TCONS_00064960 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00064960
Unique Name	TCONS_00064960
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2409

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_427:255988..265321-

transcript sequence

>TCONS_00064960 ID=TCONS_00064960|Name=TCONS_00064960|organism=Clytia hemisphaerica|type=transcript|length=2409bp
AGCAGTGTCAAGTTAGTTTGCTCTACTGCAGCCATCTTTGCCAAACTTTT
CTAGCTAAGTACTGACTTACcaatttactttttattttttattttttagc
tattaaaattttaaagttgAATCATGGAAGATATCTTTTCGGCTGCTAGA
GAAGGAAATGTTAAATTTGTCCGAACCTTTCTTGAAAACATTGAGAATGA
TTTGAATGAAGGTGATGATCATGGATTTACACCTTTGCATTGGGCATGTA
GAGAAGGtcaaatggttgtttttgaAATGTTGATGGCAAGAGGGGCACGT
CATAGTGCTAGAAACGATGGAGGGGATACACCTTTACATTTAGCTGCAGC
TCATGGTAATAAAGACATTGTAATCAAGCTTTTGCAACACAAAGCCAATG
TCAATTTAATGAATGAACATGGAAATACGCCATTGCATTATGCTTGTTTT
TGGAACATGGAAGGAATAGCTgtgGAACTGGTAAATAAAGGAGCTCATGT
ATCACAGTGTAACCGATACGATGAAACACCCCTCGATAAAGCTACtcaat
ttgtaaaaaatctgttgaGGGATAAAGCGAAACAAGGAGGACAAAAATTA
GAAAGGAAACCTTTTGAAGaaccAAAAGGTCTTCAAAATAGCAATTATGA
TTATTCGACGTTGAGAGGAGGAAGCACTGGTATAGACATCAATGAGATCC
ACCTGATGGAACGCATCAGTGAAAGTGTCAGTGGAGAGCTTTTCAAAGGT
GTTTGGAACAATGCACCAATTGTTGCGAAGAAGTTGAAAATTTATGGAAT
ACACAAGCGATTGGATCTTCACTTTAATGAAGAATACCCCCGTCTTAGGA
TATTTTCCCACCCAAATATTTTGCCAGTGATCAATGCAGTAACTAAGCAA
CCCAACCTTATGGTCATCAGTCAGTTCATGCCGTATGGTTCTTTATACGA
CGTCTTACACGAAGGATCAGGTATTATGTTGGACCAGGCACAAATTATCA
AATTTGCTTTCGACATTGCAAAGGGGATGGCATACTTTCACAGTTTAGAA
CCACTCATCCAAAAATATCATCTCAACAGTTTTCACATAATGGTTGACGA
AGACTTGACGGCACGAATCAGTATGCCTGACGTTCGATATTCCTTCCAAG
ACACTACAAAAGTACAAGCACCCAACTGGATGTCTCCTGAAATGTTACGA
CTGAATCCGGCATCAGTTGAACAACGTTCAGCTGATATGTGGAGTTTTGC
GATTGTCATGTGGGAATTAGCGACACGAGAAGTTCCTTACTCGTCACTAT
CACCCATGGAATGTGGAATGAAGatcGCGACGGAAGGATGTCGTCCACCT
TTACAACCGGGGATGCCACCGCAACTAAGCAAGTTGATATCACTTTGTTG
GAATGCTGACCCCACAAAACGACCTCGATTCGACCAGATCATGCCCATCT
TGCAGAAAATGTTATAGATTTCTTTTTGTGGTGTCCCGCTTTCcgaattt
aatttttaataaatttttacaaatatcTATTTTGTATATTGTAGATCGAT
TCTTTTTTCATCCTTTAATTTaacagattttttaaagctCTTTATACACT
AAGCAATCTTTAAGGTTTGTTTTATTCTGTCACGTCAAGTCCTCTTTGAA
ATGTATTTATTTATTAGTCACATAGAAAtccaatcatttttttattttgt
aacttttattttataaagtGAAAATATACTGTACAAATTTCAAGTCCTTC
ATACCTGCAACACCTTTATCATAGTTCTCTCACTTCAACATTTTGTCTTT
TCCTGTCTCTCTTATAATATCATTTTaatcttctttgtttttatttacag
gaaaaacagaaaatataatataaaaaatgaaaaatcgaaatttttcaaaa
actttctacTTCAGAAACAAGTTGCAAGAAGAACCATTCAATCTTTCTTT
TCAAACCTCGTGAAGAAAAATGTTTCGAACCAAAGGACTTTGCTTGTTGG
CTTTCATGGTGATACTTGTGGCGCTATCGCATGTAGATGCACGACCTTCC
AAATGCGTGACCAACTGCAGAATCAATTTGGACCAATGTTTCACTATTGC
GAGAGGATTCTCAGAAAAGTCCATCTGTTTCGAGGCGAAGAAGATCTGCA
AAAATAAATGCAAATTGATATCAAAGATTGGCAAATTATTGCGAGCAAAG
AAAATCTAATTTATCTTTATAGTAAAGCGTCGTCGTGTTCTGTTTCAACC
AAAGCTATTTATCTTCCTGtaattttatttgtattttattcattCTGTAA
ATAAAGAAGCAgattattttataaatattgtaaaagaaaaatttgtattt
attcaatttttatattttttagaatttatcgaataaattttcaaaagtga
aaTCGAAAT

Run BLAST on NCBI

transcript from alignment at scaffold_427:255988..265321-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00064960 ID=TCONS_00064960|Name=TCONS_00064960|organism=Clytia hemisphaerica|type=transcript|length=9334bp|location=Sequence derived from alignment at scaffold_427:255988..265321- (Clytia hemisphaerica)
AGCAGTGTCAAGTTAGTTTGCTCTACTGCAGCCATCTTTGCCAAACTTTT
CTAGCTAAGTACTGACTTACCAATTTACTTTTTATTTTTTATTTTTTAGC
TATTAAAATTTTAAAGTTGAATCATGGAAGATATCTTTTCGGCTGCTAGA
GAAGGAAATGTTAAATTTGTCCGAACCTTTCTTGAAAACATTGAGAATGA
TTTGAATGAAGGGTAAGTACTTTTGAATTTTATCTGATCCTGTTTAGAAA
TGTATAGCTTAAGTTGTGTTGTTGTTGTTATCCAACTCAAAAAAGATGGT
GTTCTGATTATTGCAAAGGAAATATTAAACAAAATTAAACAAAATTTCAA
AGTACTGTATACTGTATATTGTATATTTCTGTATTATTGACATAAGTTAG
CTAAGTTATAAATTGATCCTTATATTCTGACCAACTCGTACATTATTTCA
TATTAGTGATGATCATGGATTTACACCTTTGCATTGGGCATGTAGAGAAG
GTCAAATGGTTGTTTTTGAAATGTTGATGGCAAGAGGGGCACGTCATAGT
GCTAGAAACGATGGAGGGGATACACCTTTACATTTAGCTGCAGCTCATGG
TAATAAAGACATTGTAATCAAGGCAAGTCATATGATATGCTATTTATAGG
CAAAGGCTATTCTTTAGGTAATTGGGTTTATTTATGCTGTTTCGGTAAAA
AGAACCTAAAATAATCTGTTCTGAAAAAGATTATACACCTGAATACAGCT
GAACATCTTATTTCTCACTACAAAGTTTCATGTGAAATGCTTTTTATTTC
AATGAAATTATTTTCTATTTTTAAATGATAGCTTTTGCAACACAAAGCCA
ATGTCAATTTAATGAATGAACATGGAAATACGCCATTGCATTATGCTTGT
TTTTGGAACATGGAAGGAATAGCTGTGGTATGTTTTTTTTCTTTTTTTTT
CACTCAATAAGCTAGCATGACAACAAATTTATGTCACATGTGTTTGTTTT
TAAGGAACTGGTAAATAAAGGAGCTCATGTATCACAGTGTAACCGATACG
ATGAAACACCCCTCGATAAAGCTACTCAATTTGTAAAAAATCTGTTGAGG
GGTAAGCAGAACTTTCTTTCGTTGAATTATTTTCAAATATTATATATAAG
GAGATGTTATATGGAATAAAACCCCACATTTTTCTATTTTTTTATAGCAA
TAGTTTAAAATGGTTAAGGGAAATGTTTTCAAGAGAGTAAAAGTGGGGGT
TAGAGTGTAAGCATTTTTCTAAGCCAAGTCTTTTAACCTTTCTGGTATGG
CAGTAGGAAAGATCTAAAGAGGTCTAAAGATTTTCTTAATACCTTTGCTT
ACTATGAAATTGAAGTAGTTTTTTGAAGAGAATACCAACTATTGGCTATT
GATCTACTCAAAAGTGGATACAATCATTTTAAAATGCAAGAAATTTATAA
ATAAGGATGGTAGAACAGTGGTCCGAATATTTATGAATTTTTTGACTGGG
ATTTCTGGTTAATTGAATTTAAAATCGAGGCTTTTTTAAAGCCTACAGTA
TCTAAAAAGATACCGATCTTTAGAATAATTTAATTTTTTGTTACAGATAA
AGCGAAACAAGGAGGACAAAAATTAGAAAGGAAACCTTTTGAAGGTAAGC
AAATATTTCGTGAATAGTTGATTGGTGATTGAGCCTAAGCTTTTCCAGTC
AGCCAGATCAGAAAAAGTGTTTTTTCTTGATTTTCCTAAGATTTTCTCAT
TAGTTTTTCTCGTTTATTTTAAATTTAATAATGTTTTCTGATGACTAACT
GGATAGGTACATAAAAGTATCACTTGTTTAATTCTAAACTTAATTTGAAT
TTAATTTTTTTCCATCTTTTTCTTTTCAGAACCAAAAGGTCTTCAAAATA
GCAGTAAGTGTTCTTGTTTCAACTATTTTTGAAAACATTTTTCAGGTTTT
CTCTAAATTGGTATCAACAGAAATTACTTCACTGTAAAAAAAAAGGATTT
GATCAACAATTTGGATGATAAATGTTTGTATTTAGATTATGATTATTCGA
CGTTGAGAGGAGGAAGCACTGGTATAGACATCAATGAGATCCACCTGATG
GAACGCATCAGTGAAAGTGTCAGTGGAGAGGTAAATCACTCTCTTATAAG
AATTGAAAACAATCGGGAAGAGACGAGACAATGCTATCTTGAGTATTATG
ACATGCATATTTTAGCGATTTGTAAATTTGGCGTCCAAATATGACCGTTT
TGTAATTTTTTGGAGTTAATTTTCATTTAGCTTTTCAAAGGTGTTTGGAA
CAATGCACCAATTGTTGCGAAGAAGTTGAAAATTTATGGAATACACAAGC
GATTGGATCTTCACTTTAATGAAGAATACCCCCGTCTTAGGTAATTTTTA
ATTCATGGACCTACCCCGGTGGAGGTCCTATAAATTACCCATGTTCGTTC
CTGCGTGCGTGTGTTTGTGCGTTTGTTAGTTACCAGCTTTTCTCTTGATT
GGCTCTTTCACTCCTTATGAATTTTTGCACAAAGAGGCATAACTATAAAC
GAATGTGACAGAGCTTGATTTTCGGGAAAATTTTTTGTGGTAAATTTCAA
GGGTTTTTTGGACTTTCTGAAGTATTGGATCTTTTTTTTCTGATTTTTTG
CATGAAAGTAGGTAAAAGATGGCTCAAGCAGATTTTCTTCAAAGAAAAAA
ACGCATCTTTATCTATAAGAATCACTATTAATAAGCAGACATCAATGTTC
TTAGCCAAATTACTCAATTTATTGATGAGATAGATGTTCTTTTTGCTCGC
GAAGTCTTGAATATGAAAGAATATTTGTGTTTGAGCATGATTACATATGT
GTTAAATGCATAACGAGGTAGGTCCATAAAAGTATCGCTTGTTATTACAT
GCTTCAAATGCCAAATTATTTGTTTCTAATATTTCATTGGTCTATTTGTT
TTGCAGGATATTTTCCCACCCAAATATTTTGCCAGTGATCAATGCAGTAA
CTAAGCAACCCAACCTTATGGTCATCAGTCAGTTCATGCCGTATGGTTCT
TTATACGACGTCTTACACGAAGGATCAGGTATCTACTTCATATTCACCAC
ATCTCTTCGATATGTTTACAAAACTTTGATCAATGTTTTTATTCTTTGGG
TTTTTTCTATTTATTCAGGTATTATGTTGGACCAGGCACAAATTATCAAA
TTTGCTTTCGACATTGCAAAGGGGATGGCATACTTTCACAGTTTAGAACC
ACTCATCCAAAAATATCATCTCAACAGTTTTCACATAATGGTATACGAAG
TTTTATTACAACGAATATTTACAAATCATTAGAAAATCTAAGATATATGC
ACAACATTAAATTCAACTTTAAACTTTGTCATGAAATTTATTTCGACAGG
TTGACGAAGACTTGACGGCACGAATCAGTATGCCTGACGTTCGATATTCC
TTCCAAGACACTACAAAAGTACAAGCACCCAACTGGATGTCTCCTGAAAG
TAATGCATTTCAGTATTTTAGTTCATATTGCACATTTCTTGTGGTTTTCA
CTGCTTTTTAGAGACACTTCTTCCATTTTTTTAAAAAGACCTTGGTATTA
ATTGTACAAATGTTTCTTTCTTAAGATTTTGAAAACAAAACAAACAAAAC
TTATTTTGAACATCTTATTTTCAGTGTTACGACTGAATCCGGCATCAGTT
GAACAACGTTCAGCTGATATGTGGAGTTTTGCTATTGTCATGTGGGAATT
AGCGACACGAGAAGTTCCTTACTCGTCACTATCACCCATGGAATGTGGAA
TGAAGGTAAGGTTATTTTGCTGTATTGAGAGAGGAGCAATGCTTCCATCT
TTCCACGAAGTGCGCAGGAAGTTTGGTGAGCTTCGACCAGCTTTCAATTT
CATCAAATAATTTCATNAGTATGCCTGACGTTCGATATTCCTTCCAAGAC
ACTACAAAAGTACAAGCACCCAACTGGATGTCTCCTGAAAGTAATGCATT
TCAGTATTTTAGTTCATATTGCACATTTCTTGTGGTTTTCACTGCTTTTT
AGAGACACTTCTTCCATTTTTTGAAAAAGACCTTGGTATTAATTGTACCA
GATTGTACAAATGTTTCTTTCTTAAGATTTTGAAAACAAAAGAAACAAAA
CTTATTTTGAACATCTTATTTTCAGTGTTACGACTGAATCCGGCATCAGT
TGAACAACGTTCAGCTGATATGTGGAGTTTTGCGATTGTCATGTGGGAAT
TAGCGACACGAGAAGTTCCTTACTCGTCACTATCACCCATGGAATGTGGA
ATGAAGGTAAGGTTATTTTGCTGTATTGAGAGAGGAGCAATGCTTCCATC
TTTCCACAAAGTGCGCAGGAAGTTTGGTGAGCTTCGACCAGCTTTCAATT
TCATCAAATAATCCTCTTTGCTGTCGACATATTTTCAGCAAAACGATTTC
AGCTTTGAAATATTTAGCTATACTTGCTATGGCGACAGCAGAAGCCGTTT
TCACCATGTCATCTTCATTCTCCATCAAGGAGCACAAAATGTCTAAAAAA
TTCGCTTCGGTGAACGCGGCTCTCATACCATGACAATAAAGAGAGATGCT
GGCCACATGGTCAGCTGCTGTCGCCATGATATCTCCGTCCTGGTGGTGGA
GCAGGTCGAACAGTAATTGCAGACCTTCCATTATTGTGTATGTTGGCGAT
GTATTCAGGATATGGTCTTTCAAAACTATCATCTGAAATGCTGAGTCCAC
TTTCATTTTCGAATCTTCAATATTATTGAAGAAATGGATGGGTAATTTGA
AGTTTCTGATAGCTTTGTATTCTTTATCCAAGAGAAATTGAGTTAAGATT
TCACATGCCTTGAATCGGATAGATGGCTGTGTATGTGAAAGATATCTCAT
TACTGCACTAGGTGGAAAGCTACCAAACTTCTTCATTATTCGGATGCCAT
CTTTATTCTCGAAAAGTAAGCAAGCAATCGTTTGGTACACCTCCAGTTCA
ATTACCGGTTTCTCCGACTTGATTGCTACTTGCAAAATAATGTTGATACT
ATTCTTCTCCAGCGCGATCTTCTGTATAGTTTTGTTGGGAATGTTCGCAC
TACGTATACACAATTTTTGCATGGTTTTCAAGGCACTGGTCAACATTTCG
TCTGCCATTAAGAACGATTTCAAACTAGAATTCAACAAGTGTAAAAATAT
GTTTGAGCCCACCTCATCGGAGAGTGTGTAACTGGCCATCCTTAGAAGCA
CATTGAAGAATTCACCACCATAGTATTGTAGAACAGTGGACGAATTGCTT
GTGGTGAGGTTGACGATGTATTGCATGGGAAGACTTTTAGCCACGATCAT
GGTTTGTCGGTGCTCCCCACCAGCGATGGACCACAAAGCCCTCATGATCC
ATTCTTGCGATTCGTCTTTCTTCATCTTTTTCATTTGCTTCAACAACTCT
GCGATGGAACCACTCTCCATGAAATAAAGTTGCAGTTGTTTGTTCTTCAG
TGTGCTTGTGTAGATCACTTTGCAAACTTCTTTTAGAGTACCTTTTGTGT
GCATGCATGGCTGCAAAATATCGAAAATTTTTATCGAAATTAGTTTCATC
TGAATCGAACTACTCTCGTAAATGTAAAAGCGAAGAGTTTTCAAGGAAAC
GATTTGAAGCTCTTGATTTTCAGTTTTCTTTAACGTGTCAACAACGATGT
TCAGCAAACGGTTGTTTTGATCAAAGAACGATTGCATTGTTTCATTACCC
TTCAGAGATTTCAGGATGATTTCGAAGGAAGAAATTAAGAAATACTCGTC
TGTCGTCATTTCCATGAACTTGATTATGCGGAAAAAATTGTTCCGTTCCC
TCATTTTATTGGAAAAATCCTCTGCAAACCTTTGACAGCATTTTAGTATG
GTGAGAATGGTTGTCGAGATTTCTCTTTCTTTGAGGTTCTCCAATCGTTC
AGCTAAGATATCAATGATGTTGGCTTTGCTTAGCACTGTGTACGTCTCCT
GCTCGTTTTTGATTAATGTCTTTTCGATCAATTGCGTCAACATCAGTTCT
ATTTCAGGTTTGTCTTCGACTAATTCTGCTTTGTAAAGTTGTATGGTTTG
CTTGAAAAGAGTATCTACGTTTTCTTTATCGCATCCAGAACTTTTTGAAG
TCATTTCAACAAAGATCTGTAAAGAAACCATCTTCAGGTTTTCGTTCAAA
TTATCAGTGGAAATGTACTCGAACAAACGTTGCCATACCATTTCATAAAG
GTGCTCATAATTGTTGTTGATGATGTAGAGAAGAAGTTTGTTCTGGTGAT
TAATGAATGCGATGTCGATGATATCATTTTCATCCACATCCACCACTGTA
ATGTCTGCATTATACATCAACAAAACGCCCACTGTCTCTATGTGTCCCTC
TGCAAAAGCCAACCATAATGGCGTCACTTTCATTTCATCTTGAGTTTTTA
CCTCTAATCGTGACGGTTTGTTTTCGACCAGTCGGTTGACGGTTTTGAAG
AAGCCTTCGTATGCTGCATAATGCAAAGGCGTCCACCCTTTGTCGTCATG
TTCCTCTAATTCAAATTTGTCGTTTGTTGCTTTTTCCACACCACCATTAC
TACTGCCAGCCATCATCTCATTCTCATGTCTTCAGTTTTTACTTTTATCA
AATCGAAAACACACATAGTGAGTCAGCAGTGAGAGACGAGAGATTATTAA
TTGTTTTCTTCAACAATATTTTATAGAGAAAAAGTTGATAATTGCTTGCT
GTGTAATTGAATGTTCTTTTGAAGTATTTCCGCTTCTACAACACCCTCAG
GACCATTTGAAAATTATTTTCTAATCGCTTTGTGAAAATATGATAAAATT
GTCTCTTTTTCAATTTTTAGATCGCGACGGAAGGATGTCGTCCACCTTTA
CAACCGGGGATGCCACCGCAACTAAGCAAGTTGATATCACTTTGTTGGAA
TGCTGACCCCACAAAACGACCTCGATTCGACCAGATCATGCCCATCTTGC
AGAAAATGTTATAGATTTCTTTTTGTGGTGTCCCGCTTTCCGAATTTAAT
TTTTAATAAATTTTTACAAATATCTATTTTGTATATTGTAGATCGATTCT
TTTTTCATCCTTTAATTTAACAGATTTTTTAAAGCTCTTTATACACTAAG
CAATCTTTAAGGTTTGTTTTATTCTGTCACGTCAAGTCCTCTTTGAAATG
TATTTATTTATTAGTCACATAGAAATCCAATCATTTTTTTATTTTGTAAC
TTTTATTTTATAAAGTGAAAATATACTGTACAAATTTCAAGTCCTTCATA
CCTGCAACACCTTTATCATAGTTCTCTCACTTCAACATTTTGTCTTTTCC
TGTCTCTCTTATAATATCATTTTAATCTTCTTTGTTTTTATTTACAGGAA
AAACAGAAAATATAATATAAAAAATGAAAAATCGAAATTTTTCAAAAACT
TTCTACTTCAGGTATGTAGAAAATTTTTGTTCGATCTTCCCGTTAATTTA
TTGCCCTGTAATTACGTGGGTTAAGCTTAAGAAAGCCTGAGGCACATCAA
GAATTTTGATCACTGATTATCTGATCAGATATCACTTTCATGATAATATT
AATCCTTTGCCATATCTCTTGTTAAACAAATCGGCTCTCGCAGTTTGCCA
AACGATTTCCCAATCCCTATTTCTGTATTATGAATCAAATTAGGTCGGAA
ATGAATTGCAGTCGTTATTGAATAACCCTAAACAACGGAAAGAAGGGGCG
ACTTTTGATCATTCTAACGGTCTTGGGCATTTCCGTATCTCATCAAACAA
TTAATTTCGACAACGTCACAACACCATTTCCAATTAACTGTTATCATGAA
GTTGAATCTCTCTCGGCCTTAACTTGTACTTTTTTTGATTTTCTTTTGAT
GCTCGAGACTTTTTAATGATTTTATCTCAAATCATACAAACTTATCCTGA
TAAAATCTGTTGTGAACGACTAAGGTGATGGATGGGATTCCCTTTCTCTC
TCTTCCCTTACTCATGTTAAGCCACCATCTGTTGCAGACATTTTGATTCA
TCTCTTTTGAAGGGATGTTAATTTTGCTGGCTCCTCTCTAGGCTCAAACT
TTTCTTCCTTCCTTAATGCGTTGATTACTGGTGATGATTAGATGTTAAGT
TAATTTAAGTGATTATAGTAAGATAAGTAAATAGCTTTTCAATTACCTAA
AAACGCTAAACAAGAACATTATTGTTTTCAATTATCACGTTTTTTGATGA
AACATTAATATGCTTATCTAGCATCACCGAGAACCCCCTTGAATTCTTCA
CTTCTACATCTTAATCTTCAATGGGTAGACAGCTTATCAGGGGGTAATGA
TATCATCTTCTTAGATGTAGTAATTACGTAAACAAAAACAACAACAATGA
TTGAGCAGTATAAAAGGGGCGATCAATATTCTTCTGGCATCACTTCTCAT
CGTCTCTTCTCTCCATTAACATCATTGATAAGTAAAATTTTAAGTATTCA
TTCACTACTTCATCAAACACATTGTGGTGTGGTTTTCATTTGTCACAAGG
TAATTACATACATGCGTATTTCTATTGGAAATCATTATTCTCCAATCAAG
TCCGTTTTCCTTGTTTCGTGTTTGTTTCCATCTATATAAACACAACGTTC
TCTCATCATCGAATTATTTCTCTCTTTTTTCACTTCAGAAACAAGTTGCA
AGAAGAACCATTCAATCTTTCTTTTCAAACCTCGTGAAGAAAAATGTTTC
GAACCAAAGGTAAGCATCATCGCTTGTTATTTCAATCGAAATCTTTTGTT
TTTTTAGAGTGGATAACAATCGTTTTTTTTTCAAAACTTACATTTCTATG
GAAGTATTGTCGTTTTTGGGGTTGGGCTTTATTCTTAGTGTTCCCCCACT
TCTTTTGCAGGACTTTGCTTGTTGGCTTTCATGGTGATACTTGTGGCGCT
ATCGCATGTAGATGCACGACCTTCCAAATGCGTGACCAACTGCAGAATCA
ATTTGGACCAATGTTTCACTATTGCGAGAGGATTCTCAGAAAAGTCCATC
TGTTTCGAGGCGAAGAAGATCTGCAAAAATAAATGCAAATTGATATCAAA
GATTGGCAAATTATTGCGAGCAAAGAAAATCTAATTTATCTTTATAGTAA
AGCGTCGTCGTGTTCTGTTTCAACCAAAGCTATTTATCTTCCTGTAATTT
TATTTGTATTTTATTCATTCTGTAAATAAAGAAGCAGATTATTTTATAAA
TATTGTAAAAGAAAAATTTGTATTTATTCAATTTTTATATTTTTTAGAAT
TTATCGAATAAATTTTCAAAAGTGAAATCGAAAT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_040733	XLOC_040733	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_427	supercontig	scaffold_427:255988..265321 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.1882	29.5279	58.9474	64.1978	72.8764	58.5458	92.9901	101.21	67.936	86.6573	39.0828	38.9235	43.1475	40.556	40.9216	44.192	85.3697	89.1025	49.0386	56.1527	56.3863	58.7511	57.002	56.2203	16.0867	17.5941	63.4385	46.7704	53.7479	54.2299

Blast

[Close]

BLAST of TCONS_00064960 vs. Swiss-Prot (Human)
Match: ILK (Integrin-linked protein kinase OS=Homo sapiens GN=ILK PE=1 SV=2)

HSP 1 Score: 514.227 bits (1323), Expect = 1.717e-174
Identity = 244/450 (54.22%), Postives = 328/450 (72.89%), Query Frame = 1

Query:  124 MEDIFSAAREGNVKFVRTFLENIENDLNEGDDHGFTPLHWACREGQMVVFEMLMARGARHSARNDGGDTPLHLAAAHGNKDIVIKLLQHKANVNLMNEHGNTPLHYACFWNMEGIAVELVNKGAHVSQCNRYDETPLDKATQFVKNLLRDKAKQGGQKLERKPFEEP--KGLQNSNYDYSTLRGGSTGIDINEIHLMERISESVSGELFKGVWNNAPIVAKKLKIYGIHKRLDLHFNEEYPRLRIFSHPNILPVINAVTK--QPNLMVISQFMPYGSLYDVLHEGSGIMLDQAQIIKFAFDIAKGMAYFHSLEPLIQKYHLNSFHIMVDEDLTARISMPDVRYSFQDTTKVQAPNWMSPEMLRLNPASVEQRSADMWSFAIVMWELATREVPYSSLSPMECGMKIATEGCRPPLQPGMPPQLSKLISLCWNADPTKRPRFDQIMPILQKM 1461
            M+DIF+  REGN   VR +L+N ENDLN+GDDHGF+PLHWACREG+  V EML+ RGAR +  N G DTPLHLAA+HG++DIV KLLQ+KA++N +NEHGN PLHYACFW  + +A +LV  GA VS CN+Y E P+DKA   ++ LLR++A++ GQ L R P+++   KG   +     TL   S GID  +++ + +++E+ SGEL+KG W    IV K LK+     R    FNEE PRLRIFSHPN+LPV+ A      P+  +I+ +MPYGSLY+VLHEG+  ++DQ+Q +KFA D+A+GMA+ H+LEPLI ++ LNS  +M+DED+TARISM DV++SFQ   ++ AP W++PE L+  P    +RSADMWSFA+++WEL TREVP++ LS ME GMK+A EG RP + PG+ P + KL+ +C N DP KRP+FD I+PIL+KM
Sbjct:    1 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKDTFWKGTTRTRPRNGTLNKHS-GIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPILEKM 449

The following BLAST results are available for this feature:

BLAST of TCONS_00064960 vs. Swiss-Prot (Human)

BLAST of TCONS_00064960 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ILK	1.717e-174	54.22	Integrin-linked protein kinase OS=Homo sapiens GN=...	[more]

You are here

TCONS_00064960 (transcript) - C. hemisphaerica