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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064869 ID=TCONS_00064869|Name=TCONS_00064869|organism=Clytia hemisphaerica|type=transcript|length=3681bp GCttaatttctgaattttaattagctttttcagataaaaacgcACCGGAA ATTTCACCTATCGTGATTAAGCAGGAAGGCATCTTAATTAGGATAATATA CTGCACCCAACAGAGCGAACAGCTCAAAATAAACATCGATCTAAACACCA GTTGAACGAACGCATCATTCAAAAGCAAGATTGAGATAGAGAGTCAAAGG CTTTGACGATTTTGGATAATTGACTACGATTATGATGCAGATTCATTTTG AGGCCAAAGTTTGACTTATGGATTGACTTGATCATTTACAACAAATAATC TGGATTTAAATGCTGTTCAAGTAGTTTTGCGTAAACGTCGTATACAGTAA ACGTTGTTTTTGCCTTGAAAACGATAACAACAATTTAATCAATCACAAAC AGAATGAATGAtcattttataaaattgttatcTTTCATGATCTTGATCAT CAGCACAAGTAACATTGTCGTAGAAGCTGCTAAAGGGAATAATGAAATCT ACAACTTGATGTGCGATCGAATATATTTCGAGCATCCACTTGAGCAAAAG ATACCCATCATAAATATGGTGTCTGCTATCTATGTTAAGTCAAATATTAT CAGCAACGGATTTCCTGTCTACAACAACGAACGAGGGGGTTCACAATTCT TTCTAAAGAATAACAACCGATTTGCATTCGCAAAAACTTACTTTTCTGGA CCGGACTCTGGCTTATATATTACTGGTTATGTATATCACCTAAACAATCC AAATTTATGGAAGAAAAGTATCAACAATACCTCCAAACCATTAGGGGACG TCTTTTATGGAAAATGGGGTTTCTACAAGTCATCAAAATACACCAGCATT GATATGACCGTTAAATGTGTGACAAGCTCAATGACAGACTGTGGATCGAA TTCAGTTGTTTTTACATCGGAAATTACAATGAATGGTACGACTGTTGTCA ATAATCCAACACTCAACAATTTTAATCCAATTCTGAATCGTTTCCAAAAC AACAGACGTGTTTATAAACATGATAACTTCAAAGTGACTGGTTTGTATTT ATTCTACCATTCGGGATATTGGATGTTTGGACCTGATCCAGAAAAATCCA GTGCATTTTTCATTGCCCAAAGCAATGCTGTTAAGCCAGAGTCACtgcaa aatggaaaaaaacagTAGGAGGCAAATGGGTCGAGTTTGATGCCCAAGTT CAATGTCGTGGACGAAAGAACTATAAACTAGATGATTGTTCAAGACAATG CAAAGGTGTTTGTCTTGAAAACAGTTTAAAGGAAACTGTATGTACATGCA AATATGGATACAGAGGTTGGGATTGCTCTTTCAAAGAAGATATAAATATT TGTGGACCTATTCCAGGTAACGCTCACGAAACTATCAATCGCGAGGAAGG AGCTGTAACTACAGAGTATTGCTGGGACAACTCGATTCGACCGCTTCTAT GCTACAGATACAATAACAAGCCACGATCATGGTATGGATACATATGTCCT CCACAACCGACAACCACGACAACTACAACCACAAGAAGGCCGTACACCTG GGTGCCACCACACACCTGGGTGCCACCACACAACGGGGGAGGTGAACGCA AAGAGAAGATCAATCTTGATGATGAACATGGTTTGAGCATTGCAATTCGA ATTCTTGTGCTTATGATACCAATTTTTCTGCCAATATTCCACTATTATTG CTACAAGCGTTATCGGAAGTCTAAAGAAAAGGATTTGCCAAGTGTCTTCA GTATCTACTCTTTGTATTTTTATTGCGGTGTCTTCTTCTGGCTTTTCATC ATGCTACTGAACTGGATTATTGATTTGAAAGATTATGGAAAAATTACAAT GGGATATGTTTTGACGGTAGCTTATGCATTAGCCGCGATAGGATACCTCT TTGTACTTTTCGAGTCGTGTTATTCAAGCGTTATGGGTTACTTGAAAATG AGCTTCGACAAACCAAACGCTGAACAATATGTTCGTTCATTGTTGGTGGA AAAACCATCTGTTGTAACTACCGCCGTGTGTTACCACTACGAGACGAGAT ACAGAACAGTATCCTATACAGATGCCAATGGAAATACTCAAACCAGAACA GAAACCTACCAAGAAAGAGTTAACACATGGACAGGTGCACATGTCTTCGA ATTTGATTACTGGCGAGATAATTCAGATACGACAAAGATCCCAAACCCTC AAATTGGTGAGATTTTACGCGTCAAATTGTCCAAAGAAATATCTTTCGCC AACGATGAGACTGCAAGGGAATTCACAGAGCAGACAACAAAGTTCGTTGA CGATAACCGATACAGAGATACGTTTATTGATTACGGAACCGACTTTCAAG TGGATGGGTTTGAAGAACACATGATAGCTTATGATCAAAACCAAGGAGTA CCGTGGTGGATGAATAAGTACTGTTTCGTGGTCAGTACTTTGTTCTGTTT ATCATGGCCGTTTCGGTGTTTGTTGAGACGTAAAACTAAGAAATATGCGT ACCAAGTTCTGAAGGAGATCTCTATCCTGCCACTTGAAGCTGTTACCAAT CAGCCATGCTCCCAGTCCGTCCCACCGCTACAACAACAACCTCCACCACA ATTTAACTCCCcttcacaacaacaacaaccaccaaCTGGATTTAATCAGC CACCCCAGTACTATCCATCTCAGCCCGTAACGAATAATGCCAACTATGAT GCGACAGATTTTGGTGGGCGACATCACCCTCAAGGAATGGCACCCAACCA ACCGCCCTATCCACCAACTGGTTGGGCAGGTGAAACACCTCCATCGTATG GAGATGCGATACAAATGAGTGAAGTGACATTCAACCCACAGACTGGTTTG CCAACAGCACCATCATCGGGTTATGGAAATCATGCCTATGTTCAATAATG ATGACAGTAGAAGGATCTTATAGAACAATTAATATTTGTATCTTCTTAAT AAACTTAAGTATGTTTAAAATGTATAATTACGTCAATTTACACAATGCGc ataattaaaattttcttatttctcatttcaaaattattatttACATCATT TTATTGTTAGGTGATAAAAGAACGCAACTTTTAAAATGTCTGGCCCCTGG TTGCATATGCGTATATTAAGCATAAATTTGAGCTTGATTCTAAATTACTC TTAAGCATAACTGAGCTTGGCTGTCTTCCAAAaatcatatgcttataaaa aacatgtagttacCGTATCTATTGAATGATCTTATAGAACaattaaattt atattttcttaataaaataaaatataccaAATGACACACAATTCACACAA ATATATTAAATTGTTATAGAACaattaaatttatattttcttaataaaat aaaatataccaAATGACACACAATTCACAGAAATATattaaatttcatat tttgtaaCATTATTTCATAATTGACATATTCTTTATATAATctgtaaaac ataaaaaatgaagcgactgcttaggtagaaattttcgtcatctttcgtga cttcatcagcatatAGCTCAACAAAAAGGATATCATCTTTATATAATCAA TATAATCGATTTCATTAAATGCGATTTCCAGAGGAATCGAACTCTTTTTG TAAAAACTCTACAATATTACAATTAATATAATATGttgtaaaaaaattgc aagaaattctttatatatctttatatatatt Run BLAST on NCBI protein sequence of TCONS_00064869-protein >TCONS_00064869-protein ID=TCONS_00064869-protein|Name=TCONS_00064869-protein|organism=Clytia hemisphaerica|type=polypeptide|length=411bp
MIPIFLPIFHYYCYKRYRKSKEKDLPSVFSIYSLYFYCGVFFWLFIMLLN WIIDLKDYGKITMGYVLTVAYALAAIGYLFVLFESCYSSVMGYLKMSFDK PNAEQYVRSLLVEKPSVVTTAVCYHYETRYRTVSYTDANGNTQTRTETYQ ERVNTWTGAHVFEFDYWRDNSDTTKIPNPQIGEILRVKLSKEISFANDET AREFTEQTTKFVDDNRYRDTFIDYGTDFQVDGFEEHMIAYDQNQGVPWWM NKYCFVVSTLFCLSWPFRCLLRRKTKKYAYQVLKEISILPLEAVTNQPCS QSVPPLQQQPPPQFNSPSQQQQPPTGFNQPPQYYPSQPVTNNANYDATDF GGRHHPQGMAPNQPPYPPTGWAGETPPSYGDAIQMSEVTFNPQTGLPTAP SSGYGNHAYVQ Run BLAST on NCBI transcript from alignment at scaffold_425:80215..84269- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064869 ID=TCONS_00064869|Name=TCONS_00064869|organism=Clytia hemisphaerica|type=transcript|length=4055bp|location=Sequence derived from alignment at scaffold_425:80215..84269- (Clytia hemisphaerica) GCTTAATTTCTGAATTTTAATTAGCTTTTTCAGATAAAAACGCACCGGAA
ATTTCACCTATCGTGATTAAGCAGGAAGGCATCTTAATTAGGATAATATA
CTGCACCCAACAGAGCGAACAGCTCAAAATAAACATCGATCTAAACACCA
GTTGAACGAACGCATCATTCAAAAGCAAGATTGAGATAGAGAGTCAAAGG
CTTTGACGATTTTGGATAATTGACTACGATTATGATGCAGATTCATTTTG
AGGCCAAAGTTTGACTTATGGATTGACTTGATCATTTACAACAAATAATC
TGGATTTAAATGCTGTTCAAGTAGTTTTGCGTAAACGTCGTATACAGTAA
ACGTTGTTTTTGCCTTGAAAACGATAACAACAATTTAATCAATCACAAAC
AGAATGAATGATCATTTTATAAAATTGTTATCTTTCATGATCTTGATCAT
CAGCACAAGTAACATTGTCGTAGAAGCTGCTAAAGGGAATAATGAAATCT
ACAACTTGATGTGCGATCGAATATATTTCGAGCATCCACTTGAGCAAAAG
ATACCCATCATAAATATGGTGTCTGCTATCTATGTTAAGTCAAATATTAT
CAGCAACGGATTTCCTGTCTACAACAACGAACGAGGGGGTTCACAATTCT
TTCTAAAGAATAACAACCGATTTGCATTCGCAAAAACTTACTTTTCTGGA
CCGGACTCTGGCTTATATATTACTGGTTATGTATATCACCTAAACAATCC
AAATTTATGGAAGAAAAGTATCAACAATACCTCCAAACCATTAGGGGACG
TCTTTTATGGAAAATGGGGTTTCTACAAGTCATCAAAATACACCAGCATT
GATATGACCGTTAAATGTGTGACAAGCTCAATGACAGACTGTGGATCGAA
TTCAGTTGTTTTTACATCGGAAATTACAATGAATGGTACGACTGTTGTCA
ATAATCCAACACTCAACAATTTTAATCCAATTCTGAATCGTTTCCAAAAC
AACAGACGTGTTTATAAACATGATAACTTCAAAGTGACTGGTTTGTATTT
ATTCTACCATTCGGGATATTGGATGTTTGGACCTGATCCAGAAAAATCCA
GTGCATTTTTCATTGCCCAAAGCAATGCTGTTAAGCCAGAGTCACTGCAA
AATGGAAAAAAACAGTAGGAGGCAAATGGGTCGAGTTTGATGCCCAAGTT
CAATGTCGTGGACGAAAGAACTATAAACTAGATGATTGTTCAAGACAATG
CAAAGGTGTTTGTCTTGAAAACAGTTTAAAGGAAACTGTATGTACATGCA
AATATGGATACAGAGGTTGGGATTGCTCTTTCAAAGAAGATATAAATATT
TGTGGACCTATTCCAGGTAACGCTCACGAAACTATCAATCGCGAGGAAGG
AGCTGTAACTACAGAGTATTGCTGGGACAACTCGATTCGACCGCTTCTAT
GCTACAGATACAATAACAAGCCACGATCATGGTATGGATACATATGTCCT
CCACAACCGACAACCACGACAACTACAACCACAAGAAGGCCGTACACCTG
GGTGCCACCACACACCTGGGTGCCACCACACAACGGGGGAGGTGAACGCA
AAGAGAAGATCAATCTTGATGATGAACATGGTTTGAGCATTGCAATTCGA
ATTCTTGTGCTTATGATACCAATTTTTCTGCCAATATTCCACTATTATTG
CTACAAGCGTTATCGGAAGTCTAAAGAAAAGGATTTGCCAAGTGTCTTCA
GTATCTACTCTTTGTATTTTTATTGCGGTAAGTTTTTATCAAGATTAAAA
AACGATTTTAGACTAAATTAAATTAATGAATTGACGTTTTTCGTCTTAAG
ATTTATTTACAAACAACTCAATCTTTTAGCCAGGTCTGGTAGAATTAACC
TGCGCCAGACCGTCCATGAAGAAAGTTTTGATTTTACTCTTTAAATTTCT
ATACTTCTAAATTTTGACATAAATATTGAAGTAAAAGAAGGTCCAATCAC
TACCTCCATCCACCCCTGTTAACCTCGAAAGAATCTTCGTACGATAAATT
TANCCCCTGTTAACCTCGAAAGAATCTTCGTGCGATAAACTCATCTAAAT
CACTTCAACCTATTCGTTGAGTATGATAAGCTTTTTACATTTTCATGACA
GGTGTCTTCTTCTGGCTTTTCATCATGCTACTGAACTGGATTATTGATTT
GAAAGATTATGGAAAAATTACAATGGGATATGTTTTGACGGTAGCTTATG
CATTAGCCGCGATAGGATACCTCTTTGTACTTTTCGAGTCGTGTTATTCA
AGCGTTATGGGTTACTTGAAAATGAGCTTCGACAAACCAAACGCTGAACA
ATATGTTCGTTCATTGTTGGTGGAAAAACCATCTGTTGTAACTACCGCCG
TGTGTTACCACTACGAGACGAGATACAGAACAGTATCCTATACAGATGCC
AATGGAAATACTCAAACCAGAACAGAAACCTACCAAGAAAGAGTTAACAC
ATGGACAGGTGCACATGTCTTCGAATTTGATTACTGGCGAGATAATTCAG
ATACGACAAAGATCCCAAACCCTCAAATTGGTGAGATTTTACGCGTCAAA
TTGTCCAAAGAAATATCTTTCGCCAACGATGAGACTGCAAGGGAATTCAC
AGAGCAGACAACAAAGTTCGTTGACGATAACCGATACAGAGATACGTTTA
TTGATTACGGAACCGACTTTCAAGTGGATGGGTTTGAAGAACACATGATA
GCTTATGATCAAAACCAAGGAGTACCGTGGTGGATGAATAAGTACTGTTT
CGTGGTCAGTACTTTGTTCTGTTTATCATGGCCGTTTCGGTGTTTGTTGA
GACGTAAAACTAAGAAATATGCGTACCAAGTTCTGAAGGAGATCTCTATC
CTGCCACTTGAAGCTGTTACCAATCAGCCATGCTCCCAGTCCGTCCCACC
GCTACAACAACAACCTCCACCACAATTTAACTCCCCTTCACAACAACAAC
AACCACCAACTGGATTTAATCAGCCACCCCAGTACTATCCATCTCAGCCC
GTAACGAATAATGCCAACTATGATGCGACAGATTTTGGTGGGCGACATCA
CCCTCAAGGAATGGCACCCAACCAACCGCCCTATCCACCAACTGGTTGGG
CAGGTGAAACACCTCCATCGTATGGAGATGCGATACAAATGAGTGAAGTG
ACATTCAACCCACAGACTGGTTTGCCAACAGCACCATCATCGGGTTATGG
AAATCATGCCTATGTTCAATAATGATGACAGTAGAAGGATCTTATAGAAC
AATTAATATTTGTATCTTCTTAATAAACTTAAGTATGTTTAAAATGTATA
ATTACGTCAATTTACACAATGCGCATAATTAAAATTTTCTTATTTCTCAT
TTCAAAATTATTATTTACATCATTTTATTGTTAGGTGATAAAAGAACGCA
ACTTTTAAAATGTCTGGCCCCTGGTTGCATATGCGTATATTAAGCATAAA
TTTGAGCTTGATTCTAAATTACTCTTAAGCATAACTGAGCTTGGCTGTCT
TCCAAAAATCATATGCTTATAAAAAACATGTAGTTACCGTATCTATTGAA
TGATCTTATAGAACAATTAAATTTATATTTTCTTAATAAAATAAAATATA
CCAAATGACACACAATTCACACAAATATATTAAATTGTTATAGAACAATT
AAATTTATATTTTCTTAATAAAATAAAATATACCAAATGACACACAATTC
ACAGAAATATATTAAATTTCATATTTTGTAACATTATTTCATAATTGACA
TATTCTTTATATAATCTGTAAAACATAAAAAATGAAGCGACTGCTTAGGT
AGAAATTTTCGTCATCTTTCGTGACTTCATCAGCATATAGCTCAACAAAA
AGGATATCATCTTTATATAATCAATATAATCGATTTCATTAAATGCGATT
TCCAGAGGAATCGAACTCTTTTTGTAAAAACTCTACAATATTACAATTAA
TATAATATGTTGTAAAAAAATTGCAAGAAATTCTTTATATATCTTTATAT
ATATT Coding sequence (CDS) from alignment at scaffold_425:80215..84269- >TCONS_00064869 ID=TCONS_00064869|Name=TCONS_00064869|organism=Clytia hemisphaerica|type=CDS|length=2472bp|location=Sequence derived from alignment at scaffold_425:80215..84269- (Clytia hemisphaerica) GTGTCTTCTTCTGGCTTTTCATCATGCTACTGAACTGGATTATTGATTTG AAAGATTATGGAAAAATTACAATGGGATATGTTTTGACGGTAGCTTATGC ATTAGCCGCGATAGGATACCTCTTTGTACTTTTCGAGTCGTGTTATTCAA GCGTTATGGGTTACTTGAAAATGAGCTTCGACAAACCAAACGCTGAACAA TATGTTCGTTCATTGTTGGTGGAAAAACCATCTGTTGTAACTACCGCCGT GTGTTACCACTACGAGACGAGATACAGAACAGTATCCTATACAGATGCCA ATGGAAATACTCAAACCAGAACAGAAACCTACCAAGAAAGAGTTAACACA TGGACAGGTGCACATGTCTTCGAATTTGATTACTGGCGAGATAATTCAGA TACGACAAAGATCCCAAACCCTCAAATTGGTGAGATTTTACGCGTCAAAT TGTCCAAAGAAATATCTTTCGCCAACGATGAGACTGCAAGGGAATTCACA GAGCAGACAACAAAGTTCGTTGACGATAACCGATACAGAGATACGTTTAT TGATTACGGAACCGACTTTCAAGTGGATGGGTTTGAAGAACACATGATAG CTTATGATCAAAACCAAGGAGTACCGTGGTGGATGAATAAGTACTGTTTC GTGGTCAGTACTTTGTTCTGTTTATCATGGCCGTTTCGGTGTTTGTTGAG ACGTAAAACTAAGAAATATGCGTACCAAGTTCTGAAGGAGATCTCTATCC TGCCACTTGAAGCTGTTACCAATCAGCCATGCTCCCAGTCCGTCCCACCG CTACAACAACAACCTCCACCACAATTTAACTCCCCTTCACAACAACAACA ACCACCAACTGGATTTAATCAGCCACCCCAGTACTATCCATCTCAGCCCG TAACGAATAATGCCAACTATGATGCGACAGATTTTGGTGGGCGACATCAC CCTCAAGGAATGGCACCCAACCAACCGCCCTATCCACCAACTGGTTGGGC AGGTGAAACACCTCCATCGTATGGAGATGCGATACAAATGAGTGAAGTGA CATTCAACCCACAGACTGGTTTGCCAACAGCACCATCATCGGGTTATGGA AATCATGCCTATGTTCAATAAATGATACCAATTTTTCTGCCAATATTCCA CTATTATTGCTACAAGCGTTATCGGAAGTCTAAAGAAAAGGATTTGCCAA GTGTCTTCAGTATCTACTCTTTGTATTTTTATTGCGGTGTCTTCTTCTGG CTTTTCATCATGCTACTGAACTGGATTATTGATTTGAAAGATTATGGAAA AATTACAATGGGATATGTTTTGACGGTAGCTTATGCATTAGCCGCGATAG GATACCTCTTTGTACTTTTCGAGTCGTGTTATTCAAGCGTTATGGGTTAC TTGAAAATGAGCTTCGACAAACCAAACGCTGAACAATATGTTCGTTCATT GTTGGTGGAAAAACCATCTGTTGTAACTACCGCCGTGTGTTACCACTACG AGACGAGATACAGAACAGTATCCTATACAGATGCCAATGGAAATACTCAA ACCAGAACAGAAACCTACCAAGAAAGAGTTAACACATGGACAGGTGCACA TGTCTTCGAATTTGATTACTGGCGAGATAATTCAGATACGACAAAGATCC CAAACCCTCAAATTGGTGAGATTTTACGCGTCAAATTGTCCAAAGAAATA TCTTTCGCCAACGATGAGACTGCAAGGGAATTCACAGAGCAGACAACAAA GTTCGTTGACGATAACCGATACAGAGATACGTTTATTGATTACGGAACCG ACTTTCAAGTGGATGGGTTTGAAGAACACATGATAGCTTATGATCAAAAC CAAGGAGTACCGTGGTGGATGAATAAGTACTGTTTCGTGGTCAGTACTTT GTTCTGTTTATCATGGCCGTTTCGGTGTTTGTTGAGACGTAAAACTAAGA AATATGCGTACCAAGTTCTGAAGGAGATCTCTATCCTGCCACTTGAAGCT GTTACCAATCAGCCATGCTCCCAGTCCGTCCCACCGCTACAACAACAACC TCCACCACAATTTAACTCCCCTTCACAACAACAACAACCACCAACTGGAT TTAATCAGCCACCCCAGTACTATCCATCTCAGCCCGTAACGAATAATGCC AACTATGATGCGACAGATTTTGGTGGGCGACATCACCCTCAAGGAATGGC ACCCAACCAACCGCCCTATCCACCAACTGGTTGGGCAGGTGAAACACCTC CATCGTATGGAGATGCGATACAAATGAGTGAAGTGACATTCAACCCACAG ACTGGTTTGCCAACAGCACCATCATCGGGTTATGGAAATCATGCCTATGT TCAATAAATGATACCAATTTTTCTGCCAATATTCCACTATTATTGCTACA AGCGTTATCGGAAGTCTAAAGAAAAGGATTTGCCAAGTGTCTTCAGTATC TACTCTTTGTATTTTTATTGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00064869-exon-scaffold_425-1575043694:82493..84269 | TCONS_00064869-exon-scaffold_425-1575043694:82493..84269 | Clytia hemisphaerica | exon |
TCONS_00064869-exon-scaffold_425-1575043694:80215..82118 | TCONS_00064869-exon-scaffold_425-1575043694:80215..82118 | Clytia hemisphaerica | exon |
TCONS_00064869-exon-scaffold_425-1510915933:82493..84269 | TCONS_00064869-exon-scaffold_425-1510915933:82493..84269 | Clytia hemisphaerica | exon |
TCONS_00064869-exon-scaffold_425-1510915933:80215..82118 | TCONS_00064869-exon-scaffold_425-1510915933:80215..82118 | Clytia hemisphaerica | exon |
TCONS_00064869-exon-scaffold_425-1491911889:82493..84269 | TCONS_00064869-exon-scaffold_425-1491911889:82493..84269 | Clytia hemisphaerica | exon |
TCONS_00064869-exon-scaffold_425-1491911889:80215..82118 | TCONS_00064869-exon-scaffold_425-1491911889:80215..82118 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_425 | supercontig | scaffold_425:80215..84269 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR026767 | Tmem151 |
Blast
The following BLAST results are available for this feature:
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