TCONS_00065158 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065158
Unique NameTCONS_00065158
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1465

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065158 ID=TCONS_00065158|Name=TCONS_00065158|organism=Clytia hemisphaerica|type=transcript|length=1465bp
ttttgttttatttttgtttttgttttaatttttttttcaaaaaattttga
aatgaaattaatttgattttttggcaATTGCTCAAAACTACTATACTCCG
AAACCACCTATGGATTTTCCCTATTGACAAGGGAAATTCCCATCGTAGCA
TAACAAACAAATAATTTCACGTGTGCGCGCACATCGTCTCTCTTTTCACT
CAAAACTCAAAAGACGTTGGTAGCAAAATGAGAAGATGGAAATCGATTGG
TTTGATGACTGTAATCTAAAAACCGACCTTCTGAAATATGTCAAGCAAAA
TATGAAACGAAGTGAAATTTTGGACTATGTTGAACGAGATTTCCCCATGT
ACAATTGGAGCTTGAGAACTTTAGATAGAAGGCTTAGAGGCTTTGATATT
TATTATAATGATTTCAGTCTAAATGTAGAAGAGGTTGAAACTATTCTACG
CCAAGAACTGAACGGACCTGGAAAATTACTTGGGTATCGTGCAATGCATC
TCAAGTTGCGACAAAAATACGATATAAAAATACCGCGTGATTACGTATAC
GAGTTGATGCACGAAATAAACCCAGAGCTGATGAAGGACAGACAGCcttg
cttaaaaaagaaaaaaaagcggAAACACTTTGTGACGAAAGGACCAGACT
GGGTTTTTTCGCTGGACGGGCATGATAAATTAATGGGTTACCAAAACTCG
ACATTCCCCCTGGCAATTTATGGCTGTATAGACACAGCGAGTAGAAAGAT
AATGTTTCTCAAAGTCTGGGTTACGAACTCAAAGCCACAAGTGATTGGCC
GATGGTATACTGAATTTCTACGTGAAAATCAAATTGTCCCAGAATATTTA
AGAATTGATAAGGGAACTGAGACCACGACCATGGCCGAGATTCACTGTCA
TCTAAGACAAGAACATGGTGACTTAGAAGACTCGACATCATCAATTATAT
TTGGCCCTTCGACATCTAATCAGATTGAACGTTGGTGGAGAGAGCTCCAT
GATCGTTTGGAGAAGTTTTTCAAAGCTGGTCTTTCCTGGCTTAAAGACGA
AAATCACTACGACCCTCATTGTGCACAAGATAGagATATGTTGGCATTTG
TTATGGTTCCCTTGGTTCAAAGACATTTGGACGAATTCAAAGATCTCATT
TGGAACCCCCACAGAATAAGACACCAAAGAGACACATACATGGCTGATGG
AGTACCAAACCATATGTATGATTTTCCCGCCAAATACTCGATGGAACAAT
GTGGAAAACCACTCAACAAAGACACACTTGATGAAGCTGTTCAAATTACA
GGAGTTATGGATTATGGAATTGACTTTCTTCTCCCAGATCAACGAAACCA
TTACCAGCAGTTCGTGAAAAATACTGTTACAGAATCTAATTATGTTCAAA
GTTATCTAGATCTTAAATATAATCAAGCTTAGTATTTGTTTTACTAAATG
AAATGTTATATAAAT
Run BLAST on NCBI

protein sequence of TCONS_00065158-protein

>TCONS_00065158-protein ID=TCONS_00065158-protein|Name=TCONS_00065158-protein|organism=Clytia hemisphaerica|type=polypeptide|length=398bp
MEIDWFDDCNLKTDLLKYVKQNMKRSEILDYVERDFPMYNWSLRTLDRRL
RGFDIYYNDFSLNVEEVETILRQELNGPGKLLGYRAMHLKLRQKYDIKIP
RDYVYELMHEINPELMKDRQPCLKKKKKRKHFVTKGPDWVFSLDGHDKLM
GYQNSTFPLAIYGCIDTASRKIMFLKVWVTNSKPQVIGRWYTEFLRENQI
VPEYLRIDKGTETTTMAEIHCHLRQEHGDLEDSTSSIIFGPSTSNQIERW
WRELHDRLEKFFKAGLSWLKDENHYDPHCAQDRDMLAFVMVPLVQRHLDE
FKDLIWNPHRIRHQRDTYMADGVPNHMYDFPAKYSMEQCGKPLNKDTLDE
AVQITGVMDYGIDFLLPDQRNHYQQFVKNTVTESNYVQSYLDLKYNQA
Run BLAST on NCBI

transcript from alignment at scaffold_433:80456..83851+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065158 ID=TCONS_00065158|Name=TCONS_00065158|organism=Clytia hemisphaerica|type=transcript|length=3396bp|location=Sequence derived from alignment at scaffold_433:80456..83851+ (Clytia hemisphaerica)
ttttgttttatttttgtttttgttttaatttttttttcaaaaaattttga aatgaaattaatttgattttttggcaATTGCTCAAAACTACTATACTCCG AAACCACCTATGGATTTTCCCTATTGACAAGGGAAATTCCCATCGTAGCA TAACAAACAAATAATTTCACGTGTGCGCGCACATCGTCTCTCTTTTCACT CAAAACTCAAAAGACGTTGGTAGCAAAATGAGAAGATGGAAATCGATTGG TTTGATGACTGTAATCTAAAAACCGACCTTCTGAAATATGTCAAGCAAAA TATGAAACGAAGTGAAATTTTGGACTATGTTGAACGAGATTTCCCCATGT ACAATTGGAGCTTGAGAACTTTAGATAGAAGGCTTAGAGGCTTTGATATT TATTATAATGATTTCAGTCTAAATGTAGAAGAGGTTGAAACTATTCTACG CCAAGAACTGAACGGACCTGGAAAATTACTTGGGTATCGTGCAATGCATC TCAAGTTGCGACAAAAATACGATATAAAAATACCGCGTGATTACGTATAC GAGTTGATGCACGAAATAAACCCAGAGCTGATGAAGGACAGACAGCcttg cttaaaaaagaaaaaaaagcggAAACACTTTGTGACGAAAGGACCAGACT GGGTTTTTTCGCTGGACGGGCATGATAAATTAATGGGTTACCAAAACTCG ACATTCCCCCTGGCAATTTATGGCTGTATAGACACAGCGAGTAGAAAGAT AATGTTTCTCAAAGTCTGGGTTACGAACTCAAAGCCACAAGTGATTGGCC GATGGTATACTGAATTTCTACGTGAAAATCAAATTGTCCCAGAATATTTA AGAATTGATAAGGGAACTGAGACCACGACCATGGCCGAGATTCACTGTCA TCTAAGACAAGAACATGGTGACTTAGAAGACTCGACATCATCAATTATAT TTGGCCCTTCGACATCTAATCAGGCATGTTATTTATAATCTgaagttttt ttctcttttaacaCACTAAATCTTTCTCTTTTAAAAACTATTTACAAGAT CAAAACTTTTCATAAGTAAAATATCACCATGCAATATCACCAGTACAAGG AATTTTCAGGGAATAATTGCTAACTGATTTCTATGATTTTGATATAACAG ATTGAACGTTGGTGGAGAGAGCTCCATGATCGTTTGGAGAAGTTTTTCAA AGCTGGTCTTTCCTGGCTTAAAGACGAAAATCACTACGACCCTCATTGTG CACAAGATAGGTTAGTTGTTAAAGTAAATTTAATCTACATAGAAATAtac acttttaaaaaaattgacctCTTAAAAAAGATATGCCAAAATGTAATATC TGCTTGTTTGTTAACCCTAtctgccggggggggggggggggNTTAACCCT ATCTGCCGGGGGGGGGGTCTTGGTTTTTTTCTCCTTTGAATTTTAACCGC TTGCccaattcttttcaaatttcttgaCTTCTCTACAAATTCAAATATTA CAGTCTGAGTGGCTGCAGATTCAACGATAACCGCCCAAaatgcaaaattt aaaaaaaatatttttaaaattttaaattactaTAAAATCTGAACCACTAA TAACTGCCCATTTATGAGTAACTACAGAAAACAGAAGTAAAAAAGCTTAT TTCTACAAAGATCtgtctttttgaaaatacaGCCTAGTATTTTCCTCCAT TCCGGTCAATTTTTTTGGCATGTGAAAATGACCCAAATaaaggaaaattt ggaaaaaaatgtgcaAACTTCTTTGTATACAAAGTCTCTATGTACCAAAT TCATGCCAAAACAGTCTTGAGTTTGGGGGTTCCGGGAAGCCCCTCCCCGG GCAACACCAGACCCCAAATAACCCAGGGCAGATAGGGttaaagtgaaata aaaataataaaaatagctaaaaaataaaaaatagctgAGTAACTAAAAAA AATAGACCTTAAAATAAATGTTGTATCTACTCGTTTGTCgaacttaaata aaaaaagctaaatAATTGAAAGTAAAAGCTAAAAACAAATCGAAAACAGT TGTCAAAACTAAAAAGCCAActgaagaacaaaataaaacaacaataaGAC CAAGAAGaataaattttccattttttagagATATGTTGGCATTTGTTATG GTTCCCTTGGTTCAAAGACATTTGGACGAATTCAAAGATCTCATTTGGAA CCCCCACAGAATAAGACACCAAAGAGACACATACATGGCTGATGGAGTAC CAAACCATATGTATGATTTTCCCGCCAAATACTCGATGGAACAATGTGGT ATGTGCTTTTATtcacttttcagaaaaattataTTCTCTAGTATCCTTCA AGGGTACTCTTTTGTGTCTAATTGTAGGGGGGTTTAATAAGCGGAGGGGA TGGGTGGTCTGGGAAAAAATCCACAAAATGGGGGGGGTGACAATAAAGTG ATATTGGAGTGATTTTAGTGAttttccctaggaaaatgaaggtttttggc ACTTTTAGGCAATATCAAGTCAAAAAGTCGTAAAATGAGGGGGGGTCATA ATAAAGTGAGATTGGGggtgaaaaatcagaaaaattacaaagtgaCCCCC CTACCTGCCCCTACAATTAGGGACAAAAGAGTACAAACTTttatagaaac tttttttcgcggtttttggCCTAACCGTAAAATTTATATGAGAAAAATTA TTGTGAAATAATCCATACACCCATATCAAATCGgcaataactttttaaaa tccCTTTAACACAGTTTAACATTTCACATTTTAGGAAAACCACTCAACAA AGACACACTTGATGAAGCTGTTCAAATTACAGGAGTTATGGATTATGGAA TTGACTTTCTTCTCCCAGATCAACGAAACCATTACCAGCAGTTCGTGAAA AATACTGTTACAGAATCTAATTATGTTCAAAGTTATCTAGATCTTAAATA TAGTCAAGcttagtattttttttactaaatgaaatgTTATATAAAGTTTT AATATATAACctagaacaaaaataaaatcgaGTAAAATATAAACGTAAGA AATTGCTTCAAACAGTTGTGTAGTTNTGTAAAATTTATATGAGAAAAGTT ATTGTGAAATAATCCATACACCCATATCAAATCGgcaataactttttaaa atccCTTAACACAGTTTAACATTTCACATTTTAGGAAAACCACTCAACAA AGACACACTTGATGAAGCTGTTCAAATTACAGGAGTTATGGATTATGGAA TTGACTTTCTTCTCCCAGATCAACGAAACCATTACCAGCAGTTCGTGAAA AATACTGTTACAGAATCTAATTATGTTCAAAGTTATCTAGATCTTAAATA TAATCAAGCTTAGTATTTGTTTTACTAAATGAAATGTTATATAAAT

Coding sequence (CDS) from alignment at scaffold_433:80456..83851+

>TCONS_00065158 ID=TCONS_00065158|Name=TCONS_00065158|organism=Clytia hemisphaerica|type=CDS|length=4788bp|location=Sequence derived from alignment at scaffold_433:80456..83851+ (Clytia hemisphaerica)
ATGGAAATCGATTGGTTTGATGACTGTAATCTAAAAACCGACCTTCTGAA
ATATGTCAAGCAAAATATGAAACGAAGTGAAATTTTGGACTATGTTGAAC
GAGATTTCCCCATGTACAATTGGAGCTTGAGAACTTTAGATAGAAGGCTT
AGAGGCTTTGATATTTATTATAATGATTTCAGTCTAAATGTAGAAGAGGT
TGAAACTATTCTACGCCAAGAACTGAACGGACCTGGAAAATTACTTGGGT
ATCGTGCAATGCATCTCAAGTTGCGACAAAAATACGATATAAAAATACCG
CGTGATTACGTATACGAGTTGATGCACGAAATAAACCCAGAGCTGATGAA
GGACAGACAGCcttgcttaaaaaagaaaaaaaagcggAAACACTTTGTGA
CGAAAGGACCAGACTGGGTTTTTTCGCTGGACGGGCATGATAAATTAATG
GGTTACCAAAACTCGACATTCCCCCTGGCAATTTATGGCTGTATAGACAC
AGCGAGTAGAAAGATAATGTTTCTCAAAGTCTGGGTTACGAACTCAAAGC
CACAAGTGATTGGCCGATGGTATACTGAATTTCTACGTGAAAATCAAATT
GTCCCAGAATATTTAAGAATTGATAAGGGAACTGAGACCACGACCATGGC
CGAGATTCACTGTCATCTAAGACAAGAACATGGTGACTTAGAAGACTCGA
CATCATCAATTATATTTGGCCCTTCGACATCTAATCAGATTGAACGTTGG
TGGAGAGAGCTCCATGATCGTTTGGAGAAGTTTTTCAAAGCTGGTCTTTC
CTGGCTTAAAGACGAAAATCACTACGACCCTCATTGTGCACAAGATAGag
ATATGTTGGCATTTGTTATGGTTCCCTTGGTTCAAAGACATTTGGACGAA
TTCAAAGATCTCATTTGGAACCCCCACAGAATAAGACACCAAAGAGACAC
ATACATGGCTGATGGAGTACCAAACCATATGTATGATTTTCCCGCCAAAT
ACTCGATGGAACAATGTGGAAAACCACTCAACAAAGACACACTTGATGAA
GCTGTTCAAATTACAGGAGTTATGGATTATGGAATTGACTTTCTTCTCCC
AGATCAACGAAACCATTACCAGCAGTTCGTGAAAAATACTGTTACAGAAT
CTAATTATGTTCAAAGTTATCTAGATCTTAAATATAATCAAGCTTAGATG
GAAATCGATTGGTTTGATGACTGTAATCTAAAAACCGACCTTCTGAAATA
TGTCAAGCAAAATATGAAACGAAGTGAAATTTTGGACTATGTTGAACGAG
ATTTCCCCATGTACAATTGGAGCTTGAGAACTTTAGATAGAAGGCTTAGA
GGCTTTGATATTTATTATAATGATTTCAGTCTAAATGTAGAAGAGGTTGA
AACTATTCTACGCCAAGAACTGAACGGACCTGGAAAATTACTTGGGTATC
GTGCAATGCATCTCAAGTTGCGACAAAAATACGATATAAAAATACCGCGT
GATTACGTATACGAGTTGATGCACGAAATAAACCCAGAGCTGATGAAGGA
CAGACAGCcttgcttaaaaaagaaaaaaaagcggAAACACTTTGTGACGA
AAGGACCAGACTGGGTTTTTTCGCTGGACGGGCATGATAAATTAATGGGT
TACCAAAACTCGACATTCCCCCTGGCAATTTATGGCTGTATAGACACAGC
GAGTAGAAAGATAATGTTTCTCAAAGTCTGGGTTACGAACTCAAAGCCAC
AAGTGATTGGCCGATGGTATACTGAATTTCTACGTGAAAATCAAATTGTC
CCAGAATATTTAAGAATTGATAAGGGAACTGAGACCACGACCATGGCCGA
GATTCACTGTCATCTAAGACAAGAACATGGTGACTTAGAAGACTCGACAT
CATCAATTATATTTGGCCCTTCGACATCTAATCAGATTGAACGTTGGTGG
AGAGAGCTCCATGATCGTTTGGAGAAGTTTTTCAAAGCTGGTCTTTCCTG
GCTTAAAGACGAAAATCACTACGACCCTCATTGTGCACAAGATAGagATA
TGTTGGCATTTGTTATGGTTCCCTTGGTTCAAAGACATTTGGACGAATTC
AAAGATCTCATTTGGAACCCCCACAGAATAAGACACCAAAGAGACACATA
CATGGCTGATGGAGTACCAAACCATATGTATGATTTTCCCGCCAAATACT
CGATGGAACAATGTGGAAAACCACTCAACAAAGACACACTTGATGAAGCT
GTTCAAATTACAGGAGTTATGGATTATGGAATTGACTTTCTTCTCCCAGA
TCAACGAAACCATTACCAGCAGTTCGTGAAAAATACTGTTACAGAATCTA
ATTATGTTCAAAGTTATCTAGATCTTAAATATAATCAAGCTTAGATGGAA
ATCGATTGGTTTGATGACTGTAATCTAAAAACCGACCTTCTGAAATATGT
CAAGCAAAATATGAAACGAAGTGAAATTTTGGACTATGTTGAACGAGATT
TCCCCATGTACAATTGGAGCTTGAGAACTTTAGATAGAAGGCTTAGAGGC
TTTGATATTTATTATAATGATTTCAGTCTAAATGTAGAAGAGGTTGAAAC
TATTCTACGCCAAGAACTGAACGGACCTGGAAAATTACTTGGGTATCGTG
CAATGCATCTCAAGTTGCGACAAAAATACGATATAAAAATACCGCGTGAT
TACGTATACGAGTTGATGCACGAAATAAACCCAGAGCTGATGAAGGACAG
ACAGCcttgcttaaaaaagaaaaaaaagcggAAACACTTTGTGACGAAAG
GACCAGACTGGGTTTTTTCGCTGGACGGGCATGATAAATTAATGGGTTAC
CAAAACTCGACATTCCCCCTGGCAATTTATGGCTGTATAGACACAGCGAG
TAGAAAGATAATGTTTCTCAAAGTCTGGGTTACGAACTCAAAGCCACAAG
TGATTGGCCGATGGTATACTGAATTTCTACGTGAAAATCAAATTGTCCCA
GAATATTTAAGAATTGATAAGGGAACTGAGACCACGACCATGGCCGAGAT
TCACTGTCATCTAAGACAAGAACATGGTGACTTAGAAGACTCGACATCAT
CAATTATATTTGGCCCTTCGACATCTAATCAGATTGAACGTTGGTGGAGA
GAGCTCCATGATCGTTTGGAGAAGTTTTTCAAAGCTGGTCTTTCCTGGCT
TAAAGACGAAAATCACTACGACCCTCATTGTGCACAAGATAGagATATGT
TGGCATTTGTTATGGTTCCCTTGGTTCAAAGACATTTGGACGAATTCAAA
GATCTCATTTGGAACCCCCACAGAATAAGACACCAAAGAGACACATACAT
GGCTGATGGAGTACCAAACCATATGTATGATTTTCCCGCCAAATACTCGA
TGGAACAATGTGGAAAACCACTCAACAAAGACACACTTGATGAAGCTGTT
CAAATTACAGGAGTTATGGATTATGGAATTGACTTTCTTCTCCCAGATCA
ACGAAACCATTACCAGCAGTTCGTGAAAAATACTGTTACAGAATCTAATT
ATGTTCAAAGTTATCTAGATCTTAAATATAATCAAGCTTAGATGGAAATC
GATTGGTTTGATGACTGTAATCTAAAAACCGACCTTCTGAAATATGTCAA
GCAAAATATGAAACGAAGTGAAATTTTGGACTATGTTGAACGAGATTTCC
CCATGTACAATTGGAGCTTGAGAACTTTAGATAGAAGGCTTAGAGGCTTT
GATATTTATTATAATGATTTCAGTCTAAATGTAGAAGAGGTTGAAACTAT
TCTACGCCAAGAACTGAACGGACCTGGAAAATTACTTGGGTATCGTGCAA
TGCATCTCAAGTTGCGACAAAAATACGATATAAAAATACCGCGTGATTAC
GTATACGAGTTGATGCACGAAATAAACCCAGAGCTGATGAAGGACAGACA
GCcttgcttaaaaaagaaaaaaaagcggAAACACTTTGTGACGAAAGGAC
CAGACTGGGTTTTTTCGCTGGACGGGCATGATAAATTAATGGGTTACCAA
AACTCGACATTCCCCCTGGCAATTTATGGCTGTATAGACACAGCGAGTAG
AAAGATAATGTTTCTCAAAGTCTGGGTTACGAACTCAAAGCCACAAGTGA
TTGGCCGATGGTATACTGAATTTCTACGTGAAAATCAAATTGTCCCAGAA
TATTTAAGAATTGATAAGGGAACTGAGACCACGACCATGGCCGAGATTCA
CTGTCATCTAAGACAAGAACATGGTGACTTAGAAGACTCGACATCATCAA
TTATATTTGGCCCTTCGACATCTAATCAGATTGAACGTTGGTGGAGAGAG
CTCCATGATCGTTTGGAGAAGTTTTTCAAAGCTGGTCTTTCCTGGCTTAA
AGACGAAAATCACTACGACCCTCATTGTGCACAAGATAGagATATGTTGG
CATTTGTTATGGTTCCCTTGGTTCAAAGACATTTGGACGAATTCAAAGAT
CTCATTTGGAACCCCCACAGAATAAGACACCAAAGAGACACATACATGGC
TGATGGAGTACCAAACCATATGTATGATTTTCCCGCCAAATACTCGATGG
AACAATGTGGAAAACCACTCAACAAAGACACACTTGATGAAGCTGTTCAA
ATTACAGGAGTTATGGATTATGGAATTGACTTTCTTCTCCCAGATCAACG
AAACCATTACCAGCAGTTCGTGAAAAATACTGTTACAGAATCTAATTATG
TTCAAAGTTATCTAGATCTTAAATATAATCAAGCTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040858XLOC_040858Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065158-exon-scaffold_433-1491911889:80456..81428TCONS_00065158-exon-scaffold_433-1491911889:80456..81428Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1510915933:80456..81428TCONS_00065158-exon-scaffold_433-1510915933:80456..81428Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1575043694:80456..81428TCONS_00065158-exon-scaffold_433-1575043694:80456..81428Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1491911889:81606..81715TCONS_00065158-exon-scaffold_433-1491911889:81606..81715Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1510915933:81606..81715TCONS_00065158-exon-scaffold_433-1510915933:81606..81715Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1575043694:81606..81715TCONS_00065158-exon-scaffold_433-1575043694:81606..81715Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1491911889:82584..82753TCONS_00065158-exon-scaffold_433-1491911889:82584..82753Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1510915933:82584..82753TCONS_00065158-exon-scaffold_433-1510915933:82584..82753Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1575043694:82584..82753TCONS_00065158-exon-scaffold_433-1575043694:82584..82753Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1491911889:83640..83851TCONS_00065158-exon-scaffold_433-1491911889:83640..83851Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1510915933:83640..83851TCONS_00065158-exon-scaffold_433-1510915933:83640..83851Clytia hemisphaericaexon
TCONS_00065158-exon-scaffold_433-1575043694:83640..83851TCONS_00065158-exon-scaffold_433-1575043694:83640..83851Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065158-proteinTCONS_00065158-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:80456..83851 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.0363712 0.557759 0.183237 0.846909 0.581496 0.598077 0.00611439 2.28034 1.18016 0.264984 0.0864217 0.915189 0.618339 1.03155 0 1.84671 1.0234 1.34686 0.697337 0 0.960855 1.12043 4.13083e-08 1.01644 2.87138 0 0.862304
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065158 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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