TCONS_00064892 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064892
Unique NameTCONS_00064892
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length352

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064892 ID=TCONS_00064892|Name=TCONS_00064892|organism=Clytia hemisphaerica|type=transcript|length=352bp
agcacccgaaaACAGCCGGGCTTTGACCAGCACCACCACGCCTATCAAGA
ATTGAAGTACTCTAAAAAATTTCTTAGAAATTGGTAAAACATTTTGCAGC
TAAGCGAAGTAATAGCGGACAAGTATCAAGTAGAGAATGGCATGCATTTT
TCTACAGTCTGAATCAtattttataattgaaaattttgtattattgttta
ttattatttattagtttttggtATTCCTAAAATTTTGTATGAttggcttg
attttttgtaaataaagatATCATTTTGAGAATCTAAATTTCTGAGCAAT
ATTCTAAATTGAATCTTCATTTTTCCGGTTTTTTTAGGTAGGGTGACACC
CC
Run BLAST on NCBI

transcript from alignment at scaffold_425:94132..94483

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064892 ID=TCONS_00064892|Name=TCONS_00064892|organism=Clytia hemisphaerica|type=transcript|length=352bp|location=Sequence derived from alignment at scaffold_425:94132..94483 (Clytia hemisphaerica)
GGGGTGTCACCCTACCTAAAAAAACCGGAAAAATGAAGATTCAATTTAGA
ATATTGCTCAGAAATTTAGATTCTCAAAATGATatctttatttacaaaaa
atcaagccaaTCATACAAAATTTTAGGAATaccaaaaactaataaataat
aataaacaataatacaaaattttcaattataaaataTGATTCAGACTGTA
GAAAAATGCATGCCATTCTCTACTTGATACTTGTCCGCTATTACTTCGCT
TAGCTGCAAAATGTTTTACCAATTTCTAAGAAATTTTTTAGAGTACTTCA
ATTCTTGATAGGCGTGGTGGTGCTGGTCAAAGCCCGGCTGTtttcgggtg
ct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040697XLOC_040697Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064892-exon-scaffold_425-1491911889:94132..94483TCONS_00064892-exon-scaffold_425-1491911889:94132..94483Clytia hemisphaericaexon
TCONS_00064892-exon-scaffold_425-1510915933:94132..94483TCONS_00064892-exon-scaffold_425-1510915933:94132..94483Clytia hemisphaericaexon
TCONS_00064892-exon-scaffold_425-1575043694:94132..94483TCONS_00064892-exon-scaffold_425-1575043694:94132..94483Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:94132..94483 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.24048	0.725798	0.280907	0.82447	0.334571	0.264383	0.637933	0	0.836262	0.517923	0.502709	0.826152	1.65001	1.8849	0.281754	0.60473	2.04869	0.954474	0.263731	0.827928	2.6386	0.70201	0.568924	0.517234	0	0.475457	0	2.17835	0.275367	0.561111
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064892 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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