TCONS_00065256 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00065256
Unique Name	TCONS_00065256
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1575

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_435:123574..129024+
coding sequence from alignment at scaffold_435:123574..129024+

transcript sequence

>TCONS_00065256 ID=TCONS_00065256|Name=TCONS_00065256|organism=Clytia hemisphaerica|type=transcript|length=1575bp
AAGGAAAAGCTTCCAAAACAACTTCAAAGATGGTTGCAACGAAGACCTTA
CCTCTGGTGCTGGGGTCCCTCTTGGGAATCATGCTGGCCATTCTGGTGGT
CGTTTTGTTCTTGTTCTACAAAAAGCGAAAGGAGAGCATCGAATTCAGCA
TACCGTTGGAGAAGATGACCAGAGGGCTGAAAAGCTCTTTGAAAAGGAGA
TCAACTTCGTCGAAGAACAGCAAAAGTAGTAACGACAGTATACACATCAA
ACCACAAGGAACGCCAATTTTGAGGGACACTCAATTCTGGGTACCGGAGG
TATACAACTCCATCATCCAGCCCTCGTCCGCTGCTCCCATTCGCAAAACG
AGTCGATTGCAATCGACACTGGATCGAGAAATTTATTCGAAAGCGCACGA
CACCTCTTACCTTCAAGCAGCTCAGCCTGAGGTTTTTGACGGTAAAAACG
AGAAACGACCTTCGACAATCTCCATGATGCGACGTAACACGTCATCGCTG
AAACGTGGTGATATCGCGCGACGGTTAGCCAGTGAACAAGGCAGTCGTGG
CATGCTTAACTTCTCAATACAATATAAACAAGCAACcgcCAAACTAACAA
TCATCATATTGAAAGCCGAAGGATTGCCGGTTCGAAAAGACGGTGAGTTT
TGTGATCCGTTTGTTGACATTCAAGTCAGTCCGTACTACAAGCGTCGAAT
GCATTCAGAAGTTcatcaaaaaactcaaaaccCTGTCTTCAACCAATCGT
TTGATTCGGAGGTGCCGCCATACGAGGTCCGTGGTCAAACGATACATTTC
ACCGTGTTAGATTTTAGTCAGCAGTTAGCCCACGAACCGATTGGCTCAGT
GGCTTTTAAGATGGACAGTTTGGACAGGGATGCTTTCAACGCGGGCAAAG
AATTCACACTGTGGAAGAAAATTGATAAGGATGCTTTGGAATCAGGTGAT
CGACTAGACGGTAAACGCGAATACCCAATGGAAATGGAGCTAGACAGGAC
AGCCATGTTGTTACTGCTCAGTGTCAATTATTTGAAAATCGCCGAACGAT
TGACGGTGACGGTGAATAAAGCACGCAATCTACTACTGGTCGACCGCAAA
GGCAAATTAGATGGCATGTCATGCATAATCCCTCCTATTAGGACTCCTAT
TTCGAAACGGAAAAAATCCCGCAAAAacgggaaaatcggggaaattgaAC
ACGAAGATCTTGAAAATAATAATGAGAATGGGAAACGAAGTGTACTGGAT
CATCCGTACGTCCAAGTTACTCTAAAGCATTTCGGACGCGTGCTCAAAAA
ATTACGGACAGGCGTGGTGAAACACGAAACGAATCCTGTATTTAATAAGA
CTTTATTATTCGATGTTCCAAAGCACCTTGTAGACTCTGTATCACTGACA
GTAAAATTACGTCATCATAACGAACTTGGGCGTGACCGGACTTTTGCTAT
TTTAACGGTGGGTAAAAATGCGGTGGGGTCCGGTTCGGAGCAATGGACGG
ATATGTTGAATTCATCGGAGACCGTACAACGCTGGCACCGTTTGATACCT
ATTGAACCGGTTGATGATTAAAATA

Run BLAST on NCBI

protein sequence of TCONS_00065256-protein

>TCONS_00065256-protein ID=TCONS_00065256-protein|Name=TCONS_00065256-protein|organism=Clytia hemisphaerica|type=polypeptide|length=522bp
GKASKTTSKMVATKTLPLVLGSLLGIMLAILVVVLFLFYKKRKESIEFSI
PLEKMTRGLKSSLKRRSTSSKNSKSSNDSIHIKPQGTPILRDTQFWVPEV
YNSIIQPSSAAPIRKTSRLQSTLDREIYSKAHDTSYLQAAQPEVFDGKNE
KRPSTISMMRRNTSSLKRGDIARRLASEQGSRGMLNFSIQYKQATAKLTI
IILKAEGLPVRKDGEFCDPFVDIQVSPYYKRRMHSEVHQKTQNPVFNQSF
DSEVPPYEVRGQTIHFTVLDFSQQLAHEPIGSVAFKMDSLDRDAFNAGKE
FTLWKKIDKDALESGDRLDGKREYPMEMELDRTAMLLLLSVNYLKIAERL
TVTVNKARNLLLVDRKGKLDGMSCIIPPIRTPISKRKKSRKNGKIGEIEH
EDLENNNENGKRSVLDHPYVQVTLKHFGRVLKKLRTGVVKHETNPVFNKT
LLFDVPKHLVDSVSLTVKLRHHNELGRDRTFAILTVGKNAVGSGSEQWTD
MLNSSETVQRWHRLIPIEPVDD

Run BLAST on NCBI

transcript from alignment at scaffold_435:123574..129024+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00065256 ID=TCONS_00065256|Name=TCONS_00065256|organism=Clytia hemisphaerica|type=transcript|length=5451bp|location=Sequence derived from alignment at scaffold_435:123574..129024+ (Clytia hemisphaerica)
AAGGAAAAGCTTCCAAAACAACTTCAAAGGTAATGTACGtttttttggat
gatttttttATACTTATCTCCTGGTCAGCTTGGTTCAGATAACAGAATTT
GCTTTTGATAAAACTCAATTGTTCAAATAACGGTGAACCTTTTTATGTTT
ATTATGACTAGATGGTTGCAACGAAGACCTTACCTCTGGTGCTGGGGTCC
CTCTTGGGAATCATGCTGGCCATTCTGGTGGTCGTTTTGTTCTTGTTCTA
CAAAAAGCGAAAGGAGAGCATCGAATTCAGCATACCGTTGGAGAAGATGA
CCAGAGGGCTGAAAAGCTCTTTGAAAAGGAGATCAACTTCGTCGAAGAAC
AGCAAAAGTAGTAACGACAGTATACACATCAAACCACAAGGAGTGAGTAg
tgatttgtttttaaataccGTTTTATGATGGTATAGTCTCTTGgaagttc
ttttcttttaaatcctgaagtTATTTTATGTATCAATGTTATGACGTTCT
GTAAAGTTTTTATCAAACTTTTGATTTTGAGCAACAAAACCTGAATCTAG
GCTTCTTCCACATCGACAATTTGCTGTGTTTCAAATTATTACAAACATTT
CGAGTAAACCCTTTCAATTGCCGAGCCGAACAGTGTTAGATGGGTAATAT
TAATGGTCTCGATTCTCTTAGAGATTTTGGATGAAAGTTTATAAAATAAT
ACTCAACACAATTTGTTACAGACGCCAATTTTGAGGGACACTCAATTCTG
GGTACCGGAGGTATACAACTCCATCATCCAGCCCTCGTCCGCTGCTCCCA
TTCGCAAAACGAGTCGATTGCAATCGACACTGGATCGAGAAATTTATTCG
AAAGCGCACGACACCTCTTACCTTCAAGCAGCTCAGCCTGAGGTTTGTAA
CATGATTTTTTCACTGGATAGTTCTATTGAAAAATTAgcataaaattctg
aaaaacttgaggaagcttttaaaattttaaataaagcaGTAATTTACTAG
TCACAcacagcaaattttttttttaaatcaccatGATACTTTTGGTGAAT
TTACCAGATTTCATTTTCACTCCTGTTTACTTAGGTTAAATTTCTGATAC
CTTTGCAGGGGAGAATTTGCATGGTCAGGTTTTTCACTTTCACTTGGATT
GGTAAGATAATCTGGAtctaaaaaaaaagtatatcGAAAAAAGAGATAGT
GTCCTGCAATAACCTTTCCCCTTTTACAAGGTTTTTGACGGTAAAAACGA
GAAACGACCTTCGACAATCTCCATGATGCGACGTAACACGTCATCGCTGA
AACGTGGTGATATCGCGCGACGGTTAGCCAGTGAACAAGGCAGTCGTGGC
ATGCTTAACTTCTCAATACAATATAAACAAGCAACGTACGTATTTTGACT
TACCCATTTCTGTGCTATGTGACTTTTtgggcataccggataagtgggat
gggggaacctaagtgggaacctaaatgaacaccggaaaagtgggatatCC
ATTTCTGTGCTATGtgacttgttttgtttttgtaccATGCTAAATACAGT
ctctttttacattttttatatcttatgtccctttaagccaCCCAACTCGC
CTTTCTTTCAAATCAATTGATCAATTTTGAGTGACTCGGATTTTGAACTC
GTTGATTTTGACGGTTCGTCAAACTTTCAAGAATCTTTCTTGATGAATTA
CTTAATTCTAGCCTTGTTTAGCCTTGTTAAACGAATAtgaagttgatttt
gtttttcatttttctttttagcgcCAAACTAACAATCATCATATTGAAAG
CCGAAGGATTGCCGGTTCGAAAAGACGGTGAGTTTTGTGATCCGTTTGTT
GACATTCAAGTCAGTCCGTACTACAAGCGTCGAATGCATTCAGAAGTTca
tcaaaaaactcaaaaccCTGTCTTCAACCAATCGTTTGATTCGGAGGTGC
CGCCATACGAGGTCCGTGGTCAAACGATACATTTCACCGTGTTAGATTTT
AGTCAGCAGTTAGCCCACGAACCGATTGGCTCAGTGGCTTTTAAGATGGA
CAGTTTGGACAGGGATGCTTTCAACGCGGGCAAAGAATTCACACTGTGGA
AGAAAATTGATAAGGTAATGTAACTCAATTATaagtcaaaaacttttact
GGAAGAATGTCAGGGTTTTTAAGTTACCCGGCCTGCTAAAAAGCTCTTTT
TCGGATGACGAAATATCGGGGTATTTTTTTTGACATGACCTCTCTCAAAA
TTTGATCACTTTCTCGAAATGGTAGACATTTGATTTCAATATATCAGCAT
CCAATATAATGTTGAAATGAGTAAAAACATTACAGTGAGAGATATTACTG
AAGTCTTAAAATTGATCAGGAAGTTGGATAAGACTCAACAGCCTATATTA
TCTATGCCAATATTTATGGCGAATAATAATGAACTCCAAAAGTTTATTTT
AAATTCACATTAAACACAATGGAATACTTTTCTCCTTAATAATAGGATGC
TTTGGAATCAGGTGATCGACTAGACGGTAAACGCGAATACCCAATGGAAA
TGGAGCTAGACAGGACAGCCATGTTGTTACTGCTCAGTGTCAATTATTTG
AAAATCGCCGAACGATTGACGGTGACGGTGAATAAAGCACGCAATCTACT
ACTGGTCGACCGCAAAGGCAAATTAGGTATGGAATTTCAACTTTCTATCG
GGAGAGTGCATTCGGACTCGTGAAAAGATCCTGACTTTTGGTTTAAAGGA
GCGGTGCTTAAGAAATGGTAGACATCGTTTACAAAGGTCAAAAACTAGAA
GAAGGGAGGGAGTTATGCATGTATGGCATGAAAACTAACAATCGTTTTAA
TCGTTCACTtcctttcttttcattttctcttccgGGGGCGGGTCAATGTA
CAATATAACAGGGTGCTCCATGTAATttcgttttgtttttctttttgttt
tttaattctgttttagtttttgagtaaCGTCTTAAAAGTcaaatcaagta
tcaaataattAAAAGCTTCTCTTTGGAAAGCATCTAGTCGTCGTCAAAAT
GAAACGATTGTTGCAAACATACCTTTGTATTGTACACTCCGCCGTCCCGC
GTAAATAGTCTTAAAAATCAACTTGTTATTTCTAACCCGCTTTCACTTGT
CCATGCATGCATTTTCACTCATATCGGCTTCTCTTTACTTTCcttataat
ttcattttctagCACGCCGATACACTATAATCTAACGTTATCATTATTGC
ATTACATTTTCATTCGTTCATATTAATGACAATACCATTATCTCGATTCA
TCGAATGGTTTGCGGTGAACAACTCACGTGTGCGTTTGGGGCTGATTTGA
ATCCGGGTTTAgcgtttgaaaaatgatttataAGTGTAATTGGCAAGGGC
ATTTAGACATTTTAGATACAGTCCTTTCTGAAATTATAATAATCATTTGC
CAGATATAACGTTAACCCCAATTAGGATGTTTCAATTTCTTTCCCGTAAA
TCTTCAACTGTTTTGACTGTTAACGCGATTCGTTCAAAATCAACCACCAA
TGCGCACATCGAGTTCACCATCAACCAAACCAGCCAACTTACTAACCTTA
GGGGAATAATCAGATGGTTGTTTAACATTTCTTGACTCGTAGAATCTTTG
TATGATCCTGAACAAAACATCCAAATCGTTTGCCGAACTATTTTTCTAAG
TCGGAAAATagatacagtggagtctccataactcgaacgctcaatttaat
ttaattttcggaaatttaaaaataaagattggtctataaggcattgttaa
ctgaagggatcatgaaacttgttcgagttaagaaggcattcgagttatag
aggttcgagttgaaGGGATTCCACTGTACTAGCAAAAAGATGAGCGATTT
TGAAGTTTTCTCAGAACCATAAAAGGTTTTAACTgttcaaaaatctcaaa
ccatctgattatcccttttaaacttcttttctcttcttttactAACCAGA
TGGCATGTCATGCATAATCCCTCCTATTAGGACTCCTATTTCGAAACGGA
AAAAATCCCGCAAAAacgggaaaatcggggaaattgaACACGAAGATCTT
GAAAATAATAATGAGAATGGGAAACGAAGTGTACTGGGTAAGTGAAGCTG
TAGTGGTAAGATTGGAAAGAAGTGTGTTTTCACTGATAATAAGAGTGATT
CGGTAAGAGACGAAATGATGAATCTTCTTGCACTCGTTCGTTCGAATCAA
CACTTCTCAAAATACCTCATCATTCGAGTTTTTCTGTAATTTGTACAAAC
AGTATTTCGTGTAAGAGCCCCTGTACGCACTGCTATGTTACAAAAGAATC
GCCGGTGCGGATTTGTACATGCTACTACTGTCTACTGTATTTGAGAAAGA
GAGAAATAAAGAGGGCCTAACATTTCAAGTGTTTCGGAACCCCGCATGAG
GGAACTGAATCAAGCAACAATGTTTTTGCCATTTGCTGCAATCTTACAGC
GTTTTTCAGCCTCAATTCGTTTAAAGTTCATAAATTGTCGAATGACCACT
CTAACTCTAAGTGAAAATGCATTTCTTTCTGAGTCTAAGAATTGTCCATT
ACCAGCTTTGTAAGGATCTTCTCTTTACAATGTAAAGGAAGACTAAAACA
CAAACTGTAGACGATTTTAAGGCTCTATCTGCACTAAGCATCGTGCACAA
TTTATCAATTAATATGGCTTCAAATTGGCTACACTTCACAGTTCATATAA
CTTTAAGGGGAGAAACTTGCGCTGAAAGAAACGTTCGCGTATTTTTGCAA
AAGTGTATCTTCCCTTATAGTATTTAACGTGATCAAACGCTGGTATTAGT
CTGCTTTCTCGATACGCGAATGTCAACAAtctttcttctcttgctttttc
ttttttcacgaTCCCAGATTTTTACAGGTATTTCTAAATATAAAAATGAC
GCAATCTTGACTTTCATATCGTGCATCATAAAtactttcccagctggcac
acaacatcgcttcaacgttcatctaacgttcttTGGACGTTTTGACCGTT
GTCTTGATGTTTTGTACCAGTGGGGATTAGAATCATGCAAATTCAgattt
aattttgattcttatCTATTTCAGATCATCCGTACGTCCAAGTTACTCTA
AAGCATTTCGGACGCGTGCTCAAAAAATTACGGACAGGCGTGGTGAAACA
CGAAACGAATCCTGTATTTAATAAGACTTTATTATTCGATGTTCCAAAGC
ACCTTGTAGACTCTGTATCACTGACAGTAAAATTACGTCATCATAACGAA
CTTGGGCGTGACCGGACTTTTGCTATTTTAACGGTGGGTAAAAATGCGGT
GGGGTCCGGTTCGGAGCAATGGACGGATATGTTGAATTCATCGGAGACCG
TACAACGCTGGCACCGTTTGATACCTATTGAACCGGTTGATGATTAAAAT
A

Coding sequence (CDS) from alignment at scaffold_435:123574..129024+

>TCONS_00065256 ID=TCONS_00065256|Name=TCONS_00065256|organism=Clytia hemisphaerica|type=CDS|length=12552bp|location=Sequence derived from alignment at scaffold_435:123574..129024+ (Clytia hemisphaerica)
GGAAAAGCTTCCAAAACAACTTCAAAGATGGTTGCAACGAAGACCTTACC
TCTGGTGCTGGGGTCCCTCTTGGGAATCATGCTGGCCATTCTGGTGGTCG
TTTTGTTCTTGTTCTACAAAAAGCGAAAGGAGAGCATCGAATTCAGCATA
CCGTTGGAGAAGATGACCAGAGGGCTGAAAAGCTCTTTGAAAAGGAGATC
AACTTCGTCGAAGAACAGCAAAAGTAGTAACGACAGTATACACATCAAAC
CACAAGGAACGCCAATTTTGAGGGACACTCAATTCTGGGTACCGGAGGTA
TACAACTCCATCATCCAGCCCTCGTCCGCTGCTCCCATTCGCAAAACGAG
TCGATTGCAATCGACACTGGATCGAGAAATTTATTCGAAAGCGCACGACA
CCTCTTACCTTCAAGCAGCTCAGCCTGAGGTTTTTGACGGTAAAAACGAG
AAACGACCTTCGACAATCTCCATGATGCGACGTAACACGTCATCGCTGAA
ACGTGGTGATATCGCGCGACGGTTAGCCAGTGAACAAGGCAGTCGTGGCA
TGCTTAACTTCTCAATACAATATAAACAAGCAACcgcCAAACTAACAATC
ATCATATTGAAAGCCGAAGGATTGCCGGTTCGAAAAGACGGTGAGTTTTG
TGATCCGTTTGTTGACATTCAAGTCAGTCCGTACTACAAGCGTCGAATGC
ATTCAGAAGTTcatcaaaaaactcaaaaccCTGTCTTCAACCAATCGTTT
GATTCGGAGGTGCCGCCATACGAGGTCCGTGGTCAAACGATACATTTCAC
CGTGTTAGATTTTAGTCAGCAGTTAGCCCACGAACCGATTGGCTCAGTGG
CTTTTAAGATGGACAGTTTGGACAGGGATGCTTTCAACGCGGGCAAAGAA
TTCACACTGTGGAAGAAAATTGATAAGGATGCTTTGGAATCAGGTGATCG
ACTAGACGGTAAACGCGAATACCCAATGGAAATGGAGCTAGACAGGACAG
CCATGTTGTTACTGCTCAGTGTCAATTATTTGAAAATCGCCGAACGATTG
ACGGTGACGGTGAATAAAGCACGCAATCTACTACTGGTCGACCGCAAAGG
CAAATTAGATGGCATGTCATGCATAATCCCTCCTATTAGGACTCCTATTT
CGAAACGGAAAAAATCCCGCAAAAacgggaaaatcggggaaattgaACAC
GAAGATCTTGAAAATAATAATGAGAATGGGAAACGAAGTGTACTGGATCA
TCCGTACGTCCAAGTTACTCTAAAGCATTTCGGACGCGTGCTCAAAAAAT
TACGGACAGGCGTGGTGAAACACGAAACGAATCCTGTATTTAATAAGACT
TTATTATTCGATGTTCCAAAGCACCTTGTAGACTCTGTATCACTGACAGT
AAAATTACGTCATCATAACGAACTTGGGCGTGACCGGACTTTTGCTATTT
TAACGGTGGGTAAAAATGCGGTGGGGTCCGGTTCGGAGCAATGGACGGAT
ATGTTGAATTCATCGGAGACCGTACAACGCTGGCACCGTTTGATACCTAT
TGAACCGGTTGATGATTAAGGAAAAGCTTCCAAAACAACTTCAAAGATGG
TTGCAACGAAGACCTTACCTCTGGTGCTGGGGTCCCTCTTGGGAATCATG
CTGGCCATTCTGGTGGTCGTTTTGTTCTTGTTCTACAAAAAGCGAAAGGA
GAGCATCGAATTCAGCATACCGTTGGAGAAGATGACCAGAGGGCTGAAAA
GCTCTTTGAAAAGGAGATCAACTTCGTCGAAGAACAGCAAAAGTAGTAAC
GACAGTATACACATCAAACCACAAGGAACGCCAATTTTGAGGGACACTCA
ATTCTGGGTACCGGAGGTATACAACTCCATCATCCAGCCCTCGTCCGCTG
CTCCCATTCGCAAAACGAGTCGATTGCAATCGACACTGGATCGAGAAATT
TATTCGAAAGCGCACGACACCTCTTACCTTCAAGCAGCTCAGCCTGAGGT
TTTTGACGGTAAAAACGAGAAACGACCTTCGACAATCTCCATGATGCGAC
GTAACACGTCATCGCTGAAACGTGGTGATATCGCGCGACGGTTAGCCAGT
GAACAAGGCAGTCGTGGCATGCTTAACTTCTCAATACAATATAAACAAGC
AACcgcCAAACTAACAATCATCATATTGAAAGCCGAAGGATTGCCGGTTC
GAAAAGACGGTGAGTTTTGTGATCCGTTTGTTGACATTCAAGTCAGTCCG
TACTACAAGCGTCGAATGCATTCAGAAGTTcatcaaaaaactcaaaaccC
TGTCTTCAACCAATCGTTTGATTCGGAGGTGCCGCCATACGAGGTCCGTG
GTCAAACGATACATTTCACCGTGTTAGATTTTAGTCAGCAGTTAGCCCAC
GAACCGATTGGCTCAGTGGCTTTTAAGATGGACAGTTTGGACAGGGATGC
TTTCAACGCGGGCAAAGAATTCACACTGTGGAAGAAAATTGATAAGGATG
CTTTGGAATCAGGTGATCGACTAGACGGTAAACGCGAATACCCAATGGAA
ATGGAGCTAGACAGGACAGCCATGTTGTTACTGCTCAGTGTCAATTATTT
GAAAATCGCCGAACGATTGACGGTGACGGTGAATAAAGCACGCAATCTAC
TACTGGTCGACCGCAAAGGCAAATTAGATGGCATGTCATGCATAATCCCT
CCTATTAGGACTCCTATTTCGAAACGGAAAAAATCCCGCAAAAacgggaa
aatcggggaaattgaACACGAAGATCTTGAAAATAATAATGAGAATGGGA
AACGAAGTGTACTGGATCATCCGTACGTCCAAGTTACTCTAAAGCATTTC
GGACGCGTGCTCAAAAAATTACGGACAGGCGTGGTGAAACACGAAACGAA
TCCTGTATTTAATAAGACTTTATTATTCGATGTTCCAAAGCACCTTGTAG
ACTCTGTATCACTGACAGTAAAATTACGTCATCATAACGAACTTGGGCGT
GACCGGACTTTTGCTATTTTAACGGTGGGTAAAAATGCGGTGGGGTCCGG
TTCGGAGCAATGGACGGATATGTTGAATTCATCGGAGACCGTACAACGCT
GGCACCGTTTGATACCTATTGAACCGGTTGATGATTAAGGAAAAGCTTCC
AAAACAACTTCAAAGATGGTTGCAACGAAGACCTTACCTCTGGTGCTGGG
GTCCCTCTTGGGAATCATGCTGGCCATTCTGGTGGTCGTTTTGTTCTTGT
TCTACAAAAAGCGAAAGGAGAGCATCGAATTCAGCATACCGTTGGAGAAG
ATGACCAGAGGGCTGAAAAGCTCTTTGAAAAGGAGATCAACTTCGTCGAA
GAACAGCAAAAGTAGTAACGACAGTATACACATCAAACCACAAGGAACGC
CAATTTTGAGGGACACTCAATTCTGGGTACCGGAGGTATACAACTCCATC
ATCCAGCCCTCGTCCGCTGCTCCCATTCGCAAAACGAGTCGATTGCAATC
GACACTGGATCGAGAAATTTATTCGAAAGCGCACGACACCTCTTACCTTC
AAGCAGCTCAGCCTGAGGTTTTTGACGGTAAAAACGAGAAACGACCTTCG
ACAATCTCCATGATGCGACGTAACACGTCATCGCTGAAACGTGGTGATAT
CGCGCGACGGTTAGCCAGTGAACAAGGCAGTCGTGGCATGCTTAACTTCT
CAATACAATATAAACAAGCAACcgcCAAACTAACAATCATCATATTGAAA
GCCGAAGGATTGCCGGTTCGAAAAGACGGTGAGTTTTGTGATCCGTTTGT
TGACATTCAAGTCAGTCCGTACTACAAGCGTCGAATGCATTCAGAAGTTc
atcaaaaaactcaaaaccCTGTCTTCAACCAATCGTTTGATTCGGAGGTG
CCGCCATACGAGGTCCGTGGTCAAACGATACATTTCACCGTGTTAGATTT
TAGTCAGCAGTTAGCCCACGAACCGATTGGCTCAGTGGCTTTTAAGATGG
ACAGTTTGGACAGGGATGCTTTCAACGCGGGCAAAGAATTCACACTGTGG
AAGAAAATTGATAAGGATGCTTTGGAATCAGGTGATCGACTAGACGGTAA
ACGCGAATACCCAATGGAAATGGAGCTAGACAGGACAGCCATGTTGTTAC
TGCTCAGTGTCAATTATTTGAAAATCGCCGAACGATTGACGGTGACGGTG
AATAAAGCACGCAATCTACTACTGGTCGACCGCAAAGGCAAATTAGATGG
CATGTCATGCATAATCCCTCCTATTAGGACTCCTATTTCGAAACGGAAAA
AATCCCGCAAAAacgggaaaatcggggaaattgaACACGAAGATCTTGAA
AATAATAATGAGAATGGGAAACGAAGTGTACTGGATCATCCGTACGTCCA
AGTTACTCTAAAGCATTTCGGACGCGTGCTCAAAAAATTACGGACAGGCG
TGGTGAAACACGAAACGAATCCTGTATTTAATAAGACTTTATTATTCGAT
GTTCCAAAGCACCTTGTAGACTCTGTATCACTGACAGTAAAATTACGTCA
TCATAACGAACTTGGGCGTGACCGGACTTTTGCTATTTTAACGGTGGGTA
AAAATGCGGTGGGGTCCGGTTCGGAGCAATGGACGGATATGTTGAATTCA
TCGGAGACCGTACAACGCTGGCACCGTTTGATACCTATTGAACCGGTTGA
TGATTAAGGAAAAGCTTCCAAAACAACTTCAAAGATGGTTGCAACGAAGA
CCTTACCTCTGGTGCTGGGGTCCCTCTTGGGAATCATGCTGGCCATTCTG
GTGGTCGTTTTGTTCTTGTTCTACAAAAAGCGAAAGGAGAGCATCGAATT
CAGCATACCGTTGGAGAAGATGACCAGAGGGCTGAAAAGCTCTTTGAAAA
GGAGATCAACTTCGTCGAAGAACAGCAAAAGTAGTAACGACAGTATACAC
ATCAAACCACAAGGAACGCCAATTTTGAGGGACACTCAATTCTGGGTACC
GGAGGTATACAACTCCATCATCCAGCCCTCGTCCGCTGCTCCCATTCGCA
AAACGAGTCGATTGCAATCGACACTGGATCGAGAAATTTATTCGAAAGCG
CACGACACCTCTTACCTTCAAGCAGCTCAGCCTGAGGTTTTTGACGGTAA
AAACGAGAAACGACCTTCGACAATCTCCATGATGCGACGTAACACGTCAT
CGCTGAAACGTGGTGATATCGCGCGACGGTTAGCCAGTGAACAAGGCAGT
CGTGGCATGCTTAACTTCTCAATACAATATAAACAAGCAACcgcCAAACT
AACAATCATCATATTGAAAGCCGAAGGATTGCCGGTTCGAAAAGACGGTG
AGTTTTGTGATCCGTTTGTTGACATTCAAGTCAGTCCGTACTACAAGCGT
CGAATGCATTCAGAAGTTcatcaaaaaactcaaaaccCTGTCTTCAACCA
ATCGTTTGATTCGGAGGTGCCGCCATACGAGGTCCGTGGTCAAACGATAC
ATTTCACCGTGTTAGATTTTAGTCAGCAGTTAGCCCACGAACCGATTGGC
TCAGTGGCTTTTAAGATGGACAGTTTGGACAGGGATGCTTTCAACGCGGG
CAAAGAATTCACACTGTGGAAGAAAATTGATAAGGATGCTTTGGAATCAG
GTGATCGACTAGACGGTAAACGCGAATACCCAATGGAAATGGAGCTAGAC
AGGACAGCCATGTTGTTACTGCTCAGTGTCAATTATTTGAAAATCGCCGA
ACGATTGACGGTGACGGTGAATAAAGCACGCAATCTACTACTGGTCGACC
GCAAAGGCAAATTAGATGGCATGTCATGCATAATCCCTCCTATTAGGACT
CCTATTTCGAAACGGAAAAAATCCCGCAAAAacgggaaaatcggggaaat
tgaACACGAAGATCTTGAAAATAATAATGAGAATGGGAAACGAAGTGTAC
TGGATCATCCGTACGTCCAAGTTACTCTAAAGCATTTCGGACGCGTGCTC
AAAAAATTACGGACAGGCGTGGTGAAACACGAAACGAATCCTGTATTTAA
TAAGACTTTATTATTCGATGTTCCAAAGCACCTTGTAGACTCTGTATCAC
TGACAGTAAAATTACGTCATCATAACGAACTTGGGCGTGACCGGACTTTT
GCTATTTTAACGGTGGGTAAAAATGCGGTGGGGTCCGGTTCGGAGCAATG
GACGGATATGTTGAATTCATCGGAGACCGTACAACGCTGGCACCGTTTGA
TACCTATTGAACCGGTTGATGATTAAGGAAAAGCTTCCAAAACAACTTCA
AAGATGGTTGCAACGAAGACCTTACCTCTGGTGCTGGGGTCCCTCTTGGG
AATCATGCTGGCCATTCTGGTGGTCGTTTTGTTCTTGTTCTACAAAAAGC
GAAAGGAGAGCATCGAATTCAGCATACCGTTGGAGAAGATGACCAGAGGG
CTGAAAAGCTCTTTGAAAAGGAGATCAACTTCGTCGAAGAACAGCAAAAG
TAGTAACGACAGTATACACATCAAACCACAAGGAACGCCAATTTTGAGGG
ACACTCAATTCTGGGTACCGGAGGTATACAACTCCATCATCCAGCCCTCG
TCCGCTGCTCCCATTCGCAAAACGAGTCGATTGCAATCGACACTGGATCG
AGAAATTTATTCGAAAGCGCACGACACCTCTTACCTTCAAGCAGCTCAGC
CTGAGGTTTTTGACGGTAAAAACGAGAAACGACCTTCGACAATCTCCATG
ATGCGACGTAACACGTCATCGCTGAAACGTGGTGATATCGCGCGACGGTT
AGCCAGTGAACAAGGCAGTCGTGGCATGCTTAACTTCTCAATACAATATA
AACAAGCAACcgcCAAACTAACAATCATCATATTGAAAGCCGAAGGATTG
CCGGTTCGAAAAGACGGTGAGTTTTGTGATCCGTTTGTTGACATTCAAGT
CAGTCCGTACTACAAGCGTCGAATGCATTCAGAAGTTcatcaaaaaactc
aaaaccCTGTCTTCAACCAATCGTTTGATTCGGAGGTGCCGCCATACGAG
GTCCGTGGTCAAACGATACATTTCACCGTGTTAGATTTTAGTCAGCAGTT
AGCCCACGAACCGATTGGCTCAGTGGCTTTTAAGATGGACAGTTTGGACA
GGGATGCTTTCAACGCGGGCAAAGAATTCACACTGTGGAAGAAAATTGAT
AAGGATGCTTTGGAATCAGGTGATCGACTAGACGGTAAACGCGAATACCC
AATGGAAATGGAGCTAGACAGGACAGCCATGTTGTTACTGCTCAGTGTCA
ATTATTTGAAAATCGCCGAACGATTGACGGTGACGGTGAATAAAGCACGC
AATCTACTACTGGTCGACCGCAAAGGCAAATTAGATGGCATGTCATGCAT
AATCCCTCCTATTAGGACTCCTATTTCGAAACGGAAAAAATCCCGCAAAA
acgggaaaatcggggaaattgaACACGAAGATCTTGAAAATAATAATGAG
AATGGGAAACGAAGTGTACTGGATCATCCGTACGTCCAAGTTACTCTAAA
GCATTTCGGACGCGTGCTCAAAAAATTACGGACAGGCGTGGTGAAACACG
AAACGAATCCTGTATTTAATAAGACTTTATTATTCGATGTTCCAAAGCAC
CTTGTAGACTCTGTATCACTGACAGTAAAATTACGTCATCATAACGAACT
TGGGCGTGACCGGACTTTTGCTATTTTAACGGTGGGTAAAAATGCGGTGG
GGTCCGGTTCGGAGCAATGGACGGATATGTTGAATTCATCGGAGACCGTA
CAACGCTGGCACCGTTTGATACCTATTGAACCGGTTGATGATTAAGGAAA
AGCTTCCAAAACAACTTCAAAGATGGTTGCAACGAAGACCTTACCTCTGG
TGCTGGGGTCCCTCTTGGGAATCATGCTGGCCATTCTGGTGGTCGTTTTG
TTCTTGTTCTACAAAAAGCGAAAGGAGAGCATCGAATTCAGCATACCGTT
GGAGAAGATGACCAGAGGGCTGAAAAGCTCTTTGAAAAGGAGATCAACTT
CGTCGAAGAACAGCAAAAGTAGTAACGACAGTATACACATCAAACCACAA
GGAACGCCAATTTTGAGGGACACTCAATTCTGGGTACCGGAGGTATACAA
CTCCATCATCCAGCCCTCGTCCGCTGCTCCCATTCGCAAAACGAGTCGAT
TGCAATCGACACTGGATCGAGAAATTTATTCGAAAGCGCACGACACCTCT
TACCTTCAAGCAGCTCAGCCTGAGGTTTTTGACGGTAAAAACGAGAAACG
ACCTTCGACAATCTCCATGATGCGACGTAACACGTCATCGCTGAAACGTG
GTGATATCGCGCGACGGTTAGCCAGTGAACAAGGCAGTCGTGGCATGCTT
AACTTCTCAATACAATATAAACAAGCAACcgcCAAACTAACAATCATCAT
ATTGAAAGCCGAAGGATTGCCGGTTCGAAAAGACGGTGAGTTTTGTGATC
CGTTTGTTGACATTCAAGTCAGTCCGTACTACAAGCGTCGAATGCATTCA
GAAGTTcatcaaaaaactcaaaaccCTGTCTTCAACCAATCGTTTGATTC
GGAGGTGCCGCCATACGAGGTCCGTGGTCAAACGATACATTTCACCGTGT
TAGATTTTAGTCAGCAGTTAGCCCACGAACCGATTGGCTCAGTGGCTTTT
AAGATGGACAGTTTGGACAGGGATGCTTTCAACGCGGGCAAAGAATTCAC
ACTGTGGAAGAAAATTGATAAGGATGCTTTGGAATCAGGTGATCGACTAG
ACGGTAAACGCGAATACCCAATGGAAATGGAGCTAGACAGGACAGCCATG
TTGTTACTGCTCAGTGTCAATTATTTGAAAATCGCCGAACGATTGACGGT
GACGGTGAATAAAGCACGCAATCTACTACTGGTCGACCGCAAAGGCAAAT
TAGATGGCATGTCATGCATAATCCCTCCTATTAGGACTCCTATTTCGAAA
CGGAAAAAATCCCGCAAAAacgggaaaatcggggaaattgaACACGAAGA
TCTTGAAAATAATAATGAGAATGGGAAACGAAGTGTACTGGATCATCCGT
ACGTCCAAGTTACTCTAAAGCATTTCGGACGCGTGCTCAAAAAATTACGG
ACAGGCGTGGTGAAACACGAAACGAATCCTGTATTTAATAAGACTTTATT
ATTCGATGTTCCAAAGCACCTTGTAGACTCTGTATCACTGACAGTAAAAT
TACGTCATCATAACGAACTTGGGCGTGACCGGACTTTTGCTATTTTAACG
GTGGGTAAAAATGCGGTGGGGTCCGGTTCGGAGCAATGGACGGATATGTT
GAATTCATCGGAGACCGTACAACGCTGGCACCGTTTGATACCTATTGAAC
CGGTTGATGATTAAGGAAAAGCTTCCAAAACAACTTCAAAGATGGTTGCA
ACGAAGACCTTACCTCTGGTGCTGGGGTCCCTCTTGGGAATCATGCTGGC
CATTCTGGTGGTCGTTTTGTTCTTGTTCTACAAAAAGCGAAAGGAGAGCA
TCGAATTCAGCATACCGTTGGAGAAGATGACCAGAGGGCTGAAAAGCTCT
TTGAAAAGGAGATCAACTTCGTCGAAGAACAGCAAAAGTAGTAACGACAG
TATACACATCAAACCACAAGGAACGCCAATTTTGAGGGACACTCAATTCT
GGGTACCGGAGGTATACAACTCCATCATCCAGCCCTCGTCCGCTGCTCCC
ATTCGCAAAACGAGTCGATTGCAATCGACACTGGATCGAGAAATTTATTC
GAAAGCGCACGACACCTCTTACCTTCAAGCAGCTCAGCCTGAGGTTTTTG
ACGGTAAAAACGAGAAACGACCTTCGACAATCTCCATGATGCGACGTAAC
ACGTCATCGCTGAAACGTGGTGATATCGCGCGACGGTTAGCCAGTGAACA
AGGCAGTCGTGGCATGCTTAACTTCTCAATACAATATAAACAAGCAACcg
cCAAACTAACAATCATCATATTGAAAGCCGAAGGATTGCCGGTTCGAAAA
GACGGTGAGTTTTGTGATCCGTTTGTTGACATTCAAGTCAGTCCGTACTA
CAAGCGTCGAATGCATTCAGAAGTTcatcaaaaaactcaaaaccCTGTCT
TCAACCAATCGTTTGATTCGGAGGTGCCGCCATACGAGGTCCGTGGTCAA
ACGATACATTTCACCGTGTTAGATTTTAGTCAGCAGTTAGCCCACGAACC
GATTGGCTCAGTGGCTTTTAAGATGGACAGTTTGGACAGGGATGCTTTCA
ACGCGGGCAAAGAATTCACACTGTGGAAGAAAATTGATAAGGATGCTTTG
GAATCAGGTGATCGACTAGACGGTAAACGCGAATACCCAATGGAAATGGA
GCTAGACAGGACAGCCATGTTGTTACTGCTCAGTGTCAATTATTTGAAAA
TCGCCGAACGATTGACGGTGACGGTGAATAAAGCACGCAATCTACTACTG
GTCGACCGCAAAGGCAAATTAGATGGCATGTCATGCATAATCCCTCCTAT
TAGGACTCCTATTTCGAAACGGAAAAAATCCCGCAAAAacgggaaaatcg
gggaaattgaACACGAAGATCTTGAAAATAATAATGAGAATGGGAAACGA
AGTGTACTGGATCATCCGTACGTCCAAGTTACTCTAAAGCATTTCGGACG
CGTGCTCAAAAAATTACGGACAGGCGTGGTGAAACACGAAACGAATCCTG
TATTTAATAAGACTTTATTATTCGATGTTCCAAAGCACCTTGTAGACTCT
GTATCACTGACAGTAAAATTACGTCATCATAACGAACTTGGGCGTGACCG
GACTTTTGCTATTTTAACGGTGGGTAAAAATGCGGTGGGGTCCGGTTCGG
AGCAATGGACGGATATGTTGAATTCATCGGAGACCGTACAACGCTGGCAC
CGTTTGATACCTATTGAACCGGTTGATGATTAAGGAAAAGCTTCCAAAAC
AACTTCAAAGATGGTTGCAACGAAGACCTTACCTCTGGTGCTGGGGTCCC
TCTTGGGAATCATGCTGGCCATTCTGGTGGTCGTTTTGTTCTTGTTCTAC
AAAAAGCGAAAGGAGAGCATCGAATTCAGCATACCGTTGGAGAAGATGAC
CAGAGGGCTGAAAAGCTCTTTGAAAAGGAGATCAACTTCGTCGAAGAACA
GCAAAAGTAGTAACGACAGTATACACATCAAACCACAAGGAACGCCAATT
TTGAGGGACACTCAATTCTGGGTACCGGAGGTATACAACTCCATCATCCA
GCCCTCGTCCGCTGCTCCCATTCGCAAAACGAGTCGATTGCAATCGACAC
TGGATCGAGAAATTTATTCGAAAGCGCACGACACCTCTTACCTTCAAGCA
GCTCAGCCTGAGGTTTTTGACGGTAAAAACGAGAAACGACCTTCGACAAT
CTCCATGATGCGACGTAACACGTCATCGCTGAAACGTGGTGATATCGCGC
GACGGTTAGCCAGTGAACAAGGCAGTCGTGGCATGCTTAACTTCTCAATA
CAATATAAACAAGCAACcgcCAAACTAACAATCATCATATTGAAAGCCGA
AGGATTGCCGGTTCGAAAAGACGGTGAGTTTTGTGATCCGTTTGTTGACA
TTCAAGTCAGTCCGTACTACAAGCGTCGAATGCATTCAGAAGTTcatcaa
aaaactcaaaaccCTGTCTTCAACCAATCGTTTGATTCGGAGGTGCCGCC
ATACGAGGTCCGTGGTCAAACGATACATTTCACCGTGTTAGATTTTAGTC
AGCAGTTAGCCCACGAACCGATTGGCTCAGTGGCTTTTAAGATGGACAGT
TTGGACAGGGATGCTTTCAACGCGGGCAAAGAATTCACACTGTGGAAGAA
AATTGATAAGGATGCTTTGGAATCAGGTGATCGACTAGACGGTAAACGCG
AATACCCAATGGAAATGGAGCTAGACAGGACAGCCATGTTGTTACTGCTC
AGTGTCAATTATTTGAAAATCGCCGAACGATTGACGGTGACGGTGAATAA
AGCACGCAATCTACTACTGGTCGACCGCAAAGGCAAATTAGATGGCATGT
CATGCATAATCCCTCCTATTAGGACTCCTATTTCGAAACGGAAAAAATCC
CGCAAAAacgggaaaatcggggaaattgaACACGAAGATCTTGAAAATAA
TAATGAGAATGGGAAACGAAGTGTACTGGATCATCCGTACGTCCAAGTTA
CTCTAAAGCATTTCGGACGCGTGCTCAAAAAATTACGGACAGGCGTGGTG
AAACACGAAACGAATCCTGTATTTAATAAGACTTTATTATTCGATGTTCC
AAAGCACCTTGTAGACTCTGTATCACTGACAGTAAAATTACGTCATCATA
ACGAACTTGGGCGTGACCGGACTTTTGCTATTTTAACGGTGGGTAAAAAT
GCGGTGGGGTCCGGTTCGGAGCAATGGACGGATATGTTGAATTCATCGGA
GACCGTACAACGCTGGCACCGTTTGATACCTATTGAACCGGTTGATGATT
AA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_040916	XLOC_040916	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00065256-protein	TCONS_00065256-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_435	supercontig	scaffold_435:123574..129024 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.21156	0.325273	0.713011	0.516256	13.025	7.30015	6.50457	6.80673	2.43765	4.95626	1.02421	1.79972	9.53505	6.55219	3.2209	3.31871	16.2793	16.6874	13.5301	15.8745	16.825	13.6993	7.84466	10.3234	12.344	12.8871	9.87389	5.46934	1.09518	2.44029

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

Blast

[Close]

BLAST of TCONS_00065256 vs. Swiss-Prot (Human)
Match: SYT3 (Synaptotagmin-3 OS=Homo sapiens GN=SYT3 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.131e-35
Identity = 98/335 (29.25%), Postives = 156/335 (46.57%), Query Frame = 3

Query:  549 GMLNFSIQYKQATAKLTIIILKAEGLPVRKDGEFCDPFVDIQVSPYYKRRMHSEVHQKTQNPVFNQSFDSEVPPYEVRGQTIHFTVLDFSQQLAHEPIGSVAFKMDSLDRDAFNAGKEFTLWKKIDKDALESGDRLDGKREYPMEMELDRTAMLLLLSVNYLKIAERLTVTVNKARNLLLVDRKGKLDGMSCIIPPIRTPISKRKKSRKNGKIGEIEHEDLENNNENGKRSVLDHPYVQVTLKHFGRVLKKLRTGVVKHETNPVFNKTLLFDVPKHLVDSVSLTVKLRHHNELGRDRTFAILTVGKNAVGS-GSEQWTDML-NSSETVQRWHRLI 1547
            G ++F+++Y   + +L + IL+A  LP +    F DP+V I + P  K++  ++VH+KT NPVFN++F   VP  E+  + +HF+V DF +   H+ IG V   +D+L   A     +  LW+ I +   E  D  +                 L  S+ YL  A RLTVT+ KA NL  +D  G  D                                               PYV+ +L   GR LKK +T + K+  NP +N+ L+FDV    V++V L++ +  ++ +G +    +  VG +A    G E W +ML N  + V+ WH+L+
Sbjct:  301 GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPVFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVV--LDNLLELA-EQPPDRPLWRDIVEGGSEKADLGE-----------------LNFSLCYLPTAGRLTVTIIKASNLKAMDLTGFSD-----------------------------------------------PYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPDAADPHGREHWAEMLANPRKPVEHWHQLV 568

The following BLAST results are available for this feature:

BLAST of TCONS_00065256 vs. Swiss-Prot (Human)

BLAST of TCONS_00065256 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SYT3	2.131e-35	29.25	Synaptotagmin-3 OS=Homo sapiens GN=SYT3 PE=2 SV=1	[more]

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TCONS_00065256 (transcript) - C. hemisphaerica