTATtgttttgacaatttt
gagcctcaaatgTTCTCATTAGCCTTCTTGAAATTAATTCACTTAAATCT
ACAGAATTACCTAAAGTTAAGAGGTCTGCAATTCGGACTAagtaaaagta
aattttttcctAGTTTAAGTGAAACTTTGACTAATTCCCCTGGGCTAGCC
TAATCCGACAGGTACTTTTCCGAGCGATGTCGCTCCCAGTTCGACTTCTG
GAAGGATGTGCTATTTCTTGATTGGCTACATAAATGGTCTGTGATGGCTT
GCTGTTGGTGCATCTTGGTGGTGTAGATTTTACGCACTGAGCGTCTGACA
CGGTTACTAAAGTAGTGTGACTTTTCACACTGTTACATAAATTgcttttg
tttgtcaaaatatttattcaactGAATAActctaaagaaaatattttttt
taattttgaaaatttcagtaAAATTGAAGAGACAACGCACAAGACGTGAT
GGTTACATTGAAGattgatttttgattcatttGTACATCTGAAGAAACTT
CAAAATACACCTTGATCAATAACAAAAAACACCAGCAAACAAAACCACTA
TAAATATGTTAGATGCAGACGTATATCAACACTATATCAGGACACGCTAG
ATCATCGACAACTTGCACTCGTTTGGTTTAACAACAAACCAACATGAAGT
TGATCATCGTCTTAGCTGCTTGCTTAGCATGTACTTTTGCAGGTTTGtaa
tatcaaaaaaaattttagtacaGTATACATTTttaactatataagaacat
aaggcttcgatagccaaaatattaagaacaagttaagaacatatttaGGC
TTAATTCTCAAAGAGTTAAGAACAAccggaggcttcaaaaattttgggtg
TTCTTATATAATAATAGTGTAATTGTTAAGGATACGTGCTGTTGATTCTA
ATTCAAGCATTCATACACACTCACCGTGTTACTTGCTTGGTCGGACCCCG
TACTTACTGGGATAATAGACCCAAAAGTCGTTCACTGTGGGAGCTCATCA
TTACtgttaaagaaatcaaaagcCGTTTGGCCATTTAGTAGCTTTCCCTA
CTGACGTTAGAGAGCTGAAACAAGGTTCAAAATCAAACTACTGgcaacaa
aagttttcttccCCGTATATTTAGGTCTAGAAATTTTTCATCGAATCAGT
GAGATATTTGTGTGTATACAGTGCTGTGGTGTTCAACAGAGAGAAAACTT
ACCCTACTTATTTGGAAATTCAACAGCTCTGAGAcctgttttttatttat
ttctgttttacttttttagtcAACCCATTGGatcaagctaaaaaggttag
TATTTAACTTTCAATTACCAACAATCAACCTTTCCACTAAAAGGATTTAG
CAGGGCAAAACTTTGTCAAATCACTTAAGTCATTACATATATTGTAAACA
AACCAGATATCTTTTGGGcgttcaaaattcattgccgaaATTTATTGTGC
TATGTTACGATAAATGCTAAATTCCCCCTGGTACAGCATATACGTAGACC
AGCTCATAGATATTTGACgttttgaaaactcaatatTAATGCTAGAAGAC
TTATTCTAGAACGAAGtgggtataaaaagaaaaactagaGGACAAAAATG
CAGTCTAGTTTATAAAATCTCATATTATTCCGTAATACCCATTGTGACAA
CTTTTCTGTGCAACTTTTCTGTCTGTAGAAGGAAGTCCGTGCAgttgaga
tttttcattaagGTTTTCGTCCCAATTGTAACCCTTGGAAGAACGAAATT
TCTTGAATTGTTTTTTAACTTTCCGCCCAGATTAACCAAAAGGTGGTTGC
AACACTTAATATCTATATTATTAttgtacacccccttctcacagacgcgg
taggatttttcagccagCGGGGATAAATAGGGAATATTCTCATATTCTTT
ATCACTGGGGATTAcgattcttttgtttgaaagacaggaaattcagtggg
gatgggaaaaatagcatgatattttgcaatgaggattgatttatttgatt
attttcagtggggacgaacattggagtataattttccaccgggaacGATA
ATTGGGAAGGGGTACCAgtgggtctgcgagaagggggtgttattgTATAA
CACCCTTCCCCCCTGGATAcctgaattttaaaaaagttatttttgttttc
aacatATTTAGTGTTTGTCTGAGCACAATGCATGCATCAAGAAATTGGAA
AGCCAAGGAGTGGACTTCTTCCAATCTCGATCGAGATGTGGTGCATGGTT
CATTAAATGTGGTATGGAACCTGGATGTATCGAAAAGGTAAGGAAGGTTT
GCTCGAAAGCTCAAGATTGTTTTTACGTTTAGGCTGGAATTCCGCCTAAT
TTCTCCTATAAGAAATGTGTGTAAATGTAAGTTAGAAAGGTACAATCTCT
ACCACTAATTACTTGACACAAACAAATCACTGCTATTAAACTGTTGGAAC
CATATTTCTATGAAGTTAGGCCTGTCTAATATAAATTAATGACCGAATTT
CAATCCTATTATGTTgaaattttccgacccttggTGGGACTGTGGTTTAA
TTTGACCCTCACAGGGACTTCCAGAATCCAAAAAAGGACCCTTAAGGACG
GCACATACCCTTAACCTTCACTTACCTGAGCCCCCTACCGGTTACCACCA
AGCTGGTAAAGAAAgcaaatattttatcaattgtgtttttgtatattttc
agTGCAACAAGTCAGCGTTAGCTTGCTTACAAAAGGATGTTAAAAGTACC
ATCTGTTTGGAAGACGGGGGTAAATGCTACATGAAATGTAAAGCCTACAC
CAAGTAAACTAACCATCTTtaattattattgtttttatgaaataatATAA
CAAATTTTTAAACTCTCTGAAATATCGACTTGTTTTTATTTCTCGGTTAA
ATCCAAGTTTCATTTTCAAGAGGAAACAAGGACAAAAATTTATTCCCTCT
GTGCGGCACAGAGGCTCTGTCCTCTCCACCATTTATCTCAGAGAGTGTAA
AACGGGCCTTCCTATCTTGAATTCCTTAAAAACTTTCCAACAAAACTGTC
ATTAATTTTTCGACGTAACAGTTTATGAAGTTCTGGTTGTGATAAAATGT
AGATAAATGCATCTAACATCCAACCAATAGCATAGGAAGCTGTCACAACC
AGACCAACGATATAGCTTACCATTTCATTAGCATTGGCAATATAAACCCA
CAGTACGGTTTGATCTGGtataatgataaaaataatgAAGGAAATCACCA
AAAGTGAAGGCGTATAAAAGCCTTTCCTCAAATCTCGTAATTTCTGTAAT
AGGTTTTTTCGTTCAGGGCTACCGCTAGAGTCgccatttttattttgaaa
tgatgtaatctttcgcttattttcttgtattttcttgAAGAAATAAATAT
ACGTCAATGTAACCAGGATTAAGTAAGGGAACTCGCATACCGGCCATAGA
TAAACTAGTATCCGAACAGCTTTCTTCTCTTCCCCATTATAAGTGATTGT
TGGGATGAATATCACCCAAGCCAATATCCAAACCAAAACTGAGGCTAGTT
TTGCTTTGCGCATGCTCCAATACAGACTATATTTGATGTTCaaataaaca
gataaaaatcGATCGACCGTGATTAAAGTCATTGCTCCAAAGTACACAAT
ATNTTGttcattgggtaaatatctgggggtctacaattgggcctatgaat
aatttgaagccactgaagttgagcccagtgcgttgcgcacgttcgactat
ttttaCGTTTAGGCTGGAATTCCGTCCAAATTTCTCCTATAAGAAATGTG
TGTAAATGTAAGTTAGAAAGGTACAATCTCTACCACTAATTACTTGACAC
AAGCAAATCACTGCTATTAAACTGTTGGAaccatatttctaaaaagttcg
gCCTGTctaatattattattatacagtaTACAAGTTCACAGNCAAGAGAT
GGAAGCTTGAGTCTTTGTAAACGCTCCTCATAGTGGAGATTACGATACTG
CGGAATCAGTCTTGTTGCCCGTCTTTGGACCCCTTCAATCAGATTAATAT
AAATTAATGACCGAATTTCAATCCTATTATGTTgaaattttccgaccctt
ggTGGGACTGTGGTTTAATTTGACCCTCACAGGGACTTCCAGAATCCAAA
AAAGGACCCTTAAGGACGGCACATACCCTTAACCTTCACTTACCTGGGCC
CCCTACCGGTTACCACCAAGCTGGTAAAGAAAgcaaatattttatcaatt
gtgtttttgtatattttcagTGCAACAAGTCAGCGTTAGCTTGCTTACAA
AAGGATGTTAAAAGTACCATCTGTTTGGAAGACGGGGGTAAATGCTACAT
GAAATGTAAAGCCTACACCAAGTAAACTAACCATCTTtaattattattgt
ttttatgaaataatATAACAAATTTTTAAACTCTCTGAAATATCGACTTG
TTTTTATTTCTCGGTTAAATCCAAGTTTCATTTTCAAGAGGAAACAAGGA
CAAAAATTTATTCCCTCTGTGCGGCACAGAGGCTCTGTCCTCTCCACCAT
TTATCTCAGAGAGTGTAAAACGGGCCTTCCTATCTTGAATTCCTTAAAAA
CTTTCCAACAAAACTGTCATTAATTTTTCGACGTAACAGTTTATGAAGTT
CTGGTTGTGATAAAATGTAGATAAATGCATCTAACATCCAACCAATAGCA
TAGGAAGCTGTCACAACCAGACCAACGATATAGCTTACCATTTCATTAGC
ATTGGCAATATAAACCCACAGTACGGTTTGATCTGGtataatgataaaaa
taatgAAGGAAATCACCAAAAGTGAAGGCGTATAAAAGCCTTTCCTCAAA
TCTCGTAATTTCTGTAATAGGTTTTTTCGTTCAGGGCTACCGCTAGAGTC
gccatttttattttgaaatgatgtaatctttcgcttattttcttgtattt
tcttgAAGAAATAAATATACGTCAATGTAACCAGGATTAAGTAAGGGAAC
TCGCATACCGGCCATAGATAGACTAGTATCCGAACAGCTTTCTTCTCTTC
CCCATTATAAGTGATTGTTGGGATGAATATCACCCAAGCCAATATCCAAA
CCAAAACTGAGGCTAGCTTTGCTTTGCGCATGCTCCAATACAGACTATAT
TGNTGGAAGACGGGGGTAAATGCTACATGAAATGTAAAGCCTACACCAAG
TAAACTAACCATCTTtaattattattgtttttatgaaataatatataata
aatttttaaacTCTCTGAAATATCGACTTGTTTTTATTTCTCGGTTAAAT
CCAAGTTTCATTTTCAAGAGGAAACAAGGACAAAAATTTATTCCCTCTGT
GCGGCACAGAAGCTCTGTCCTCTCCACCATTTATCTCAGAGAGTGTAAAA
CGGGCCTTCCTATCTTGAATTCCTTA

Coding sequence (CDS) from alignment at scaffold_439:287355..309280+

>TCONS_00065355 ID=TCONS_00065355|Name=TCONS_00065355|organism=Clytia hemisphaerica|type=CDS|length=1530bp|location=Sequence derived from alignment at scaffold_439:287355..309280+ (Clytia hemisphaerica)
ATGAAGTTGATCATCGTCTTAGCTGCTTGCTTAGCATGTACTTTTGCAGt
cAACCCATTGGatcaagctaaaaagTGTTTGTCTGAGCACAATGCATGCA
TCAAGAAATTGGAAAGCCAAGGAGTGGACTTCTTCCAATCTCGATCGAGA
TGTGGTGCATGGTTCATTAAATGTGGTATGGAACCTGGATGTATCGAAAA
GTGCAACAAGTCAGCGTTAGCTTGCTTACAAAAGGATGTTAAAAGTACCA
TCTGTTTGGAAGACGGGGGTAAATGCTACATGAAATGTAAAGCCTACACC
AAGTAAATGAAGTTGATCATCGTCTTAGCTGCTTGCTTAGCATGTACTTT
TGCAGtcAACCCATTGGatcaagctaaaaagTGTTTGTCTGAGCACAATG
CATGCATCAAGAAATTGGAAAGCCAAGGAGTGGACTTCTTCCAATCTCGA
TCGAGATGTGGTGCATGGTTCATTAAATGTGGTATGGAACCTGGATGTAT
CGAAAAGTGCAACAAGTCAGCGTTAGCTTGCTTACAAAAGGATGTTAAAA
GTACCATCTGTTTGGAAGACGGGGGTAAATGCTACATGAAATGTAAAGCC
TACACCAAGTAAATGAAGTTGATCATCGTCTTAGCTGCTTGCTTAGCATG
TACTTTTGCAGtcAACCCATTGGatcaagctaaaaagTGTTTGTCTGAGC
ACAATGCATGCATCAAGAAATTGGAAAGCCAAGGAGTGGACTTCTTCCAA
TCTCGATCGAGATGTGGTGCATGGTTCATTAAATGTGGTATGGAACCTGG
ATGTATCGAAAAGTGCAACAAGTCAGCGTTAGCTTGCTTACAAAAGGATG
TTAAAAGTACCATCTGTTTGGAAGACGGGGGTAAATGCTACATGAAATGT
AAAGCCTACACCAAGTAAATGAAGTTGATCATCGTCTTAGCTGCTTGCTT
AGCATGTACTTTTGCAGtcAACCCATTGGatcaagctaaaaagTGTTTGT
CTGAGCACAATGCATGCATCAAGAAATTGGAAAGCCAAGGAGTGGACTTC
TTCCAATCTCGATCGAGATGTGGTGCATGGTTCATTAAATGTGGTATGGA
ACCTGGATGTATCGAAAAGTGCAACAAGTCAGCGTTAGCTTGCTTACAAA
AGGATGTTAAAAGTACCATCTGTTTGGAAGACGGGGGTAAATGCTACATG
AAATGTAAAGCCTACACCAAGTAAATGAAGTTGATCATCGTCTTAGCTGC
TTGCTTAGCATGTACTTTTGCAGtcAACCCATTGGatcaagctaaaaagT
GTTTGTCTGAGCACAATGCATGCATCAAGAAATTGGAAAGCCAAGGAGTG
GACTTCTTCCAATCTCGATCGAGATGTGGTGCATGGTTCATTAAATGTGG
TATGGAACCTGGATGTATCGAAAAGTGCAACAAGTCAGCGTTAGCTTGCT
TACAAAAGGATGTTAAAAGTACCATCTGTTTGGAAGACGGGGGTAAATGC
TACATGAAATGTAAAGCCTACACCAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040977XLOC_040977Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065355-exon-scaffold_439-1491911889:287355..287417TCONS_00065355-exon-scaffold_439-1491911889:287355..287417Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1510915933:287355..287417TCONS_00065355-exon-scaffold_439-1510915933:287355..287417Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1575043694:287355..287417TCONS_00065355-exon-scaffold_439-1575043694:287355..287417Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1491911889:287897..288028TCONS_00065355-exon-scaffold_439-1491911889:287897..288028Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1510915933:287897..288028TCONS_00065355-exon-scaffold_439-1510915933:287897..288028Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1575043694:287897..288028TCONS_00065355-exon-scaffold_439-1575043694:287897..288028Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1491911889:304273..304546TCONS_00065355-exon-scaffold_439-1491911889:304273..304546Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1510915933:304273..304546TCONS_00065355-exon-scaffold_439-1510915933:304273..304546Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1575043694:304273..304546TCONS_00065355-exon-scaffold_439-1575043694:304273..304546Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1491911889:305124..305149TCONS_00065355-exon-scaffold_439-1491911889:305124..305149Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1510915933:305124..305149TCONS_00065355-exon-scaffold_439-1510915933:305124..305149Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1575043694:305124..305149TCONS_00065355-exon-scaffold_439-1575043694:305124..305149Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1491911889:306016..306141TCONS_00065355-exon-scaffold_439-1491911889:306016..306141Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1510915933:306016..306141TCONS_00065355-exon-scaffold_439-1510915933:306016..306141Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1575043694:306016..306141TCONS_00065355-exon-scaffold_439-1575043694:306016..306141Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1491911889:308125..308202TCONS_00065355-exon-scaffold_439-1491911889:308125..308202Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1510915933:308125..308202TCONS_00065355-exon-scaffold_439-1510915933:308125..308202Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1575043694:308125..308202TCONS_00065355-exon-scaffold_439-1575043694:308125..308202Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1491911889:309031..309280TCONS_00065355-exon-scaffold_439-1491911889:309031..309280Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1510915933:309031..309280TCONS_00065355-exon-scaffold_439-1510915933:309031..309280Clytia hemisphaericaexon
TCONS_00065355-exon-scaffold_439-1575043694:309031..309280TCONS_00065355-exon-scaffold_439-1575043694:309031..309280Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065355-proteinTCONS_00065355-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:287355..309280 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35272	1.26367	0	0.465288	0	0	0.200054	0	0.131125	0	0	0	0.679834	0.93684	1.74775	1.89275	0.158735	0	1.8317e-09	6.16629e-10	0	0	0.561962	1.96557	0	0	0.426728	0	0.21319	0.407074
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065355 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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