TCONS_00064852 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064852
Unique NameTCONS_00064852
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length931

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064852 ID=TCONS_00064852|Name=TCONS_00064852|organism=Clytia hemisphaerica|type=transcript|length=931bp
GAAAGAGTGTGAGCTGATAGCTGATGCTGATGcAAAAAATAACATTATTA
AATCAGATTTATTAACAAAAGGGACTTAAACTTACAAATAAAATGGCATC
CAATAAATTTGAAGCACTGGCACGTGAAGATAGTAACGATAGTAGCAGCA
AATCTGATGAAGGGGAAGAAAATGGGGAGATCGGGTCAGATGATTCTGGC
TCAAAAGAAGACCACAATAAATTCGTTTTCCCAGACGAGCCGTTCGTAGA
GAAAGGGGAGCACAAATTGCAATACTGTTATTGTTTATGGTTCTCACGCA
AAAATCCTGGCAAACAACAACTTACTCAACAGAAATATGAAGACAGCATC
AAGCTGATCGGTGCTTTCTCTTCCGTGGAACAATTTTGGGCATATTACTC
GTTCATGGTCCGACCAGGAGAATTGACAGGACACAGTGATATTCATTTAT
TTAAACATGGCATAAGACCAATGTGGGAGGACAAAGCAAACAAGAACGGT
GGCAAGTGGATTGTGCGATTGAAAAAAGGACTTGCTTCTAGATGTTGGGA
AAATCTTATATTAGCGATGTTGGGCGAACAATTTATGGTCGGTCCAGAAG
TTTGTGGAGCTGTTGTATCTTTACGCTACCAGGAAGATATTATTTCGATA
TGGAATCGTAATGCAAGTGATCAAGCCACTACTACTAGAATAAGGGATAC
ATTACGGAGAGTATTGAACCTTCCTCAAAATACCATCATGGAGTACAAAG
CCCACATGGCTAGCTTGACgGACCACTCGAGCTATCGAAACACGAATGTT
TTCATTAGGTGATCGAACTTGTATTTTTTATCTTGtcagaaaaatatata
cattaCTTGGTTATTTCAAGTCCAgcaattcaatattattttatttttcc
attgtACTTATAaccatatctaggctcagat
Run BLAST on NCBI

protein sequence of TCONS_00064852-protein

>TCONS_00064852-protein ID=TCONS_00064852-protein|Name=TCONS_00064852-protein|organism=Clytia hemisphaerica|type=polypeptide|length=239bp
MASNKFEALAREDSNDSSSKSDEGEENGEIGSDDSGSKEDHNKFVFPDEP
FVEKGEHKLQYCYCLWFSRKNPGKQQLTQQKYEDSIKLIGAFSSVEQFWA
YYSFMVRPGELTGHSDIHLFKHGIRPMWEDKANKNGGKWIVRLKKGLASR
CWENLILAMLGEQFMVGPEVCGAVVSLRYQEDIISIWNRNASDQATTTRI
RDTLRRVLNLPQNTIMEYKAHMASLTDHSSYRNTNVFIR
Run BLAST on NCBI

transcript from alignment at scaffold_425:305224..318991+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064852 ID=TCONS_00064852|Name=TCONS_00064852|organism=Clytia hemisphaerica|type=transcript|length=13768bp|location=Sequence derived from alignment at scaffold_425:305224..318991+ (Clytia hemisphaerica)
GAAAGAGTGTGAGCTGATAGCTGATGCTGATGGTGAGTATAAATTTTCCA
AACTTTTTCTGCAATGTTTTGTGAGAAAGTAAAGAATAGGTTTTCATTCA
AATATTACCAAATCACCATAGTTTGATGCCAAAAAACACAAGATATATAC
TAGGTCACAGTTTGCTTCACTTCAGAGCAAACTGCTGTTTTACAGagcaa
tacaccgtttaggagtctcgccatttcacggtactccattgcagaggccc
ggtaaaaatggtaggtaaaaatgcgcactttagtactgtgaaaggttaga
ggaatgtaaacattgtgaatttttgtctctcctttaaagagaatgataat
gattagatatttgaacatgatatcaatgataattttataagtctctcctg
aaaatttcacaaaaattcatcaagaggaaaagaagttatgattaaaagga
gttctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttacctaccgttttt
ttacggaggagagtgaattttccgtgatcgctaaaatcaaaacaatggaa
aattggattgacgcgtgcgcagtcgacactcctaaatgGTGTATTAACAC
TTTCTTCATCGGGAGTCAACAAAACAACATCTATCACAaatctagcctgg
gaatccaagctcataattttagaaaaaacaaaaaatacctcacctcacaa
agttctaaaattatagagcttggtgcaggtagattagtctgaNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGTCTGTGtatgaa
cccttgttgacagactttctgaactttggaaacccaggcaaacgcacata
atcaacttaccataaaaactctttcacaagctctaaatgctaaagacttt
caaaactactaaaaactacatcaaaacatcagccacatgtatttagactt
ccagccaacagccattttgttttgaaatgagtcTATGTTTTCATTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccctgcagg
cgagttacctgcaccaagcgttaaaccagcagcaaaaatatcataaacta
gactgtgaaaaaagtttaacgcttggattcccaggctatcaCAAATCATG
TATGATacttcataaaaaatgaaaaaaagcataTGTAAAATGCAATgtca
aaaagaattgaagaggACCGAGAGAAGTCCTAATTCAAAATTACTCCAAG
AAGTGCATCTAAAAACAAagacagttaggaacatttggcgagttcctgta
cgcgaccgcgatctaaaaaatcataacaacactcattaaaaaatgacgtt
tgtgtcttttcgcacttttttttagcctagacgatgtagcaaacatagta
aatataagcacactgtgcttttaattggctgaaatttttttttgcgtcgg
aaaagctttttcaaactttcagcaatgattgaccaaactgttacaatgaa
aattatccagcgcattttttatcttcttatcttcttaatcttcaatgaag
cactcaacgTTTACTGcatttaagcacataagatattcttataattattg
atattcactaaaACACAGTTCGTTGTGtgctgcggtggagtgtatgacgt
aacttGCGCGGTAACTAGCTCGCcttttgttggaagatcataaTGGGCGT
TATAgcgttaccaccctcaaagctagcgggcgcccctgtctttccgcaac
tctttccaccatcttagatggccataacaatagatccaaaagggcgccat
aatcttggaagataatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgatggaaaatagtaa
gaaacttaagtttacaagtggcatttagtttttgctggcttatagaatgg
caggatcctggatggtttccctaactgaaagACTACCTCTAAAATCAAAA
CGCGCGCAtctccagacggtgtcaatcgaacaacttcgaacaaaaatcgc
aatcgaaccaatcgaacgtaatcgaacgcgatcaaataattgcgattcga
ttgtcgaacgtaatcgaatctcaatcgaacggcctattcctgggtaatat
tcaattgtgttcgattgcgttcgagtaatgttcgattgatagttgactat
gttcgattggttcgattgattgtcaattacattggattaatgttcgatta
cgattatgttcgatgagtttgattgcgattaaatcaaattggatcactct
gttagagcttttttttagcgtgggcggacGAGTGCTTAAGTACCGgacca
aagcaaataaaatctaatacacaattgaatcaatcaaacgtaatcgaata
caatcgaacgtaatcgaatacaatcgaacgtaatcaaatacaatcaAACG
TAATGTAAAataaatcctgggtaatattcgattgcgattcgattgcgttc
gacaatcaaattgcaattattcgattgcgttcaattgcgttcgattgatt
cggcgttcgattcgttcgattgacaccgtctgggcaTCTAGCTAACACGC
TGAACTTTCTAAGTCACCGTACCATCCACCCATCCCTCTCTGGGCCACCG
TACACATCTCTTAGATATTTGCGTGGTTATCTCCCTAGTATTCAGccacc
aaaattgaaaattaagatGGTAACTCAAGCTgcacactttcactttcgat
ttcaacttTTCAACCTTCCAGACTCCGTAAACAAAAACACGACGGTAAAA
AACCGCCTTCAGGCGGTCGATAatatataccgtgaagtcgggtatgGGGC
CACTTCTGCACTCACATCACATATCGATCTTTCTTTATTGATGTTCCACA
CACTGCCAGAGAGAAGTTGCTTCCTCCTTCTGCTTGGTACATTTTGCTTG
TTTTCCTCCGAGTAGTGGTATTCTTTTACACAGATTGGTTCCCAGACCCG
CATAAGTTATGACACAGTAAAATAAAGCCCCAAACTTTTTTAACATAtat
ccagacaatctcaatcgaacggaatcgacaatcgaaccagtcgaaccaaa
ttgaacgcaatcgaccgattgaaattcgattgtcgaacgcaatcaaatct
caatcgaatattaccgcagttttcagattcgattgatattcgattgcgtt
cgatcgtcgattcattgacccccggattgttcatcgcataatttctacgg
aaaatcgaaagtaatttcattcggcttgtgatgtttgagagcttggatgt
tgggaagctgcaagaataaagccagacgatctcaaacgaacggaatcgac
gatcgaaccagtcaaacaacaatcgaaccaatcgaatattacccagaatt
ttgacgtttgattgagattcgattgcgttcgacaatcaaatttcaatcgg
ttgattgcgttcaatttggttcgattgcttcgatcgtcgattccgtttga
ttgagattgtctggataTATGAGCATCTCCAGCATTTTACTATAACTGGT
TTATTCTCTCGATGCCGTGatgaaaaagaggaaaatttgatGCAAAGGTG
TTTTGTCCGCTAGTTTGAAAcgcaggttcaggtttcaggttacaggttca
ggttacaggttaaaaCAGAATAATTGCCAGACCAGATATCATTTCGACTT
GTGAAGTTTGCAGaccagataaaaaaaattcccggTGTTTGAAAGTTCCG
TTTTTTGTCCCAATTATGCTGTatttagcctccttttcaaaaattttcca
cccaggacatttttattcaacccccccccccccccccgctccACCCTCTC
ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCAGCttttaggtac
ccgagagtaactcttcatacaaaaattacaaaacgcatgtttggactttg
taccctatgctgcacgcaagcacttaaaCCAAAGTCCcacaaaggcggga
caaaaatcagttttttaaagtttgcaaAAATCGCCACataaaagatcttt
caaatttagtatgtgaatagagcagtaaaaaatacaactgttctattttt
cctttttttgcaaaagatcttggaatgaaaataaagggatatataccgat
aattgaatactatccattgatgatctgcggcactatcgtaaagctagaat
tcatagtgcggaaaggggtctgatccccccttcttaaatgatcccaacct
ttaaaaatgcctatctcccaagggttttgggctaaattttttatggtaaa
aagggacgggaaacagtaaagaaaaattaagtctgtCAAATagaatacca
ctttttagtgaaaataaagaacttcctttcatgcagaccaaattttATAA
CAGTGCTTggaaataatctacaatatatgtaagccccccttcttaaacga
cccccccctccttgctatccccccctttttaatgaaaatttctgatccct
ccccttcttcacttttttggaaggtgtcatccccccccttaagaaagggg
ggtcCGAAATATGCAAACAATCCAATATCTGAATGAAGATGATTTTATCC
TTCATGTTTCTTGAAACNtcttcacttttttggaaggtgtcatccccccc
ccttaagaaagggggggttCGAACTATGGATTGCTTcgcatactcttcgc
ttgagaaaagattgacagattgaagtttttcactcGCGCGGGAGCTTGCA
GGCGTTCTGCGAGCGTTTTgcaagcgttctcggctcaatccttaGACCgc
gttaaaaatggtagactgtgctgtgatagatcatttcgatggaagttgtt
ggaatgtttacaaggctcttggcAGAAAATCGTttattttattgtcaatg
ataaCAGTgcagttattaattttgttagatctgacaaattgatgtttgta
agtgcactttatagttttgattcccattgaagaatcgtattctggttttc
atgtcattagatgctgttttagagctttagagctagcctgcctGGATTTT
TCCGGATGTGCGTCCGGGCAGCATTTTTTATTGAAGCCTTTTTTGCGATC
TCGGTCCTCTAATTCAAGTGAAAAGTCATCTAAAATAACTTAAATCATTT
TAtttactttctttcttttttcagtgTTGACTTTTTTACTTTGGTGAGAA
AATGAGTTTGAGCTAAAAGGTCTGTCAAGGAAGGATGATGGCTGTTAGTG
TGCTAGAAAGATTTAACAACCTTCCACCTCACAGATGTTACGCGAGGTAA
TCGTCACAAGCCAAAATCCATGTTCaacagattttgaaaacgaaagtgta
aaGAATAAACATTGCCGTAAACGCGTTTAAAACGCGGGTAAAAAGCCCTG
GGCCGAGTCCCGCGTTTGCTCATTCAGCCAATCAGATCATACAATCTAGC
CGGTTCCCAACTCCCGCTATAAAATCACATTGTATATATCGAAATAAAAC
CGGTTTAAATATTTACTAAAAGCTTATTTCACTGAAAGAAAATAGCTTTA
ATGaaacaaattttggttaaatatCTTTCTTATTATATATAAAACCTGAA
TCTAAATGGTTTTGAGAAGTAAAAGAGTGTACGAATAGACAAAGATCGTT
TATGACCCCCGTCTCAGATGAGTTCTTCAGGCTTTATCTAAAGATAGAGA
ACTAAAACAAGCTTGACCcactaaactatttattcagcACCAGACTCTCT
GACATTCTGAGAAATTATTTGCCCGGGAAGAGCAGCAGATTTCAGCGGAA
TGGtgctttttgctctaaaagtgtATGGTGGAAATGGTGcttgttttcaa
acttaaacatcaattcatttgaaatattttgtttatttggattattgaaa
ggttaaagatttgttttatttttattttttgatgatagCTTCACTCAATC
ACTTACAACGAGCTCTCGCATGATACCGCCATTATGGagttttatttttg
tgtttgcTAAATGCGATTTTGTGAGACTTTGCATTACCAACTTTTGCTTA
TGGCAAACACCTGTGACCTCCACACACGCATTATAAATGTTAGACAACAA
aattaccgtgagtggtcctaaatccgacagccctgcctacaTCCGAcatg
gtctttcaaagatacaaactaaaataaaaaaatccttttGCTGTGatgca
acgaagataccaaagtgtcaactaaactctGGGAGAATTTGATACAGTAA
ACCAGTTGAACCAAATAATTAACAATAATTGATTCTTATacgaaacataa
ttttttttgcaatatgtCAAACATCATAAATgacaataaaaggtaattac
atTCAgacttttacaactcacactttttaattacattattgacattttga
cattatagccatcttgttggttgttagatgttttgaatttgttttgagaa
ttcttgcaatagtttttcgttcaacttggagaaggagtgtttgtaaacat
agaatttttattcataacctttatttggggggtcggaattaggcagggct
gtcggatttaggaccactcacggtaccttATCGATCTTTATTGATGCCGG
CCCCTAACGACCTTTCTTACGCCCACGACGAAGGAAACAACGCCAATAGG
AGATAACGGCGTATTGTGATAAAGTTGTTAAGTGAGTTCTAGCTGCATAA
CTTTGCTGTGTGTTTTGCGACGGATTCCAAGAATCATTCCAAGAGGAAAT
CACGCGCTGGATAAACACTCGCTTGTGTGTAATGTCAGGACCGAAATATC
TTCGAAAAAATCTGGCTTTATTCTATTAAATGAagctcaaaaacattaaa
aaatttaaaaaattaacaatAGATACAATTAATTTACAACTTTAATCAAA
ATCATAACTATAATTGTCTTAATACAAAGTTAGCATAAAGTTCTTTAATT
TTATTCAATGTTGAGCGCCCGGTTTCCACCCGGAGCAGTGTGGGCGCGTA
GGCAGAAAAGGGGCGTTTTCAACCTTTAAATTTTTACCGCTCGGGCGGAG
TCTGGGTGGTATCCAGGCGTTTTTGAcaatctatttattttttccgccTG
GTCGCGCCTGAAAAAATCCGGGCGTCGCCGGGAGTCCTCCTACCCTATAT
TGGTTGGAATGGCGCTAAGCGTGGgaaaaatcgatatgtgagtggcccct
aacttgcatcagtggagggaaacttgcatagccatcaaatgactgaccaa
acaaagcagcaaaatttcaaaacaaatgaactacccagctccgctcgcag
ctcttctctaccatttttgttttgatttaactttgtattttaatgaccag
acaggtcattcatttgagggctatgcatgttacgGTATCAgatagggtca
gggttggagctcgaaaccaTATCTTGttagattgggtaacttgcaagGAC
CCTCCTGGTGCTCCGGGAACTTCAGGAGTTTTCCAgagcagctaaaaaaa
cactatttttctctccgGAAAGTTCCCAAGCTTTTCCGGTGCTTTcggag
caagtgatttttaacgcgttctaaaaaaatgtttcatgGCAGTTAGCAGT
ATGGCATTTTACCTGGATTGGGGGACGTCACCTGATCGAACTACGTCGCT
TGTTCTGGGTACACGTGTCGCTCAACGGTCGGAGCAACGGTGTAGTCCAA
CCGAGCCACGGTTTTCTATCACTATTACTCTTTCCTGTGTCTGCCCCCTG
TGCAAACTTTTGGGTCGCTGAAATCTGCATAAAGGTAATCTAAAAAATTT
GCCGTTGAATGAGCGTTCAAACTAAAATTTTCACTGTGCGGTTCACGAGT
TATAAAATTACCTTGATACAATAATCTTGAAATGTGCTTTACATTTGAAC
TAGGTAGGTATTGAGTGGAAAATCagctttttattgaatttacaGCTTAG
ACCAGCCCATTATCTAAGTTGTTTTTCACTTGCCAATTTTGACCTCCCAC
CCAGCAGGGGTCCCTACAACTTAGTACAATCACCTGTACAATGCTATTTT
TGACATACCTGAATTCTGGTCTGTTTGTTAAAAGTTGTCAAGGTAGCATT
ATCTGCAATATTATAAAACTTGTCATTTTAATTGTTGATTTGACGGATCA
AAGCCACCCCAGCGATCCTTGGTCAATATTTTTTGTGTTGAGAATTTTGC
TTCAGAACAAGGTTTTCCCCtaatacgaaaaaaaaattcaaatttttgct
aaACTTTGTAATTAGGGACTCACCAGTGAAATTAGGAATTTAACTTGTTT
CAGATATAgtaaaaacttggaaaaaattcATTATATAAAgaattataatt
tttaattttctttcagcAAAAAATAACATTATTAAATCAGATTTATTAAC
AAAAGGGACTTAAACTTACAAATAAAATGGCATCCAATAAATTTGAAGCG
TGAGTAATTGATTCATTTGAAGAATCCAGGCATTATATATTACATAATTA
GAAAAACCGTATGATTTCTGATGATTGACTATTTTCGAAttcaagaaaat
ttgaatttatgaAGGATTTTTTTTAACAGTAAAATAGGAATCCAGAATAT
TTTGAGAttaatttgattggcttcttttttctttcattgataACAAATGT
GTAAttcatttctgattttttttaccAGACTGGCACGTGAAGATAGTAAC
GATAGTAGCAGCAAATCTGATGAAGGGGAAGAAAATGGGGAGGtatgttt
gttaaaaaaaatcaaagtatGACAATCGCTGGCTTAGAAACTTGCATTCA
GAATCCTGGGGGGTTTTAATGATAAGCAGGGTGTGTACGTGgaggaaaaa
atagaaaatggaagggtcattaaaaaagttttttctttcccGTGTGCAAG
AATTTCTTTGGAATTTATACTTCTATATTTTTTTAGATCGGGTCAGATGA
TTCTGGCTCAAAAGAAGACCACAATAAAGTGAGTTCATGGCTTTATGCGG
TTCATTTGGTTGATATTCTTGATAGTCTTGCATAAACTCTCATAGGAGTA
AAATACACCGATTTTAAGGCCACCCTTTAAATAAAAGTATCTATGAAAGC
CAAACAACAAAGTTTTTGGAATTGGTAGTTGGCAATgtgtaaaaaagaaa
ttagataCTGGATATTCATTACTCCTCACATTGCTCTAACTCTCTCTTTC
TTTTAGTTCGTTTTCCCAGACGAGCCGTTCGTAGAGAAAGGGGAGCACAA
ATTGCAATACTGTTATTGTTTATGGTTCTCACGCAAAAATCCTGGCAAAC
AACAACTTACTCAACAGAAATATGAAGACAGCATCAAGCTGATCGGTGCT
TTCTCTTCCGTAAGCTTAAAATAATTCTTTAAACATAAAGACATGGACTT
GCTGCCTATTAAGCAATATTTCCAGTGTTGTATACCTTTTTGCTTTAGGG
GAAAAATAGCCAGGATTTGTCTTTATTGttaaaattttgccaaaaattgt
GTCACCAACTTGCTCAAGTTAAAAATAACTCGTGGGCTTTCAGTTAGGGA
AAATCCAAGGTTCCCTAAAAATAGTCAATCAATTTAGTCATTTCAAGTTA
AAAGGTATCTAATTGCGGTTAAAGTGCAATAAGACACCAGAAAATCATGA
GGCATGGTTGATGACAAAGCCATGCAGAAGACCTGGAAGTAGTCCATTGT
ATGCtaagtttttattttctagGTGGAACAATTTTGGGCATATTACTCGT
TCATGGTCCGACCAGGAGAATTGACAGGACACAGTGATATTCATTTATTT
AAACATGGCATAAGACCAATGTGGGAGGTATGTATATAGGCAATGAACCA
TCCCATCGAGTAGTCTAGCATACTAGACGTCTAATAATTCAGActcaacg
caaaaaaaaaataaaaattataacgAACAAGTTTTAGTATTTCATCCTGT
TACGGTTTTTGTATTATTACATTACACCAATATAGCGGTATTACACAGAT
TAAAGACGGCTCCATGTTTCTAGGGAGTATTAGACCTTTCGAATCTCAAT
CGTTTTTACCCTGTACACATTTTGGGAGCGAtttatttttttcggaaaat
aaaAATCCCTGTTTAAAGTAACATGTATTTCTAAATGAGTGTATTCTTTA
TAATAATAGGACAAAGCAAACAAGAACGGTGGCANTTTCGGAAAATAAAA
ATCCCTGTTTAAAGTAACATGTATTTCTAAATGAGTGTATTCTTTATAAT
AATAGGACAAAGCAAACAAGAACGGTGGCAAGTGGATTGTGCGATTGAAA
AAAGGACTTGCTTCTAGATGTTGGGAAAATCTTGTGAGTCAcctgtttct
ttttcatttttataaacatAACTAATAAGTAAATCTAGACTCAAAATCAA
CTAACTAAACAATGGTCCTAGGCAGAACATTGCTGAGCGGGTAGACATTT
GCTTATGAAAATAGAtatttattttagaattttatcCCTTATTATATCGA
TCTCGTAAAGGATCTGAAGTAATATTATCACTTATTCtcttattttttca
acgatTGTCATTGTTTAAAACCATTTATAATTTTCTTCCTATAGATATTA
GCGATGTTGGGCGAACAATTTATGGTCGGTCCAGAAGTTTGTGGAGCTGT
TGTATCTTTACGCTACCAGGTTGACGAATAATTCCTTTACTCTGAAAATT
TAATTAAGTTACCATAACTCGATCACGCACTTGAGTGATGCAATGGGCTT
AAAACGCCATGTTAATATTAAGACCGATAAATTGTTGGAGTTTTAGAGGT
TCGAGTCTTGGTGATTTTGTTGTATTAAAATCTTGTATTTTACTATACTC
CTCATTTTACCTCGAACTTTACTTTCACCTGAAATAATATCTCAAAAGAT
TTgcaaataatacaaaaataatgcATATTTTCATAACAATCTTTGATGCA
AAGTAATAATATCTCAATAAATTTgcaaataatacaaaaataatgcATAT
TTTCATAACAATCTTTGATGCAAAGTAATAATATCTCAATAAATTTgcaa
ataatacaaaaataatgcATATTTTTATAACTATCTTTGATGCAAAGTAT
GTCACATTTCATGATTTCCATCCTGTTTTACAGGAAGATATTATTTCGAT
ATGGAATCGTAATGCAAGTGATCAAGCCACTACTACTAGAATAAGGTATC
ATGCTTCATTCTTAAACTTTTTTGATTATATTCCACTcctaaatatcttt
ttaacgagcacaaaactgTCATCCAATTCGCTATCAAAAGTCATAACTTT
TTTATCTCTgcttcaaattattttgagacagacttaagGATCTctaaagt
aagtaagtctgcgaccgcagatACCAAATGACCGAAGtgtcctctttcga
tagctatctacccgaaggtaggggagggcgccactctttctccctggatt
tctccacttactcttgatccttctcttaattgctgagcatcaagcagaga
ggtatcaataccattttgagaatctttggtatgagctggctgggggttga
acccacaaccttacgAATCGTAGCCAGATGCTTTACCACTGCACCACGGT
TCGCTAACTCTATAAGCTTTGCATCGCTTCTCAACAATTTGTTCCTTTCC
ATTTACAGGGATACATTACGGAGAGTATTGAACCTTCCTCAAAATACCAT
CATGGAGTACAAAGCCCACATGGCTAGCTTGACGTAAGATCTTTTCTTTA
ATTTGTTCCTCGCGTACTTCATTTCCGTACATTTTAAACACCCTTGTTAT
CTGTTTACAGGGTGGACATCAGAAATATGCTAAGCCAGTTAAGCAATTAG
TATCAATTCTCCAGAATATCTCTAAAGAGATTTTGTTATTTGTGATATGT
GCCAAATCTTCACCgtagaatgttttttttactaACAAACTCCACTGGTG
ATTGTCTTTAGACACGCTCGTGATTCAGTCTCTAAAATAACCTATTCATC
AATAATCTCCTAAAATAACCTATTCATCAATAATCTCCTAAAATAGAATT
TACATCCTTCTGATTTCTGGCAATTGAAAAAGTCGCTTGGCAAATTGAGT
TAGAAAAAGGTTGCCGCCGTGGATATTTTTAATGCCAGTACTGTACTCTA
TCGATAACtgcattaaaaaaaatcattgcaGTGTcacttgtttttcaaat
ttactGTATATGAACatgattgtatgttttcacaatgggctcttccagaa
aaaatccgttcatgcaTGTGAGGTGGAGGATGAATTCTCCATGGGTTCCA
AAAAAAGTCCTAAAAATTGCATTGTCCATTGGGGGTAAATCtgcgatatc
caggggtaaattTTGGCAATTGAAAAAGTCCTTTGGCAAATTGAgttaga
aaagtttttttatgagattcccaaaagatcaaacttaaaaagtttcttag
gattttatttctaaccgagttgtttttccccaatttacagataactgaaa
aaatcacatttaaatttacttttttatcgatatttttacagaatttagga
tttaaagagttaaagtcaattccaaaaaaaatcccaagacatttttttag
ttcaatctattTAACTTctaacatagtatcgaaattattttttcaaaatt
caaaagctttgggtgactttaacttctttgaagtaggtaaggttaaaatt
cttaagattttaattatatcctgcccagttttttaaattcagctgaaact
tttaccattagaaagagaatattaatggctttcagaaaatatatactttt
gatatataaagatttgttgttctaaagatatgatcaattaaagagaattt
gtcaagaaaggtgaacacataccttaacaATCACGAgatatctttctttc
tttcaggGACCACTCGAGCTATCGAAACACGAATGTTTTCATTAGGTGAT
CGAACTTGTATTTTTTATCTTGtcagaaaaatatatacattaCTTGGTTA
TTTCAAGTCCAgcaattcaatattattttatttttccattgtACTTATAa
ccatatctaggctcagat

Coding sequence (CDS) from alignment at scaffold_425:305224..318991+

>TCONS_00064852 ID=TCONS_00064852|Name=TCONS_00064852|organism=Clytia hemisphaerica|type=CDS|length=7200bp|location=Sequence derived from alignment at scaffold_425:305224..318991+ (Clytia hemisphaerica)
ATGGCATCCAATAAATTTGAAGCACTGGCACGTGAAGATAGTAACGATAG
TAGCAGCAAATCTGATGAAGGGGAAGAAAATGGGGAGATCGGGTCAGATG
ATTCTGGCTCAAAAGAAGACCACAATAAATTCGTTTTCCCAGACGAGCCG
TTCGTAGAGAAAGGGGAGCACAAATTGCAATACTGTTATTGTTTATGGTT
CTCACGCAAAAATCCTGGCAAACAACAACTTACTCAACAGAAATATGAAG
ACAGCATCAAGCTGATCGGTGCTTTCTCTTCCGTGGAACAATTTTGGGCA
TATTACTCGTTCATGGTCCGACCAGGAGAATTGACAGGACACAGTGATAT
TCATTTATTTAAACATGGCATAAGACCAATGTGGGAGGACAAAGCAAACA
AGAACGGTGGCAAGTGGATTGTGCGATTGAAAAAAGGACTTGCTTCTAGA
TGTTGGGAAAATCTTATATTAGCGATGTTGGGCGAACAATTTATGGTCGG
TCCAGAAGTTTGTGGAGCTGTTGTATCTTTACGCTACCAGGAAGATATTA
TTTCGATATGGAATCGTAATGCAAGTGATCAAGCCACTACTACTAGAATA
AGGGATACATTACGGAGAGTATTGAACCTTCCTCAAAATACCATCATGGA
GTACAAAGCCCACATGGCTAGCTTGACgGACCACTCGAGCTATCGAAACA
CGAATGTTTTCATTAGGTGAATGGCATCCAATAAATTTGAAGCACTGGCA
CGTGAAGATAGTAACGATAGTAGCAGCAAATCTGATGAAGGGGAAGAAAA
TGGGGAGATCGGGTCAGATGATTCTGGCTCAAAAGAAGACCACAATAAAT
TCGTTTTCCCAGACGAGCCGTTCGTAGAGAAAGGGGAGCACAAATTGCAA
TACTGTTATTGTTTATGGTTCTCACGCAAAAATCCTGGCAAACAACAACT
TACTCAACAGAAATATGAAGACAGCATCAAGCTGATCGGTGCTTTCTCTT
CCGTGGAACAATTTTGGGCATATTACTCGTTCATGGTCCGACCAGGAGAA
TTGACAGGACACAGTGATATTCATTTATTTAAACATGGCATAAGACCAAT
GTGGGAGGACAAAGCAAACAAGAACGGTGGCAAGTGGATTGTGCGATTGA
AAAAAGGACTTGCTTCTAGATGTTGGGAAAATCTTATATTAGCGATGTTG
GGCGAACAATTTATGGTCGGTCCAGAAGTTTGTGGAGCTGTTGTATCTTT
ACGCTACCAGGAAGATATTATTTCGATATGGAATCGTAATGCAAGTGATC
AAGCCACTACTACTAGAATAAGGGATACATTACGGAGAGTATTGAACCTT
CCTCAAAATACCATCATGGAGTACAAAGCCCACATGGCTAGCTTGACgGA
CCACTCGAGCTATCGAAACACGAATGTTTTCATTAGGTGAATGGCATCCA
ATAAATTTGAAGCACTGGCACGTGAAGATAGTAACGATAGTAGCAGCAAA
TCTGATGAAGGGGAAGAAAATGGGGAGATCGGGTCAGATGATTCTGGCTC
AAAAGAAGACCACAATAAATTCGTTTTCCCAGACGAGCCGTTCGTAGAGA
AAGGGGAGCACAAATTGCAATACTGTTATTGTTTATGGTTCTCACGCAAA
AATCCTGGCAAACAACAACTTACTCAACAGAAATATGAAGACAGCATCAA
GCTGATCGGTGCTTTCTCTTCCGTGGAACAATTTTGGGCATATTACTCGT
TCATGGTCCGACCAGGAGAATTGACAGGACACAGTGATATTCATTTATTT
AAACATGGCATAAGACCAATGTGGGAGGACAAAGCAAACAAGAACGGTGG
CAAGTGGATTGTGCGATTGAAAAAAGGACTTGCTTCTAGATGTTGGGAAA
ATCTTATATTAGCGATGTTGGGCGAACAATTTATGGTCGGTCCAGAAGTT
TGTGGAGCTGTTGTATCTTTACGCTACCAGGAAGATATTATTTCGATATG
GAATCGTAATGCAAGTGATCAAGCCACTACTACTAGAATAAGGGATACAT
TACGGAGAGTATTGAACCTTCCTCAAAATACCATCATGGAGTACAAAGCC
CACATGGCTAGCTTGACgGACCACTCGAGCTATCGAAACACGAATGTTTT
CATTAGGTGAATGGCATCCAATAAATTTGAAGCACTGGCACGTGAAGATA
GTAACGATAGTAGCAGCAAATCTGATGAAGGGGAAGAAAATGGGGAGATC
GGGTCAGATGATTCTGGCTCAAAAGAAGACCACAATAAATTCGTTTTCCC
AGACGAGCCGTTCGTAGAGAAAGGGGAGCACAAATTGCAATACTGTTATT
GTTTATGGTTCTCACGCAAAAATCCTGGCAAACAACAACTTACTCAACAG
AAATATGAAGACAGCATCAAGCTGATCGGTGCTTTCTCTTCCGTGGAACA
ATTTTGGGCATATTACTCGTTCATGGTCCGACCAGGAGAATTGACAGGAC
ACAGTGATATTCATTTATTTAAACATGGCATAAGACCAATGTGGGAGGAC
AAAGCAAACAAGAACGGTGGCAAGTGGATTGTGCGATTGAAAAAAGGACT
TGCTTCTAGATGTTGGGAAAATCTTATATTAGCGATGTTGGGCGAACAAT
TTATGGTCGGTCCAGAAGTTTGTGGAGCTGTTGTATCTTTACGCTACCAG
GAAGATATTATTTCGATATGGAATCGTAATGCAAGTGATCAAGCCACTAC
TACTAGAATAAGGGATACATTACGGAGAGTATTGAACCTTCCTCAAAATA
CCATCATGGAGTACAAAGCCCACATGGCTAGCTTGACgGACCACTCGAGC
TATCGAAACACGAATGTTTTCATTAGGTGAATGGCATCCAATAAATTTGA
AGCACTGGCACGTGAAGATAGTAACGATAGTAGCAGCAAATCTGATGAAG
GGGAAGAAAATGGGGAGATCGGGTCAGATGATTCTGGCTCAAAAGAAGAC
CACAATAAATTCGTTTTCCCAGACGAGCCGTTCGTAGAGAAAGGGGAGCA
CAAATTGCAATACTGTTATTGTTTATGGTTCTCACGCAAAAATCCTGGCA
AACAACAACTTACTCAACAGAAATATGAAGACAGCATCAAGCTGATCGGT
GCTTTCTCTTCCGTGGAACAATTTTGGGCATATTACTCGTTCATGGTCCG
ACCAGGAGAATTGACAGGACACAGTGATATTCATTTATTTAAACATGGCA
TAAGACCAATGTGGGAGGACAAAGCAAACAAGAACGGTGGCAAGTGGATT
GTGCGATTGAAAAAAGGACTTGCTTCTAGATGTTGGGAAAATCTTATATT
AGCGATGTTGGGCGAACAATTTATGGTCGGTCCAGAAGTTTGTGGAGCTG
TTGTATCTTTACGCTACCAGGAAGATATTATTTCGATATGGAATCGTAAT
GCAAGTGATCAAGCCACTACTACTAGAATAAGGGATACATTACGGAGAGT
ATTGAACCTTCCTCAAAATACCATCATGGAGTACAAAGCCCACATGGCTA
GCTTGACgGACCACTCGAGCTATCGAAACACGAATGTTTTCATTAGGTGA
ATGGCATCCAATAAATTTGAAGCACTGGCACGTGAAGATAGTAACGATAG
TAGCAGCAAATCTGATGAAGGGGAAGAAAATGGGGAGATCGGGTCAGATG
ATTCTGGCTCAAAAGAAGACCACAATAAATTCGTTTTCCCAGACGAGCCG
TTCGTAGAGAAAGGGGAGCACAAATTGCAATACTGTTATTGTTTATGGTT
CTCACGCAAAAATCCTGGCAAACAACAACTTACTCAACAGAAATATGAAG
ACAGCATCAAGCTGATCGGTGCTTTCTCTTCCGTGGAACAATTTTGGGCA
TATTACTCGTTCATGGTCCGACCAGGAGAATTGACAGGACACAGTGATAT
TCATTTATTTAAACATGGCATAAGACCAATGTGGGAGGACAAAGCAAACA
AGAACGGTGGCAAGTGGATTGTGCGATTGAAAAAAGGACTTGCTTCTAGA
TGTTGGGAAAATCTTATATTAGCGATGTTGGGCGAACAATTTATGGTCGG
TCCAGAAGTTTGTGGAGCTGTTGTATCTTTACGCTACCAGGAAGATATTA
TTTCGATATGGAATCGTAATGCAAGTGATCAAGCCACTACTACTAGAATA
AGGGATACATTACGGAGAGTATTGAACCTTCCTCAAAATACCATCATGGA
GTACAAAGCCCACATGGCTAGCTTGACgGACCACTCGAGCTATCGAAACA
CGAATGTTTTCATTAGGTGAATGGCATCCAATAAATTTGAAGCACTGGCA
CGTGAAGATAGTAACGATAGTAGCAGCAAATCTGATGAAGGGGAAGAAAA
TGGGGAGATCGGGTCAGATGATTCTGGCTCAAAAGAAGACCACAATAAAT
TCGTTTTCCCAGACGAGCCGTTCGTAGAGAAAGGGGAGCACAAATTGCAA
TACTGTTATTGTTTATGGTTCTCACGCAAAAATCCTGGCAAACAACAACT
TACTCAACAGAAATATGAAGACAGCATCAAGCTGATCGGTGCTTTCTCTT
CCGTGGAACAATTTTGGGCATATTACTCGTTCATGGTCCGACCAGGAGAA
TTGACAGGACACAGTGATATTCATTTATTTAAACATGGCATAAGACCAAT
GTGGGAGGACAAAGCAAACAAGAACGGTGGCAAGTGGATTGTGCGATTGA
AAAAAGGACTTGCTTCTAGATGTTGGGAAAATCTTATATTAGCGATGTTG
GGCGAACAATTTATGGTCGGTCCAGAAGTTTGTGGAGCTGTTGTATCTTT
ACGCTACCAGGAAGATATTATTTCGATATGGAATCGTAATGCAAGTGATC
AAGCCACTACTACTAGAATAAGGGATACATTACGGAGAGTATTGAACCTT
CCTCAAAATACCATCATGGAGTACAAAGCCCACATGGCTAGCTTGACgGA
CCACTCGAGCTATCGAAACACGAATGTTTTCATTAGGTGAATGGCATCCA
ATAAATTTGAAGCACTGGCACGTGAAGATAGTAACGATAGTAGCAGCAAA
TCTGATGAAGGGGAAGAAAATGGGGAGATCGGGTCAGATGATTCTGGCTC
AAAAGAAGACCACAATAAATTCGTTTTCCCAGACGAGCCGTTCGTAGAGA
AAGGGGAGCACAAATTGCAATACTGTTATTGTTTATGGTTCTCACGCAAA
AATCCTGGCAAACAACAACTTACTCAACAGAAATATGAAGACAGCATCAA
GCTGATCGGTGCTTTCTCTTCCGTGGAACAATTTTGGGCATATTACTCGT
TCATGGTCCGACCAGGAGAATTGACAGGACACAGTGATATTCATTTATTT
AAACATGGCATAAGACCAATGTGGGAGGACAAAGCAAACAAGAACGGTGG
CAAGTGGATTGTGCGATTGAAAAAAGGACTTGCTTCTAGATGTTGGGAAA
ATCTTATATTAGCGATGTTGGGCGAACAATTTATGGTCGGTCCAGAAGTT
TGTGGAGCTGTTGTATCTTTACGCTACCAGGAAGATATTATTTCGATATG
GAATCGTAATGCAAGTGATCAAGCCACTACTACTAGAATAAGGGATACAT
TACGGAGAGTATTGAACCTTCCTCAAAATACCATCATGGAGTACAAAGCC
CACATGGCTAGCTTGACgGACCACTCGAGCTATCGAAACACGAATGTTTT
CATTAGGTGAATGGCATCCAATAAATTTGAAGCACTGGCACGTGAAGATA
GTAACGATAGTAGCAGCAAATCTGATGAAGGGGAAGAAAATGGGGAGATC
GGGTCAGATGATTCTGGCTCAAAAGAAGACCACAATAAATTCGTTTTCCC
AGACGAGCCGTTCGTAGAGAAAGGGGAGCACAAATTGCAATACTGTTATT
GTTTATGGTTCTCACGCAAAAATCCTGGCAAACAACAACTTACTCAACAG
AAATATGAAGACAGCATCAAGCTGATCGGTGCTTTCTCTTCCGTGGAACA
ATTTTGGGCATATTACTCGTTCATGGTCCGACCAGGAGAATTGACAGGAC
ACAGTGATATTCATTTATTTAAACATGGCATAAGACCAATGTGGGAGGAC
AAAGCAAACAAGAACGGTGGCAAGTGGATTGTGCGATTGAAAAAAGGACT
TGCTTCTAGATGTTGGGAAAATCTTATATTAGCGATGTTGGGCGAACAAT
TTATGGTCGGTCCAGAAGTTTGTGGAGCTGTTGTATCTTTACGCTACCAG
GAAGATATTATTTCGATATGGAATCGTAATGCAAGTGATCAAGCCACTAC
TACTAGAATAAGGGATACATTACGGAGAGTATTGAACCTTCCTCAAAATA
CCATCATGGAGTACAAAGCCCACATGGCTAGCTTGACgGACCACTCGAGC
TATCGAAACACGAATGTTTTCATTAGGTGAATGGCATCCAATAAATTTGA
AGCACTGGCACGTGAAGATAGTAACGATAGTAGCAGCAAATCTGATGAAG
GGGAAGAAAATGGGGAGATCGGGTCAGATGATTCTGGCTCAAAAGAAGAC
CACAATAAATTCGTTTTCCCAGACGAGCCGTTCGTAGAGAAAGGGGAGCA
CAAATTGCAATACTGTTATTGTTTATGGTTCTCACGCAAAAATCCTGGCA
AACAACAACTTACTCAACAGAAATATGAAGACAGCATCAAGCTGATCGGT
GCTTTCTCTTCCGTGGAACAATTTTGGGCATATTACTCGTTCATGGTCCG
ACCAGGAGAATTGACAGGACACAGTGATATTCATTTATTTAAACATGGCA
TAAGACCAATGTGGGAGGACAAAGCAAACAAGAACGGTGGCAAGTGGATT
GTGCGATTGAAAAAAGGACTTGCTTCTAGATGTTGGGAAAATCTTATATT
AGCGATGTTGGGCGAACAATTTATGGTCGGTCCAGAAGTTTGTGGAGCTG
TTGTATCTTTACGCTACCAGGAAGATATTATTTCGATATGGAATCGTAAT
GCAAGTGATCAAGCCACTACTACTAGAATAAGGGATACATTACGGAGAGT
ATTGAACCTTCCTCAAAATACCATCATGGAGTACAAAGCCCACATGGCTA
GCTTGACgGACCACTCGAGCTATCGAAACACGAATGTTTTCATTAGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040677XLOC_040677Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064852-proteinTCONS_00064852-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064852-exon-scaffold_425-1491911889:305224..305255TCONS_00064852-exon-scaffold_425-1491911889:305224..305255Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:305224..305255TCONS_00064852-exon-scaffold_425-1510915933:305224..305255Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:305224..305255TCONS_00064852-exon-scaffold_425-1575043694:305224..305255Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:314290..314372TCONS_00064852-exon-scaffold_425-1491911889:314290..314372Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:314290..314372TCONS_00064852-exon-scaffold_425-1510915933:314290..314372Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:314290..314372TCONS_00064852-exon-scaffold_425-1575043694:314290..314372Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:314602..314665TCONS_00064852-exon-scaffold_425-1491911889:314602..314665Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:314602..314665TCONS_00064852-exon-scaffold_425-1510915933:314602..314665Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:314602..314665TCONS_00064852-exon-scaffold_425-1575043694:314602..314665Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:314860..314901TCONS_00064852-exon-scaffold_425-1491911889:314860..314901Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:314860..314901TCONS_00064852-exon-scaffold_425-1510915933:314860..314901Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:314860..314901TCONS_00064852-exon-scaffold_425-1575043694:314860..314901Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:315130..315282TCONS_00064852-exon-scaffold_425-1491911889:315130..315282Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:315130..315282TCONS_00064852-exon-scaffold_425-1510915933:315130..315282Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:315130..315282TCONS_00064852-exon-scaffold_425-1575043694:315130..315282Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:315646..315750TCONS_00064852-exon-scaffold_425-1491911889:315646..315750Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:315646..315750TCONS_00064852-exon-scaffold_425-1510915933:315646..315750Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:315646..315750TCONS_00064852-exon-scaffold_425-1575043694:315646..315750Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:316179..316256TCONS_00064852-exon-scaffold_425-1491911889:316179..316256Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:316179..316256TCONS_00064852-exon-scaffold_425-1510915933:316179..316256Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:316179..316256TCONS_00064852-exon-scaffold_425-1575043694:316179..316256Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:316518..316592TCONS_00064852-exon-scaffold_425-1491911889:316518..316592Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:316518..316592TCONS_00064852-exon-scaffold_425-1510915933:316518..316592Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:316518..316592TCONS_00064852-exon-scaffold_425-1575043694:316518..316592Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:317057..317118TCONS_00064852-exon-scaffold_425-1491911889:317057..317118Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:317057..317118TCONS_00064852-exon-scaffold_425-1510915933:317057..317118Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:317057..317118TCONS_00064852-exon-scaffold_425-1575043694:317057..317118Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:317582..317656TCONS_00064852-exon-scaffold_425-1491911889:317582..317656Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:317582..317656TCONS_00064852-exon-scaffold_425-1510915933:317582..317656Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:317582..317656TCONS_00064852-exon-scaffold_425-1575043694:317582..317656Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1491911889:318830..318991TCONS_00064852-exon-scaffold_425-1491911889:318830..318991Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1510915933:318830..318991TCONS_00064852-exon-scaffold_425-1510915933:318830..318991Clytia hemisphaericaexon
TCONS_00064852-exon-scaffold_425-1575043694:318830..318991TCONS_00064852-exon-scaffold_425-1575043694:318830..318991Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:305224..318991 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
109.368	103.872	49.3928	43.2979	86.2301	61.7084	118.226	124.978	124.671	112.231	133.636	156.893	101.92	109.918	101.575	115.672	125.216	124.747	93.1423	90.0936	112.4	105.25	121.107	122.709	93.2701	91.7918	110.228	101.615	92.0702	89.5508
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR023398TIF_eIF4e-like
IPR001040TIF_eIF_4E
IPR019770TIF_eIF_4E_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003743 translation initiation factor activity
Blast
[Close]
BLAST of TCONS_00064852 vs. Swiss-Prot (Human)
Match: IF4E2 (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 4.306e-94
Identity = 129/171 (75.44%), Postives = 145/171 (84.80%), Query Frame = 3 
Query:  255 GEHKLQYCYCLWFSRKNPGKQQLTQQKYEDSIKLIGAFSSVEQFWAYYSFMVRPGELTGHSDIHLFKHGIRPMWEDKANKNGGKWIVRLKKGLASRCWENLILAMLGEQFMVGPEVCGAVVSLRYQEDIISIWNRNASDQATTTRIRDTLRRVLNLPQNTIMEYKAHMASL 767
             EH LQY Y  W+SR+ PG+   + Q YE +IK IG F+SVEQFW +YS MVRPG+LTGHSD HLFK GI+PMWED ANKNGGKWI+RL+KGLASRCWENLILAMLGEQFMVG E+CGAVVS+R+QEDIISIWN+ ASDQATT RIRDTLRRVLNLP NTIMEYK H  S+
Sbjct:   52 AEHPLQYNYTFWYSRRTPGRP-TSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSI 221
The following BLAST results are available for this feature:
BLAST of TCONS_00064852 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF4E24.306e-9475.44Eukaryotic translation initiation factor 4E type 2... [more]
back to top