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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065091 ID=TCONS_00065091|Name=TCONS_00065091|organism=Clytia hemisphaerica|type=transcript|length=691bp
AGAATGAGATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTGGGTT
CGCATCAACCTCGCTTTGGAGTATTGTATCAAAGAAGCGCTCATTGATGT
ACTTCGCAACGTGCATAATGACACTTCTTATACTGGACTTCCAACTTGTC
CAAAACAACTTCATCAAATTTTCNTGAAAGCTGATAGAGTTGAAATGGAT
GATTTAGCCAagtcaatgaaaaatgaaatgaataCGAAGGTTAATAAAGA
TGAAATGGATGgtatgttttatgttttttttttgcaagaagTGAATCAAA
CGAACAAGAAAGAACGACACAACCAACTACCCCAGGAAACTCTGCCTTCG
TTTATCATGtcagggccggcgaatcggttttaaaagtgagggggctaaat
gatatagtgactaaggaggccccaCCGGATGGGGCCgacgggccggaaaa
tttttgaaattatggtaCTCTACATTGGCTTAGAATTGGCCTAAATNtat
agtgactaaggaggccccaccatggttggggccgacgggccggaaaattt
ttgaaattatggtaCTCTACATTGGCTTAGAATTGgcctaaatttaattt
ttataaagttattggaatgaaaaatcaaagaagTTAGGTGTCTTTTTATA
CTGATAATCGCCAAAGAATATATTACTATATAATAACAAAA Run BLAST on NCBI transcript from alignment at scaffold_43:45623..46527- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065091 ID=TCONS_00065091|Name=TCONS_00065091|organism=Clytia hemisphaerica|type=transcript|length=905bp|location=Sequence derived from alignment at scaffold_43:45623..46527- (Clytia hemisphaerica)
AGAATGAGATGAGTACACCATTGTACATCCTCCAAAGCGAGTATTGGGTT
CGCATCAACCTCGCTTTGGAGTATTGTATCAAAGAAGCGCTCATTGATGT
ACTTCGCAACGTGCATAATGACACTTCTTATACTGGACTTCCAACTTGTC
CAAAACAACTTCATCAAATTTTCNTGAAAGCTGATAGAGTTGAAATGGAT
GGTATGTTTTATTTCGTTTACTTGTTTTATATTTTGGAGAATGTGAACAA
TTATCTTCTGCAAAAGCTGATAAAAATGACGACGAAGATGAGATAACATA
TTTATTTCCTGCCTCTTTTGAATTCTTTGTAATGTAGGAGCTGAATCTTG
TTAACTTTTTTACCTCTTGACACTGAATTTGTGGTCATTCAATAACACCA
TTTGTTTTCCTCTAGATTTAGCCAAGTCAATGAAAAATGAAATGAATACG
AAGGTTAATAAAGATGAAATGGATGGTATGTTTTATGTTTTTTTTTTGCA
AGAAGTGAATCAAACGAACAAGAAAGAACGACACAACCAACTACCCCAGG
AAACTCTGCCTTCGTTTATCATGTCAGGGCCGGCGAATCGGTTTTAAAAG
TGAGGGGGCTAAATGATATAGTGACTAAGGAGGCCCCACCGGATGGGGCC
GACGGGCCGGAAAATTTTTGAAATTATGGTACTCTACATTGGCTTAGAAT
TGGCCTAAATNTATAGTGACTAAGGAGGCCCCACCATGGTTGGGGCCGAC
GGGCCGGAAAATTTTTGAAATTATGGTACTCTACATTGGCTTAGAATTGG
CCTAAATTTAATTTTTATAAAGTTATTGGAATGAAAAATCAAAGAAGTTA
GGTGTCTTTTTATACTGATAATCGCCAAAGAATATATTACTATATAATAA
CAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065091-exon-scaffold_43-1575043694:46327..46527 | TCONS_00065091-exon-scaffold_43-1575043694:46327..46527 | Clytia hemisphaerica | exon |
| TCONS_00065091-exon-scaffold_43-1575043694:45623..46112 | TCONS_00065091-exon-scaffold_43-1575043694:45623..46112 | Clytia hemisphaerica | exon |
| TCONS_00065091-exon-scaffold_43-1510915933:46327..46527 | TCONS_00065091-exon-scaffold_43-1510915933:46327..46527 | Clytia hemisphaerica | exon |
| TCONS_00065091-exon-scaffold_43-1510915933:45623..46112 | TCONS_00065091-exon-scaffold_43-1510915933:45623..46112 | Clytia hemisphaerica | exon |
| TCONS_00065091-exon-scaffold_43-1491911889:46327..46527 | TCONS_00065091-exon-scaffold_43-1491911889:46327..46527 | Clytia hemisphaerica | exon |
| TCONS_00065091-exon-scaffold_43-1491911889:45623..46112 | TCONS_00065091-exon-scaffold_43-1491911889:45623..46112 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_43 | supercontig | scaffold_43:45623..46527 - |
Blast
The following BLAST results are available for this feature:
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