TCONS_00065005 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065005
Unique NameTCONS_00065005
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1882

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065005 ID=TCONS_00065005|Name=TCONS_00065005|organism=Clytia hemisphaerica|type=transcript|length=1882bp
GCTTTTTTAACGAATTATTCTATGGTTAAAGTTAGGATTCAACATACTAA
GACACTAACTGACGCTACTAACGTTAAAGTTTTTGCATTTATTTTGAAGG
TTTAagcaaaataagagaaaaagaaaatatactaTTGCAACCTTTTACTT
GGAATCAAGCATGGGAAACCCGAATCCAGAAATACAATATACCAAGCTTT
TCATCAACAACGAGTGGTGTGATTCGATCAGTGGCAAAACATTCCCAACA
ATCAACCCTGCAACTGGAAAAGTCATCTGTCATGTACAAGAGGGAGATAA
GGCTGACATTGACAAAGCAGTAGAAGCTGCTCGCAAAGCTTTTGCAATCA
AGTCACCATGGAGGAGTATGCATGTTGCCCAAAGAGGAGTACTTCTTAAT
AAATTAGCTGATCTTCTCCAAAGAGATCTGAAANAAGAGGAGTACTTCTT
AATAAATTAGCTGATCTCCTCCAAAGAGATCTGAAACGAATTGCTAGTAT
TGACACGATAGACAACGGCAAACCGTACCGTGATGCGGAAGGTGACGTGG
AACATTCTATCGACGTCTTGCGTTATTTCGCCGGATGGTCGGATAAAGTG
TTCGGAAAGACTATCCCCATAGCTGAAAACGAATGGTTTTGCTTCACAAA
ACATCAACCTGTTGGTGTTGTCGGTCAAATCATCCCTTGGAATTATCCAG
TTTCCATGATGATATGGAAACTAGCTCCTGCACTAGCCTGCGGATGTACT
GTTGTTTTGAAGCCTGCTGAACAAACACCTTTATCTGCTCTTCATGTTGC
ATCGTTGATCAAAGAGGCTGGTTTCCCTGCTGGAGTTGTGAACATTGTGA
ATGGTTACGGGCCGACAGCTGGAGCTGCTATTTCTGAACACATGGATATC
AACAAAGTTGCCTTCACCGGATCTGTTGAGaTTGGAAAAATCGTTATGCA
GGCTGCAGCCAAATCCAATTTGAAACGAGTCTTCTTGGAGCTTGGTGGCA
AAAGTCCTTTGATTGTTTTTCCTGATGTTGATGtggACTGGGCAGTATTG
CAAGCCCATGAAGCCATTATGGAAAATCACGGCCAGAACTGTTGTGCCGG
CTCACGTACATTTGTTCATGAAGATATTTACGATCAGTTTGTGGAGAAAG
CAACCGCGTGTGCGGCCGCGCGTGTTGTTGGTGATCCTTTCAATGATATC
ACACAACAAGGACCTTTGATCAATGATACGCAACACGAAAAAGTCCTTGG
TTTGATTCAAACTGGTATCAAGGAAGGTGCCTCCTTGAAATATGGTGGAG
AGAGAGTTGGGAACGAGGGTTATTTTGTTCAACCGACTGTTTTTGCTGAC
GTCACTGATGAAATGACCATTGCTAAACAAGAGATTTTTGGACCCGTTCA
ATCCATCTTGAAATTCAAAGACATCGACGAAGTGATTGCAAGAGCAAATG
CCACCGCATACGGATTAGGATCTGGAGTTTTGACCAAAGACATTGATAAA
GCAATGAAAGTTGTGAATGGGATTGAAGCGGGAACTGTCTGGGTGAATTG
TTACAACTACACACATCCTCAATGTCCGTTCGGTGGTTTCAAACAATCTG
GTCATGGAAGAGAACTGGGAAAATACGCGCTGAAGGAATACACCGAAGTT
AAACAGGTGACGATGAAACTTTACAACCAATGATCAGGCGTTGGCGAGTC
TTCTTATGGACAGTTTCTTTGAGTGAAGGAGTGATCGTGACGAGATGGCG
AATGATCGAATTATCTCACAAGGGGATGGCGCTGGATGGATTCTTTTGCC
CTCAcctttcaaaaatgattttgtagactttttataagaatagtttttgt
acaaaaagaaaagtcaaatttaaaatgaaatg
Run BLAST on NCBI

transcript from alignment at scaffold_428:202716..214004+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065005 ID=TCONS_00065005|Name=TCONS_00065005|organism=Clytia hemisphaerica|type=transcript|length=11289bp|location=Sequence derived from alignment at scaffold_428:202716..214004+ (Clytia hemisphaerica)
GCTTTTTTAACGAATTATTCTATGGTTAAAGTTAGGATTCAACATACTAA GACACTAACTGACGCTACTAACGTTAAAGTTTTTGCATTTATTTTGAAGG TTTAagcaaaataagagaaaaagaaaatatactaTTGCAACCTTTTACTT GGAATCAAGCATGGGAAACCCGAATCCAGAAATACAATATACCAAGGTTT GTATTCATTTTCTGGTTTGCACTGATAGTGTGAATTCTAAACTAAGATTT TTTGACTGGTTTTGCtagttttcttgaaaaaatttgttcgatgttcatga tttttcaaaatcacaaGCTTCCATTGGAAGTGTTACACAGAATTAAAACG CTCTGAAGCGCACTCGTATGTGAGCGTAGTGAAAAACTACACTGTTGCGG AGTATTACTGCGATGCGGAACNAGTGTGTGAGCGTAGCGAAAAACTACAC TGTTGCGGAATATTACTGCGATGCGGAACTCGGAAGTTTAGAAGTTTACC GAACTGAACTACGGTCTCGGAGACTTTGGACACGCATACGAGTCTATTAG TAGGGTGATACCCCTTTTGCCAGTGTAGGCATTACCCTATATATCTATCA CCTTTTTCGGTCTAGGCAGCAAGCTCCTAATAAGAATTTGACCGTTTTGA ACGATACCTTCCTCAGAAATACCCTTAAATTGTTTTAACTGTCTTTCCTC CATCCAGCTTTTCATCAACAACGAGTGGTGTGATTCGATCAGTGGCAAAA CATTCCCAACAATCAACCCTGCAACTGGAAAAGTCATCTGTCATGTACAA GAGGGAGATAAGGTGAACttctaaattttactggctaTCCCAGAACGTGA CTAAGATTGAAAGGGATTCCTCTGATGTTGACTTGTAGccttacacattt tttataagaacaaactatataagaacataatgctcTGCTGGCccaaatgt taagaacaagttaagaacattttaaggctttgcggactctaaaacacctg atttcttaggaaaatagacaaaaatgcttataaaatggtgaaaataagaa caaacctgtcaagaatatttttaggctgaaaattcaaaaatccggcttca aaaatttcgaatgttcttataaaaaaaacgcgtACGGAGTCCTGTCTTTA AATATCCCTCCTACCATGGTTCACCATCATTCAGAAAGGAATGGTTGACA GAGCTGGCTTTTCTCTGCCTCATTTAGAGGGTGTTaactttttgtgaaaa tgtttttgtgaaaaagtattttgtttacattatttTACTTTGAGAAAAGT GTGGACCTTCATAGCAAAATGAAAGACAAAGGTACTTTCAATACATGGAT TTTTTCCTGGAATATATTTCCGTGTATATCTGATACACCAGTACAAGTCA CTTGAGCTGCAAACGGCTAAATTTAATGATCGTGTACAAGATATCAGTTT GAACCACAAGTGACTTTGTACTTTAGAGATGCTGGCTAAATCGATCTGGC TAAATTGATCTGGCCAGCTAGGGTGCAgtacgaaatgcatatgctgttct accacccaaatctcctgagtgaatatagttggacagaaattcttatttct tcacaatTCTCACCCTCCTTCTTACAGGCTGACATTGACAAAGCAGTAGA AGCTGCTCGCAAAGCTTTTGCAATCAAGTCACCATGGAGGAGTATGCATG TTGCCCAAAGAGGAGTACTTCTTAATAAATTAGCTGATCTTCTCCAAAGA GATCTGAAANAAGAGGAGTACTTCTTAATAAATTAGCTGATCTCCTCCAA AGAGATCTGAAACGAATTGCTGTAAGTTTGATCATAAAGTTTCTAAAGAG AGGATATCGTAGCTGAAAGTTTGATGAGATATGTGGGCTTCCTTCGTCTT ATTCCGTCGTTTTTTTCAGAGATAGTGAAGTTAAGCATCCATTAGTGTGA AGACAGACTTCTCAAAATCTGATATTTACTCTACACCTCTTGCTTTAAAC CCTTTTCCCAGAGTATTGAATCTGATAATATTGCTAACCTTTTGCTTTAA CCCTCTCTTTTTGCAGAGTATTGACACGATAGACAACGGCAAACCGTACC GTGATGCGGAAGGTGACGTGGAACATTCTATCGACGTCTTGCGTTATTTC GCCGGATGGTCGGATAAAGTGTTCGGAAAGACTATCCCCATAGCTGGTGA GTTAAACCTCCAAATGTTTGATAGCTAACTTAATTGGGGGTAAGATTTAA ATGAtttcgtgatattcatgacgtaatgttttatacgaaagcacccaaaa aagactGGGTGCTTGACACTAATTTTGAATCCAAACAAAACTAGTTGCAA ACACCCAGGCTTTTTGGATGCTTCTGTAAAAAgatattacgtcatgaata ttatgAATTCGCTCCTCCGTTACGTTTTCCAAAAGtggaaaaatcatttt caagccTGACTTTGGTCAGGAATGTCGACGACTATTTACATTGTAGAAAA TAGCCAACAAATAATGCAAGGGGCAAATTGTAGTTTAGACAAACTggtat tatcccgtaacaattgTCGTATTATCATTTTACACCCATATTACTATATT ACACGGaatataaacgactccagtctagacTAACCCTTTTTGTGTTTTCA GAAAACGAATGGTTTTGCTTCACAAAACATCAACCTGTTGGTGTTGTCGG TCAAATCATCCCTGTAAGAAATATTGTTTTCCTTCTCCAATAGAGTCTTT GAGTGTTTGGAAATACTCTTAATACCCAATAGCTAAAAGAATTTGTGTCA GCTGAAAACATTGTCAAAGATCAATAAACCGAATAAGGTACAGGGGGTTG gggataaaattgaaaaattagctAAGGGAGGGGACGTCTATTAGGTGTCC GAGTATGGTCTTTATGACTTTTATTACCTTAAATGTGACAATACAGTTTA AAAATCGCCTTTCGTTCTACTGTCTAGCTGATAGCCCAGAGTTTACGATG ACATgtgcttttgttttgaattgaatcttTCCATCTCATATCACTTTTCT CTTTCAGTGGAATTATCCAGTTTCCATGATGATATGGAAACTAGCTCCTG CACTAGCCTGCGGATGTACTGTTGTTTTGAAGCCTGCTGAACAAACACCT TTATCTGCTCTTCATGTTGCATCGTTGATCAAAGAGGTAGGTTAAGCTTA ACAACAGCCTGGACATCccagctttattttctttattttcttacttTGAT GTTTCTGCTATTTAAAGCTTGGTCTGCCTAGATTCTTGTACACCCGAGGT CGGTAAATTATTAGTTATGCGAAATATTTGAATTGAGAAAGCACACGTGT GCTGCTTTCTGCCTGCGGTAaaccaaaaacatcaaaattaaaaaaaaaag tttacaccTTAACAGACGTAGATTTGAACTTGAAAGGCAACCTAGCATAT TAATTTTTGAatgtgatatttttatttcaacaaTGCTTGTTGAATTCTTT GAGTGCTAATTTCATGCCTTAAAATTGGTCCAAATGATTAAGCAATACTC ATCTACACCCCAGTACTTGAAGGTAATAGATGCAGTTCAGGAAACTTTGG CCGTAAAAATTGGGGAAAGGTCGTCTATCAAATCGTGAAAGAATCTCCgg taataaaaaatgttttttgtcaTCAAAACAGGCTGGTTTCCCTGCTGGAG TTGTGAACATTGTGAATGGTTACGGGCCGACAGCTGGAGCTGCTATTTCT GAACACATGGATATCAACAAAGTTGCCTTCACCGGATCTGTTGAGGTAGA ATTTGCATTGAACGAAAATCGACTTCTAAAGAGAGTTTTCTATTTATTCA TTATCGCTTTAGTtcactgtttttttttcctttttgtccaTGAAGCTTAT AACCTGATTGAAATTCATACTTCATTTTGTTATCTTTTGGGATTTTAGCA GCACGTCTATCTGGTTCATATTGATTTAGGGATTTTTTGCGAACGCATTG CGGGTCCGTCCTGAATTCATCTTTCAAATTAACTATCaatcatatatatt tttctttttaacagaTTGGAAAAATCGTTATGCAGGCTGCAGCCAAATCC AATTTGAAACGAGTCTTCTTGGAGCTTGGTGGCAAAAGTCCTTTGATTGT TTTTCCTGATGTTGATGGTGAGAATTAAGCCCTGACTACTATTCTATTTG TTAGAGAAAAAGGAGACAGAATTcagcagttaaaatctttgtttggaAAA TATGACGTCAAAAGACGTCAAAAGAGTTCAATGGATTGACTTTAGACAAC CATCTGTCTGGTCCACTTATTCGAAAAGTTAACTATTTTGCCTATTCTCA TCATAAAAGGTCAAACCAACGTTTTCGTATTTTACAGCTTTTTAATTAAC TGTGTGGAAGCAATGATCGAGGTTTTTAGTACGAGTTATTTTTGTTGTAG GTATGGTTTTGTCCGTATTAACCAAAGCCGGCTGCAATATaccttttgga aattttctttatCATGTTTTCTTCTTCTAGactctttttcaaaacattgg gCTGTTCCGTAAAagttccatacaggggggtggacgaaccatTTCATgcc aaaacaaatttcttggaaatgtgtggatacccctaGAAAGTAGTAAAGTT TGCAAAAAGATccttgtaaaaaattattttcatgccATAAAGGTGGATGA ACAGAATATCAGTGGTTCTCCCCCTGGAAatttaagaataactttttacc ccctggaaaaatgaaaaaaaaacacttctttagaccacatggaaattctt ctcgtattaccccctggaaatgctCTTCCATCCCCCTGTATGGTTATAac ctggaatggcccattttcatattgtgaatttaatttttcttttagtggAC TGGGCAGTATTGCAAGCCCATGAAGCCATTATGGAAAATCACGGCCAGAA CTGTTGTGCCGGCTCACGTACATTTGTTCATGAAGATATTTACGATCAGT TTGTGGAGAAAGCAACCGCGTGTGCGGCCGCGCGTGTTGTTGGTGATCCT TTCAATGATATCACACAACAAGGACCTTTGGTAAGAACTTTCAAATGTCA AATCGATCAAAACTAAACTTTTTGAATTGAAGGTCAACAACATTTATTGG CGCCGAGCATCCATCCTCCTTCCTCTTTGTTGGTTTGTGGGAGACTGTTA AGGGTTTCTACCTTGGACTCGGTGAAGCCCTGGTCACCATCCATTCTTTG CTACTTGAAGACATATAACAAATCTTAAGTTTCTTTACCTCGAACGTCTa caactcaaatgtctccttaactcaaacaattTTACTGTCACTAAATGTTa taggaaagaaattttggaatAATTTAAGTGTATGATTATCTCAACCCAAC AGTTTTtctgtaactttttttctataattctTTCAGATCAATGATACGCA ACACGAAAAAGTCCTTGGTTTGATTCAAACTGGTATCAAGGAAGGTGCCT CCTTGAAATATGGTGGAGAGAGAGTTGGGAACGAGGGTTATTTTGTTCAA CCGACTGTTTTTGCTGACGTCACTGATGAAATGACCATTGCTAAACAAGA GGTAAGGGGAATAGGACGAGttatggacatgttttttaattgtttcgttt ttagcattttcaaaaaagctaaattttgattgggaTAACTTGGAGGTCcg aaattttcacaggatgttaGTAGTGATGATAGGACCCCAAAAAGTTCTTT TCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTAAAATTA ACTTTACACCTAGtctaatttttgctaaattcagcTCATTTTGAGACCTA GGAACATAAAATAACCTCATGAAGTTCTTTCAATTGTGTATAAAACAGTA ATGATAACTTATTTGATGTTCAAAACCTTTTCAGGGTCCAGAATCGAgca aatatttaacattttccgtaaaatgctaaaatactgcTCGTTTTTGGTCC ATTTAACTATGACAAAGATCACAAAAAAGACTTTTAAAGCTCCATGAATG ATCCAAGCATCAAATAGCGCCTAAATGAGCTATGAAATAACAATAACCTT CGGGTAATCAAATTTTAGCATAAAAACATGGCCTTCAAGAACTCTAAGTC CACTCTATGCTAAATTTTTGCTCATAAAAGGACCCTAGAATGCTTTATAT CGACCAAATTtggtttttctatctttttgaatGCCTCAAGTATACATAAT ATCAATATCAtagttcttttgtgtttatcctAACTGTGCTagttgattaa aaaaaagccacaCCCAATGCTAAAGACATGCTCATAATGGGACCATACAA CCATTTTTAATGATTGCTTATGTTGGTATATTGATCTTATAAGGTATAAA AAGGTATGTGCAAAGCATTAGAGTCATAGCAGAAAAATTGAGAGAGATAC AAGCCTCTAAATCCAAATGCTAAGTATTTGCTCCCACTAAAATGCTAAGT ATTGGCTCATATTTGGACCGCACTTTGTTGAAGCATAAGTCATGAAATAT TTAAGCTTTAGAAAAAATTCCTTTAAATTTTTAAAGTTCATCTTTTCCAC GCAACCATCATCAGGGCATAATTTCagttcattcattatattagaaatga atgatgatttcccaagacccctgaaaacgaaacaattaaaaaacatgtcc ttataGAGAGTTGGGAACGAGGTATTTTTCGTTCAACCGACTGTTTTTGC TGACGTCACTGATGAGATGACCATTGCTAAACAAGAGGTAAGGGGAATGG GACAGTTATAAAGAGTTGGGAACGATGTATTTTTCGTTCAACCGACTGTT TTTGCTGACGTCACTGATGAAATGACCATTGCTAAACAAGAGGTAAGGAG AATGGGATGAGTTAAAGAGAGTTGGGAACGAGGTTATTTCGTTTAACCAA cagtttttgctgacgtcacTGACGAAGTGGTCAATAAGAGGTAAGGTGGT GTCGGAAAGAAGGTTTTGAGCGAAACTTGTATGACAACTCCATACAAGAT TCCCTACGGTCTGAGTGATTCCTCTGATGAAAACTTGAGTTTTTTTTGTT CTCTCTACCTTCTTAGATTTTTGGACCCGTTCAATCCATCTTGAAATTCA AAGACATCGACGAAGTGATTGCAAGAGCAAATGCCACCGCATACGGATTA GGATCTGGAGTTTTGACCAAAGACATTGATAAAGCAATGAAAGTTGTGAA TGGGATTGAAGCGGGAACTGTCTGGTAGGTTGCTTAGCTTCTTGGTTGCA CACTGACAGTATTTTCCATTTcgtcttttcttctttttttttctgaattg gTCCGGGCTTGAGCGAAAGGAAGTTTCAATTATGTTTTCAAAACAACTGA GCTAGCTCAATTGCTTGTCATaaccagtggcgtggtggcaggggggggca ggggggccaggccccccagcagagcccttttgagaaggggcgcccaaaaa taagggacgccaagaaggatttttcaggcgcccatatcgaaagattgaca aatgaaaaaacaaaaatggcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNataatga gcgtatagagaggggcgccaaaaacaaaaaatctttaaaaagggcgccat atttgccttggccaccccagaggaattttcccaccacgccactggtcATA ACACCCTTACTTAGCAGACTGCCTTATCTATGAAAACTACAGGGATAATC AATCTTGAATTTGTAGGATCATAGACTAGAGTATTTTTATCTTGAATTTA TAATGTCGCTGGATAAAGTAATAAGTAGTAAAATGTTCAcccattttgtt caaaaattctttcaaatccaAAGGCCTCTGATTGTTTCTcctcttccctt taattttatCACATTCATAAGCTGGACCGTTGTCTTCCAAGTGATTTTTT GTGTTGTTCTTTTGGTTTTGAATTAGATATCTCACTGCTTCCTTGCTTGT TGTACCCCATTTTCAttagacaggagaaccgtcctgtatttttttataat ctggtgtatacaggacgggtatgacctgtTAGGCACAaatctgcctcaaa aaatttataatgggaaattcgaatttagcgctgccctcacttactaaaac taaaaccaaatttcggaaattGCACTTTCTCTTAGAAattgtgaccagta aaagaataacaaaatttgattggctatgttttcaaccgttattaggatct gggaaattcaaactctcagcccatgccatgctatatatttcgccatcagc atatagaataagaaatcatagcatggatctccaggctacatTTTCATCTG TTATGATTCCGAGGAACACCGCTAGCCTCGATTTTAAGTATTACGCCAAA ATTAATGAAAAGATTGCTCAAATTCCACCATTTTTTAATAAACAGGGTGA ATTGTTACAACTACACACATCCTCAATGTCCGTTCGGTGGTTTCAAACAA TCTGGTCATGGAAGAGAACTGTAAGTAAACATCCTACTCGTTCAATTATT ACAGTCGAAAGAAATAGCgtaataaaatatatttcaaggCTTTTAGTCAT AGCTTCTGACTTTTCAGCCACTCATCCATCGCTCCTAAAATCACCACTGA AAGTTTGGTTAGGGTTATTTGAAACAATttaagatattcaattttgttgt tctgtaaggGTTCTTGTTCTTGGGgagattcaaaatttcaatttatcaTT ACCATACACATCTGACATCGGGAtgagtttttataaaatattttacttat tggtcatttgaagttaTAGAGATGAtactttctttagaaaaagtaaaaag attttattaaaggtTAAAGAATTTATTACAGGTTATTGACCAACCAAATA AAATAAGAGCTTCTAAAGAATCCAGTATGACATCGATATTTAAACCAATA AGAACCATCACAACAAATATGACATGTATCAAAAAATGACGATATTTCTT TTTCCAGGGGAAAATACGCGCTGAAGGAATACACCGAAGTTAAACAGGTT CGTTTGATTTTAGTGATGTTGTACCGTGAATTGCTATGGTCGGCAGGCCA CGCACCTTTCTCAAATATTTGGCGAATTTTAATTTTGTAATAGCTAAGTC ACAAATTATTGATCCGTTTTGCTCCTAAACGAAAATGAAGCTCTACTATT GTTTAGAAGTGATGTAAGAAAggaatttaaccaatagaatgccttaattt tgtttcggagcgaaacggaaccgtagcgtGTGAACGTGCTCTGACTCATT CGATTTTCCATTGGTCGCCTGattataaatattttcagaaGAGCGGATTC TGAACTGGGGAACAACTGACTCGGAGGCAACTCGGTATATTACCGTTCTT ATGGCTAACTATCCAAAAGTTCACTCAACATTTCCGCTGAAAATGCAAAT TACTGAATATTTTTGAGATATGAACCAATCCGAACCAAGTTGGTTGCTCA TAAAAACTCTTCCAAATTATGTCCCAGCTTGTTTAAACTTGTTTCTAATT GGCAGTTCAACAGCAGTCAGGTTGTGCTAAGCAAGCGGTCCGGGCTCGAT TCGCGGAGGTGTTATATGTTATCTAACCCTTTATACTATGTACAGCTTGT TGTATAAGGCAGCTCAGCTCTCTATCCAATTTCGGTTGGTAAATGGGTGC CACTACTTCTGCAATCAGTGGGTCAATCGCGGGGTTTTCGGCGCTGTGTT GGCTTCGCCAAAAGTGAAATACTGTAAGACTTGCTACAACAATCCTACCC CCGGGTCATATGATTAGCCAATGTAGCTTCTCAGTTACGGAAACagctaa ttcatgatatgcaccactggagagtcttctgagaacttttgaaatttttc acccaatacgtcacttaaacaatagaaaaagtgacgtattggatggaaaa tttaaaagttctcagaagactctccagtagtgcatatcatgaattgattg ATTGTACCGCAGCACTGTCCGAAATTAATGCTTTGACGCGtttaaacttt tggattgttagcCTTAAGTATAGTAACCAATTCTTCTTTCTTGTCGCCTC TTGAAAAAACACTCTGAAACAAACAGGAGAAATATGTGaaattttgttta ttatttCCTTCAGGTGACGATGAAACTTTACAACCAATGATCAGGCGTTG GCGAGTCTTCTTATGGACAGTTTCTTTGAGTGAAGGAGTGATCGTGACGA GATGGCGAATGATCGAATTATCTCACAAGGGGATGGCGCTGGATGGATTC TTTTGCCCTCAcctttcaaaaatgattttgtagactttttataagaatag tttttgtacaaaaagaaaagtcaaatttaaaatgaaatg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040754XLOC_040754Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065005-exon-scaffold_428-1491911889:202716..202911TCONS_00065005-exon-scaffold_428-1491911889:202716..202911Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:202716..202911TCONS_00065005-exon-scaffold_428-1510915933:202716..202911Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:202716..202911TCONS_00065005-exon-scaffold_428-1575043694:202716..202911Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:203423..203527TCONS_00065005-exon-scaffold_428-1491911889:203423..203527Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:203423..203527TCONS_00065005-exon-scaffold_428-1510915933:203423..203527Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:203423..203527TCONS_00065005-exon-scaffold_428-1575043694:203423..203527Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:204343..204536TCONS_00065005-exon-scaffold_428-1491911889:204343..204536Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:204343..204536TCONS_00065005-exon-scaffold_428-1510915933:204343..204536Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:204343..204536TCONS_00065005-exon-scaffold_428-1575043694:204343..204536Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:204782..204911TCONS_00065005-exon-scaffold_428-1491911889:204782..204911Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:204782..204911TCONS_00065005-exon-scaffold_428-1510915933:204782..204911Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:204782..204911TCONS_00065005-exon-scaffold_428-1575043694:204782..204911Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:205367..205428TCONS_00065005-exon-scaffold_428-1491911889:205367..205428Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:205367..205428TCONS_00065005-exon-scaffold_428-1510915933:205367..205428Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:205367..205428TCONS_00065005-exon-scaffold_428-1575043694:205367..205428Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:205773..205901TCONS_00065005-exon-scaffold_428-1491911889:205773..205901Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:205773..205901TCONS_00065005-exon-scaffold_428-1510915933:205773..205901Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:205773..205901TCONS_00065005-exon-scaffold_428-1575043694:205773..205901Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:206397..206510TCONS_00065005-exon-scaffold_428-1491911889:206397..206510Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:206397..206510TCONS_00065005-exon-scaffold_428-1510915933:206397..206510Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:206397..206510TCONS_00065005-exon-scaffold_428-1575043694:206397..206510Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:206780..206882TCONS_00065005-exon-scaffold_428-1491911889:206780..206882Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:206780..206882TCONS_00065005-exon-scaffold_428-1510915933:206780..206882Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:206780..206882TCONS_00065005-exon-scaffold_428-1575043694:206780..206882Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:207611..207795TCONS_00065005-exon-scaffold_428-1491911889:207611..207795Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:207611..207795TCONS_00065005-exon-scaffold_428-1510915933:207611..207795Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:207611..207795TCONS_00065005-exon-scaffold_428-1575043694:207611..207795Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:208152..208316TCONS_00065005-exon-scaffold_428-1491911889:208152..208316Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:208152..208316TCONS_00065005-exon-scaffold_428-1510915933:208152..208316Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:208152..208316TCONS_00065005-exon-scaffold_428-1575043694:208152..208316Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:210332..210489TCONS_00065005-exon-scaffold_428-1491911889:210332..210489Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:210332..210489TCONS_00065005-exon-scaffold_428-1510915933:210332..210489Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:210332..210489TCONS_00065005-exon-scaffold_428-1575043694:210332..210489Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:212061..212135TCONS_00065005-exon-scaffold_428-1491911889:212061..212135Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:212061..212135TCONS_00065005-exon-scaffold_428-1510915933:212061..212135Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:212061..212135TCONS_00065005-exon-scaffold_428-1575043694:212061..212135Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:212623..212662TCONS_00065005-exon-scaffold_428-1491911889:212623..212662Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:212623..212662TCONS_00065005-exon-scaffold_428-1510915933:212623..212662Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:212623..212662TCONS_00065005-exon-scaffold_428-1575043694:212623..212662Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1491911889:213779..214004TCONS_00065005-exon-scaffold_428-1491911889:213779..214004Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1510915933:213779..214004TCONS_00065005-exon-scaffold_428-1510915933:213779..214004Clytia hemisphaericaexon
TCONS_00065005-exon-scaffold_428-1575043694:213779..214004TCONS_00065005-exon-scaffold_428-1575043694:213779..214004Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_428supercontigscaffold_428:202716..214004 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
80.2287 74.2983 79.7015 77.243 16.863 14.5037 9.83804 16.5247 24.3311 16.3149 35.7252 41.6246 113.001 129.841 66.024 78.7789 31.1658 33.5192 51.5527 45.24 17.8252 19.1705 33.8159 38.9349 35.6388 35.9971 11.2387 12.4445 83.6387 62.6196
Blast
BLAST of TCONS_00065005 vs. Swiss-Prot (Human)
Match: ALDH2 (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0
Identity = 257/423 (60.76%), Postives = 324/423 (76.60%), Query Frame = 1
Query:  415 SPKR---SEXRGVLLNKLADLLQRDLKRIASIDTIDNGKPYRDAE-GDVEHSIDVLRYFAGWSDKVFGKTIPIAENEWFCFTKHQPVGVVGQIIPWNYPVSMMIWKLAPALACGCTVVLKPAEQTPLSALHVASLIKEAGFPAGVVNIVNGYGPTAGAAISEHMDINKVAFTGSVEIGKIVMQAAAKSNLKRVFLELGGKSPLIVFPDVDVDWAVLQAHEAIMENHGQNCCAGSRTFVHEDIYDQFVEKATACAAARVVGDPFNDITQQGPLINDTQHEKVLGLIQTGIKEGASLKYGGERVGNEGYFVQPTVFADVTDEMTIAKQEIFGPVQSILKFKDIDEVIARANATAYGLGSGVLTKDIDKAMKVVNGIEAGTVWVNCYNYTHPQCPFGGFKQSGHGRELGKYALKEYTEVKQVTMKL 1671
            SP R   +  RG LLN+LADL++RD   +A+++T+DNGKPY  +   D++  +  LRY+AGW+DK  GKTIPI + ++F +T+H+PVGV GQIIPWN+P+ M  WKL PALA G  VV+K AEQTPL+AL+VA+LIKEAGFP GVVNIV G+GPTAGAAI+ H D++KVAFTGS EIG+++  AA  SNLKRV LELGGKSP I+  D D+DWAV QAH A+  N GQ CCAGSRTFV EDIYD+FVE++ A A +RVVG+PF+  T+QGP +++TQ +K+LG I TG +EGA L  GG    + GYF+QPTVF DV D MTIAK+EIFGPV  ILKFK I+EV+ RAN + YGL + V TKD+DKA  +   ++AGTVWVNCY+    Q PFGG+K SG GRELG+Y L+ YTEVK VT+K+
Sbjct:   91 SPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 512          

HSP 2 Score: 124.02 bits (310), Expect = 5.708e-30
Identity = 54/87 (62.07%), Postives = 69/87 (79.31%), Query Frame = 2
Query:  167 NPNPEIQYTKLFINNEWCDSISGKTFPTINPATGKVICHVQEGDKADIDKAVEAARKAFAIKSPWRSMHVAQRGVLLNKLADLLQRD 427
            N  PE+   ++FINNEW D++S KTFPT+NP+TG+VIC V EGDK D+DKAV+AAR AF + SPWR M  + RG LLN+LADL++RD
Sbjct:   29 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 115          
The following BLAST results are available for this feature:
BLAST of TCONS_00065005 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALDH25.708e-3060.76Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
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