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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065241 ID=TCONS_00065241|Name=TCONS_00065241|organism=Clytia hemisphaerica|type=transcript|length=884bp
GCATAATACTTCACATAAAAATTTGCGTCCCTTTTTTTTGAGACACACTG
TATATCTATTAGCAATATTCAACGTAAACTCTTCGTTGTGTGCTATCAGC
AGGCCAGATTAATATTTCTCCTGATTCAAAAGCTGTCCTTCAGGGTTTGT
TGCCTGTGAAAATCTCTAAACATTTAACATTCCATACAGAGTGTCCAGCA
AAAAGCGAAATATATGTTATGTCAATTGAAGTCCTCAACActtattagcg
agtttatgtgtcagaggatatcgagggcaacggtaagtgaagtcgacaga
aaagaaagttgataattgatgtacggctctattttgcctttgctcaccta
aacagacgacggtatttttgTGTGTTTTAACGTCGTCGAGAATAAGTAGA
CGGCGATTTTGGTTACATGTCAACTTTGCATTATACCGTCTCCTTCGTTT
TATcacgaatacataaactcggtagtaTAGAATAATTAGAAAACGATAAA
ATTATATCTATATGACATTTCATAATGTGAAATTATGTCCTAATTTTTCC
GGAAACACTGTGTATCAGccaaatttttgtaattttttgggTCATTTTCT
TTTATCGGGGTTATTGCatcaattgaaaaatataaaaagaaaaaaatgta
ggACGAAAACTGTTCTATTCAAGTATACATTATTGTATTCTATGTTGTTT
TTTGTTCCCAGTAGTCATCCTGTCTGGCATACAACGTTGTGGCCACAGAT
TTTTGTAAAGCCCGATAGGCTAGATGGAGTGCCCcggtggggggggggca
tttgACTTCGAAACGATGGTATGTGctgcgcaaaatctgcttttcaaaat
cgtacccttacagtacagTTCAATATGGTTGAAA Run BLAST on NCBI transcript from alignment at scaffold_433:190222..191105 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065241 ID=TCONS_00065241|Name=TCONS_00065241|organism=Clytia hemisphaerica|type=transcript|length=884bp|location=Sequence derived from alignment at scaffold_433:190222..191105 (Clytia hemisphaerica)
TTTCAACCATATTGAActgtactgtaagggtacgattttgaaaagcagat
tttgcgcagCACATACCATCGTTTCGAAGTcaaatgccccccccccaccg
GGGCACTCCATCTAGCCTATCGGGCTTTACAAAAATCTGTGGCCACAACG
TTGTATGCCAGACAGGATGACTACTGGGAACAAAAAACAACATAGAATAC
AATAATGTATACTTGAATAGAACAGTTTTCGTcctacatttttttctttt
tatatttttcaattgatGCAATAACCCCGATAAAAGAAAATGAcccaaaa
aattacaaaaatttggCTGATACACAGTGTTTCCGGAAAAATTAGGACAT
AATTTCACATTATGAAATGTCATATAGATATAATTTTATCGTTTTCTAAT
TATTCTAtactaccgagtttatgtattcgtgATAAAACGAAGGAGACGGT
ATAATGCAAAGTTGACATGTAACCAAAATCGCCGTCTACTTATTCTCGAC
GACGTTAAAACACAcaaaaataccgtcgtctgtttaggtgagcaaaggca
aaatagagccgtacatcaattatcaactttcttttctgtcgacttcactt
accgttgccctcgatatcctctgacacataaactcgctaataagTGTTGA
GGACTTCAATTGACATAACATATATTTCGCTTTTTGCTGGACACTCTGTA
TGGAATGTTAAATGTTTAGAGATTTTCACAGGCAACAAACCCTGAAGGAC
AGCTTTTGAATCAGGAGAAATATTAATCTGGCCTGCTGATAGCACACAAC
GAAGAGTTTACGTTGAATATTGCTAATAGATATACAGTGTGTCTCAAAAA
AAAGGGACGCAAATTTTTATGTGAAGTATTATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065241-exon-scaffold_433-1491911889:190222..191105 | TCONS_00065241-exon-scaffold_433-1491911889:190222..191105 | Clytia hemisphaerica | exon |
| TCONS_00065241-exon-scaffold_433-1510915933:190222..191105 | TCONS_00065241-exon-scaffold_433-1510915933:190222..191105 | Clytia hemisphaerica | exon |
| TCONS_00065241-exon-scaffold_433-1575043694:190222..191105 | TCONS_00065241-exon-scaffold_433-1575043694:190222..191105 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_433 | supercontig | scaffold_433:190222..191105 . |
Blast
The following BLAST results are available for this feature:
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