TCONS_00065252 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065252
Unique NameTCONS_00065252
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1492

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065252 ID=TCONS_00065252|Name=TCONS_00065252|organism=Clytia hemisphaerica|type=transcript|length=1492bp
GATAAAACAGTAAAtagaaactttaaaatgagTGAAATCACATTATTTCA
TGGAAAAGATGAAAAAACTTCAGTTTCTGTGCATACTTGTGGTGCAACAG
TTACATCTTGGAAAATTAATGGTcaagaaaagatttttgttaGCACTCTT
GCTAAACGTGATGGAAGCAAAGCTATAAGAGGTGGAATTCCTTTATGTTT
TCCACAATTTGGTCCATGGGATAGTGGCAGACCACAGCATGGTTTTGCAA
GGAACTCAAACGATTgggttttgaaagaaaagaaagtggACACGAATGGA
GATGCAACAATTGTTATGGTGCTTACTGACAATGAAAACACAAGAAAATT
ATGGGATTTCAAATTCACGTTTTTGTATACCGTCAAGCTTACTCTGACTG
AATTGACATTAAATGCAAGCGTGGAGAACAGAAGCGACAGTGACTTTGAT
CTGACATTTTGCTTTCACACTTATTTGAAAGTTCCTCAAATATCTGGTGC
CACAGTTCAAGGGCTGAATGGATTAACTTATGTGGACAAAACAGAAGGAG
GTCAACTAACAATAgaagaaaatgacgtcattaagaTTGAAGGATTTGTA
GATCGTGTCTATCAAGATGCACCTGACGTAGTGGTGGTTCAATTGCATGA
CAAAGAGAAAATCACTCTCAAAAAAAACAACCTTTGTGATTACGTTGTTT
GGAATCCATGGCAACAGAATTGTTTAAAGATGGCTGACATGGATGATGAG
GGTTATTTGAGCATGATTTGCGTGGAAGCCGCGCATGCGTCGAAGAGAAG
TATCGTTAAAGCAGGTTCCACTTGGAACGCATCTCATGTTTTATCGAGTA
GTCAGTAAATTTATAGATCTGTGAATACCTTGCACAGCACATCCATCTCG
CACGATTTTGTGTTTTAAATCGTACAAGTAAGGGTTATGTTGTAGTACAC
TTTTTCGTTCAAAACATCTCACTCTATCCGATAGTCTTAatcattttgtc
aaatttgacaACCTTCCATTTCTAGTCACTTTTTACTCTCACTGCAGTTT
TCACTGTAACGTCAGTATTCTGGCCATAAAAAGTTTTGCTGGACCTGCAT
TGAGTTAGCCATAAAGAATTCCCCTTGGTATGACCGGTTCTTACTAAGGA
ATAGCCTCAATTACATTCTTCAAATCCTTTTATTTAAACGTATAGACGTT
AGATGAACAATGGAACGCCCTTTGACAGTTGGGGAAATCTGTGTGATGGT
TAAATCGTTTTGAGAGCTGATTGTTTTCTTTCATTATCCTgttttttaca
atttatttattttgattgcACTTTTCTGCATTTATTTATTTGCACTGATA
CACGAtcacttttgaatcactttttttttgggagatcttttttaattcga
aaataattttcttgtaTAGTATTTTTGGTATAGATGATTGATATGTTTTT
tacgtcattttgaaaatataaaggAATAAAATAAGATAAATC
Run BLAST on NCBI

protein sequence of TCONS_00065252-protein

>TCONS_00065252-protein ID=TCONS_00065252-protein|Name=TCONS_00065252-protein|organism=Clytia hemisphaerica|type=polypeptide|length=285bp
DKTVNRNFKMSEITLFHGKDEKTSVSVHTCGATVTSWKINGQEKIFVSTL
AKRDGSKAIRGGIPLCFPQFGPWDSGRPQHGFARNSNDWVLKEKKVDTNG
DATIVMVLTDNENTRKLWDFKFTFLYTVKLTLTELTLNASVENRSDSDFD
LTFCFHTYLKVPQISGATVQGLNGLTYVDKTEGGQLTIEENDVIKIEGFV
DRVYQDAPDVVVVQLHDKEKITLKKNNLCDYVVWNPWQQNCLKMADMDDE
GYLSMICVEAAHASKRSIVKAGSTWNASHVLSSSQ
Run BLAST on NCBI

transcript from alignment at scaffold_435:52240..59590+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065252 ID=TCONS_00065252|Name=TCONS_00065252|organism=Clytia hemisphaerica|type=transcript|length=7351bp|location=Sequence derived from alignment at scaffold_435:52240..59590+ (Clytia hemisphaerica)
GATAAAACAGTAAAtagaaactttaaaatgagTGAAATCACATTATTTCA
TGGAAAAGATGAAAAAACTTCAGTTTCTGTGCATACTTGTGGTGCAACAG
TTACATCTTGGAAAATTAATGGTcaagaaaagatttttgttaGCACTCTT
GCTAAACGTGATGGAAGCAAAGCTATAAGGTATTTCATAATATTACAAAC
ATTTCAATCAGCTTcggcaaaattaatttttactgTAGAAAACTAGACAA
ATAGTATTGGTTATCgggcattttgttttgaaagttgatgTTGTGGGAAC
GTTTACGTCAAAAAGGTGATGAAAGGAGTCGGTTTATCGTATGACGTCAA
AATATCAAAGTCTTTTTATTGGAGTGCTGACAGATCGAAATACATACGTA
TTTAGTGTCATTCAACTCCAATAGACTCTGACTCAACCCCCTTTGGTTTT
ATGAGTTATAAAAGCAACATTATTGACGATCAGATATTGTTAATCCTTAT
CTATAATATACCTTAAGCGAATTATTTTTTGCGGGGTTAAATTTGACGAA
TTTATCCTGGTCAAAACTTTTGGCTGATCGCCAAATTTAGTccacgcaaa
aattaatccactatGAAATTATAGTAAAAATCAATCAACGATACCAATAT
TGTTTTTCAGAGGTGGAATTCCTTTATGTTTTCCACAATTTGGTCCATGG
GATAGTGGCAGACCACAGCATGGTTTTGCAAGGAACTCAAACGATTgggt
tttgaaagaaaagaaagtggACACGAATGGAGATGCAACAGTGAGTGGCT
TTATTTAAACTCTTAGTAGTTTATTTTAAAAGTGATGTTGCTTTTGTCAA
TGTTGTGCGTGTCTTAATGCTCACTTATGTTATTTGCTTGATAAAGCCTT
GTCAGGAAAAAGTAAGTCGAAATCCCACTCAACAAAAAGTGCACACCCTT
GGAAGATGTTGAAGAAAGAAAGCTTTTTATAATCGATCATGCCATGGTAT
Ngggggcttacatatattgtagattattttccagcactcttatgaaattt
ggtctgcatgaaaagaagttctttattttcactaaaaagtggtattctAT
TTATCATTAAAAAGGAGGTGTCAAGAAgggggggatcatttaagaagggg
cgGTCAGACCCCTTTCTGCACTATGAATCCCCTCAACAAAAAGTGCCCAC
CCTTGGAAGTTATTGAAGAAAGGAGTTGAAGAAAGAAAGCTTTTTATAAT
CAATCATGTCATGGTATATCCTCATCAACCTTCCATGACCCCCCTAAACC
TTAATTTAATATGAAAACAGTCAGTTTTCCAATCCAAGAGACAAAGTTTT
TATCTTCCTCTCCATTCAGACATGACTATTGGCTTTTCTGTTTAGATTGT
TATGGTGCTTACTGACAATGAAAACACAAGAAAATTATGGGATTTCAAAT
TCACGTTTTTGTATACCGTCAAGCTTACTCTGACTGAATTGACATTAAAT
GCAAGCGTGGAGAACAGAAGCGACAGTGACTTTGATCTGACATTTTGCTT
TCACACTTATTTGAAAGTTCCTCAAATATCTGGTGCCACAGTTCAAGGTG
AGATTCACAGAACTCTAAAATAAGGACTGGAACAAAATGGTTTTCAAATA
AAgataaaagtttcaaaagattatatttccatttttgatactttttaatg
atccattatttttcagaaaagCAAGTTTTTTTGCTGTTATTCATTCTGGT
GttgatttttgagtttttgttaaaagtctcaattaaaaaaaagattactC
TATTTATTTGTGACCTGCTAGTGTCTTTGAGGTTTTATCGATCAAAAACC
TAAATTTATGTAGTTTCAATTTTGGCTTTACTCAGCTGGTTACATGTGAA
AGTGGAAGTGAGATTGGTGTATGCTTTAGATTAACGGCAAGCTTTGATTT
ACACCAACCATTTTTACGCTCATTTGCAGCATTGTTAGATGTGTGTAGCA
TTTGTAAACAGCTTAACTATCGAGCATTTGCAGTCTgtttatttcaaaaa
gaaaatcgctCAAAGTTAAAGCATCATGCACGGAGAAGAATATTGTCAAA
TAAATCATCAAAATGCAGTGGTTTTAACTCCTGGAAATCTGTCTagtgga
aatattttttaagtatttttgtcaCACTCAATAAAccttgaaagaagaaa
attcgttAATTAAACTCAACGTCACTGTCCATATTCACCAACGTCCCGTC
CATATTCACCGACGTTCCGTCCATATTCACCGACGTCGATTTCACACTGA
AAATGACATTCGATGAGACGACGTGGCTTAATGATTCGTCTCCTGTCTCC
CCAATCAAAGAACCCTGGAGCAATCACGATGCAGTCGATGCACCTCTATG
TAAACAATGTGAAAACTTGAATCTTGCATTTCTGGATCCGAATTGTAAAG
GATGTTATAGATTGATAATCGATCCTAAAACGAGCATTGCTCAATTGTTT
GCCATCATACGACAATGGGTTCCACAAGTACAGAAAAATATGGATCTACT
CGTCACAGAAATCCTCAAAAGAGGTTTAAATATAAACGATCGAGATAACC
TGACCGACATGACTCTGTTGCATTACGTTGCGAAAGCAGGAGCTGATGGA
ATGTCTGATCCTCAAAGGACAGCTGAACTGACCAGTTCTTTGATCAATAA
AGGGATTCTGATCAATGCAAAATGTCAATGGACAGATATGTCAGCTTTGC
ATTATGCAGTATTCTTTGATGCTTACTCTGTTGTGAAAGTCATCCTTGAC
AACGAGTCGTTTAATGATTTGGACAGACCTTGTAAGGAGTATAATGGTGG
AAGTGTTTTGCATATTGGGTGTCAGAATCTGAGCTTCAAATCTGTTTCAT
TGCTACTTGAGAACAGTTCCAATCCTCATTTTGTGGATGAAAGTGGGAAG
AAACCGATTGATTACATACCCAATGAAgacgaaattgaaaatgaagatgt
aaAGAAGATCGCTTCACTCATGAGAGATGAACTGACTGTAGCTATGCAAA
ATATTGATCCACAATTCAAACAGAATTTAAACCACGCCGTACTAAAAGCA
TTAGGGTTAGATTTACATAGTCGGGTTATTGTTGCTGGCAAAGTTGGATT
ACTTAGATTCGCAGGATCAACTGAATTTGCATCAGGTGTATGGGGCGGTA
TAGAACTCGAAGAAAAGACTGCTAAAAATGATGGTAGTGTGGCTGGGGTG
CAATACTTCCAATGTAAACCGAACCATGGTATTTTTACGCCGTTAACGCT
AGTCAAGAAATTTGATGTAGACTATTTACTAGTCTCTCCTTCTCCTCCCG
CGTCACCAGTACCTGCGAACACATCTGCATCCTTCGATAATGTTGCAATG
TTTGGTTTGACGCTTGGAGAAAAGGTCATTGTTGCCGGTCAGAAGACCGG
ATTTGTTCGATACCGTGGACCAACAAAGTTCTCCCCGGGTACTTGGGTTG
GCGTTGAACTTGAAGATCCCGTTGGGAAAAATGATGGCTCGGTAGGAGAC
TTTCGTTACTTTCGATGTGAGCCTGATCGTGGTATATTCGCTCCACTTCC
TCAGATACAAAGGATAGAGGAGGTTATCGAGGAAGAATGTAGTTCAATCG
AAATACCGAACaccatcaaaaaatttcaaatgaagAAGCGGATTGAGGGA
GAtggagagaaaaagaaaatattcttgaaattaGATTTGAAGTCCATTAC
ACCTCAAGAAGACATTGAAGAGGAGAACGACCGAGACTCACTTGAAGAGA
GTgaacaaaaatcaaatgaaaaacgTAAACACTCCAGGATCAATCCTGGT
GTTAGTGCAAACATTCAACAGCTCAGCCAACCGAAGAGAAATCACCAAAA
ACTTGACCGAACCTTGGGCGCTCAAATTAACTTCACTTTAAAGACGGGGA
TGAGTGTTTATCTTAATGGACAACTTGGTTTAGTTAGATTCATTGGACGT
GTTGAATTCGCCAAAGGCGTTTGGTTGGGCGTTGAATTGAGAAAGCCTTA
CGGGAAGAACGACGGGTCAGTTGAAGGGCGCCGGTATTTTACGTGTGAAC
AGAATTACGGTTTAATGACACGCCCATCAAGGGCGACATGCCGTGGTATC
AATTGTGAACAGTTAATCGACCTCAAATTCAGATGATCTCCTCTCACCAA
CGCCAAAGCTGAACGTATTTAGCTGTTTCGTTGTTTCGTTGAGTCCACAT
TTAATACGAACGACAATGATTCCATACTAAGAATATTATTATTGTTCACT
TGAATGGTGACCCTCCTCATTTAGCCGTTAATATTAATAAAgcttttcta
gttttttttatgaacatgTTTTGTATATCATAACGATGAACCTATAATAT
CTTACAATCTTAAACAATATATTACAATCACTTCAAAGTTGGTCAGTACG
AACTATCCATCTTGACTGACGTCAAGAGGTCTGGATTCGATTCTCAATTG
TTTTTGTCATTCGTTTTGAAGCTTTAATGCACCCTTGTCCCTGCCAATCT
ATTCCGTTGGAAAAGATAGGTTTGCAATAACTCTGTCCTGTCGGTGATTG
GGCTATGTATGTGTTGGTTGCGAAATTCATCTTGAATGATGCGAAAGTGA
ATAAGCTTAAACTTGTCTATGCATATTTTACGCCTCCATTTAAAAGTCAC
ACATCAGTGTCTCGGCAGTTTTAACCGTCGCAGTGACGTCTCTAATTAAC
TATACGACTCGTAGACGGCTGATGAGAAACCTCGAACCCTCTTAAAAATG
AATCCTTACCCATAaatggatttctttttttacagGGCTGAATGGATTAA
CTTATGTGGACAAAACAGAAGGAGGTCAACTAACAATAgaagaaaatgac
gtcattaagaTTGAAGGATTTGTAGATCGTGTCTATCAAGATGCACCTGA
CGTAGTGGTGGTTCAATTGCATGACAAAGAGAAAATCACTCTCAAAAAAG
TATGTACTTTCATTACAATTTTCACGTTCTCGGGTCTTGTTTTTCCGAGT
TAAAGAttgcattttttgttttcaattattcaAACTGGCTGAAGAACTTT
GTATTGAAGCACTGACGTGGTTAAGTGGCGATGGTCTTCTTTCgattctt
tgccacggaaattcatgtgacatcttttttaaccaataagatttaataat
ttcgagggtaaaacaaacactatggtttaactcactaaaagattatgttt
acCGGAAACACATAATcaatctttagtaagtgttctgttgtaccccagtt
ctgacgtcatgccgTGACGAAGAATAGCTATCTAGTCAAATGTAGAATCT
GAAGGTAACCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCA
CCACTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCACTC
TTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTC
CCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCC
TGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACC
CCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTT
CTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCC
TCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTG
CACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCAC
TCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCT
TCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTC
CCTGCACCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCA
CCCCTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTC
TTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTC
CCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCC
TGCACCACTCTTCTTCCCTCCCTGCACCCCTCTTCTTCCCTCCCTGCACC
ACTCTTCTTCCCTCCCTGCACCACTCTTCTTCCCTCCCTGCACCACTCTT
CTTCCCTCCCTGCACCACTCTTCTTCCCTCAATTGGAGCACTGAAACAAG
AATTTGTAAATACGATCGTTTGATATTTTGTACCCTAACCATGACCAGAA
TAACATAACCCCTTCTGTCTCATTTTTACTGATTCTCACCAATCAGATTT
CTTGCTTGTGCGAGTTTCGAACAACGTGGCTCGACACTAAACAGTACGTA
ACTATAGAATGAAAGCTTTTCAGAATGATGTCTTTTAGAAGGCGCACGAC
GTACCGAACAAAGCGTCAATGAGTGTTTCTCGTTTTACATCTGCTGATAT
TCAGCTTTACAAGAATTTGCTTTCTTCGTTACAGAACAACCTTTGTGATT
ACGTTGTTTGGAATCCATGGCAACAGAATTGTTTAAAGATGGCTGACATG
GATGATGAGGGTTATTTGAGCATGATTTGCGTGGAAGCCGCGCATGCGTC
GAAGAGAAGTATCGTTAAAGCAGGTTCCACTTGGAACGCATCTCATGTTT
TATCGAGTAGTCAGTAAATTTATAGATCTGTGAATACCTTGCACAGCACA
TCCATCTCGCACGATTTTGTGTTTTAAATCGTACAAGTAAGGGTTATGTT
GTAGTACACTTTTTCGTTCAAAACATCTCACTCTATCCGATAGTCTTAat
cattttgtcaaatttgacaACCTTCCATTTCTAGTCACTTTTTACTCTCA
CTGCAGTTTTCACTGTAACGTCAGTATTCTGGCCATAAAAAGTTTTGCTG
GACCTGCATTGAGTTAGCCATAAAGAATTCCCCTTGGTATGACCGGTTCT
TACTAAGGAATAGCCTCAATTACATTCTTCAAATCCTTTTATTTAAACGT
ATAGACGTTAGATGAACAATGGAACGCCCTTTGACAGTTGGGGAAATCTG
TGTGATGGTTAAATCGTTTTGAGAGCTGATTGTTTTCTTTCATTATCCTg
ttttttacaatttatttattttgattgcACTTTTCTGCATTTATTTATTT
GCACTGATACACGAtcacttttgaatcactttttttttgggagatctttt
ttaattcgaaaataattttcttgtaTAGTATTTTTGGTATAGATGATTGA
TATGTTTTTtacgtcattttgaaaatataaaggAATAAAATAAGATAAAT
C

Coding sequence (CDS) from alignment at scaffold_435:52240..59590+

>TCONS_00065252 ID=TCONS_00065252|Name=TCONS_00065252|organism=Clytia hemisphaerica|type=CDS|length=4290bp|location=Sequence derived from alignment at scaffold_435:52240..59590+ (Clytia hemisphaerica)
GATAAAACAGTAAAtagaaactttaaaatgagTGAAATCACATTATTTCA
TGGAAAAGATGAAAAAACTTCAGTTTCTGTGCATACTTGTGGTGCAACAG
TTACATCTTGGAAAATTAATGGTcaagaaaagatttttgttaGCACTCTT
GCTAAACGTGATGGAAGCAAAGCTATAAGAGGTGGAATTCCTTTATGTTT
TCCACAATTTGGTCCATGGGATAGTGGCAGACCACAGCATGGTTTTGCAA
GGAACTCAAACGATTgggttttgaaagaaaagaaagtggACACGAATGGA
GATGCAACAATTGTTATGGTGCTTACTGACAATGAAAACACAAGAAAATT
ATGGGATTTCAAATTCACGTTTTTGTATACCGTCAAGCTTACTCTGACTG
AATTGACATTAAATGCAAGCGTGGAGAACAGAAGCGACAGTGACTTTGAT
CTGACATTTTGCTTTCACACTTATTTGAAAGTTCCTCAAATATCTGGTGC
CACAGTTCAAGGGCTGAATGGATTAACTTATGTGGACAAAACAGAAGGAG
GTCAACTAACAATAgaagaaaatgacgtcattaagaTTGAAGGATTTGTA
GATCGTGTCTATCAAGATGCACCTGACGTAGTGGTGGTTCAATTGCATGA
CAAAGAGAAAATCACTCTCAAAAAAAACAACCTTTGTGATTACGTTGTTT
GGAATCCATGGCAACAGAATTGTTTAAAGATGGCTGACATGGATGATGAG
GGTTATTTGAGCATGATTTGCGTGGAAGCCGCGCATGCGTCGAAGAGAAG
TATCGTTAAAGCAGGTTCCACTTGGAACGCATCTCATGTTTTATCGAGTA
GTCAGTAAGATAAAACAGTAAAtagaaactttaaaatgagTGAAATCACA
TTATTTCATGGAAAAGATGAAAAAACTTCAGTTTCTGTGCATACTTGTGG
TGCAACAGTTACATCTTGGAAAATTAATGGTcaagaaaagatttttgtta
GCACTCTTGCTAAACGTGATGGAAGCAAAGCTATAAGAGGTGGAATTCCT
TTATGTTTTCCACAATTTGGTCCATGGGATAGTGGCAGACCACAGCATGG
TTTTGCAAGGAACTCAAACGATTgggttttgaaagaaaagaaagtggACA
CGAATGGAGATGCAACAATTGTTATGGTGCTTACTGACAATGAAAACACA
AGAAAATTATGGGATTTCAAATTCACGTTTTTGTATACCGTCAAGCTTAC
TCTGACTGAATTGACATTAAATGCAAGCGTGGAGAACAGAAGCGACAGTG
ACTTTGATCTGACATTTTGCTTTCACACTTATTTGAAAGTTCCTCAAATA
TCTGGTGCCACAGTTCAAGGGCTGAATGGATTAACTTATGTGGACAAAAC
AGAAGGAGGTCAACTAACAATAgaagaaaatgacgtcattaagaTTGAAG
GATTTGTAGATCGTGTCTATCAAGATGCACCTGACGTAGTGGTGGTTCAA
TTGCATGACAAAGAGAAAATCACTCTCAAAAAAAACAACCTTTGTGATTA
CGTTGTTTGGAATCCATGGCAACAGAATTGTTTAAAGATGGCTGACATGG
ATGATGAGGGTTATTTGAGCATGATTTGCGTGGAAGCCGCGCATGCGTCG
AAGAGAAGTATCGTTAAAGCAGGTTCCACTTGGAACGCATCTCATGTTTT
ATCGAGTAGTCAGTAAGATAAAACAGTAAAtagaaactttaaaatgagTG
AAATCACATTATTTCATGGAAAAGATGAAAAAACTTCAGTTTCTGTGCAT
ACTTGTGGTGCAACAGTTACATCTTGGAAAATTAATGGTcaagaaaagat
ttttgttaGCACTCTTGCTAAACGTGATGGAAGCAAAGCTATAAGAGGTG
GAATTCCTTTATGTTTTCCACAATTTGGTCCATGGGATAGTGGCAGACCA
CAGCATGGTTTTGCAAGGAACTCAAACGATTgggttttgaaagaaaagaa
agtggACACGAATGGAGATGCAACAATTGTTATGGTGCTTACTGACAATG
AAAACACAAGAAAATTATGGGATTTCAAATTCACGTTTTTGTATACCGTC
AAGCTTACTCTGACTGAATTGACATTAAATGCAAGCGTGGAGAACAGAAG
CGACAGTGACTTTGATCTGACATTTTGCTTTCACACTTATTTGAAAGTTC
CTCAAATATCTGGTGCCACAGTTCAAGGGCTGAATGGATTAACTTATGTG
GACAAAACAGAAGGAGGTCAACTAACAATAgaagaaaatgacgtcattaa
gaTTGAAGGATTTGTAGATCGTGTCTATCAAGATGCACCTGACGTAGTGG
TGGTTCAATTGCATGACAAAGAGAAAATCACTCTCAAAAAAAACAACCTT
TGTGATTACGTTGTTTGGAATCCATGGCAACAGAATTGTTTAAAGATGGC
TGACATGGATGATGAGGGTTATTTGAGCATGATTTGCGTGGAAGCCGCGC
ATGCGTCGAAGAGAAGTATCGTTAAAGCAGGTTCCACTTGGAACGCATCT
CATGTTTTATCGAGTAGTCAGTAAGATAAAACAGTAAAtagaaactttaa
aatgagTGAAATCACATTATTTCATGGAAAAGATGAAAAAACTTCAGTTT
CTGTGCATACTTGTGGTGCAACAGTTACATCTTGGAAAATTAATGGTcaa
gaaaagatttttgttaGCACTCTTGCTAAACGTGATGGAAGCAAAGCTAT
AAGAGGTGGAATTCCTTTATGTTTTCCACAATTTGGTCCATGGGATAGTG
GCAGACCACAGCATGGTTTTGCAAGGAACTCAAACGATTgggttttgaaa
gaaaagaaagtggACACGAATGGAGATGCAACAATTGTTATGGTGCTTAC
TGACAATGAAAACACAAGAAAATTATGGGATTTCAAATTCACGTTTTTGT
ATACCGTCAAGCTTACTCTGACTGAATTGACATTAAATGCAAGCGTGGAG
AACAGAAGCGACAGTGACTTTGATCTGACATTTTGCTTTCACACTTATTT
GAAAGTTCCTCAAATATCTGGTGCCACAGTTCAAGGGCTGAATGGATTAA
CTTATGTGGACAAAACAGAAGGAGGTCAACTAACAATAgaagaaaatgac
gtcattaagaTTGAAGGATTTGTAGATCGTGTCTATCAAGATGCACCTGA
CGTAGTGGTGGTTCAATTGCATGACAAAGAGAAAATCACTCTCAAAAAAA
ACAACCTTTGTGATTACGTTGTTTGGAATCCATGGCAACAGAATTGTTTA
AAGATGGCTGACATGGATGATGAGGGTTATTTGAGCATGATTTGCGTGGA
AGCCGCGCATGCGTCGAAGAGAAGTATCGTTAAAGCAGGTTCCACTTGGA
ACGCATCTCATGTTTTATCGAGTAGTCAGTAAGATAAAACAGTAAAtaga
aactttaaaatgagTGAAATCACATTATTTCATGGAAAAGATGAAAAAAC
TTCAGTTTCTGTGCATACTTGTGGTGCAACAGTTACATCTTGGAAAATTA
ATGGTcaagaaaagatttttgttaGCACTCTTGCTAAACGTGATGGAAGC
AAAGCTATAAGAGGTGGAATTCCTTTATGTTTTCCACAATTTGGTCCATG
GGATAGTGGCAGACCACAGCATGGTTTTGCAAGGAACTCAAACGATTggg
ttttgaaagaaaagaaagtggACACGAATGGAGATGCAACAATTGTTATG
GTGCTTACTGACAATGAAAACACAAGAAAATTATGGGATTTCAAATTCAC
GTTTTTGTATACCGTCAAGCTTACTCTGACTGAATTGACATTAAATGCAA
GCGTGGAGAACAGAAGCGACAGTGACTTTGATCTGACATTTTGCTTTCAC
ACTTATTTGAAAGTTCCTCAAATATCTGGTGCCACAGTTCAAGGGCTGAA
TGGATTAACTTATGTGGACAAAACAGAAGGAGGTCAACTAACAATAgaag
aaaatgacgtcattaagaTTGAAGGATTTGTAGATCGTGTCTATCAAGAT
GCACCTGACGTAGTGGTGGTTCAATTGCATGACAAAGAGAAAATCACTCT
CAAAAAAAACAACCTTTGTGATTACGTTGTTTGGAATCCATGGCAACAGA
ATTGTTTAAAGATGGCTGACATGGATGATGAGGGTTATTTGAGCATGATT
TGCGTGGAAGCCGCGCATGCGTCGAAGAGAAGTATCGTTAAAGCAGGTTC
CACTTGGAACGCATCTCATGTTTTATCGAGTAGTCAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040913XLOC_040913Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065252-proteinTCONS_00065252-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065252-exon-scaffold_435-1491911889:52240..52418TCONS_00065252-exon-scaffold_435-1491911889:52240..52418Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1510915933:52240..52418TCONS_00065252-exon-scaffold_435-1510915933:52240..52418Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1575043694:52240..52418TCONS_00065252-exon-scaffold_435-1575043694:52240..52418Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1491911889:52900..53029TCONS_00065252-exon-scaffold_435-1491911889:52900..53029Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1510915933:52900..53029TCONS_00065252-exon-scaffold_435-1510915933:52900..53029Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1575043694:52900..53029TCONS_00065252-exon-scaffold_435-1575043694:52900..53029Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1491911889:53635..53836TCONS_00065252-exon-scaffold_435-1491911889:53635..53836Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1510915933:53635..53836TCONS_00065252-exon-scaffold_435-1510915933:53635..53836Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1575043694:53635..53836TCONS_00065252-exon-scaffold_435-1575043694:53635..53836Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1491911889:57075..57238TCONS_00065252-exon-scaffold_435-1491911889:57075..57238Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1510915933:57075..57238TCONS_00065252-exon-scaffold_435-1510915933:57075..57238Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1575043694:57075..57238TCONS_00065252-exon-scaffold_435-1575043694:57075..57238Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1491911889:58774..59590TCONS_00065252-exon-scaffold_435-1491911889:58774..59590Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1510915933:58774..59590TCONS_00065252-exon-scaffold_435-1510915933:58774..59590Clytia hemisphaericaexon
TCONS_00065252-exon-scaffold_435-1575043694:58774..59590TCONS_00065252-exon-scaffold_435-1575043694:58774..59590Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_435supercontigscaffold_435:52240..59590 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.88991	4.9616	12.5863	13.3858	3.72905	2.79941	8.78116	9.71853	14.0278	12.5266	10.1696	11.5654	9.93092	7.79232	5.00888	5.08884	9.44506	7.48939	7.14295	9.78156	5.90859	6.29867	6.18256	5.30377	12.2615	12.4799	4.58791	4.45122	3.98993	3.15827
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR025532G6P_1-epimerase
IPR014718GH-type_carb-bd
IPR008183Aldose_1/G6P_1-epimerase
IPR011013Gal_mutarotase_SF_dom
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0016853isomerase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016853 isomerase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065252 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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