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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065141 ID=TCONS_00065141|Name=TCONS_00065141|organism=Clytia hemisphaerica|type=transcript|length=1136bp
TTGTCAGTTCTTTTGACTGTGTGTTGACCTTGTATAAACTGCTGGTATAA
CCAAGTATGTGTCTCTGGAAGTTTTCTCATCTCCTGAACGTAAAGTCTGG
CGCTCTTTGCATAATGGATGTGTCCAGTCGCACCAAACAGATTCAGCATA
TTGGTGACGGCCAAAAGATGTAGTTGCCAATCAGAGGTTCGTTCTACGAA
TATGAATATTTTGATAACATCCACATAATCCATGAAAGCGATCCAAAGCT
TTGCTGTCCTTGACTCCTCTGTAAGCttagatttttcttttcttatcaTT
TCAGTGATTTTGCGGTACTCTTCAGTGGACGTCAAACTTTCAAATTTGTC
TTGAGAGTGTGTGCCATCCATAATGGTGTCGTGAAATTCTTGTAACGATT
TCAGCTCAGGTAGCTCGGGATTTCTGTCGGAGACGTTTTCAATGATGAGT
GTCATCAAGGCTGATTGGGTGGACATAAAAGCTCTCAAAGCCCTTGCGAT
TTCTTTTCCAGATATGAGTTGGGATACACTATTTTCGGCATACATCTCTT
CCAATAGCAGTTCTAGACCTGAGCCTTTCATCATGGTCCCGATACTTCCC
ACGAAACTCATTAAAGTGTGGAAACCTCCAAGCCGACATACAATATCCAG
TGATTCTTCCTTTATTATCCCCATGGCCTTTAACCAAAGCGGTTGATCGA
AGGTAACACTTGGTGTTGTGATTCCAGCTTTCTTAGCTTCGTTGATGATA
AACTGTAGCGTTGAGTAGATACATGTCGGACTTGATGGTGTCAGATCGAT
AATAGGTAGAAATGTAACGGTAGACTTGGATTTGGGATCGGGTGTAGTGC
CAGTTGCTAATTGCATATAGCCGTTCCAATTAGGTCTTGTTTTTGAATGA
CTGAACCAACCACAATGCCATATGATGTCGTAATTGATTGAAGATGGAGT
TGTAGATACAGATTGAAGTTCATTGTAAGGCTTCAATAATAGCTGATTCA
GTCCGGTTTTCGGGTTATTGAAGTAATGAACAATTTCGACTCCTCTTTTC
TCGGTTAACCTTTCGACTTTGAGGTGTTTTGTCAATCGTGGAACACGTCC
GAAATATCCTTGAGGTGGTTTGTCACTGGTACAAAT Run BLAST on NCBI protein sequence of TCONS_00065141-protein >TCONS_00065141-protein ID=TCONS_00065141-protein|Name=TCONS_00065141-protein|organism=Clytia hemisphaerica|type=polypeptide|length=378bp
ICTSDKPPQGYFGRVPRLTKHLKVERLTEKRGVEIVHYFNNPKTGLNQLL
LKPYNELQSVSTTPSSINYDIIWHCGWFSHSKTRPNWNGYMQLATGTTPD
PKSKSTVTFLPIIDLTPSSPTCIYSTLQFIINEAKKAGITTPSVTFDQPL
WLKAMGIIKEESLDIVCRLGGFHTLMSFVGSIGTMMKGSGLELLLEEMYA
ENSVSQLISGKEIARALRAFMSTQSALMTLIIENVSDRNPELPELKSLQE
FHDTIMDGTHSQDKFESLTSTEEYRKITEMIRKEKSKLTEESRTAKLWIA
FMDYVDVIKIFIFVERTSDWQLHLLAVTNMLNLFGATGHIHYAKSARLYV
QEMRKLPETHTWLYQQFIQGQHTVKRTD Run BLAST on NCBI transcript from alignment at scaffold_431:52803..53938 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065141 ID=TCONS_00065141|Name=TCONS_00065141|organism=Clytia hemisphaerica|type=transcript|length=1136bp|location=Sequence derived from alignment at scaffold_431:52803..53938 (Clytia hemisphaerica)
ATTTGTACCAGTGACAAACCACCTCAAGGATATTTCGGACGTGTTCCACG
ATTGACAAAACACCTCAAAGTCGAAAGGTTAACCGAGAAAAGAGGAGTCG
AAATTGTTCATTACTTCAATAACCCGAAAACCGGACTGAATCAGCTATTA
TTGAAGCCTTACAATGAACTTCAATCTGTATCTACAACTCCATCTTCAAT
CAATTACGACATCATATGGCATTGTGGTTGGTTCAGTCATTCAAAAACAA
GACCTAATTGGAACGGCTATATGCAATTAGCAACTGGCACTACACCCGAT
CCCAAATCCAAGTCTACCGTTACATTTCTACCTATTATCGATCTGACACC
ATCAAGTCCGACATGTATCTACTCAACGCTACAGTTTATCATCAACGAAG
CTAAGAAAGCTGGAATCACAACACCAAGTGTTACCTTCGATCAACCGCTT
TGGTTAAAGGCCATGGGGATAATAAAGGAAGAATCACTGGATATTGTATG
TCGGCTTGGAGGTTTCCACACTTTAATGAGTTTCGTGGGAAGTATCGGGA
CCATGATGAAAGGCTCAGGTCTAGAACTGCTATTGGAAGAGATGTATGCC
GAAAATAGTGTATCCCAACTCATATCTGGAAAAGAAATCGCAAGGGCTTT
GAGAGCTTTTATGTCCACCCAATCAGCCTTGATGACACTCATCATTGAAA
ACGTCTCCGACAGAAATCCCGAGCTACCTGAGCTGAAATCGTTACAAGAA
TTTCACGACACCATTATGGATGGCACACACTCTCAAGACAAATTTGAAAG
TTTGACGTCCACTGAAGAGTACCGCAAAATCACTGAAAtgataagaaaag
aaaaatctaaGCTTACAGAGGAGTCAAGGACAGCAAAGCTTTGGATCGCT
TTCATGGATTATGTGGATGTTATCAAAATATTCATATTCGTAGAACGAAC
CTCTGATTGGCAACTACATCTTTTGGCCGTCACCAATATGCTGAATCTGT
TTGGTGCGACTGGACACATCCATTATGCAAAGAGCGCCAGACTTTACGTT
CAGGAGATGAGAAAACTTCCAGAGACACATACTTGGTTATACCAGCAGTT
TATACAAGGTCAACACACAGTCAAAAGAACTGACAA Coding sequence (CDS) from alignment at scaffold_431:52803..53938 >TCONS_00065141 ID=TCONS_00065141|Name=TCONS_00065141|organism=Clytia hemisphaerica|type=CDS|length=1134bp|location=Sequence derived from alignment at scaffold_431:52803..53938 (Clytia hemisphaerica)
ATTTGTACCAGTGACAAACCACCTCAAGGATATTTCGGACGTGTTCCACG
ATTGACAAAACACCTCAAAGTCGAAAGGTTAACCGAGAAAAGAGGAGTCG
AAATTGTTCATTACTTCAATAACCCGAAAACCGGACTGAATCAGCTATTA
TTGAAGCCTTACAATGAACTTCAATCTGTATCTACAACTCCATCTTCAAT
CAATTACGACATCATATGGCATTGTGGTTGGTTCAGTCATTCAAAAACAA
GACCTAATTGGAACGGCTATATGCAATTAGCAACTGGCACTACACCCGAT
CCCAAATCCAAGTCTACCGTTACATTTCTACCTATTATCGATCTGACACC
ATCAAGTCCGACATGTATCTACTCAACGCTACAGTTTATCATCAACGAAG
CTAAGAAAGCTGGAATCACAACACCAAGTGTTACCTTCGATCAACCGCTT
TGGTTAAAGGCCATGGGGATAATAAAGGAAGAATCACTGGATATTGTATG
TCGGCTTGGAGGTTTCCACACTTTAATGAGTTTCGTGGGAAGTATCGGGA
CCATGATGAAAGGCTCAGGTCTAGAACTGCTATTGGAAGAGATGTATGCC
GAAAATAGTGTATCCCAACTCATATCTGGAAAAGAAATCGCAAGGGCTTT
GAGAGCTTTTATGTCCACCCAATCAGCCTTGATGACACTCATCATTGAAA
ACGTCTCCGACAGAAATCCCGAGCTACCTGAGCTGAAATCGTTACAAGAA
TTTCACGACACCATTATGGATGGCACACACTCTCAAGACAAATTTGAAAG
TTTGACGTCCACTGAAGAGTACCGCAAAATCACTGAAAtgataagaaaag
aaaaatctaaGCTTACAGAGGAGTCAAGGACAGCAAAGCTTTGGATCGCT
TTCATGGATTATGTGGATGTTATCAAAATATTCATATTCGTAGAACGAAC
CTCTGATTGGCAACTACATCTTTTGGCCGTCACCAATATGCTGAATCTGT
TTGGTGCGACTGGACACATCCATTATGCAAAGAGCGCCAGACTTTACGTT
CAGGAGATGAGAAAACTTCCAGAGACACATACTTGGTTATACCAGCAGTT
TATACAAGGTCAACACACAGTCAAAAGAACTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065141-exon-scaffold_431-1491911889:52803..53938 | TCONS_00065141-exon-scaffold_431-1491911889:52803..53938 | Clytia hemisphaerica | exon |
| TCONS_00065141-exon-scaffold_431-1510915933:52803..53938 | TCONS_00065141-exon-scaffold_431-1510915933:52803..53938 | Clytia hemisphaerica | exon |
| TCONS_00065141-exon-scaffold_431-1575043694:52803..53938 | TCONS_00065141-exon-scaffold_431-1575043694:52803..53938 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_431 | supercontig | scaffold_431:52803..53938 . |
Blast
The following BLAST results are available for this feature:
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