TCONS_00064954 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064954
Unique NameTCONS_00064954
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1550

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064954 ID=TCONS_00064954|Name=TCONS_00064954|organism=Clytia hemisphaerica|type=transcript|length=1550bp
atttctcaaatttcttttcattcGTAGAAGAAATAATCGAAAACAACATG
AGGGCTGCATTTTTTATCTACGTTGGcctttttgtattttcgagTGGCAT
GGAAATCGCCTTTCGGCATCCCAAGTGGACCAAGATGGAAAGAAAGACAC
TCACTTATCTCCCTGAAGAAAATATGAACGCTAGTCAGATGATACGTTAC
CATGGCTACCCGTGCGAAATCCACAAAGTGGTGACAGATGACGGTTACAT
TTTGACTCTTCAACGAATCCCTCATGGACGTAATGGTGCCCCAAGCAATG
GCATTCCTGTCTTCCTTCAGCATGGTCTCATCGATTCTGCTGTCACTTGG
TTGAATAATCTGCCAGAGCAAAGTTTAGGATACATTCTGGCTGATGCAGG
gtATGATGTCTGGTTGGGAAATAGTAGAGGAAATACATATTCAAAAGCTC
ACACTAAATTCTCCGTTGATTCAGATGAATTTTGGGATTTCAGCTTCGAT
GAGATGGCAAAGTATGATTTACCGGCCAGTATAGATTACGTTTTGAAACA
AACTGGTCAACAACAACTTCATTACGTTGGACATTCACAAGGGACGATGA
TCGGTTTCATCGGGTTCGGTCAATCACCAGAACTTGGTAAAAAAGTGAAA
ACGTTTTCTGCACTTGCTCCAGTGGCAACAGTTGGTCACATCGAAGGTGC
CATGAAAGTACTCTCCTATTTCACTGGCGAAATTGTGTATCTTTTCAAGT
TGCTTGGAGTAAGGGAATTTTTCCCCAGCAATTTGTTGATGAAAGCCTTA
GCAGAGATTGTTTGTGCGACACACATCACGGAGAGTGCATGCGCTGACAT
CGTTTTCCTCATCACCGGCTTTGATACTAGTAACTTGAACGACACCAGGA
TCCCTGTGTATGTGGCTCACACTCCTGCTGGTACCTCCGTCAAGGATGTC
GTTCACTTTGCACAGCTggtgaaaagtcaaaaatttcaaatgtacGATTA
CGGCGAAAAGAAGAATATGGAGAAATACAATTCTcCAACACCCCCTCTTT
ACAACGTGACAAAGATGGAGACGCCAGTAGCTTTGTTCACCGGCTCACAG
GATTGGCTAGCGGATCCTTATGATGTTGACCACGGATTGAGGCCTCTTCT
GCCAAACATCATCCAGGATAAGAATCGCGACGAATGGAATCACATGGACT
TCGTGTGGGGTGAAGATGCTCATGAATATTTCTATCAAGATGTCTTGAAA
CTCATCGCTAAATACTCGTAAATTTGAACTAGGTATCAATGTTTTTCCTG
AAAGAGATAAAATGTTGAGCATGGTTGATTATATCATTGAATCCATTGAC
CACTTGCTTTAAGTGTGCGGTAATCTCTATTTTGCTTGTCATCTTTTACG
ATCAACGAAAAATGAAAAGTGAACTATTCGACTCTTACGCGCTACCTTCT
AGAAGCAGTAACACTCGATGCAAGAACGTTAAGGGAAAATAGTTATCTAA
AACCAGGAAACTTTTCATAAGTATTTTcgtaccaaaaatgaagtttttag
Run BLAST on NCBI

protein sequence of TCONS_00064954-protein

>TCONS_00064954-protein ID=TCONS_00064954-protein|Name=TCONS_00064954-protein|organism=Clytia hemisphaerica|type=polypeptide|length=422bp
FSNFFSFVEEIIENNMRAAFFIYVGLFVFSSGMEIAFRHPKWTKMERKTL
TYLPEENMNASQMIRYHGYPCEIHKVVTDDGYILTLQRIPHGRNGAPSNG
IPVFLQHGLIDSAVTWLNNLPEQSLGYILADAGYDVWLGNSRGNTYSKAH
TKFSVDSDEFWDFSFDEMAKYDLPASIDYVLKQTGQQQLHYVGHSQGTMI
GFIGFGQSPELGKKVKTFSALAPVATVGHIEGAMKVLSYFTGEIVYLFKL
LGVREFFPSNLLMKALAEIVCATHITESACADIVFLITGFDTSNLNDTRI
PVYVAHTPAGTSVKDVVHFAQLVKSQKFQMYDYGEKKNMEKYNSPTPPLY
NVTKMETPVALFTGSQDWLADPYDVDHGLRPLLPNIIQDKNRDEWNHMDF
VWGEDAHEYFYQDVLKLIAKYS
Run BLAST on NCBI

transcript from alignment at scaffold_427:91228..93830-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064954 ID=TCONS_00064954|Name=TCONS_00064954|organism=Clytia hemisphaerica|type=transcript|length=2603bp|location=Sequence derived from alignment at scaffold_427:91228..93830- (Clytia hemisphaerica)
ATTTCTCAAATTTCTTTTCATTCGTAGAAGAAATAATCGAAAACAACATG
AGGGCTGCATTTTTTATCTACGTTGGCCTTTTTGTATTTTCGAGTGGCAT
GGAAATCGCCTTTCGGCATCCCAAGTGGACCAAGATGGAAAGAAAGACAC
TCACTTATCTCCCTGAAGAAAATATGAACGCTGTAAGTTACTTTAATAAG
GAAATGTTTTTCCTAGAAACCTTTTTAAGATTCGAATTTTTATTTAACAT
CAGCGAACTCCATCATTTTTGTTGACAGAGTCAGATGATACGTTACCATG
GCTACCCGTGCGAAATCCACAAAGTGGTGACAGATGACGGTTACATTTTG
ACTCTTCAACGAATCCCTCATGGACGTAATGGTGCCCCAAGCAATGGCAT
TCCTGTCTTCCTTCAGCATGGTCTCATCGATTCTGCTGTCACTTGGTTGA
ATAATCTGCCAGAGCAAAGTTTAGGATACATTCTGGCTGATGCAGGGTGA
GTACAGCTCGTCTTTATTATTATTTACCAGATTATAAGCGAACATTCTGA
CTCCCTTCTTTCTACTAATGTCTCCATTTCTTCATTTTTAGGTATGATGT
CTGGTTGGGAAATAGTAGAGGAAATACATATTCAAAAGCTCACACTAAAT
TCTCCGTTGATTCAGATGAATTTTGGGATTTCAGGTACGTACTGCTCAAG
TTTTTTATCAAAGACCTATTTCTTAAACGCAACAAATGATATAATTACTG
AATATTCCATAGTTTCAGGGAGCGGTAAAATTCCCTTCAGAAAAAAATTT
TGTTGATTATGATTATTTGTAGATTATGATTATTTGTAGATTATGCTTTA
CTTTAAGATTTAGATAACCATATGATAGGTTTATTTTGACCACGATCAAA
TGATCAGCATTATATCCTTAGCTTCGATGAGATGGCAAAGTATGATTTAC
CGGCCAGTATAGATTACGTTTTGAAACAAACTGGTCAACAACAACTTCAT
TACGTTGGACATTCACAAGGTGATCCTAACTTATGACAGTTAAATTATCG
AGTCTTCTTTCAGCTCTTATCAAAGTCTAAAAACTCTTTTTGTTGTGTTA
TCTTTTATGAAAGACTGCCCCTTGTTGTTTCGCATTAGTAAACATTTTCA
ATTCACTTTTTTAGGGACGATGATCGGTTTCATCGGGTTCGGTCAATCAC
CAGAACTTGGTAAAAAAGTGAAAACGTTTTCTGCACTTGCTCCAGTGGCA
ACAGTTGGTCACATCGAAGGTGCCATGAAAGTACTCTCCTATTTCACTGG
CGAAATTGTGGTTAGTATGAATTTGTCACTTCTGATTTGCTTTCAAGTCG
ACCTAATATTCTATATATTTCGTAAGTTATATGACATACCGTCACAATGT
CTTTCCCATTGTTTAAAAGCTATTTCTTGTCTATTCTCTTATATTAGTAT
CTTTTCAAGTTGCTTGGAGTAAGGGAATTTTTCCCCAGCAATTTGTTGAT
GAAAGCCTTAGCAGAGATTGTTTGTGCGACACACATCACGGAGAGTGCAT
GCGCTGACATCGTTTTCCTCATCACCGGCTTTGATACTAGTAACTTGAAC
GACACCAGGATCCCTGTGTATGTGGCTCACACTCCTGCTGGTACCTCCGT
CAAGGATGTCGTTCACTTTGCACAGGTAAACAATGATCTTTGGTTCACAG
AATGCATACTTATAGAAAAAATATAAAATCATTTCCAGTGATTATTTGAA
TCAGTTTTGTGTCAGGATACAGTTTACTATTAAAAGAAACAGTATTCTTC
GATCATCTTGACGGAGCTCATAAAGCAATCTATAGTGCCCCACCCCACAT
CCAATGTTTTTACTACGATATCAAGGAGATGAAACGTAAATTACTTTTCC
TTTAGCTGGTGAAAAGTCAAAAATTTCAAATGTACGATTACGGCGAAAAG
AAGAATATGGAGAAATACAATTCTGTAAGTTGATTCATCTTAGGTACTTA
TCAATTGAGTGTACCATTTCACCTTCAATTTATTTTTGTAGTCAGTTGGA
AAGCTCAGTTGGTGAATTGGTTTTTTGTTTTGTTTAGCCAACACCCCCTC
TTTACAACGTGACAAAGATGGAGACGCCAGTAGCTTTGTTCACCGGCTCA
CAGGATTGGCTAGCGGATCCTTATGATGTTGACCACGGATTGAGGCCTCT
TCTGCCAAACATCATCCAGGATAAGAATCGCGACGAATGGAATCACATGG
ACTTCGTGTGGGGTGAAGATGCTCATGAATATTTCTATCAAGATGTCTTG
AAACTCATCGCTAAATACTCGTAAATTTGAACTAGGTATCAATGTTTTTC
CTGAAAGAGATAAAATGTTGAGCATGGTTGATTATATCATTGAATCCATT
GACCACTTGCTTTAAGTGTGCGGTAATCTCTATTTTGCTTGTCATCTTTT
ACGATCAACGAAAAATGAAAAGTGAACTATTCGACTCTTACGCGCTACCT
TCTAGAAGCAGTAACACTCGATGCAAGAACGTTAAGGGAAAATAGTTATC
TAAAACCAGGAAACTTTTCATAAGTATTTTCGTACCAAAAATGAAGTTTT
TAG

Coding sequence (CDS) from alignment at scaffold_427:91228..93830-

>TCONS_00064954 ID=TCONS_00064954|Name=TCONS_00064954|organism=Clytia hemisphaerica|type=CDS|length=10152bp|location=Sequence derived from alignment at scaffold_427:91228..93830- (Clytia hemisphaerica)
CCAACACCCCCTCTTTACAACGTGACAAAGATGGAGACGCCAGTAGCTTT
GTTCACCGGCTCACAGGATTGGCTAGCGGATCCTTATGATGTTGACCACG
GATTGAGGCCTCTTCTGCCAAACATCATCCAGGATAAGAATCGCGACGAA
TGGAATCACATGGACTTCGTGTGGGGTGAAGATGCTCATGAATATTTCTA
TCAAGATGTCTTGAAACTCATCGCTAAATACTCGTAACTGGTGAAAAGTC
AAAAATTTCAAATGTACGATTACGGCGAAAAGAAGAATATGGAGAAATAC
AATTCTTATCTTTTCAAGTTGCTTGGAGTAAGGGAATTTTTCCCCAGCAA
TTTGTTGATGAAAGCCTTAGCAGAGATTGTTTGTGCGACACACATCACGG
AGAGTGCATGCGCTGACATCGTTTTCCTCATCACCGGCTTTGATACTAGT
AACTTGAACGACACCAGGATCCCTGTGTATGTGGCTCACACTCCTGCTGG
TACCTCCGTCAAGGATGTCGTTCACTTTGCACAGGGACGATGATCGGTTT
CATCGGGTTCGGTCAATCACCAGAACTTGGTAAAAAAGTGAAAACGTTTT
CTGCACTTGCTCCAGTGGCAACAGTTGGTCACATCGAAGGTGCCATGAAA
GTACTCTCCTATTTCACTGGCGAAATTGTGCTTCGATGAGATGGCAAAGT
ATGATTTACCGGCCAGTATAGATTACGTTTTGAAACAAACTGGTCAACAA
CAACTTCATTACGTTGGACATTCACAAGGTATGATGTCTGGTTGGGAAAT
AGTAGAGGAAATACATATTCAAAAGCTCACACTAAATTCTCCGTTGATTC
AGATGAATTTTGGGATTTCAGAGTCAGATGATACGTTACCATGGCTACCC
GTGCGAAATCCACAAAGTGGTGACAGATGACGGTTACATTTTGACTCTTC
AACGAATCCCTCATGGACGTAATGGTGCCCCAAGCAATGGCATTCCTGTC
TTCCTTCAGCATGGTCTCATCGATTCTGCTGTCACTTGGTTGAATAATCT
GCCAGAGCAAAGTTTAGGATACATTCTGGCTGATGCAGGTTCTCAAATTT
CTTTTCATTCGTAGAAGAAATAATCGAAAACAACATGAGGGCTGCATTTT
TTATCTACGTTGGCCTTTTTGTATTTTCGAGTGGCATGGAAATCGCCTTT
CGGCATCCCAAGTGGACCAAGATGGAAAGAAAGACACTCACTTATCTCCC
TGAAGAAAATATGAACGCTCCAACACCCCCTCTTTACAACGTGACAAAGA
TGGAGACGCCAGTAGCTTTGTTCACCGGCTCACAGGATTGGCTAGCGGAT
CCTTATGATGTTGACCACGGATTGAGGCCTCTTCTGCCAAACATCATCCA
GGATAAGAATCGCGACGAATGGAATCACATGGACTTCGTGTGGGGTGAAG
ATGCTCATGAATATTTCTATCAAGATGTCTTGAAACTCATCGCTAAATAC
TCGTAACTGGTGAAAAGTCAAAAATTTCAAATGTACGATTACGGCGAAAA
GAAGAATATGGAGAAATACAATTCTTATCTTTTCAAGTTGCTTGGAGTAA
GGGAATTTTTCCCCAGCAATTTGTTGATGAAAGCCTTAGCAGAGATTGTT
TGTGCGACACACATCACGGAGAGTGCATGCGCTGACATCGTTTTCCTCAT
CACCGGCTTTGATACTAGTAACTTGAACGACACCAGGATCCCTGTGTATG
TGGCTCACACTCCTGCTGGTACCTCCGTCAAGGATGTCGTTCACTTTGCA
CAGGGACGATGATCGGTTTCATCGGGTTCGGTCAATCACCAGAACTTGGT
AAAAAAGTGAAAACGTTTTCTGCACTTGCTCCAGTGGCAACAGTTGGTCA
CATCGAAGGTGCCATGAAAGTACTCTCCTATTTCACTGGCGAAATTGTGC
TTCGATGAGATGGCAAAGTATGATTTACCGGCCAGTATAGATTACGTTTT
GAAACAAACTGGTCAACAACAACTTCATTACGTTGGACATTCACAAGGTA
TGATGTCTGGTTGGGAAATAGTAGAGGAAATACATATTCAAAAGCTCACA
CTAAATTCTCCGTTGATTCAGATGAATTTTGGGATTTCAGAGTCAGATGA
TACGTTACCATGGCTACCCGTGCGAAATCCACAAAGTGGTGACAGATGAC
GGTTACATTTTGACTCTTCAACGAATCCCTCATGGACGTAATGGTGCCCC
AAGCAATGGCATTCCTGTCTTCCTTCAGCATGGTCTCATCGATTCTGCTG
TCACTTGGTTGAATAATCTGCCAGAGCAAAGTTTAGGATACATTCTGGCT
GATGCAGGTTCTCAAATTTCTTTTCATTCGTAGAAGAAATAATCGAAAAC
AACATGAGGGCTGCATTTTTTATCTACGTTGGCCTTTTTGTATTTTCGAG
TGGCATGGAAATCGCCTTTCGGCATCCCAAGTGGACCAAGATGGAAAGAA
AGACACTCACTTATCTCCCTGAAGAAAATATGAACGCTCCAACACCCCCT
CTTTACAACGTGACAAAGATGGAGACGCCAGTAGCTTTGTTCACCGGCTC
ACAGGATTGGCTAGCGGATCCTTATGATGTTGACCACGGATTGAGGCCTC
TTCTGCCAAACATCATCCAGGATAAGAATCGCGACGAATGGAATCACATG
GACTTCGTGTGGGGTGAAGATGCTCATGAATATTTCTATCAAGATGTCTT
GAAACTCATCGCTAAATACTCGTAACTGGTGAAAAGTCAAAAATTTCAAA
TGTACGATTACGGCGAAAAGAAGAATATGGAGAAATACAATTCTTATCTT
TTCAAGTTGCTTGGAGTAAGGGAATTTTTCCCCAGCAATTTGTTGATGAA
AGCCTTAGCAGAGATTGTTTGTGCGACACACATCACGGAGAGTGCATGCG
CTGACATCGTTTTCCTCATCACCGGCTTTGATACTAGTAACTTGAACGAC
ACCAGGATCCCTGTGTATGTGGCTCACACTCCTGCTGGTACCTCCGTCAA
GGATGTCGTTCACTTTGCACAGGGACGATGATCGGTTTCATCGGGTTCGG
TCAATCACCAGAACTTGGTAAAAAAGTGAAAACGTTTTCTGCACTTGCTC
CAGTGGCAACAGTTGGTCACATCGAAGGTGCCATGAAAGTACTCTCCTAT
TTCACTGGCGAAATTGTGCTTCGATGAGATGGCAAAGTATGATTTACCGG
CCAGTATAGATTACGTTTTGAAACAAACTGGTCAACAACAACTTCATTAC
GTTGGACATTCACAAGGTATGATGTCTGGTTGGGAAATAGTAGAGGAAAT
ACATATTCAAAAGCTCACACTAAATTCTCCGTTGATTCAGATGAATTTTG
GGATTTCAGAGTCAGATGATACGTTACCATGGCTACCCGTGCGAAATCCA
CAAAGTGGTGACAGATGACGGTTACATTTTGACTCTTCAACGAATCCCTC
ATGGACGTAATGGTGCCCCAAGCAATGGCATTCCTGTCTTCCTTCAGCAT
GGTCTCATCGATTCTGCTGTCACTTGGTTGAATAATCTGCCAGAGCAAAG
TTTAGGATACATTCTGGCTGATGCAGGTTCTCAAATTTCTTTTCATTCGT
AGAAGAAATAATCGAAAACAACATGAGGGCTGCATTTTTTATCTACGTTG
GCCTTTTTGTATTTTCGAGTGGCATGGAAATCGCCTTTCGGCATCCCAAG
TGGACCAAGATGGAAAGAAAGACACTCACTTATCTCCCTGAAGAAAATAT
GAACGCTCCAACACCCCCTCTTTACAACGTGACAAAGATGGAGACGCCAG
TAGCTTTGTTCACCGGCTCACAGGATTGGCTAGCGGATCCTTATGATGTT
GACCACGGATTGAGGCCTCTTCTGCCAAACATCATCCAGGATAAGAATCG
CGACGAATGGAATCACATGGACTTCGTGTGGGGTGAAGATGCTCATGAAT
ATTTCTATCAAGATGTCTTGAAACTCATCGCTAAATACTCGTAACTGGTG
AAAAGTCAAAAATTTCAAATGTACGATTACGGCGAAAAGAAGAATATGGA
GAAATACAATTCTTATCTTTTCAAGTTGCTTGGAGTAAGGGAATTTTTCC
CCAGCAATTTGTTGATGAAAGCCTTAGCAGAGATTGTTTGTGCGACACAC
ATCACGGAGAGTGCATGCGCTGACATCGTTTTCCTCATCACCGGCTTTGA
TACTAGTAACTTGAACGACACCAGGATCCCTGTGTATGTGGCTCACACTC
CTGCTGGTACCTCCGTCAAGGATGTCGTTCACTTTGCACAGGGACGATGA
TCGGTTTCATCGGGTTCGGTCAATCACCAGAACTTGGTAAAAAAGTGAAA
ACGTTTTCTGCACTTGCTCCAGTGGCAACAGTTGGTCACATCGAAGGTGC
CATGAAAGTACTCTCCTATTTCACTGGCGAAATTGTGCTTCGATGAGATG
GCAAAGTATGATTTACCGGCCAGTATAGATTACGTTTTGAAACAAACTGG
TCAACAACAACTTCATTACGTTGGACATTCACAAGGTATGATGTCTGGTT
GGGAAATAGTAGAGGAAATACATATTCAAAAGCTCACACTAAATTCTCCG
TTGATTCAGATGAATTTTGGGATTTCAGAGTCAGATGATACGTTACCATG
GCTACCCGTGCGAAATCCACAAAGTGGTGACAGATGACGGTTACATTTTG
ACTCTTCAACGAATCCCTCATGGACGTAATGGTGCCCCAAGCAATGGCAT
TCCTGTCTTCCTTCAGCATGGTCTCATCGATTCTGCTGTCACTTGGTTGA
ATAATCTGCCAGAGCAAAGTTTAGGATACATTCTGGCTGATGCAGGTTCT
CAAATTTCTTTTCATTCGTAGAAGAAATAATCGAAAACAACATGAGGGCT
GCATTTTTTATCTACGTTGGCCTTTTTGTATTTTCGAGTGGCATGGAAAT
CGCCTTTCGGCATCCCAAGTGGACCAAGATGGAAAGAAAGACACTCACTT
ATCTCCCTGAAGAAAATATGAACGCTCCAACACCCCCTCTTTACAACGTG
ACAAAGATGGAGACGCCAGTAGCTTTGTTCACCGGCTCACAGGATTGGCT
AGCGGATCCTTATGATGTTGACCACGGATTGAGGCCTCTTCTGCCAAACA
TCATCCAGGATAAGAATCGCGACGAATGGAATCACATGGACTTCGTGTGG
GGTGAAGATGCTCATGAATATTTCTATCAAGATGTCTTGAAACTCATCGC
TAAATACTCGTAACTGGTGAAAAGTCAAAAATTTCAAATGTACGATTACG
GCGAAAAGAAGAATATGGAGAAATACAATTCTTATCTTTTCAAGTTGCTT
GGAGTAAGGGAATTTTTCCCCAGCAATTTGTTGATGAAAGCCTTAGCAGA
GATTGTTTGTGCGACACACATCACGGAGAGTGCATGCGCTGACATCGTTT
TCCTCATCACCGGCTTTGATACTAGTAACTTGAACGACACCAGGATCCCT
GTGTATGTGGCTCACACTCCTGCTGGTACCTCCGTCAAGGATGTCGTTCA
CTTTGCACAGGGACGATGATCGGTTTCATCGGGTTCGGTCAATCACCAGA
ACTTGGTAAAAAAGTGAAAACGTTTTCTGCACTTGCTCCAGTGGCAACAG
TTGGTCACATCGAAGGTGCCATGAAAGTACTCTCCTATTTCACTGGCGAA
ATTGTGCTTCGATGAGATGGCAAAGTATGATTTACCGGCCAGTATAGATT
ACGTTTTGAAACAAACTGGTCAACAACAACTTCATTACGTTGGACATTCA
CAAGGTATGATGTCTGGTTGGGAAATAGTAGAGGAAATACATATTCAAAA
GCTCACACTAAATTCTCCGTTGATTCAGATGAATTTTGGGATTTCAGAGT
CAGATGATACGTTACCATGGCTACCCGTGCGAAATCCACAAAGTGGTGAC
AGATGACGGTTACATTTTGACTCTTCAACGAATCCCTCATGGACGTAATG
GTGCCCCAAGCAATGGCATTCCTGTCTTCCTTCAGCATGGTCTCATCGAT
TCTGCTGTCACTTGGTTGAATAATCTGCCAGAGCAAAGTTTAGGATACAT
TCTGGCTGATGCAGGTTCTCAAATTTCTTTTCATTCGTAGAAGAAATAAT
CGAAAACAACATGAGGGCTGCATTTTTTATCTACGTTGGCCTTTTTGTAT
TTTCGAGTGGCATGGAAATCGCCTTTCGGCATCCCAAGTGGACCAAGATG
GAAAGAAAGACACTCACTTATCTCCCTGAAGAAAATATGAACGCTCCAAC
ACCCCCTCTTTACAACGTGACAAAGATGGAGACGCCAGTAGCTTTGTTCA
CCGGCTCACAGGATTGGCTAGCGGATCCTTATGATGTTGACCACGGATTG
AGGCCTCTTCTGCCAAACATCATCCAGGATAAGAATCGCGACGAATGGAA
TCACATGGACTTCGTGTGGGGTGAAGATGCTCATGAATATTTCTATCAAG
ATGTCTTGAAACTCATCGCTAAATACTCGTAACTGGTGAAAAGTCAAAAA
TTTCAAATGTACGATTACGGCGAAAAGAAGAATATGGAGAAATACAATTC
TTATCTTTTCAAGTTGCTTGGAGTAAGGGAATTTTTCCCCAGCAATTTGT
TGATGAAAGCCTTAGCAGAGATTGTTTGTGCGACACACATCACGGAGAGT
GCATGCGCTGACATCGTTTTCCTCATCACCGGCTTTGATACTAGTAACTT
GAACGACACCAGGATCCCTGTGTATGTGGCTCACACTCCTGCTGGTACCT
CCGTCAAGGATGTCGTTCACTTTGCACAGGGACGATGATCGGTTTCATCG
GGTTCGGTCAATCACCAGAACTTGGTAAAAAAGTGAAAACGTTTTCTGCA
CTTGCTCCAGTGGCAACAGTTGGTCACATCGAAGGTGCCATGAAAGTACT
CTCCTATTTCACTGGCGAAATTGTGCTTCGATGAGATGGCAAAGTATGAT
TTACCGGCCAGTATAGATTACGTTTTGAAACAAACTGGTCAACAACAACT
TCATTACGTTGGACATTCACAAGGTATGATGTCTGGTTGGGAAATAGTAG
AGGAAATACATATTCAAAAGCTCACACTAAATTCTCCGTTGATTCAGATG
AATTTTGGGATTTCAGAGTCAGATGATACGTTACCATGGCTACCCGTGCG
AAATCCACAAAGTGGTGACAGATGACGGTTACATTTTGACTCTTCAACGA
ATCCCTCATGGACGTAATGGTGCCCCAAGCAATGGCATTCCTGTCTTCCT
TCAGCATGGTCTCATCGATTCTGCTGTCACTTGGTTGAATAATCTGCCAG
AGCAAAGTTTAGGATACATTCTGGCTGATGCAGGTTCTCAAATTTCTTTT
CATTCGTAGAAGAAATAATCGAAAACAACATGAGGGCTGCATTTTTTATC
TACGTTGGCCTTTTTGTATTTTCGAGTGGCATGGAAATCGCCTTTCGGCA
TCCCAAGTGGACCAAGATGGAAAGAAAGACACTCACTTATCTCCCTGAAG
AAAATATGAACGCTCCAACACCCCCTCTTTACAACGTGACAAAGATGGAG
ACGCCAGTAGCTTTGTTCACCGGCTCACAGGATTGGCTAGCGGATCCTTA
TGATGTTGACCACGGATTGAGGCCTCTTCTGCCAAACATCATCCAGGATA
AGAATCGCGACGAATGGAATCACATGGACTTCGTGTGGGGTGAAGATGCT
CATGAATATTTCTATCAAGATGTCTTGAAACTCATCGCTAAATACTCGTA
ACTGGTGAAAAGTCAAAAATTTCAAATGTACGATTACGGCGAAAAGAAGA
ATATGGAGAAATACAATTCTTATCTTTTCAAGTTGCTTGGAGTAAGGGAA
TTTTTCCCCAGCAATTTGTTGATGAAAGCCTTAGCAGAGATTGTTTGTGC
GACACACATCACGGAGAGTGCATGCGCTGACATCGTTTTCCTCATCACCG
GCTTTGATACTAGTAACTTGAACGACACCAGGATCCCTGTGTATGTGGCT
CACACTCCTGCTGGTACCTCCGTCAAGGATGTCGTTCACTTTGCACAGGG
ACGATGATCGGTTTCATCGGGTTCGGTCAATCACCAGAACTTGGTAAAAA
AGTGAAAACGTTTTCTGCACTTGCTCCAGTGGCAACAGTTGGTCACATCG
AAGGTGCCATGAAAGTACTCTCCTATTTCACTGGCGAAATTGTGCTTCGA
TGAGATGGCAAAGTATGATTTACCGGCCAGTATAGATTACGTTTTGAAAC
AAACTGGTCAACAACAACTTCATTACGTTGGACATTCACAAGGTATGATG
TCTGGTTGGGAAATAGTAGAGGAAATACATATTCAAAAGCTCACACTAAA
TTCTCCGTTGATTCAGATGAATTTTGGGATTTCAGAGTCAGATGATACGT
TACCATGGCTACCCGTGCGAAATCCACAAAGTGGTGACAGATGACGGTTA
CATTTTGACTCTTCAACGAATCCCTCATGGACGTAATGGTGCCCCAAGCA
ATGGCATTCCTGTCTTCCTTCAGCATGGTCTCATCGATTCTGCTGTCACT
TGGTTGAATAATCTGCCAGAGCAAAGTTTAGGATACATTCTGGCTGATGC
AGGTTCTCAAATTTCTTTTCATTCGTAGAAGAAATAATCGAAAACAACAT
GAGGGCTGCATTTTTTATCTACGTTGGCCTTTTTGTATTTTCGAGTGGCA
TGGAAATCGCCTTTCGGCATCCCAAGTGGACCAAGATGGAAAGAAAGACA
CTCACTTATCTCCCTGAAGAAAATATGAACGCTCCAACACCCCCTCTTTA
CAACGTGACAAAGATGGAGACGCCAGTAGCTTTGTTCACCGGCTCACAGG
ATTGGCTAGCGGATCCTTATGATGTTGACCACGGATTGAGGCCTCTTCTG
CCAAACATCATCCAGGATAAGAATCGCGACGAATGGAATCACATGGACTT
CGTGTGGGGTGAAGATGCTCATGAATATTTCTATCAAGATGTCTTGAAAC
TCATCGCTAAATACTCGTAACTGGTGAAAAGTCAAAAATTTCAAATGTAC
GATTACGGCGAAAAGAAGAATATGGAGAAATACAATTCTTATCTTTTCAA
GTTGCTTGGAGTAAGGGAATTTTTCCCCAGCAATTTGTTGATGAAAGCCT
TAGCAGAGATTGTTTGTGCGACACACATCACGGAGAGTGCATGCGCTGAC
ATCGTTTTCCTCATCACCGGCTTTGATACTAGTAACTTGAACGACACCAG
GATCCCTGTGTATGTGGCTCACACTCCTGCTGGTACCTCCGTCAAGGATG
TCGTTCACTTTGCACAGGGACGATGATCGGTTTCATCGGGTTCGGTCAAT
CACCAGAACTTGGTAAAAAAGTGAAAACGTTTTCTGCACTTGCTCCAGTG
GCAACAGTTGGTCACATCGAAGGTGCCATGAAAGTACTCTCCTATTTCAC
TGGCGAAATTGTGCTTCGATGAGATGGCAAAGTATGATTTACCGGCCAGT
ATAGATTACGTTTTGAAACAAACTGGTCAACAACAACTTCATTACGTTGG
ACATTCACAAGGTATGATGTCTGGTTGGGAAATAGTAGAGGAAATACATA
TTCAAAAGCTCACACTAAATTCTCCGTTGATTCAGATGAATTTTGGGATT
TCAGAGTCAGATGATACGTTACCATGGCTACCCGTGCGAAATCCACAAAG
TGGTGACAGATGACGGTTACATTTTGACTCTTCAACGAATCCCTCATGGA
CGTAATGGTGCCCCAAGCAATGGCATTCCTGTCTTCCTTCAGCATGGTCT
CATCGATTCTGCTGTCACTTGGTTGAATAATCTGCCAGAGCAAAGTTTAG
GATACATTCTGGCTGATGCAGGTTCTCAAATTTCTTTTCATTCGTAGAAG
AAATAATCGAAAACAACATGAGGGCTGCATTTTTTATCTACGTTGGCCTT
TTTGTATTTTCGAGTGGCATGGAAATCGCCTTTCGGCATCCCAAGTGGAC
CAAGATGGAAAGAAAGACACTCACTTATCTCCCTGAAGAAAATATGAACG
CT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040731XLOC_040731Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064954-exon-scaffold_427-1575043694:93649..93830TCONS_00064954-exon-scaffold_427-1575043694:93649..93830Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1575043694:93335..93552TCONS_00064954-exon-scaffold_427-1575043694:93335..93552Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1575043694:93147..93239TCONS_00064954-exon-scaffold_427-1575043694:93147..93239Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1575043694:92812..92909TCONS_00064954-exon-scaffold_427-1575043694:92812..92909Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1575043694:92521..92666TCONS_00064954-exon-scaffold_427-1575043694:92521..92666Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1575043694:92156..92383TCONS_00064954-exon-scaffold_427-1575043694:92156..92383Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1575043694:91857..91925TCONS_00064954-exon-scaffold_427-1575043694:91857..91925Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1575043694:91228..91743TCONS_00064954-exon-scaffold_427-1575043694:91228..91743Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1510915933:93649..93830TCONS_00064954-exon-scaffold_427-1510915933:93649..93830Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1510915933:93335..93552TCONS_00064954-exon-scaffold_427-1510915933:93335..93552Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1510915933:93147..93239TCONS_00064954-exon-scaffold_427-1510915933:93147..93239Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1510915933:92812..92909TCONS_00064954-exon-scaffold_427-1510915933:92812..92909Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1510915933:92521..92666TCONS_00064954-exon-scaffold_427-1510915933:92521..92666Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1510915933:92156..92383TCONS_00064954-exon-scaffold_427-1510915933:92156..92383Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1510915933:91857..91925TCONS_00064954-exon-scaffold_427-1510915933:91857..91925Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1510915933:91228..91743TCONS_00064954-exon-scaffold_427-1510915933:91228..91743Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1491911889:93649..93830TCONS_00064954-exon-scaffold_427-1491911889:93649..93830Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1491911889:93335..93552TCONS_00064954-exon-scaffold_427-1491911889:93335..93552Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1491911889:93147..93239TCONS_00064954-exon-scaffold_427-1491911889:93147..93239Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1491911889:92812..92909TCONS_00064954-exon-scaffold_427-1491911889:92812..92909Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1491911889:92521..92666TCONS_00064954-exon-scaffold_427-1491911889:92521..92666Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1491911889:92156..92383TCONS_00064954-exon-scaffold_427-1491911889:92156..92383Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1491911889:91857..91925TCONS_00064954-exon-scaffold_427-1491911889:91857..91925Clytia hemisphaericaexon
TCONS_00064954-exon-scaffold_427-1491911889:91228..91743TCONS_00064954-exon-scaffold_427-1491911889:91228..91743Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064954-proteinTCONS_00064954-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_427supercontigscaffold_427:91228..93830 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.608492	0.748169	0.329506	0.32237	1.71253	2.11447	2.58503	2.64298	1.40453	2.87195	4.369	2.30818	10.9618	18.9671	45.8042	62.4714	12.3533	14.2495	46.8819	33.667	4.16943	3.06927	34.7629	39.5746	49.6801	41.4229	15.1274	19.0093	133.108	120.149
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000073AB_hydrolase_1
IPR029058AB_hydrolase
IPR025483Lipase_euk
Vocabulary: Molecular Function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
Blast
[Close]
BLAST of TCONS_00064954 vs. Swiss-Prot (Human)
Match: LIPG (Gastric triacylglycerol lipase OS=Homo sapiens GN=LIPF PE=1 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.100e-118
Identity = 191/371 (51.48%), Postives = 257/371 (69.27%), Query Frame = 3 
Query:  162 PEENMNASQMIRYHGYPCEIHKVVTDDGYILTLQRIPHGRNGAPSNGIP--VFLQHGLIDSAVTWLNNLPEQSLGYILADAGYDVWLGNSRGNTYSKAHTKXXXXXXXXXXXXXXEMAKYDLPASIDYVLKQTGQQQLHYVGHSQGTMIGFIGFGQSPELGKKVKTFSALAPVATVGHIEGAMKVLSYFTGEIVYLFK-LLGVREFFPSNLLMKALAEIVCATHITESACADIVFLITGFDTSNLNDTRIPVYVAHTPAGTSVKDVVHFAQLVKSQKFQMYDYGEK-KNMEKYNSPTPPLYNVTKMETPVALFTGSQDWLADPYDVDHGLRPLLPNIIQDKNRDEWNHMDFVWGEDAHEYFYQDVLKLIAK 1262
            PE  MN SQMI Y GYP E ++VVT+DGYIL + RIP+G+  + + G    VFLQHGL+ SA  W++NLP  SL +ILADAGYDVWLGNSRGNT+++ +  +S DS EFW FSFDEMAKYDLPA+ID+++K+TGQ+QLHYVGHSQGT IGFI F  +P L K++KTF ALAPVATV + +  +  L +       LFK + G + F+P N   + LA  VC+  +    C++ +F+I GFD+ N N +R+ VY++H PAGTSV+++ H+ Q VKS KFQ YD+G   +N   Y+   PP YNVT M  P+A++ G +D LADP DV   L P LPN+I  K    +NH+DF+W  DA +  Y D++ +I++
Sbjct:   29 PEVTMNISQMITYWGYPNEEYEVVTEDGYILEVNRIPYGKKNSGNTGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFIVKKTGQKQLHYVGHSQGTTIGFIAFSTNPSLAKRIKTFYALAPVATVKYTKSLINKLRFVPQS---LFKFIFGDKIFYPHNFFDQFLATEVCSREMLNLLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKFQAYDWGSPVQNRMHYDQSQPPYYNVTAMNVPIAVWNGGKDLLADPQDVGL-LLPKLPNLIYHKEIPFYNHLDFIWAMDAPQEVYNDIVSMISE 395
The following BLAST results are available for this feature:
BLAST of TCONS_00064954 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LIPG1.100e-11851.48Gastric triacylglycerol lipase OS=Homo sapiens GN=... [more]
back to top