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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065125 ID=TCONS_00065125|Name=TCONS_00065125|organism=Clytia hemisphaerica|type=transcript|length=598bp
GGAGTTAACGCTCTGAACGAAGGAGATATGACGCGTTCTACAACAATAGA
AAACAAACCCAAGTTAGAGAGAACAAAATTTTCTTAGCTGTGACGCTGAA
TATCAGTATAATAACATTGCTCGATTTGCTAACTCAATTAATGCTTTTCC
ACATATAGACATTCACACAATGGTGATGGCCAGACAGCATCCTACCACCG
TTTAAAACCCTCAGTGGTTGCCTCTACGTGGTGAAAGCATTAAGCGAtca
gcaaaaagaaaaatgctaAAAGAATGAAGTAAGAATCAACAACTGTCAAA
AACAAACCCAAGTTGGAGTGAACAAAACTTTCTTAGCTGTGACGCCGAAT
ATCATTATAATAACATTGCTCGAtttgctaattcaattaatGCTTTTCCA
CATATAGACATTCACACAATGGTGATGGCCAGACAGCATCCTACCACCGT
TTAAAACCCTCAGTGGTTGCCTCTACGTGGCGAAAGCATTAAGCGAttag
caaaaagaaaaatgctaAAAGAATGAAGTAAGATTCAACAACTATCCAAA
TCGGAAGGAATCGAGGCTGTTCAAAGATCATTTACAAGACAAATCTCT Run BLAST on NCBI transcript from alignment at scaffold_431:12893..13781+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065125 ID=TCONS_00065125|Name=TCONS_00065125|organism=Clytia hemisphaerica|type=transcript|length=889bp|location=Sequence derived from alignment at scaffold_431:12893..13781+ (Clytia hemisphaerica)
GGAGTTAACGCTCTGAACGAAGGAGATATGACGCGTTCTACAACAATAGA
AAACAAACCCAAGTTAGAGAGAACAAAATTTTCTTAGCTGTGACGCTGAA
TATCAGTATAATAACATTGCTCGATTTGCTAATTCAATTAAGTCTTTTCC
ACATATAGACATTCACATAATGGTGATGGCCAGACAGCATCCTACCACCG
TTTAAAACTCTCAGTGGTTGCCTCTACACGGTGAAAGCATTAAGCGATCA
GCAAAACGAACAATGCTAAAATAATGAAGGACGAATCAGCATCTATCAAG
AAAAATGCTAAAAGAATGAAGTAAGAATCAACAACTATCAAAATCAAACC
CAAGTTGGAGTGAACAAAATTTTCTTAGCTGTGACGCTGAATATCAGTAT
AATAACATTGCTCGATTTGCTAACTCAATTAATGCTTTTCCACATATAGA
CATTCACACAATGGTGATGGCCAGACAGCATCCTACCACCGTTTAAAACC
CTCAGTGGTTGCCTCTACGTGGTGAAAGCATTAAGCGAtcagcaaaaaga
aaaatgctaAAAGAATGAAGTAAGAATCAACAACTGTCAAAAACAAACCC
AAGTTGGAGTGAACAAAACTTTCTTAGCTGTGACGCCGAATATCATTATA
ATAACATTGCTCGAtttgctaattcaattaatGCTTTTCCACATATAGAC
ATTCACACAATGGTGATGGCCAGACAGCATCCTACCACCGTTTAAAACCC
TCAGTGGTTGCCTCTACGTGGCGAAAGCATTAAGCGAttagcaaaaagaa
aaatgctaAAAGAATGAAGTAAGATTCAACAACTATCCAAATCGGAAGGA
ATCGAGGCTGTTCAAAGATCATTTACAAGACAAATCTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065125-exon-scaffold_431-1491911889:12893..13007 | TCONS_00065125-exon-scaffold_431-1491911889:12893..13007 | Clytia hemisphaerica | exon |
| TCONS_00065125-exon-scaffold_431-1510915933:12893..13007 | TCONS_00065125-exon-scaffold_431-1510915933:12893..13007 | Clytia hemisphaerica | exon |
| TCONS_00065125-exon-scaffold_431-1575043694:12893..13007 | TCONS_00065125-exon-scaffold_431-1575043694:12893..13007 | Clytia hemisphaerica | exon |
| TCONS_00065125-exon-scaffold_431-1491911889:13299..13781 | TCONS_00065125-exon-scaffold_431-1491911889:13299..13781 | Clytia hemisphaerica | exon |
| TCONS_00065125-exon-scaffold_431-1510915933:13299..13781 | TCONS_00065125-exon-scaffold_431-1510915933:13299..13781 | Clytia hemisphaerica | exon |
| TCONS_00065125-exon-scaffold_431-1575043694:13299..13781 | TCONS_00065125-exon-scaffold_431-1575043694:13299..13781 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_431 | supercontig | scaffold_431:12893..13781 + |
Blast
The following BLAST results are available for this feature:
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