TCONS_00065351 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065351
Unique NameTCONS_00065351
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1715

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065351 ID=TCONS_00065351|Name=TCONS_00065351|organism=Clytia hemisphaerica|type=transcript|length=1715bp
AACAGAAACTTGTTCGCAAACTTTaaaaaaatgtcttcctcagaaaatga
aagtgactggTCGGATGTagaggaagaagaaaaggatagTGAACATCTCA
AAGCACTGTGTTTATTTTCAGAAGCTCAATTTCAATCTATTGAGGATTGT
TTTGGTCATATGAAggataaatatgattttgatttgaaagcttttatccg
aaaacttaaaattgatttctaCAATTATgttaaatttatcaattatGTTC
GAAAAGAGAAGCCTGACCCATCAGAGGTGAAGAAAATGGTTTCCACGTCT
TTATTTGAAAAAGATTGTTATTTGCAGCCAGTTGTTGTCGATGATTTACT
ACTTCAGTTTGATGTAGATGAATTACATGAAAACAATGTAGAGATATCTA
CAAATGGCTTTCATTTGGAAGACAAATTAGCAGTAAGTGAAAGAAGAGCT
CAACTGGCTGAAGAATCTTTAGAAAGAACCATTTTGGATCTTGAGAAATG
TCGCAAAGAGTTGAAGAAGCAGTTGTTGGGTGCTGCAGAAGAAATGGTGA
CACATTACAATGAAACCAATGAAGGATACTTTGCATCTTATGCTCATCAT
GGAATCCATGAAGAAATGTTGAAGGATAAAGTACGCACTGAATCTTAtcg
tgatttcattgtaaagaACCCCAAAGTTTTTAAAGATGCAATAGTGCTCG
ATGTTGGCTGTGGTACATCGATTTTATCAATGCTTGCTGCGAAAAGTGGT
GCTAAGAAAGTCATTGGTGTTGATAATTCTGATGTAGCTCATCAAGCAAT
GGACATTGTCGGGGAAAACAAATTAGATGATATAATAACAATAATGAAAG
GAAAAGCAGAGGATATAAATATGCCCTCTAAAGTTGATGTTATTATTTCT
GAATGGATGggttattttttattgttcgaaAGTATGCTTGATACAGTTTT
ATTTTGCAGAGACAACTTATTGAATCCTAATGGACGCATTTACCCTGATA
AATGCAACATTCAGTTGTCAGCTATGGCTGATGATGAATATTATGAAAGT
AAAGTTAAATTTTGGCAGAATGTCTATGGGTTCAAAATGTCTACAATGAT
GACAAGCTCTATTGAAGAGCCTTTGATGGAGATagtaaataaagagaaaa
ttatATCGAAACCAGCTGTAATCAAGGAATTTGATTTAATGAAGATTTCA
GTCAAAGACCTCGACTTtgatgcattttttgaaattgagatTACCAAGAG
TGGAATTGTATCATCTATAATTGgttattttgatatattttttggGGATA
ATTCTTTTGAGACTCCAGTTATGTTTGGTACCGGTCCTCATGATACGCCC
ACTCATTGGAAACAGACAGTTTTCTTCCTGAAAGAACCTATTCCGTGTGA
ATCAGGAGAAAAGTTAAAAGGAcgtattttttgtaagaaaaacaagaaag
atACAAGAGGACTTGACGTTGCTCTTatctttttcaagaaaaatagcGAT
AGTGATATTTTATTGAGACAACACTATGTAATTGCTTGATAATCTTCATA
ATAAGTACAATTGTCATAAAgataaaattattcttttttatttaaaatat
acCCTTACCTTTTGAAACAGCTTTTAGAAGGgaattatttttgttaaaat
cctACCTactaaagaaattgaaaaaaaaaactatcgAAAGTCTGTTAAAG
CTCTGTCACCATGAA
Run BLAST on NCBI

protein sequence of TCONS_00065351-protein

>TCONS_00065351-protein ID=TCONS_00065351-protein|Name=TCONS_00065351-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
NRNLFANFKKMSSSENESDWSDVEEEEKDSEHLKALCLFSEAQFQSIEDC
FGHMKDKYDFDLKAFIRKLKIDFYNYVKFINYVRKEKPDPSEVKKMVSTS
LFEKDCYLQPVVVDDLLLQFDVDELHENNVEISTNGFHLEDKLAVSERRA
QLAEESLERTILDLEKCRKELKKQLLGAAEEMVTHYNETNEGYFASYAHH
GIHEEMLKDKVRTESYRDFIVKNPKVFKDAIVLDVGCGTSILSMLAAKSG
AKKVIGVDNSDVAHQAMDIVGENKLDDIITIMKGKAEDINMPSKVDVIIS
EWMGYFLLFESMLDTVLFCRDNLLNPNGRIYPDKCNIQLSAMADDEYYES
KVKFWQNVYGFKMSTMMTSSIEEPLMEIVNKEKIISKPAVIKEFDLMKIS
VKDLDFDAFFEIEITKSGIVSSIIGYFDIFFGDNSFETPVMFGTGPHDTP
THWKQTVFFLKEPIPCESGEKLKGRIFCKKNKKDTRGLDVALIFFKKNSD
SDILLRQHYVIA
Run BLAST on NCBI

transcript from alignment at scaffold_439:247978..255325+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065351 ID=TCONS_00065351|Name=TCONS_00065351|organism=Clytia hemisphaerica|type=transcript|length=7348bp|location=Sequence derived from alignment at scaffold_439:247978..255325+ (Clytia hemisphaerica)
AACAGAAACTTGTTCGCAAACTTTGTAAGTAAAGCACTTTTTTGTGTGAC
CCCAGCTGCCTGACtatgaatttctattgttttcaagtaaaaatttgaaa
attcaaaatcgattttgagaGTGTGAAATTGCCATTTTCGGGGTTGGGAT
TTGCTGGTTTGCCCTGTTAAACATCTCGAGAAATACcttcaactgctcca
acttgggactattgGTTGAAACATGTCGAAACATAGGACTGTTGAtattc
tggcctgtattttcacttactgttaaatctctttggcaacaaatttgttt
tgataactccaccaagtttatcaatcatactttctgtcataacatgttgc
gataactttcactgatatgATAGAGtgccctttttaattttttgttttca
ttcaaaatgactgcACGCCGAttagagaattagagaacgcccgccccCTA
ACCGCCTATAGCctaatgggattaacaaataaccaGTGTGTTACTTGCCT
Cgggagtgacgtcaaacgctccatcgtatcaccactaatttggtcttctt
cgtacCAGACAGTCGTGTGTGTTCCACTATGGATCTTTTTAATATTTCGA
TTTAGGAGCCTACTCGGTGCAGAAGAAATCGTGTATTTCTTAATACACCC
Ttaattaactcaaatcaaatgactttggaggttcggtgaaatggtggccg
aattgccgtcccatgttttgtcagatagttaGAACGTAGTGGTCTAAGAA
Aacggctattcttttttagaatcaaccttacaatctagtttttatattta
taaaaactagattgctgacgtgtggaaaggaatgtcggcgtgactgatcc
ttttgtttcaataataacatcaaagcgggaactaattttcttctcgtttc
tttctctcctttttctttctcgtaAGTTCGCGCTTTCCCTCCAAGTCTTC
AAGTGTGGTTAGCTCAATCGGTTAGAGCGTCTATCCCACAAGCACGGGCT
TCCGAGTTCGATCCCactgggtgtcaaatttttcaattcttcaaatttct
ttttttaattctctttctattataatgaaggtcaatcaaacaagtaacta
gcatatattacctccgctctctgtgtaaggtttagataagctatgatagc
atcacttaataagaactttttgaaattttttttttcttcaatcttttttt
taccacaagcaattattcaaggctgagatatagaagaacgggaataggcg
tttgcgcctgcgtttggtgactgacagtttcagtttcactactttcactt
tcactttcagccagcgagtgagcgagcgattctttgtaagagaatcgtca
aataacttctttcagaatcattctcgttttatactttaaagacagaatga
taattgatttccgggtcaaaatgtttgacacttgatccaatcgtttgctt
atctttcttgcgtggtcgTCATTTGAATTTTCATTCCTTTCCAGatgtca
gcaatctagtttttataaatataaaaactagattgtaaggttgattctaa
aaaagaatagccgtTTTCTTAGACCACTACGTTTTAGATCAGTTGACGGT
AGaattcaataattttcaaatttattattATCAAGTTTTCAAAAGTGTAA
TTGATTAGGTTCTTGCCTCAAAGTAGTGTTTTGCAGCAATGTTCAATCTT
TCCTGGAGGCTACGTGCAATGAAGATAGGGGTCTACACACATCTTTGATA
AATAAATCCagatttgggggggggggtacaagGGGCACTTCAAGAAAATG
CATTTTGCTGTGTCTCattggcgcaattggttaggcattgggtttgtaaa
ccaaggttgcttgcattttgATGGTTCGAGCCGGGTTAGGAGACCTNCAC
GTAAAATTATTTGCGAGTGCTAAAATAGCACGCCTAAATCAAGCAAAAAC
AGGTATTGAAAGTCCAAATTTAAGGCTTGCAAGTGCTATAATGGCACACA
CAGGCTTTTCTTCATGGCCAGGCCTGGGCTAAGTGCCTACACACATCTTT
GATAAATAAATCCAAAATAGGGGGGGGTACAAGGGGCACTTCAAGAAAAT
GCATTTTGCTGTGTCTCattggcgcaattggttaggcattgggttcgtaa
accaaggttgcttgcattttgATGGTTCGAGCCGGGTTAGGAGACCTATT
TCACTGAACAAGAAAACTTCAGagaaatacttagaaaacagttacaAAGA
CTCTAGAGTAGAAGATAATAaaggaccttgaaaaccttgaaaaccttgaa
aaatctttaaaaacctTGCAAAGCACTACCCAGTCAttcgaaaagtaaga
ataagtaaaaaactgcctgcggcgctaaacctTATAACATTTAGAGAATT
CCATATTTCTGTTTCTGTTGTGATTCTGTCGCAAGGAATGCAacatattc
ttttatcattagctgagtttttgtcactaattttccGTTTGCATGAGCCT
AAAGAAATCGACTgttccccaattttcaaatcgcttcagagcgtcttgga
ataatggccatttatcaataaaatttcaaggatTCCTTTAGCCATTAGaa
agagtcaaaatcaaaattttctatcGTGCGCCTCCTTGGTCACTGTAAAC
AATTGGTTttgcttctaattctttatttctacagttgGAAGACTAAGGAG
CTGGAGTATTTCTTTTTGTGGTATTGTTCTCGAGAGGGAGATAGGAATAG
Actatatcggctttccgaattctccccaaatgattacccatgatgcatgg
tgcaaaaaaattcacggtatcgactttccgtgaatttttttgcgcaatgc
atcatgggtaatcattcggggagaatttggaAAGCCGATATtcctatttc
tatttctttattagcatgaactttttacaagttattttcgctaatggaac
aaaaaataaataaatgaaaaaatattaagtaatTTACAGATTATAAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATTTCTCTTCAAATTTATCACATTCTACA
ATATTTACAATATCATCAGGTAGACGGTTCCATAAGCAAATTGAACTTGG
AAAGAATGATGAGCTATATACTTGATACGATATCGTCTATTTCTAACTGT
GGAAGTAATTCCCCTGGCACCAAAAGCAAATAAATGTTATTTGAtgtcct
ctatttttctttcacctaccactctgaagaaaaaccaaaattcCTGTAAA
GAGCCATGTCAAGtaagtatcaaaaaaccttgaaaagtgccaaagttttg
gccaaaaaacattgaaaaaccactttaaaatgaccaaaaaaatcttacag
ccaattcgattgacttccaaatttgccatactcaccaactttgccaaatc
tacaatttcaatgtcaaaagatcacagcttcatggcaaatttgtacattG
CTACGCCGCCATTATGATttccgttttgtgatgcttagtcagcagttttc
tgtcggcgtttATAAAGCGAacaattttttaaccaatcaaattgccgatc
ggcattgttttgctttagcattggaaggtcttctattttttaaaatcttt
ggcaaaagtggcaaaattggagcgaaaagaacacaggtctcgtgggaaca
gtgttttgcatggagacgtatggaggtaagttccaaaaataCCAAGAATG
CCAAattcaccacatcttttttatttggcatttatggcactcaaattttg
ccacatttgccaaatttaagtcaatcgaatgcaaaataattggcaatcag
ggcAAAAGTGGCATATTTTGaggtcaatcgaattggctgttaaaaacctt
gaaaatccccaaaaaaaatttgtagacATCCtgataaaagatggctaaag
TGATTTTTCCCGGAAAATGTTTGTTTGCCGTAAATAATGGATTTTTGTAT
TTGGGGAAAttaattcccttttaccatttgcaaggaaattaagctttctc
AGGATCAGCTGattagtttttgctgatttttggcacaaatatgcaaaatg
gcaatgcccaaaatgtgacggagccagattattaagaaaaacttttttgg
gcaaatttgggccaaaaactgcttaaaaatagggttttttgggcctgaat
ggtttaagtgattttcttatttggggaaattcctttttaccattttacat
tattcaacacaagctttatttttccattctgaattctTGTaaaattattg
tcactttttcttattttcatctgatgttaatcattaggtaggtccattca
gcctGTTGCTTGTTCTTGTTTCTGCGGCGTCTCTGCTAGCCGTTACTCTT
ATCATTATTTNttttccattctgaatttttgtacaattattgtcactttt
ttcttattttcatctgatgttaatcatcaggtaggtccattcagcatgtt
gcttgttatcagctgaaattgatagaaaggttgaaactgtttttctttgc
ttttagtggtcagagaggaataatccttttttaatcagtgattcaagctt
tcatattattcccgtctctaaagaagggtgtcgtaATTAGActagggatg
tcgatattagaccaacttacggtatactATGTTTTAGTAGACTGATCACC
AGCTTAAACATTGCTGAATGACTTgtcattttaatttaacttttcattat
catttagaaaaaaatgtcttcctcagaaaatgaaagtgactggTCGGATG
TagaggaagaagaaaaggatagTGAACATCTCAAAGCACTGTGTTTATTT
TCAGAAGCTCAATTTCAATCTATTGAGGATTGTTTTGGTCATATGAAgga
taaatatgattttgatttgaaagcttttatccgaaaacttaaaattgatt
tctaCAATTATgttaaatttatcaattatGTTCGAAAAGAGAAGCCTGAC
CCATCAGAGGTGAAGAAAATGGTTTCCACGTCTTTATTTGAAAAAGATTG
TTATTTGCAGCCAGTTGTTGTCGATGATTTACTACTTCAGTTTGATGTAG
ATGAATTACATGAAAACAATGTAGAGATATCTACAAATGGCTTTCATTTG
GAAGACAAATTAGCAGTAAGTGAAAGAAGAGCTCAACTGGCTGAAGAATC
TTTAGAAAGAACCATTTTGGATCTTGAGAAATGTCGCAAAGAGTTGAAGA
AGCAGTTGTTGGGTGCTGCAGAAGAAATGGTGACACATTACAATGAAACC
AATGAAGGATACTTTGCATCTTATGCTCATCATGGAATCCATGAAGAAAT
GTTGAAGGATAAAGTACGCACTGAATCTTAtcgtgatttcattgtaaaga
ACCCCAAAGTTTTTAAAGATGCAATAGTGCTCGATGTTGGCTGTGGTACA
TCGATTTTATCAATGCTTGCTGCGAAAAGTGGTGCTAAGAAAGTCATTGG
TGTTGATAATTCTGATGTAGCTCATCAAGCAATGGACATTGTCGGGGAAA
ACAAATTAGATGATATAATAACAATAATGAAAGGAAAAGCAGAGGATATA
AATATGCCCTCTAAAGTTGATGTTATTATTTCTGAATGGATGggttattt
tttattgttcgaaAGTATGCTTGATACAGTTTTATTTTGCAGAGACAACT
TATTGAATCCTAATGGACGCATTTACCCTGATAAATGCAACATTCAGTTG
TCAGCTATGGCTGATGATGAATATTATGAAAGTAAAGTTAAATTTTGGCA
GAATGTCTATGGGTTCAAAATGTCTACAATGATGACAAGCTCTATTGAAG
AGCCTTTGATGGAGATagtaaataaagagaaaattatATCGAAACCAGCT
GTAATCAAGGAATTTGATTTAATGAAGATTTCAGTCAAAGACCTCGACTT
tgatgcattttttgaaattgagatTACCAAGAGTGGAATTGTATCATCTA
TAATTGgttattttgatatattttttggGGATAATTCTTTTGAGACTCCA
GTTATGTTTGGTACCGGTCCTCATGATACGCCCACTCATTGGAAACAGAC
AGTTTTCTTCCTGAAAGAACCTATTCCGTGTGAATCAGGAGAAAAGTTAA
AAGGAcgtattttttgtaagaaaaacaagaaagatACAAGAGGACTTGAC
GTTGCTCTTatctttttcaagaaaaatagcGATAGTGATATTTTATTGAG
ACAACACTATGTAATTGCTTGATAATCTTCATAATAAGTACAATTGTCAT
AAAgataaaattattcttttttatttaaaatatacCCTTACCTTTTGAAA
CAGCTTTTAGAAGGgaattatttttgttaaaatcctACCTactaaagaaa
ttgaaaaaaaaaactatcgAAAGTCTGTTAAAGCTCTGTCACCATGAA

Coding sequence (CDS) from alignment at scaffold_439:247978..255325+

>TCONS_00065351 ID=TCONS_00065351|Name=TCONS_00065351|organism=Clytia hemisphaerica|type=CDS|length=3078bp|location=Sequence derived from alignment at scaffold_439:247978..255325+ (Clytia hemisphaerica)
AACAGAAACTTGTTCGCAAACTTTaaaaaaatgtcttcctcagaaaatga
aagtgactggTCGGATGTagaggaagaagaaaaggatagTGAACATCTCA
AAGCACTGTGTTTATTTTCAGAAGCTCAATTTCAATCTATTGAGGATTGT
TTTGGTCATATGAAggataaatatgattttgatttgaaagcttttatccg
aaaacttaaaattgatttctaCAATTATgttaaatttatcaattatGTTC
GAAAAGAGAAGCCTGACCCATCAGAGGTGAAGAAAATGGTTTCCACGTCT
TTATTTGAAAAAGATTGTTATTTGCAGCCAGTTGTTGTCGATGATTTACT
ACTTCAGTTTGATGTAGATGAATTACATGAAAACAATGTAGAGATATCTA
CAAATGGCTTTCATTTGGAAGACAAATTAGCAGTAAGTGAAAGAAGAGCT
CAACTGGCTGAAGAATCTTTAGAAAGAACCATTTTGGATCTTGAGAAATG
TCGCAAAGAGTTGAAGAAGCAGTTGTTGGGTGCTGCAGAAGAAATGGTGA
CACATTACAATGAAACCAATGAAGGATACTTTGCATCTTATGCTCATCAT
GGAATCCATGAAGAAATGTTGAAGGATAAAGTACGCACTGAATCTTAtcg
tgatttcattgtaaagaACCCCAAAGTTTTTAAAGATGCAATAGTGCTCG
ATGTTGGCTGTGGTACATCGATTTTATCAATGCTTGCTGCGAAAAGTGGT
GCTAAGAAAGTCATTGGTGTTGATAATTCTGATGTAGCTCATCAAGCAAT
GGACATTGTCGGGGAAAACAAATTAGATGATATAATAACAATAATGAAAG
GAAAAGCAGAGGATATAAATATGCCCTCTAAAGTTGATGTTATTATTTCT
GAATGGATGggttattttttattgttcgaaAGTATGCTTGATACAGTTTT
ATTTTGCAGAGACAACTTATTGAATCCTAATGGACGCATTTACCCTGATA
AATGCAACATTCAGTTGTCAGCTATGGCTGATGATGAATATTATGAAAGT
AAAGTTAAATTTTGGCAGAATGTCTATGGGTTCAAAATGTCTACAATGAT
GACAAGCTCTATTGAAGAGCCTTTGATGGAGATagtaaataaagagaaaa
ttatATCGAAACCAGCTGTAATCAAGGAATTTGATTTAATGAAGATTTCA
GTCAAAGACCTCGACTTtgatgcattttttgaaattgagatTACCAAGAG
TGGAATTGTATCATCTATAATTGgttattttgatatattttttggGGATA
ATTCTTTTGAGACTCCAGTTATGTTTGGTACCGGTCCTCATGATACGCCC
ACTCATTGGAAACAGACAGTTTTCTTCCTGAAAGAACCTATTCCGTGTGA
ATCAGGAGAAAAGTTAAAAGGAcgtattttttgtaagaaaaacaagaaag
atACAAGAGGACTTGACGTTGCTCTTatctttttcaagaaaaatagcGAT
AGTGATATTTTATTGAGACAACACTATGTAATTGCTTGAAACAGAAACTT
GTTCGCAAACTTTaaaaaaatgtcttcctcagaaaatgaaagtgactggT
CGGATGTagaggaagaagaaaaggatagTGAACATCTCAAAGCACTGTGT
TTATTTTCAGAAGCTCAATTTCAATCTATTGAGGATTGTTTTGGTCATAT
GAAggataaatatgattttgatttgaaagcttttatccgaaaacttaaaa
ttgatttctaCAATTATgttaaatttatcaattatGTTCGAAAAGAGAAG
CCTGACCCATCAGAGGTGAAGAAAATGGTTTCCACGTCTTTATTTGAAAA
AGATTGTTATTTGCAGCCAGTTGTTGTCGATGATTTACTACTTCAGTTTG
ATGTAGATGAATTACATGAAAACAATGTAGAGATATCTACAAATGGCTTT
CATTTGGAAGACAAATTAGCAGTAAGTGAAAGAAGAGCTCAACTGGCTGA
AGAATCTTTAGAAAGAACCATTTTGGATCTTGAGAAATGTCGCAAAGAGT
TGAAGAAGCAGTTGTTGGGTGCTGCAGAAGAAATGGTGACACATTACAAT
GAAACCAATGAAGGATACTTTGCATCTTATGCTCATCATGGAATCCATGA
AGAAATGTTGAAGGATAAAGTACGCACTGAATCTTAtcgtgatttcattg
taaagaACCCCAAAGTTTTTAAAGATGCAATAGTGCTCGATGTTGGCTGT
GGTACATCGATTTTATCAATGCTTGCTGCGAAAAGTGGTGCTAAGAAAGT
CATTGGTGTTGATAATTCTGATGTAGCTCATCAAGCAATGGACATTGTCG
GGGAAAACAAATTAGATGATATAATAACAATAATGAAAGGAAAAGCAGAG
GATATAAATATGCCCTCTAAAGTTGATGTTATTATTTCTGAATGGATGgg
ttattttttattgttcgaaAGTATGCTTGATACAGTTTTATTTTGCAGAG
ACAACTTATTGAATCCTAATGGACGCATTTACCCTGATAAATGCAACATT
CAGTTGTCAGCTATGGCTGATGATGAATATTATGAAAGTAAAGTTAAATT
TTGGCAGAATGTCTATGGGTTCAAAATGTCTACAATGATGACAAGCTCTA
TTGAAGAGCCTTTGATGGAGATagtaaataaagagaaaattatATCGAAA
CCAGCTGTAATCAAGGAATTTGATTTAATGAAGATTTCAGTCAAAGACCT
CGACTTtgatgcattttttgaaattgagatTACCAAGAGTGGAATTGTAT
CATCTATAATTGgttattttgatatattttttggGGATAATTCTTTTGAG
ACTCCAGTTATGTTTGGTACCGGTCCTCATGATACGCCCACTCATTGGAA
ACAGACAGTTTTCTTCCTGAAAGAACCTATTCCGTGTGAATCAGGAGAAA
AGTTAAAAGGAcgtattttttgtaagaaaaacaagaaagatACAAGAGGA
CTTGACGTTGCTCTTatctttttcaagaaaaatagcGATAGTGATATTTT
ATTGAGACAACACTATGTAATTGCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040974XLOC_040974Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065351-proteinTCONS_00065351-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065351-exon-scaffold_439-1491911889:247978..248001TCONS_00065351-exon-scaffold_439-1491911889:247978..248001Clytia hemisphaericaexon
TCONS_00065351-exon-scaffold_439-1510915933:247978..248001TCONS_00065351-exon-scaffold_439-1510915933:247978..248001Clytia hemisphaericaexon
TCONS_00065351-exon-scaffold_439-1575043694:247978..248001TCONS_00065351-exon-scaffold_439-1575043694:247978..248001Clytia hemisphaericaexon
TCONS_00065351-exon-scaffold_439-1491911889:253635..255325TCONS_00065351-exon-scaffold_439-1491911889:253635..255325Clytia hemisphaericaexon
TCONS_00065351-exon-scaffold_439-1510915933:253635..255325TCONS_00065351-exon-scaffold_439-1510915933:253635..255325Clytia hemisphaericaexon
TCONS_00065351-exon-scaffold_439-1575043694:253635..255325TCONS_00065351-exon-scaffold_439-1575043694:253635..255325Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:247978..255325 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.4307	16.3272	7.13081	4.78417	24.2438	12.9771	18.2863	19.6732	11.1427	8.87511	8.65656	6.28626	8.10313	8.97875	8.33106	9.03094	6.35526	7.1701	1.63442	2.12697	11.4651	10.5787	49.7173	46.8041	6.00871	10.5146	4.85286	2.42118	26.7476	31.0486
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR025799Arg_MeTrfase
IPR013087Znf_C2H2_type
IPR029063SAM-dependent_MTases
Vocabulary: Biological Process
TermDefinition
GO:0006479protein methylation
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006479 protein methylation
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003676 nucleic acid binding
Blast
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BLAST of TCONS_00065351 vs. Swiss-Prot (Human)
Match: ANM3 (Protein arginine N-methyltransferase 3 OS=Homo sapiens GN=PRMT3 PE=1 SV=3)

HSP 1 Score: 394.045 bits (1011), Expect = 8.398e-130
Identity = 223/507 (43.98%), Postives = 326/507 (64.30%), Query Frame = 1 
Query:   19 NFKKMSSSENESDWSDVEEEEKDSEHLK--ALCLFSEAQFQSIEDCFGHMKDKYDFDLKAFIRKLKIDFYNYVKFINYVRKEKPDPSEVKKMVSTSLFEKDCYLQPXXXXXXXXXXXXXXXHEN-NVEIS-TNGFHLEDKLAVSERRAQLAEESLERTIL------DLEKCRK-------ELKKQLLGAAEEMVTHYNETNEG-YFASYAHHGIHEEMLKDKVRTESYRDFIVKNPKVFKDAIVLDVGCGTSILSMLAAKSGAKKVIGVDNSDVAHQAMDIVGENKLDDIITIMKGKAEDINMP-SKVDVIISEWMGYFLLFESMLDTVLFCRDNLLNPNGRIYPDKCNIQLSAMADDEYYESKVKFWQNVYGFKMSTMMTSSIEEPLMEIVNKEKIISKPAVIKEFDLMKISVKDLDFDAFFEIEITKSGIVSSIIGYFDIFFGDNSFETPVMFGTGPHDTPTHWKQTVFFLKEPIPCESGEKLKGRIFCKKNKKDTRGLDVALIF 1482
            +  ++S S +E+ W D  E++ D  H K    CLF    F S E+ F H K ++ F++ + + K  ++FY Y+K IN++R + P    +  + +   +EK+ YL+PV+ DDLLLQFDV++L+E  +V  S  NG  L +  +V E+   +   +L           DL+K ++           +   ++  ++    E  +G YF+SY H+GIHEEMLKDK+RTESYRDFI +NP +FKD +VLDVGCGT ILSM AAK+GAKKV+GVD S++ +QAMDI+  NKL+D IT++KGK E++++P  KVDVIISEWMGYFLLFESMLD+VL+ ++  L   G +YPD C I L A++D   +  ++ FW +VYGFKMS M  + I E ++E+++ + +IS+P  IK  D    S+ DL+F + F ++IT++ + ++I GYFDI+F  N     V+F TGP  T THWKQTVF L++P   ++GE LKG++   K+KKD R L V L  
Sbjct:   20 DLPELSDSGDEAAWED--EDDADLPHGKQQTPCLFCNRLFTSAEETFSHCKSEHQFNIDSMVHKHGLEFYGYIKLINFIRLKNPTVEYMNSIYNPVPWEKEEYLKPVLEDDLLLQFDVEDLYEPVSVPFSYPNG--LSENTSVVEKLKHMEARALSAEAALARAREDLQKMKQFAQDFVMHTDVRTCSSSTSVIADLQEDEDGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVNKHADRIAFWDDVYGFKMSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCHTTSISDLEFSSDFTLKITRTSMCTAIAGYFDIYFEKNC-HNRVVFSTGPQSTKTHWKQTVFLLEKPFSVKAGEALKGKVTVHKSKKDPRSLTVTLTL 521
The following BLAST results are available for this feature:
BLAST of TCONS_00065351 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANM38.398e-13043.98Protein arginine N-methyltransferase 3 OS=Homo sap... [more]
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