TCONS_00065048 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065048
Unique NameTCONS_00065048
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length920

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065048 ID=TCONS_00065048|Name=TCONS_00065048|organism=Clytia hemisphaerica|type=transcript|length=920bp
GGGTAAAGGTAAAGCTAACAGTTCTGCTTCATCTGAGGATAAAACGAGAG
AAGCAAAAAGAAGAGGTTTAAGctcacaaacaaacaaaacagaaaatatg
GCAGAAGCTGAAACAATAAAGACTGCAGTAGCTTGGTGTTTTGGATACGG
CTCACTGGTAGAATCCTACCATAACAAAGCGAAATATGTTGAAGTGAATA
TCAATTATCGAAGAGTGTGGAATGCATGGAATACAAAAGCACGTGCAACT
TTCCTTGGTCTTgaaaagacaattgaaaaaCATGCAGTCAACGGAGTGAT
ATATCCCATATATTcacaaaaagaaattgaagagcTCGACCTTCGTGAAC
AAGGTTACTCGCGACTCGCCATCCCTCACGAAGACGTCAAAGTTTTGAAC
GAAGGCTTAAACGAAACCATGCAAGATATGAAATTAGATTCATCTATGCT
TTTGTTCACTTATGTTCCAAACTGTGATGGAAATGCGCCTGAAGCTTGGT
TCCCAATTCTACAAAGTTACGTCGATTTATGTGCTAATGGATTTTTACGT
TTCCGCAAAGAAGAGCAACCACGCGATGCCAGCGACCCCGTTAGAAGATT
CTTGGACACCACTCATAAATGGTCAAAATACATGTTAAACGATCGTGTTT
TAGCACGTCGACCCTGGGTGAGCgagaaaaatcaatttgtgattgATGAT
TACTTAGATGACGAGGATGACGTCAACGATATCCCGGCCGCTTTGTATCC
GACCGATTTTTCTGTCCGCTTCTTTAGAGAAATTCAAGAAGGACTTATGA
CGTGTGGTACTGACCGTAAAAGATATGTCTCCGATAATTCGATTTGTCat
taacaaaaaagttaaaactttaACTGAAATCATAGGACTTTTTAACTTTA
GGGCTTGTTTAGATAATGCT
Run BLAST on NCBI

protein sequence of TCONS_00065048-protein

>TCONS_00065048-protein ID=TCONS_00065048-protein|Name=TCONS_00065048-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
GKGKANSSASSEDKTREAKRRGLSSQTNKTENMAEAETIKTAVAWCFGYG
SLVESYHNKAKYVEVNINYRRVWNAWNTKARATFLGLEKTIEKHAVNGVI
YPIYSQKEIEELDLREQGYSRLAIPHEDVKVLNEGLNETMQDMKLDSSML
LFTYVPNCDGNAPEAWFPILQSYVDLCANGFLRFRKEEQPRDASDPVRRF
LDTTHKWSKYMLNDRVLARRPWVSEKNQFVIDDYLDDEDDVNDIPAALYP
TDFSVRFFREIQEGLMTCGTDRKRYVSDNSICH
Run BLAST on NCBI

transcript from alignment at scaffold_428:371131..382621-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065048 ID=TCONS_00065048|Name=TCONS_00065048|organism=Clytia hemisphaerica|type=transcript|length=11491bp|location=Sequence derived from alignment at scaffold_428:371131..382621- (Clytia hemisphaerica)
GGGTAAAGGTAAAGCTAACAGTTCTGCTTCATCTGAGGATAAAACGAGAG AAGCAAAAAGAAGAGGTTTAAGGTCAGTTGATAAAAGTTGTGTGAAATAT CTGTGTGTGCGGGATGTGAGGTAAAGCTTTGACATAGTCGTGTAGGCTAA AAGGCTAGGTAAAGGGAAATTTAAAATTAGCTGTATCAGAGCCACAACCC CCACAAGCAGGGCAGATGTTCAACAAAGTTTATTCACCTTCTCTATCATT ATAAGATTTTGCTATTTATTGTAGATGTTTTTTATTGTACAAATTTTTGA AGCCTTCTGTTATTCTAAGCTTTTTTCAGATTTAAGTCGATTATTATCCT TTGTTCTTAATTTTACCCTTTCGTGAGTATTTTTGTGTGATTTTTTTTTA AGAAATTGGGTGTTTAGAGCGTATAAAACCTTGAAATATTCAACCTGTTC TTAACTTGTTCTTAAGGTGTTTTTAAAGGTTTTATTTTTACATAAGTATT TACAATCATATCAGATACATATTTCATATCAGGACAGTATCTTGCTATTG TTATATTATGCTAATATAAGCAAAAATTGTTTTTCTTTTCCTCTTTCTGG CCAATCTTGCTCCACATCCGTGTCGACCCAATGTGAAAAAGCTTGTCAAT TAAAATTGATGAGTAAGCAAAAGCTATCACTCTATTTAAAAACAAAACCT TTAAGGTCTTGTGTTCTTATTGTTTGTTCTCATAAAAAACGTGTATAGAA GCAAATACGATATTTTTTGAAAGAAGATTCACACATATCTTTTCCACACG AGAGCAGTTTTGTGTGTGGTGTGTAATTGAAATTCATTTCCTGGGAAGAA GTTAGTAGTGAAATACAAGGTCATAAAAGTGCTTACTTTCCAGCTTTAAG ATTAGGAGGGAAGTATTGACAGTAGTCAGCCGCTCAATGCTATAACAAAT TCAAAGTGTCGAAGAGTTTTTGCAGTGTGTCCAAAAAAATGCGAAACAGA ATTCATATTAATGAAAATCCTCGTACATTAATTTACATGGGCTTTAATTA CTTATAAACAAAGAAGTTCCATCTTTTTGCAGCTAAACTGCAGTGGTCGA AATACACAGGTAATCAACTGAAAACATATGAACTACGTGAATGAATTTCC TGCTCAATCTGTTCTAAATATGGAAAATACATTAGCGAGCAAAAAAATTC GGCGACATTTAATAGTAATCCAGACTTTTTTAATTACACTATAAGAGACC CCCCAAAGCGGTTTTCGTGAAGGGCATGATTTGAAAATTTTCTTTGTGAT TGCGTGATCAAAGGTCAAAACATGATCATGATTTGAAATATTTTGGAGCC TTGATGCGTGACTTGGACTTTTTCAAAGGGATGCTTTATTATCCATTTTT TTGCTATTTTACGTGATCGTGGTTTACGACAAAAACTTGCTCGATATCGT GATCAGAGCTACCACTGGGGGAGAAGAAAGGTAGAAAGCTTTTTTTCTCA GCAATAACCACGATGATTTATCGTGATGTAACTTGACTCTCTTACACGTT TTGTTTATAAGAACATCTAAACATTTTGAAGCCTTCGAATGTTCTTCACT TTTTGAGTTTTAAGCCTAGAAAATACACGTTTTTTATGAGAACAAGTTAA GAACATTTTAAGGCTTTGTGGAGTCAAAAACACCATATTTCTTCGGAAAA TGGTAAAAAATACACACAAAATGGTCAAAATAATGTTCATGTTAAGACCG TTTTTAGGCTGGAAACTGAAAAAGTTAAGAACATCTGAAGGCTTCAAAAA TGTTTGGATGTTCTTATAAAAAACCTGTAAGAGGGTTAAGTTACATCACG ATATAAAAGTATTAATATAGATTAGGCTCTTGCTCAACGAAAAGATTTCT TATAGGAAGTACTATAATGAGGTTTGCGAATCAGACTAAAGAGAGATGAG GGAATAAAAACGTCAACTGAAAGATGGATTCAAAGGATTAGCTGCAAAGC GTGTTTTAGCTCGACCGCGTTCTCTTATTTGAAAGTCAATATAGAAAGAG GACGATTGTATTCTGTAAAAAAGCATGAACAGTTATCATGCAAAATTCTT TGGGGATATGGTTGAAGTACTTTGAAGGCAAATATTCATTTCAAGAGAAA AATTGATTTTACACAACAAATCTGCTCAACTTTTTCTAATTACACTGCAT TTTGAGCTTGGCTGAGATTTAAATCAGTCCAGCCATTAACATTGAGCTAT GATGATTATGGTAAAGCATGAAATTTGATAATGTGATTTTGGTTAGAATT TTTGTTTTGGTTTGAATTTTTGTTTTGGTTTGAATTTTTGTTTAATTTTG GATTTCTTTCGAATTTTAAAAGATTACTTTAACTTTTGATTTTTGCTCAA TATACACGTTTTTTTATAAGAGCATCCAAAATTTTTGAAGCCTTCGGATG TTCTTAAGTTTACCATTTTAGGAGTATTTTTGTGCAATTTCCTAAGAAAT TGGGTGTTTTTGAGCCCATGAAGACTTAAAGGCCTTAAAATGTTCTTAAC ATTTTGGCCATTAAATCCTTATGTTCTTATATAGTTTGCACAAAAAAAAA GAAGCTTTTTACCAATTTATAAAAGTACATAGACTTTAGTTCGATAGAAA AATTAGACGCCATTGAAACTTGTCTACTACTGAACTATAATAAACTACTG GAACTATTTCAAACGCTTGTCTTCGTGGTCTTCGTGGTCTGATGGGGGTC TGATTGAGGGAAAAGAATATGCAAAAAATAACATGTGAGAGCAAGTGAGA GGGTATATTCTTCCTCTACATTCATATGTGTAATGTTTGATGTGGCTTAG AAGGATGGTAAATTTAATATTTTGTATTAGATTACATAATGTCTAGACTA GTGAAAGTGTCACGTTTAAAGGTGATNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTT TTTGTAACTCGGGTTTTTGTAACTCGAGTTTTTGTAACTCGGGTTTTCCG GGCCTCCTGAAAGATGGATACAAAGGATTAGCTGCAAAGCGTGTTTTAGC TCGACCGCGTTCTCCTATTTGAGAGTCAAAATTGAAAGAGGACGATTGTA TTCTGTAAAAAAGCATGAACAGTTATCATGCAAAATTCTTTGGGGATATG GTTGAAGTACTTTGAAGGCAAATATTCATTTCAAGAGAAATATTGATTTT ACACAACAAATCTGCTCAACTTTTTCTAATTATGCTGCATTTTGAGCTTG GCTGAGATATAAATCAGTACAGCCATTAACATTGAGCTCTGATGATTATG GTAAAGCATGAAATTTGATAATGTGATTTTGGTTAGAATTTTTGTTTAAT TTTGGATTTTTGTTTTGGTTTGAATTTTTGTTTAATTTTGGATTTTTTCG AGTTTTAAAAGATTACTTTACCTTTTGATGTTTGCTCACACGTTTTTTTA TAAGAACATCCAAAATGTTTGAAGCCTTTGGATGTTCTTAAGTTTACCAT TTTAGGAGTATTTTTGTGCAATTTCCTAAGAAATTGGGTGTTTTAGAGCC CATGAAGACTTAAAAGCCTTAAAATGTACTTAACATTTTGGCCATTAAAT CCTTATGTTCTTATATAGTTTGCACTTATCAAAAAAAGAAGCTTTTTACC AATTTATAAAAGTACATAGACTTTAGTTCGATAGAAAAATTAGACGCCAT TGAAACTTGTCTACTACCTACTACTAAACTATAATAAACTACTGGAACGA AACTGAAACGTTTGTCTTCGTGGTCTGATGGGGGTCTGATTGAGGGAAAA GAATATGCGAAAAATAACATGTGAGAGCAAGTGAGAGGGTATATTCTTCC TCTACATTCATATGTGTAATGTTTGATGTGGCTTAGATGGTAAATTCAAT ATTTTGTATTAGATTAATGTCTAGACTAGTGAAAGTGTCACGTTTAAAGG TGATATCAAATACAGTACACTGGCAGTTGATTATTTATGTGACAGACATT GATCTCTATTATATTCTGGAGAAAGTAATTTTGTGTTTGCTTTATAGAGT GAATATTTATCTATGACTACATTTGTTTAATTTCGCTTCCATTCCGTTCC AGTCTCTCAGTTTATATACTCGTTATATACTCGTGTGTTTTAAGTTGTGT ACAATACGTCAAGTACTAGACCGGATTGGTCTCGACAGGATTTCCTAACG GAAATTTTACGCGGTCACCATTTTAGATAATTGATACTTGAAATTTCTCT CTGAAGTATTTTCCTTCCTGCCTTTTTACTAGTATTCTTCGTAATGGTTT CCGCTGGCAGCTTTGGTTATGTTTAAACTTAAAAGCTCAGAAATCATCAG TTGTTTCTAGAGACTCAAAATTTCCAACTCATAACTCACAACTCATGACT CGTGTTCTTCCCAAATTCTTGCTTTTAACGAGTTAAACGTGACAGTTACA GTTATTCCCATTATGCCTTTATTTCCTCTCCTTCTTTCAGCTCACAAACA AACAAAACAGAAAATATGGCAGAAGCTGAAACAATAAAGACTGCAGTAGC TTGGTGTTTTGGATACGGCTCACTGGTAGAATCCTACCATAACAAAGCGA AATATGTTGAAGTGAATATCAATTATCGAAGAGTGTGGAATGCATGGAAT ACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAAAGACAATTGAAAAACA TGCAGTCAACGGAGTGATATATCCCATATATTCACAAAAAGAAATTGAAG AGCTCGACCTTCGTGAACAAGGTACACATTGCTTTTTATAAGCAACCAGG TTGCTATCGAGCTCTGAGATTAGCCTAAACTTTTTTACTATCTCGTAAAG TAGAAGCTGATTAGATAATCTAACCATGGCAAATGATAGCCCTTGACCTA ATAAGCATAAATATGGCATAATATCAGGGTTGGTCAAATAAAATTTCCTG ACCCGAAAATTGAGATGCTTATTAGAAAAATGTGAATTCAATTCATAAAA TGCCAGAAAACGGGAGGGGCACAGCTGGAGAGTGCTTCCCATTCTATTTG AGAAGATTTTATGGTTAAGACGTTTTTACGTAAAGATTGTCTTGCGAAAA AACCTTTATCAAACAAAACTTTCTGAAATACACCAGAGACACGCCATCAA AGGTTCGCGAGACTTTGCTCTAAAAATAAAAATAAAAACTGGCATTAAAG GTTCTAATTATTTCAAAATCAACTCCTTAAGGGGGTAGTCATATGAGAAA TTTGAAATGTCATTTTTTAAACTTTTTGTTATATCTTCTGAAGTAGTAAA TATTTTTCAATAAAACTTTCCACAATTGTAGCACAACTATAAAGGATTTG AAAAATTAAAAAAAAATTCTAAAAATAGTAAAGACGGGGGTAATATCGTC CAGGGGGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTTGCGTCAACTCTGCGTACGACGCGTAAACATGGCTTTAAGTCAATA AAAGTGCATTTTCTCATCAAAAAACATATTGCCAACAAAATATATCATCC TTGTGGTCTCTCAAATCTGTTTATATCATTTACAGGTGAATTTCAGTGTT GATCTTAGGGAAACATGTCTTCGGCGGGTTGAACGTCAATCATGATGCAA TGCATAGTTTTACTCAATTTTCCAGGATCGCCTCTGGCGCCATGATTCAT CAAAGACTAGATTTCCACTGGATTTAAGACTCACAATGGATACATCATTG AATACGTTTGGTTCCTTTTATTCATAGTCTATAGTCCGTCACTTTGAAAA GTTTTTTTCGGTGTACAAGTTTTACTGCTCGAAAACATCAGTTCGCAGAA TCAAATTGTTGCTTTCACTCAAATTATAGGCTTCCAATAAGCTTTCCCAG TTGTGAGAAATGAAATGAAACATTCAATAATATCATAATTCAATCCAAAA CAATACATAAGCTCAGTTTCCATGTCAAAAACACAGCTGATTGCCTCCAA AATGTGAATGTTTTTGAAAATACCACTTCTTTGGTTACCATCTTTAATTA CGTCATATCAAGAAATCCCGGGGAAAAAAGGCGGTATTGACTTAGACGCC CGGAAAGGGCGTAAAAAGAGCTTTCATTTGATATGTCATGATGCTATGTT TAGAGCAGCCATACGGAAATGAGGCCCTAGCAACGGATGCGATTTCCCGT TGCTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTTTTCAGGGTATGTTCAGGAAGCATAAAAGATCCTA AAAAGCCCTAAATCCCGAAATTGATAAATTTTTCACCAAATTTCAAAATC TCATATGACTACCCCCTTAATCTATACTCGTAAATATGATCCTATGCTTC TTTCAGGTTACTCGCGACTCGCCATCCCTCACGAAGACGTCAAAGTTTTG AACGAAGGCTTAAACGAAACCATGCTAAACATGAAATTAGATGCATCCAT GCTTTTGTTCACTTATGTTCCAAACTGTGATGGAAATGCACCTGAAGCTT GGTTCCCAATTCTACAAAGTTACGTCGATTTATGCGCCAATGGATTTTTA CGTTTCCGAAAAGACGGGCAACCACGCGATGCCAGCGACCCTGTTAGACG ATTCTTAGACACCACTCATAAATGGTCGAAATACATGTTAAACGATCGTG TTTTAGCACGTCGACCCTGGGTGAGCGAGAAAAATCAATTTGTGATTGAT GATTACTTAGATGATGAGGATGACGTCAACGATATCCCGGCCGCTTTGTA TCCGACCGATTTTTCTGTCCGCTTCTTTAGAGAAATTCAAGAAGGACTTA TGACGTGTGGTACTGACCGTAAAAGATATGTCTCCGATAATTCGATTTGT CATTAACAAAAAAGTTAAAACTTTAACTGAAATCATAGGACTTTTTAACT TTAGGGCTTGTTTAGATAATGCTAGAATATAAAATTCATTTATTAAATTC ATTGCTGCAACTTTTTTTCTGAAGTTAATCGGATGTTTGAGAACGAATTT TACCCTCTATGTCCGCTTATGGAGGGAAAAGAGATTATCGACCACTCGTT TTTGTCCATTTATCCATGTCCAATTGAGTTTCGATCTTTAGAAACTTTTA TTTCAACTTTAACTAGAAATTTCGTCCGATGGTGCAGGTGAAGGCACGAC GCGCCAGGTACGGCGGGGGGGGCCCCCCCCCCCGGGGGGGGGGGCCCCCC CCCCCGGGGGGGGGGGCCCCCCCCCCCGGGGGGGGGGGCCCCCCCCCCCG GGGGGGGGGGCCCCCCCCCCCGGGGGGGGGGGCCCCCCCCCCCGGGGGGG GGGGGTACAGCAGCCGCCGTACCAGATTTTCACAAAAAATCTCGAAATCT TCCGCTCGTCGGTAAAATCGTTCAAATTTCCTCATTCACCGTACCAGATT TAAAAAGCTTCCGTCGTGCCTGGAGGTGCCCACCTTTTATAGTGTCCACT TACTTTTAAGACAAACTTTATAGGTTTAGCATCATTGACAATCCCTCAGG GACGAATACCAGTAGGGTTGGGAGCTATATGACTTTATAATGTCCATAAA TTAGAAGTCTTAAATTCTCAACCTCTTTGAGGCACCAAGCTTTTAAGTTT TCTAATATAAGATTTTTCCTTTTGCTTCTTTTTAGTGAGTAGAATTTGAA ACTCTGTCCCGCCAACGTCATTCAAATAGTTAGTCATATGGCTAGTTTAT AATGTTAAGACAAGTGTAATTCGATCTGATAAATGACCACTATATAATAC TTTTTAACACCCTTTTTTCACGCATGACTTTTAGTTCGATGATATGATAT CTAGTCAGATCTAGTTAGCATTTCCATTTTAGTATTAGCAAAACATCACG AACAGAATAGGGTCTATTTTATTTAATAAGATGCATGTGCCCTTATAAAT TGACTCACGTTTAGTTGACTTAACGAGTTTTGGAGAAAAGAGCTAAAAAA ATTTTACCAAATTTACTTGTGATTTGGTATGCATCAAAATTTGATAGCAT CTACATCTGAGGTATTGAAAGGTGTGAGAGCATTGAATGAGCTTCGCGTG AGTGTAATGAGACTACTGAGAGGGGTGAGTGCCGTGAGTGCATCGAATGA GTCTAGTGAGTGCCTAAAAAGCTTAAATTCTTTGATATTATACCTTATTG GGGAAAAAATGTCAGGGAAAAGTGACGAAAATTCTTAGGGGGTGACGAAA TTTTTCACCGACGAAATATTTCCCCGACATTTTATCACCTGACCAAAACT TGTACCCGATTTTTTTATCCCCGACAAAAACAATTACCTCAAATTTTTCG GCAACCAAAATTCAAATCTAATTTTTTACACCTTTATTTACCGAAATTAG TGCTTTAAACGTCGAATTACAAGATCTATTTTCGAGCTAGTGAAGGAAAC CATTTCTTTTGGAAAGTTTAGTCGGGTGATGATAGTGACGAATTTGAAAT TTTGGTTGGGGAAAAGTGACGAAAATGCCTCTAGGTGACAAAACTTTTCC CCGACATTTTTTTCCCGATAAGGTATTCGATGAGTTGAGCTACGTCATAT CTTCTTCGCCCTGAGTGCAGAACTTCAAAAACATTAGACTGTAAAAATTT TAGGCAATGCTGTTGGTTGGTTGGCTGAGTGATAGGTACTTTATTCTTTT TTGTGGAATCTTTATTTCAGATTTATACTGGCTAAAAGCAACAATCTTTT CATTTATGTCAAATTTATCGAACAAAATGATAGAAGAAATCAACCCTGAA CAAACAGCTATAGCTTGGTGTTTTGGATACGGCTCACTGGTAGAATCCTA CCATAACAAAGCGAAATATGTTGAAGTGAATATCAATTATCGAAGAGTGT GGAATGCATGGAACACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAAAG ACAATCGAAAAACATGCAGTCAACGGAGTGATATATCCCATATATTCACA AAAAGAAATTGAAGATCTCGACCTTCGTGAACAAGGTACACATTGCTTTT TATAAGCAACCAGGTTGCTATCGAGCTCTGAGATTAGCCTAAACTTTTTT ACAACAGTATCTCGTAAAGTAGAAGCTTCTTAGATAATCTAACCATGGTA AATGATAGTCCTTGACCCAATAAGCATAAATATGGTATAATATCAGGGTT GGTCAAAGCAAATTTCCTGACCCGAGAATTGGAGTTTCTTATGAAAAAAT GTATTTAATTTATAAAATGACAGAAAACAGAGGACCACAGCAGGAGAGAT GGAGCGAAGGGGTCCAATCTTAGGAGGGTAAATTGTTTTTGGTTAGACAA AAGATTGTGTTTTTGACATTCATTTGAGGGGCAGGAATAGCTTTAATACT AATAGAGACTCAGCGGTTTTCGTGATGGGGTGATTGACGTTTTTTCAAGT TCGTGATTTTGTGATTGAATATTTTTCAAGTGCGTGATTACGTGATAGGA GGAACTAAAATGGTCAACGTGATCGTGATAGAAAGGAAATTTACTCCTGA TAACGTGATTTGGAGTTTTTTATTGCATGATTTAAAAGGTGACTGGGGGG GGGGCTCTTAATACCATCTGCTTTCCATTCTATTTGAGAAGATTTTATGG TTAATATGTTTTTACGATTGTAAAGATTGCCTTGAAAACCTTTATCAATC AAAAGCTCCTGAAATGCACGAGAGACACGCCATCATCCTTCTAGATCCGG AGATATCAGCCTTTAAAGTTTGAACTAGCGACTTTCTTTAAAAAACTTAG AAAAAAATGGCCGTGGCACATTTTTTAAAGGGTTAATCTATACTCATAAT GTAATCCTTTGCACTTTCTTTTAGGTTACTCGCGACTCGCCATTCCTCAC GAGGACGTCAAAGTTTTGAACGAAGGCTTAAACGAAACCATGCAAGATAT GAAATTAGATTCATCTATGCTTTTGTTCACTTATGTTCCAAACTGTGATG GAAATGCGCCTGAAGCTTGGTTCCCAATTCTACAAAGTTACGTCGATTTA TGTGCTAATGGATTTTTACGTTTCCGCAAAGAAGAGCAACCACGCGATGC CAGCGACCCCGTTAGAAGATTCTTGGACACCACTCATAAATGGTCAAAAT ACATGTTAAACGATCGTGTTTTAGCACGTCGACCCTGGGTGAGCGAGAAA AATCAATTTGTGATTGATGATTACTTAGATGACGAGGATGACGTCAACGA TATCCCGGCCGCTTTGTATCCGACCGATTTTTCTGTCCGCTTCTTTAGAG AAATTCAAGAAGGACTTATGACGTGTGGTACTGACCGTAAAAGATATGTC TCCGATAATTCGATTTGTCATTAACAAAAAAGTTAAAACTTTAACTGAAA TCATAGGACTTTTTAACTTTAGGGCTTGTTTAGATAATGCT

Coding sequence (CDS) from alignment at scaffold_428:371131..382621-

>TCONS_00065048 ID=TCONS_00065048|Name=TCONS_00065048|organism=Clytia hemisphaerica|type=CDS|length=3408bp|location=Sequence derived from alignment at scaffold_428:371131..382621- (Clytia hemisphaerica)
GCTTAAACGAAACCATGCAAGATATGAAATTAGATTCATCTATGCTTTTG
TTCACTTATGTTCCAAACTGTGATGGAAATGCGCCTGAAGCTTGGTTCCC
AATTCTACAAAGTTACGTCGATTTATGTGCTAATGGATTTTTACGTTTCC
GCAAAGAAGAGCAACCACGCGATGCCAGCGACCCCGTTAGAAGATTCTTG
GACACCACTCATAAATGGTCAAAATACATGTTAAACGATCGTGTTTTAGC
ACGTCGACCCTGGGTGAGCGAGAAAAATCAATTTGTGATTGATGATTACT
TAGATGACGAGGATGACGTCAACGATATCCCGGCCGCTTTGTATCCGACC
GATTTTTCTGTCCGCTTCTTTAGAGAAATTCAAGAAGGACTTATGACGTG
TGGTACTGACCGTAAAAGATATGTCTCCGATAATTCGATTTGTCATTAAG
TTACTCGCGACTCGCCATCCCTCACGAAGACGTCAAAGTTTTGAACGAAG
CTCACAAACAAACAAAACAGAAAATATGGCAGAAGCTGAAACAATAAAGA
CTGCAGTAGCTTGGTGTTTTGGATACGGCTCACTGGTAGAATCCTACCAT
AACAAAGCGAAATATGTTGAAGTGAATATCAATTATCGAAGAGTGTGGAA
TGCATGGAATACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAAAGACAA
TTGAAAAACATGCAGTCAACGGAGTGATATATCCCATATATTCACAAAAA
GAAATTGAAGAGCTCGACCTTCGTGAACAAGGGTAAAGGTAAAGCTAACA
GTTCTGCTTCATCTGAGGATAAAACGAGAGAAGCAAAAAGAAGAGGTTTA
AGGCTTAAACGAAACCATGCAAGATATGAAATTAGATTCATCTATGCTTT
TGTTCACTTATGTTCCAAACTGTGATGGAAATGCGCCTGAAGCTTGGTTC
CCAATTCTACAAAGTTACGTCGATTTATGTGCTAATGGATTTTTACGTTT
CCGCAAAGAAGAGCAACCACGCGATGCCAGCGACCCCGTTAGAAGATTCT
TGGACACCACTCATAAATGGTCAAAATACATGTTAAACGATCGTGTTTTA
GCACGTCGACCCTGGGTGAGCGAGAAAAATCAATTTGTGATTGATGATTA
CTTAGATGACGAGGATGACGTCAACGATATCCCGGCCGCTTTGTATCCGA
CCGATTTTTCTGTCCGCTTCTTTAGAGAAATTCAAGAAGGACTTATGACG
TGTGGTACTGACCGTAAAAGATATGTCTCCGATAATTCGATTTGTCATTA
AGTTACTCGCGACTCGCCATCCCTCACGAAGACGTCAAAGTTTTGAACGA
AGCTCACAAACAAACAAAACAGAAAATATGGCAGAAGCTGAAACAATAAA
GACTGCAGTAGCTTGGTGTTTTGGATACGGCTCACTGGTAGAATCCTACC
ATAACAAAGCGAAATATGTTGAAGTGAATATCAATTATCGAAGAGTGTGG
AATGCATGGAATACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAAAGAC
AATTGAAAAACATGCAGTCAACGGAGTGATATATCCCATATATTCACAAA
AAGAAATTGAAGAGCTCGACCTTCGTGAACAAGGGTAAAGGTAAAGCTAA
CAGTTCTGCTTCATCTGAGGATAAAACGAGAGAAGCAAAAAGAAGAGGTT
TAAGGCTTAAACGAAACCATGCAAGATATGAAATTAGATTCATCTATGCT
TTTGTTCACTTATGTTCCAAACTGTGATGGAAATGCGCCTGAAGCTTGGT
TCCCAATTCTACAAAGTTACGTCGATTTATGTGCTAATGGATTTTTACGT
TTCCGCAAAGAAGAGCAACCACGCGATGCCAGCGACCCCGTTAGAAGATT
CTTGGACACCACTCATAAATGGTCAAAATACATGTTAAACGATCGTGTTT
TAGCACGTCGACCCTGGGTGAGCGAGAAAAATCAATTTGTGATTGATGAT
TACTTAGATGACGAGGATGACGTCAACGATATCCCGGCCGCTTTGTATCC
GACCGATTTTTCTGTCCGCTTCTTTAGAGAAATTCAAGAAGGACTTATGA
CGTGTGGTACTGACCGTAAAAGATATGTCTCCGATAATTCGATTTGTCAT
TAAGTTACTCGCGACTCGCCATCCCTCACGAAGACGTCAAAGTTTTGAAC
GAAGCTCACAAACAAACAAAACAGAAAATATGGCAGAAGCTGAAACAATA
AAGACTGCAGTAGCTTGGTGTTTTGGATACGGCTCACTGGTAGAATCCTA
CCATAACAAAGCGAAATATGTTGAAGTGAATATCAATTATCGAAGAGTGT
GGAATGCATGGAATACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAAAG
ACAATTGAAAAACATGCAGTCAACGGAGTGATATATCCCATATATTCACA
AAAAGAAATTGAAGAGCTCGACCTTCGTGAACAAGGGTAAAGGTAAAGCT
AACAGTTCTGCTTCATCTGAGGATAAAACGAGAGAAGCAAAAAGAAGAGG
TTTAAGGCTTAAACGAAACCATGCAAGATATGAAATTAGATTCATCTATG
CTTTTGTTCACTTATGTTCCAAACTGTGATGGAAATGCGCCTGAAGCTTG
GTTCCCAATTCTACAAAGTTACGTCGATTTATGTGCTAATGGATTTTTAC
GTTTCCGCAAAGAAGAGCAACCACGCGATGCCAGCGACCCCGTTAGAAGA
TTCTTGGACACCACTCATAAATGGTCAAAATACATGTTAAACGATCGTGT
TTTAGCACGTCGACCCTGGGTGAGCGAGAAAAATCAATTTGTGATTGATG
ATTACTTAGATGACGAGGATGACGTCAACGATATCCCGGCCGCTTTGTAT
CCGACCGATTTTTCTGTCCGCTTCTTTAGAGAAATTCAAGAAGGACTTAT
GACGTGTGGTACTGACCGTAAAAGATATGTCTCCGATAATTCGATTTGTC
ATTAAGTTACTCGCGACTCGCCATCCCTCACGAAGACGTCAAAGTTTTGA
ACGAAGCTCACAAACAAACAAAACAGAAAATATGGCAGAAGCTGAAACAA
TAAAGACTGCAGTAGCTTGGTGTTTTGGATACGGCTCACTGGTAGAATCC
TACCATAACAAAGCGAAATATGTTGAAGTGAATATCAATTATCGAAGAGT
GTGGAATGCATGGAATACAAAAGCACGTGCAACTTTCCTTGGTCTTGAAA
AGACAATTGAAAAACATGCAGTCAACGGAGTGATATATCCCATATATTCA
CAAAAAGAAATTGAAGAGCTCGACCTTCGTGAACAAGGGTAAAGGTAAAG
CTAACAGTTCTGCTTCATCTGAGGATAAAACGAGAGAAGCAAAAAGAAGA
GGTTTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040781XLOC_040781Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065048-exon-scaffold_428-1575043694:382550..382621TCONS_00065048-exon-scaffold_428-1575043694:382550..382621Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1575043694:377201..377481TCONS_00065048-exon-scaffold_428-1575043694:377201..377481Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1575043694:375115..375165TCONS_00065048-exon-scaffold_428-1575043694:375115..375165Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1575043694:371131..371646TCONS_00065048-exon-scaffold_428-1575043694:371131..371646Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1510915933:382550..382621TCONS_00065048-exon-scaffold_428-1510915933:382550..382621Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1510915933:377201..377481TCONS_00065048-exon-scaffold_428-1510915933:377201..377481Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1510915933:375115..375165TCONS_00065048-exon-scaffold_428-1510915933:375115..375165Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1510915933:371131..371646TCONS_00065048-exon-scaffold_428-1510915933:371131..371646Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1491911889:382550..382621TCONS_00065048-exon-scaffold_428-1491911889:382550..382621Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1491911889:377201..377481TCONS_00065048-exon-scaffold_428-1491911889:377201..377481Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1491911889:375115..375165TCONS_00065048-exon-scaffold_428-1491911889:375115..375165Clytia hemisphaericaexon
TCONS_00065048-exon-scaffold_428-1491911889:371131..371646TCONS_00065048-exon-scaffold_428-1491911889:371131..371646Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065048-proteinTCONS_00065048-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_428supercontigscaffold_428:371131..382621 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.0543 2.8962 2.80362 1.60864 5.7819 5.88895 2.17605 2.83825 0.210824 0 0 0 0 0 0.872575 0.245092 0.789749 0.245338 0 0 0 0 1.24031 0.437968 0.355632 0 1.44876 0.77839 0.309115 0.347009
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065048 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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