|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065028 ID=TCONS_00065028|Name=TCONS_00065028|organism=Clytia hemisphaerica|type=transcript|length=1087bp
GTAAAGAGATCTATTTATCGTTCAGCAGTGTTAATAGTAACTGAATTAGT
TGTTGACATCATTCAACTATACGTGTATAAAGTTTGTAGGTGTATTTTTC
AGTGATGATGGAGATACAGCTAGATATAATTTTTAAGGGTGAAATTTAAA
GTGTCTAGCAAATGGTTACCAACTGCCAATATACATTACAAAATGCAATA
ACATCTctgtattttgaaattttagaagtATAGAATCATGCCTGTTATAA
ATTtggatgcaaaaaaaaaaagagcttGGATATACACAGAAAACACACAG
TGCATTTGCACATTTTCTGGTGACAACTCATCTGACTGCTGGTGTGTGGT
GAGAATGAAAGTGAACCAGAAACTGATTCCTCAAACAGCCAACAAAGTGG
AACAGATGTAGAAATGATTGTTGCTGATGTTATTGAAAGTGATGACGAAC
AACAGACTGTTGATGTCTGAACATGTTGATGGCGATGCTCTTCAGCAAGA
TACAGAGtgagtgattcttataaatccCTTAAAAGCAGTAGTAATTTTTA
CTGTAATTGTGGTgtaaaaattgcttttaaatttttcacataCCCAGGCG
GTGTCAGTTCGATTATCTGACTAATCGGACTTAATTGAACcctatcgaac
gatagctgttcgattacagATCCCAACCGAACACCTATTGATCCgagaaa
acttttgtaaagtttgatgactgttcgatagaccttttcgccttcccatc
cgccatattgaaaattatggtggccgaattgctgtggtgaaattccctta
gcttagaaagtatgcaaaacatatgcaaaaaagAAGTATTAATATAGAAC
TTACATGCACAATTGGCATTacattaaagtgtaatcttgttgaagaaaga
ttaaatttgcttctcttgaaatctaaaaataattatattcactcatctct
tagaacaagcacttcaaaaaaccataacattagacataaactcaagctaa
ATAATCTCCAGCAAAGTATGGAACGCCGTAGCTGCCTTATGTGATAAAAT
attcgattatgcgataaaaTATTCGATAAACTctttc Run BLAST on NCBI transcript from alignment at scaffold_428:547269..548406+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065028 ID=TCONS_00065028|Name=TCONS_00065028|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at scaffold_428:547269..548406+ (Clytia hemisphaerica)
GTAAAGAGATCTATTTATCGTTCAGCAGTGTTAATAGTAACTGAATTAGT
TGTTGACATCATTCAACTATACGTGTATAAAGTTTGTAGGTGTATTTTTC
AGTGATGATGGAGATACAGCTAGATATAATTTTTAAGGGTGAAATTTAAA
GTGTCTAGCAAATGGTTACCAACTGCCAATATACATTACAAAATGCAATA
ACATCTctgtattttgaaattttagaagtATAGAATCATGCCTGTTATAA
ATTtggatgcaaaaaaaaaaagagcttGGATATACACAGAAAACACACAG
TGCATTTGCACATTTTCTNCAAGAGCTTGGATATACACGGAAAACACACA
GTGCATTTGCACATTTTCTGGTGACAACTCATCTGACTGCTGGTGTGTGG
TGAGAATGAAAGTGAACCAGAAACTGATTCCTCAAACAGCCAACAAAGTG
GAACAGATGTAGAAATGATTGTTGCTGATGTTATTGAAAGTGATGACGAA
CAACAGACTGTTGATGTCTGAACATGTTGATGGCGATGCTCTTCAGCAAG
ATACAGAGtgagtgattcttataaatccCTTAAAAGCAGTAGTAATTTTT
ACTGTAATTGTGGTgtaaaaattgcttttaaatttttcacataCCCAGGC
GGTGTCAGTTCGATTATCTGACTAATCGGACTTAATTGAACcctatcgaa
cgatagctgttcgattacagATCCCAACCGAACACCTATTGATCCgagaa
aacttttgtaaagtttgatgactgttcgatagaccttttcgccttcccat
ccgccatattgaaaattatggtggccgaattgctgtggtgaaattccctt
agcttagaaagtatgcaaaacatatgcaaaaaagAAGTATTAATATAGAA
CTTACATGCACAATTGGCATTacattaaagtgtaatcttgttgaagaaag
attaaatttgcttctcttgaaatctaaaaataattatattcactcatctc
ttagaacaagcacttcaaaaaaccataacattagacataaactcaagcta
aATAATCTCCAGCAAAGTATGGAACGCCGTAGCTGCCTTATGTGATAAAA
TattcgattatgcgataaaaTATTCGATAAACTctttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065028-exon-scaffold_428-1491911889:547269..547579 | TCONS_00065028-exon-scaffold_428-1491911889:547269..547579 | Clytia hemisphaerica | exon |
| TCONS_00065028-exon-scaffold_428-1510915933:547269..547579 | TCONS_00065028-exon-scaffold_428-1510915933:547269..547579 | Clytia hemisphaerica | exon |
| TCONS_00065028-exon-scaffold_428-1575043694:547269..547579 | TCONS_00065028-exon-scaffold_428-1575043694:547269..547579 | Clytia hemisphaerica | exon |
| TCONS_00065028-exon-scaffold_428-1491911889:547631..548406 | TCONS_00065028-exon-scaffold_428-1491911889:547631..548406 | Clytia hemisphaerica | exon |
| TCONS_00065028-exon-scaffold_428-1510915933:547631..548406 | TCONS_00065028-exon-scaffold_428-1510915933:547631..548406 | Clytia hemisphaerica | exon |
| TCONS_00065028-exon-scaffold_428-1575043694:547631..548406 | TCONS_00065028-exon-scaffold_428-1575043694:547631..548406 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_428 | supercontig | scaffold_428:547269..548406 + |
Blast
The following BLAST results are available for this feature:
|
