TCONS_00064841 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064841
Unique NameTCONS_00064841
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2227

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064841 ID=TCONS_00064841|Name=TCONS_00064841|organism=Clytia hemisphaerica|type=transcript|length=2227bp
CATCGGATGCTGTTTTACTGAAGCAATGGAATGCTAATTCACAACAGCAG
ATTAAAGAGGAAGAGTTTGACTTAACTTTCAATGAAGTTAATCCaacaaa
ccaaaatattttggcagAATTAACAGCACAAACTCAAAAACTTGAGAACA
CGCTACCCCTAATTCAACAAGAAATACAGAAAGTGCCAACAGAATCTTCA
GAGCAGAAATATTCTCCCAGAGAAAATATTGACATGGATGGAGATACGCC
ATTGCATATTCTGGTAGTCCGATGTGAAGGGAGAAACAAGCAAACGAGAG
GTTTTGGATTATCTCAGAGAAATAACTATGAAAATGATCAGGCCAGAAAA
GATTTCTTTGATAAAGCACATCTCTACAAACAATACGTCAACCGACAAAA
CAATGATGGAATGACACCACTACACTACGCCGTGGAAATTGGTTGCCCGC
AAATGGTTCACAAGCTGCTTCAACTGGGGAGCTGTTTAAACCGATTCAAC
AACAGATTAGAATCTCCAATACACGTGGCTTTGAGACAAAGGAAAGATTC
TGATTTGTACAATTTCACAACAATGGAACATTTGAAACAGATTGTGGAGC
AACTTTTACGTGCTAACCAAGCAAGATATGGTGACGATCACATGGATTTG
AACAAGAAGGATAAAAATGGTCTGACTTGTGTTCATCTGGCTTGCTTGTA
CGCAAACCACGAAGCAACAAATTTGGTCAATCTATTGAAATGCTATGGTG
CAGATCTTGATGAAAAGGAAGATCGACAAGGATTCACTCCGCTACAGTTC
ATCATCAACAAAGGGAAGGATTGTAATCTTCAAAAGCCTGAAGGAATCAA
ACAAAGAGAGGCTTACTTCAAGACAGCAAAGCATCTGATCACCCAACAGA
AAGTCGATGTGACGTCACTATCCATGGCTGAAGACACTGCGTTGCATTTA
GCCTGTGCAGCCAACGATAAGGGGCTAGTGGAGTTGCTGTTGGGTCGTGA
TGAAATTGAAGTCAACCTGAAGAATGCGTTCAANACCACTACACTACGCC
GTGGAAATTGGTTGCCCGCAAATGGTTCACAAGCTGCTTCAACTGGGGAG
CTGTTTAAACCGATTCAACAACAGATTAGAATCTCCAATACACGTGGCTT
TGAGACAAAGGAAAGATTCTGATTTGTACAATTTCACAACAATGGAACAT
TTGAAACAGATTGTGGAGCAACTTTTACGTGCTAACCAAGCAAGATATGG
TGACGATCACATGGATTTGAACAAGAAGGATAAAAATGGTCTGACTTGTG
TTCATCTGGCTTGCTTGTACGCAAACCACGAAGCAACAAATTTGGTCAAT
CTATTGAAATGCTATGGTGCAGATCTTGATGAAAAGGAAGATCGACAAGG
ATTCACTCCTCTACAGTTCATCATCAACAAAGGGAAGGATTGTAATCTTC
AAAAGCCTGAAGGAATCAAACAAAGAAATGCTTACTTCAAGACAGCAAAG
CATCTGATCACCCAACAGAAAGTCGATGTGACGTCACTATCCATGGCTGA
AGACACTGCATTGCATTTAGCCTGTGCAGCCAACGATAAGGGGCTAGTGG
AGTTGCTGTTGGGTCGTGATGAAATTGAAGTCAACCTGAAGAATGCGTTC
aagaaaaatgagaaagatTTGACGGATGACGACcagATCAAAGAGATGCT
TGAAGTGAAATatcgtcaaaaaagaagaaaacgaaagaaTAACGAACAAG
GGGTGACAAGCGGCAAGGCGAAAAAGGCGAAATAAATTCAATATGTTTTC
ATTTCGGCGAAGacctgtaaaaatgaaaaataaccatatatacattttta
ttcagttttatttttttcagttttaaaaatttttattgtaattaaGCATA
AGTAACCATGAAAAATAACATTtggaaaatccaaaaaaatcatttttgta
aatagaGGCGAAATTTTGatattaaaaaaagttcaaaaggattcgtattt
ttttttacttttgagcttttaaaatttaaaatgtaaatataTTATGTAGA
TTATTTAAAGATTGATCGATACTTTAAATTGCTTGCCCCCCGTATCTCGT
ACCAGTTGtcacatacacgcttttttataagaatagtgtactttggatga
gggccaagtattcttaagaaattgacaaaatcgagggtgaaatattctta
acatatacttgattttttagacttgac
Run BLAST on NCBI

protein sequence of TCONS_00064841-protein

>TCONS_00064841-protein ID=TCONS_00064841-protein|Name=TCONS_00064841-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
SDAVLLKQWNANSQQQIKEEEFDLTFNEVNPTNQNILAELTAQTQKLENT
LPLIQQEIQKVPTESSEQKYSPRENIDMDGDTPLHILVVRCEGRNKQTRG
FGLSQRNNYENDQARKDFFDKAHLYKQYVNRQNNDGMTPLHYAVEIGCPQ
MVHKLLQLGSCLNRFNNRLESPIHVALRQRKDSDLYNFTTMEHLKQIVEQ
LLRANQARYGDDHMDLNKKDKNGLTCVHLACLYANHEATNLVNLLKCYGA
DLDEKEDRQGFTPLQFIINKGKDCNLQKPEGIKQREAYFKTAKHLITQQK
VDVTSLSMAEDTALHLACAANDKGLVELLLGRDEIEVNLKNAFXTTTLRR
GNWLPANGSQAASTGELFKPIQQQIRISNTRGFETKERF
Run BLAST on NCBI

transcript from alignment at scaffold_425:165240..171993+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064841 ID=TCONS_00064841|Name=TCONS_00064841|organism=Clytia hemisphaerica|type=transcript|length=6754bp|location=Sequence derived from alignment at scaffold_425:165240..171993+ (Clytia hemisphaerica)
CATCGGATGCTGTTTTACTGAAGCAATGGAATGCTAATTCACAACAGCAG
ATTAAAGAGGAAGAGTTTGACTTAACTTTCAATGAAGTTAATCCaacaaa
ccaaaatattttggcagAATTAACAGCACAAACTCAAAAACTTGAGAACA
CGCTACCCCTAATTCAACAAGAAATACAGAAAGTGCCAACAGAATCTTCA
GAGCAGAAATATTCTCCCAGAGAAAATATTGACATGGATGGAGATACGTA
CGTTTATTTTTATCTATATTGCCTGTATTACCTTGATAAGATATCCCTTA
AGATATACGTGTGTTTCGCTGACTGaataaaaagtgaaataaaTAGAGAA
GTTGTGTAGAAGGCACTGAGACCCATTTTGACAACCTTTAAGGCATTGat
agaggtgccaactctcacacATTGGGCGTGAGACTCATGCATTTCCACAC
TGTCTCACGCAAGGTTGATTTCTCACACATTTTTGAGATTTGAGTTTTCC
CCGTTTTTCtgattctttgtaaaaagtttccctgatttcccaatttttgg
taaaagtttccttgattttccgattttcggaaaaaagtttccctgatttc
tgatttttttgaaaaatttttctgatttctgatatcggaaaattagaaaa
accaaGCTAAAATTTCGGATTCCgcttcgaaatttttatctcatgcAATA
TGAATATCTCAAGCAGGCCAaattttagaaaggcaaggcagtgtccgttg
gtggccaaaaagggcactttttcctATGTTGTTCCACTAAAAAGGcagtt
tttaccaatatttaaGTAATTTCAGGAGGGGCATAAAGAATTGGCAGGTC
TGATATTTtacatttaaaagattttgaatgGAACACGTTGATTAAGAACC
TCTCAATCAAAAGAAACTCTGCATAGTGCAtgcccccccccaatattttg
caaagtaattttttttactttaaaaaatcttatatataccgtttagaggg
gtgaaataagggtaaaaagtcgaaaattttcTTCGTCGCCCAACCATGGT
GGGCGGCAtattttttggccccctcaattcgattcgcacgccgggggcca
tgtaGTGTTTAGGAAATTCCCAAAAGCCAGTCTTATGAATGATTTTCCTA
ACATCTAAAAACAGATTtcataccgtaacttggtcgatattagaccaact
tacggtatgcaCAATGTGCATGTGTAAAAAAAGCATAAGGCTTAAAATCA
GCCAGTCTTACCTCCACAAAGTGATATGTGGCAAACCTTTCAATAAGGTG
TATACCAAGGAAAGAAGGATGAGCAAAACTTAGTTTTTACACTAATATTT
GAGAAACTTATTTTGAAAAGAGACCTTTTTAGCTACCTTTTTAGTCTCAG
CCATATTAGCCAAAATTTGAGCTTGAAAAAGTCACTGCTGaaagatataa
aataaaatgagtTTTTAATTGCACAAAACTTTGCGCTTCAGCTTGATCCC
AATGTATGAGTCCTGCAAAAAACCTCTAGAATACACTGCTAGGaatgatt
tgaaaaatacaaggaTAACATCAAAAATGAGCAATTTAATGCTAATAAAA
TCGATAATAAaataacaacctatttttttcttattcaagTATGGTAATTA
TTAAGTActtacaaaaattacaaacaaatttaaacaaagatattttatag
aatagagaaaaatttttgtaaactaCTTAAATCTATATTCAAATTTAAGT
TTtgtatataattataaaaaagcaGCTCTGcaataaagcaaaacaatgaa
GTCAAAAAACTTTCCTCTCATTCAATGATGTTCTACTTCATTTTGAACAT
ATTGTGTGCTCGAATCTTTTTCGATGCCTTTCATAAATTCATGCATGTCA
TCGTGTCCTTCATCTTCAAGTTGATGACTTTCCTCTGGTTTCTTTGTTGT
tgtcattttgtatttatcgGGAATATTACCAACAATTTCAACTTCTAGGA
CCTTTCCAGTCTGTTTAGTTTTAGGCTTGTCTTCTTTCGTCAAAATCATT
TCTTCAACACACTCATTCTCAACAGTTTCATTTTGAGATggtattttttc
accaaaagaTGAAACAAAGTCTTTCATATCATCCTCAGCcatcttgattt
gatttgttttgataaaaaaattacaaaaaataattttcttatacTAACTC
AAAAACAGCATGCAAAATCTTTCTTCATACTAATTCAAATAAGCCACACA
GTTCCTGATCAGCTCCTCTGTATAACCTTTGAGGAACCTTTCATCAAATA
CAACTCTATCAGTTTCGCTGAAAAGTTAAAAGACAGGATCCTTGAGATTG
TTGATTTCACTGAGCATGCTGTTTCAAGCATTTCTTTCTTTCAGCGTTTC
AGTTTGGAGAAATTAACTATATTATCTAACTTATAAATATAATGAATCAT
ACTAGAGATTTTCAAGGGAAAACAAGTAAAGTAAGATTTGCCTCATCCAA
GACATCTCTTgatacaaatttttacaaacttGATATTCCTTTCTAGGCCA
TTGCATATTCTGGTAGTCCGATGTGAAGGGAGAAACAAGCAAACGAGAGG
TTTTGGATTATCTCAGAGAAATAACTATGAAAATGATCAGGCCAGAAAAG
ATTTCTTTGATAAAGCACATCTCTACAAACAATACGTCAACCGACAAAAC
AATGATGGAATGGTACGTatgaaaaaaaggttttaaCACTTCTAGCGTGA
TGAAGTATTAAGTTATGGGGGTAATATTGACCCTTCTTTTCATCATATAG
GATAAATAGCAAAGGGGATAAGGAAGAGTACTGTTGCATAAACATAACCT
TGTTGATTCCAATCAATGCAAGATTTAGGTTTGAATTTAAAGGggtaatc
agatggtttgtaattTATGTCCCCATATGGCATGTGGGATCCTTTtattg
tcctgagcaaaatctcaaaatatttttaactattttccaaagtcgagatt
ttaagttacaagtttttggcttttagaataaaacaatagaatttcaacgt
aataACCGTGTAAGaaccctttttcaaaaatttcaaattttagtttctcg
atcttggaaaattgttacacaaaaatactttgaggttttactaATGTACT
AAGGACCACAGAAGATTTCTGTAATCTAAATATCTCTAacaatctgatta
tccctttaatgtTTTTTACATTTAGACACCACTACACTACGCCGTGGAAA
TTGGTTGCCCGCAAATGGTTCACAAGCTGCTTCAACTGGGGAGCTGTTTA
AACCGATTCAACAACAGATTAGAATCTCCAATACACGTGGCTTTGAGACA
AAGGAAAGATTCTGATTTGTACAATTTCACAACAATGGAACATTTGAAAC
AGATTGTGGAGCAACTTTTACGTGCTAACCAAGCAAGATATGGTGACGAT
CACATGGATTTGAACAAGAAGGATAAAAATGGTATGTCATCAATAATCAA
tattctttgtttatttttacgccagacaaataaacaaagcgATCCCAAAA
AGTCCCTTTCTAAAGATATGATTTGACTCAAAGAGGCTCAAAGTTCAGCT
GACTGGCTAATTTGGAAATTCCAAATGAACACGCGAGGGAAAATCTTAAT
CAACATTCGTAGAAAAGCTGATTCATGAATttatattgtatattttttta
ataagaattcgTAATGAAACAAGAATTTTTCACCTTAGGTCTGACTTGTG
TTCATCTGGCTTGCTTGTACGCAAACCACGAAGCAACAAATTTGGTCAAT
CTATTGAAATGCTATGGTGCAGATCTTGATGAAAAGGTACTTTGAGTTTT
TTTCTGGTTCTGTCAGTTCCAACAATTATTCTTATACGAAGCTCGTGGTC
ATCTGGTTTTACCCAATTTACACATCAAGTTTCTATGAAAGACCAGTGGG
GAAGTGAGTACTGATGTTTAGAAGAGTTATCtctaaatttccaaaagaac
AGCCTTTAATTGCTTGGTTTTCAGCCaactaaaagtttttttgattagaa
caaactatataagaacataaggcttcgatggccaaactATATAGAACAAC
TTAAGAAAATGGGaacattttgagattattttcagGTCTAAAACTAAAAA
GAACATCCAAGAGATTcgaaaaactttggacgttctTATTAAAAAGACGT
GTAATAAGTCAGCCGTCCATTTCCTTTGACCTTGTAACCTGACACTTTAA
CAACAAGATCCGTTCCTCGTTTACAGGAAGATCGACAAGGATTCACTCCG
CTACAGTTCATCATCAACAAAGGGAAGGATTGTAATCTTCAAAAGCCTGA
AGGAATCAAACAAAGAGAGGCTTACTTCAAGACAGCAAAGCATCTGATCA
CCCAACAGAAAGTCGATGTGACGTCACTATCCATGGCTGAAGACACTGCG
TTGCATTTAGCCTGTGCAGCCAACGATAAGGGGCTAGTGGAGTTGCTGTT
GGGTCGTGATGAAATTGAAGTCAACCTGAAGAATGCGTTCAANACCACTA
CACTACGCCGTGGAAATTGGTTGCCCGCAAATGGTTCACAAGCTGCTTCA
ACTGGGGAGCTGTTTAAACCGATTCAACAACAGATTAGAATCTCCAATAC
ACGTGGCTTTGAGACAAAGGAAAGATTCTGATTTGTACAATTTCACAACA
ATGGAACATTTGAAACAGATTGTGGAGCAACTTTTACGTGCTAACCAAGC
AAGATATGGTGACGATCACATGGATTTGAACAAGAAGGATAAAAATGGTA
TGTCATCAATAATCAAtattctttgtttatttttacgccagacaaataaa
caaagcgATGCCAAAAAGTCCCTTTCTAAAGATATGATTTGACTCAAAGA
GGCTCAAAGTTCAGCTGACTGGCTAATTTGGAAATTCCAAATGAACACGC
GAGGGAAAATCTTAATCAACATTCGTAGAAAAGCTGATTCATGAATttat
attgtatatttttttatataagaattcGTAATGAAACAAGAATTTTTCAC
CTTAGGTCTGACTTGTGTTCATCTGGCTTGCTTGTACGCAAACCACGAAG
CAACAAATTTGGTCAATCTATTGAAATGCTATGGTGCAGATCTTGATGAA
AAGGTACTTTGAGTTTTTTTCTGGTTCTGTCAGTTCCAACAATTATTCAT
CTTATACGAAGCTCGTGGTCATCTGGTTTTACCCAATTTACACATCGAGT
TTCTATGAAAGACCAGTGGGGAAGTGAGTACTGATGTTTAGAAGAGTTAT
CtctaaatttccaaaagaacAGCCTTTAATTGCTTGGTTTTCAGCCaact
aaaagtttttttgattagaacaaactatataagaacataaggcttcgatg
gccaaactATATAGAACAACTTAAGAAAATGGGaacattttgagattatt
ttcagGTCTAAAACTAAAAAGAACATCCAAGAGATTcgaaaaactttgga
cgttttaATTAAAAAGACGTGTAATAAGTCAGCCGTTCATTCCTTTTACC
TGACACTTTAACAACAAGATCCGTTCCTCGTTTACAGGAAGATCGACAAG
GATTCACTCCTCTACAGTTCATCATCAACAAAGGGAAGGATTGTAATCTT
CAAAAGCCTGAAGGAATCAAACAAAGAAATGCTTACTTCAAGACAGCAAA
GCATCTGATCACCCAACAGAAAGTCGATGTGACGTCACTATCCATGGCTG
AAGACACTGCATTGCATTTAGCCTGTGCAGCCAACGATAAGGGGCTAGTG
GAGTTGCTGTTGGGTCGTGATGAAATTGAAGTCAACCTGAAGAATGCGTT
CaagaaaaatgagaaagatTTGACGGATGACGACcaggtaattttgaaaa
aaataatttctttttactGGGAGACTTCAATCACATGTCagcatttcaac
ttttaaatagggataaattaaatgaagaaataTATAAAATCCACCACTTC
CTTCTGCCTGGAATATCAGTATTAAAATGTGCTCACGTAAATATAACATT
TCCACTTTACTGAAACAAAATTGAGTTTTATATCTTTCTTCGATCTACGG
CAACAAAAGATGTTTATAGTCATCGAAAATGGGGCATGATTCTCCCTGAT
TTTGCGATTGTCTTGATGCTCTAGAATATATTTTTAACGAATTACATTTC
TGTATAATTTCAGATCAAAGAGATGCTTGAAGTGAAATatcgtcaaaaaa
gaagaaaacgaaagaaTAACGAACAAGGGGTGACAAGCGGCAAGGCGAAA
AAGGCGAAATAAATTCAATATGTTTTCATTTCGGCGAAGacctgtaaaaa
tgaaaaataaccatatatacatttttattcagttttatttttttcagttt
taaaaatttttattgtaattaaGCATAAGTAACCATGAAAAATAACATTt
ggaaaatccaaaaaaatcatttttgtaaatagaGGCGAAATTTTGatatt
aaaaaaagttcaaaaggattcgtatttttttttacttttgagcttttaaa
atttaaaatgtaaatataTTATGTAGATTATTTAAAGATTGATCGATACT
TTAAATTGCTTGCCCCCCGTATCTCGTACCAGTTGtcacatacacgcttt
tttataagaatagtgtactttggatgagggccaagtattcttaagaaatt
gacaaaatcgagggtgaaatattcttaacatatacttgattttttagact
tgac

Coding sequence (CDS) from alignment at scaffold_425:165240..171993+

>TCONS_00064841 ID=TCONS_00064841|Name=TCONS_00064841|organism=Clytia hemisphaerica|type=CDS|length=5850bp|location=Sequence derived from alignment at scaffold_425:165240..171993+ (Clytia hemisphaerica)
TCGGATGCTGTTTTACTGAAGCAATGGAATGCTAATTCACAACAGCAGAT
TAAAGAGGAAGAGTTTGACTTAACTTTCAATGAAGTTAATCCaacaaacc
aaaatattttggcagAATTAACAGCACAAACTCAAAAACTTGAGAACACG
CTACCCCTAATTCAACAAGAAATACAGAAAGTGCCAACAGAATCTTCAGA
GCAGAAATATTCTCCCAGAGAAAATATTGACATGGATGGAGATACGCCAT
TGCATATTCTGGTAGTCCGATGTGAAGGGAGAAACAAGCAAACGAGAGGT
TTTGGATTATCTCAGAGAAATAACTATGAAAATGATCAGGCCAGAAAAGA
TTTCTTTGATAAAGCACATCTCTACAAACAATACGTCAACCGACAAAACA
ATGATGGAATGACACCACTACACTACGCCGTGGAAATTGGTTGCCCGCAA
ATGGTTCACAAGCTGCTTCAACTGGGGAGCTGTTTAAACCGATTCAACAA
CAGATTAGAATCTCCAATACACGTGGCTTTGAGACAAAGGAAAGATTCTG
ATTTGTACAATTTCACAACAATGGAACATTTGAAACAGATTGTGGAGCAA
CTTTTACGTGCTAACCAAGCAAGATATGGTGACGATCACATGGATTTGAA
CAAGAAGGATAAAAATGGTCTGACTTGTGTTCATCTGGCTTGCTTGTACG
CAAACCACGAAGCAACAAATTTGGTCAATCTATTGAAATGCTATGGTGCA
GATCTTGATGAAAAGGAAGATCGACAAGGATTCACTCCGCTACAGTTCAT
CATCAACAAAGGGAAGGATTGTAATCTTCAAAAGCCTGAAGGAATCAAAC
AAAGAGAGGCTTACTTCAAGACAGCAAAGCATCTGATCACCCAACAGAAA
GTCGATGTGACGTCACTATCCATGGCTGAAGACACTGCGTTGCATTTAGC
CTGTGCAGCCAACGATAAGGGGCTAGTGGAGTTGCTGTTGGGTCGTGATG
AAATTGAAGTCAACCTGAAGAATGCGTTCAANACCACTACACTACGCCGT
GGAAATTGGTTGCCCGCAAATGGTTCACAAGCTGCTTCAACTGGGGAGCT
GTTTAAACCGATTCAACAACAGATTAGAATCTCCAATACACGTGGCTTTG
AGACAAAGGAAAGATTCTGATCGGATGCTGTTTTACTGAAGCAATGGAAT
GCTAATTCACAACAGCAGATTAAAGAGGAAGAGTTTGACTTAACTTTCAA
TGAAGTTAATCCaacaaaccaaaatattttggcagAATTAACAGCACAAA
CTCAAAAACTTGAGAACACGCTACCCCTAATTCAACAAGAAATACAGAAA
GTGCCAACAGAATCTTCAGAGCAGAAATATTCTCCCAGAGAAAATATTGA
CATGGATGGAGATACGCCATTGCATATTCTGGTAGTCCGATGTGAAGGGA
GAAACAAGCAAACGAGAGGTTTTGGATTATCTCAGAGAAATAACTATGAA
AATGATCAGGCCAGAAAAGATTTCTTTGATAAAGCACATCTCTACAAACA
ATACGTCAACCGACAAAACAATGATGGAATGACACCACTACACTACGCCG
TGGAAATTGGTTGCCCGCAAATGGTTCACAAGCTGCTTCAACTGGGGAGC
TGTTTAAACCGATTCAACAACAGATTAGAATCTCCAATACACGTGGCTTT
GAGACAAAGGAAAGATTCTGATTTGTACAATTTCACAACAATGGAACATT
TGAAACAGATTGTGGAGCAACTTTTACGTGCTAACCAAGCAAGATATGGT
GACGATCACATGGATTTGAACAAGAAGGATAAAAATGGTCTGACTTGTGT
TCATCTGGCTTGCTTGTACGCAAACCACGAAGCAACAAATTTGGTCAATC
TATTGAAATGCTATGGTGCAGATCTTGATGAAAAGGAAGATCGACAAGGA
TTCACTCCGCTACAGTTCATCATCAACAAAGGGAAGGATTGTAATCTTCA
AAAGCCTGAAGGAATCAAACAAAGAGAGGCTTACTTCAAGACAGCAAAGC
ATCTGATCACCCAACAGAAAGTCGATGTGACGTCACTATCCATGGCTGAA
GACACTGCGTTGCATTTAGCCTGTGCAGCCAACGATAAGGGGCTAGTGGA
GTTGCTGTTGGGTCGTGATGAAATTGAAGTCAACCTGAAGAATGCGTTCA
ANACCACTACACTACGCCGTGGAAATTGGTTGCCCGCAAATGGTTCACAA
GCTGCTTCAACTGGGGAGCTGTTTAAACCGATTCAACAACAGATTAGAAT
CTCCAATACACGTGGCTTTGAGACAAAGGAAAGATTCTGATCGGATGCTG
TTTTACTGAAGCAATGGAATGCTAATTCACAACAGCAGATTAAAGAGGAA
GAGTTTGACTTAACTTTCAATGAAGTTAATCCaacaaaccaaaatatttt
ggcagAATTAACAGCACAAACTCAAAAACTTGAGAACACGCTACCCCTAA
TTCAACAAGAAATACAGAAAGTGCCAACAGAATCTTCAGAGCAGAAATAT
TCTCCCAGAGAAAATATTGACATGGATGGAGATACGCCATTGCATATTCT
GGTAGTCCGATGTGAAGGGAGAAACAAGCAAACGAGAGGTTTTGGATTAT
CTCAGAGAAATAACTATGAAAATGATCAGGCCAGAAAAGATTTCTTTGAT
AAAGCACATCTCTACAAACAATACGTCAACCGACAAAACAATGATGGAAT
GACACCACTACACTACGCCGTGGAAATTGGTTGCCCGCAAATGGTTCACA
AGCTGCTTCAACTGGGGAGCTGTTTAAACCGATTCAACAACAGATTAGAA
TCTCCAATACACGTGGCTTTGAGACAAAGGAAAGATTCTGATTTGTACAA
TTTCACAACAATGGAACATTTGAAACAGATTGTGGAGCAACTTTTACGTG
CTAACCAAGCAAGATATGGTGACGATCACATGGATTTGAACAAGAAGGAT
AAAAATGGTCTGACTTGTGTTCATCTGGCTTGCTTGTACGCAAACCACGA
AGCAACAAATTTGGTCAATCTATTGAAATGCTATGGTGCAGATCTTGATG
AAAAGGAAGATCGACAAGGATTCACTCCGCTACAGTTCATCATCAACAAA
GGGAAGGATTGTAATCTTCAAAAGCCTGAAGGAATCAAACAAAGAGAGGC
TTACTTCAAGACAGCAAAGCATCTGATCACCCAACAGAAAGTCGATGTGA
CGTCACTATCCATGGCTGAAGACACTGCGTTGCATTTAGCCTGTGCAGCC
AACGATAAGGGGCTAGTGGAGTTGCTGTTGGGTCGTGATGAAATTGAAGT
CAACCTGAAGAATGCGTTCAANACCACTACACTACGCCGTGGAAATTGGT
TGCCCGCAAATGGTTCACAAGCTGCTTCAACTGGGGAGCTGTTTAAACCG
ATTCAACAACAGATTAGAATCTCCAATACACGTGGCTTTGAGACAAAGGA
AAGATTCTGATCGGATGCTGTTTTACTGAAGCAATGGAATGCTAATTCAC
AACAGCAGATTAAAGAGGAAGAGTTTGACTTAACTTTCAATGAAGTTAAT
CCaacaaaccaaaatattttggcagAATTAACAGCACAAACTCAAAAACT
TGAGAACACGCTACCCCTAATTCAACAAGAAATACAGAAAGTGCCAACAG
AATCTTCAGAGCAGAAATATTCTCCCAGAGAAAATATTGACATGGATGGA
GATACGCCATTGCATATTCTGGTAGTCCGATGTGAAGGGAGAAACAAGCA
AACGAGAGGTTTTGGATTATCTCAGAGAAATAACTATGAAAATGATCAGG
CCAGAAAAGATTTCTTTGATAAAGCACATCTCTACAAACAATACGTCAAC
CGACAAAACAATGATGGAATGACACCACTACACTACGCCGTGGAAATTGG
TTGCCCGCAAATGGTTCACAAGCTGCTTCAACTGGGGAGCTGTTTAAACC
GATTCAACAACAGATTAGAATCTCCAATACACGTGGCTTTGAGACAAAGG
AAAGATTCTGATTTGTACAATTTCACAACAATGGAACATTTGAAACAGAT
TGTGGAGCAACTTTTACGTGCTAACCAAGCAAGATATGGTGACGATCACA
TGGATTTGAACAAGAAGGATAAAAATGGTCTGACTTGTGTTCATCTGGCT
TGCTTGTACGCAAACCACGAAGCAACAAATTTGGTCAATCTATTGAAATG
CTATGGTGCAGATCTTGATGAAAAGGAAGATCGACAAGGATTCACTCCGC
TACAGTTCATCATCAACAAAGGGAAGGATTGTAATCTTCAAAAGCCTGAA
GGAATCAAACAAAGAGAGGCTTACTTCAAGACAGCAAAGCATCTGATCAC
CCAACAGAAAGTCGATGTGACGTCACTATCCATGGCTGAAGACACTGCGT
TGCATTTAGCCTGTGCAGCCAACGATAAGGGGCTAGTGGAGTTGCTGTTG
GGTCGTGATGAAATTGAAGTCAACCTGAAGAATGCGTTCAANACCACTAC
ACTACGCCGTGGAAATTGGTTGCCCGCAAATGGTTCACAAGCTGCTTCAA
CTGGGGAGCTGTTTAAACCGATTCAACAACAGATTAGAATCTCCAATACA
CGTGGCTTTGAGACAAAGGAAAGATTCTGATCGGATGCTGTTTTACTGAA
GCAATGGAATGCTAATTCACAACAGCAGATTAAAGAGGAAGAGTTTGACT
TAACTTTCAATGAAGTTAATCCaacaaaccaaaatattttggcagAATTA
ACAGCACAAACTCAAAAACTTGAGAACACGCTACCCCTAATTCAACAAGA
AATACAGAAAGTGCCAACAGAATCTTCAGAGCAGAAATATTCTCCCAGAG
AAAATATTGACATGGATGGAGATACGCCATTGCATATTCTGGTAGTCCGA
TGTGAAGGGAGAAACAAGCAAACGAGAGGTTTTGGATTATCTCAGAGAAA
TAACTATGAAAATGATCAGGCCAGAAAAGATTTCTTTGATAAAGCACATC
TCTACAAACAATACGTCAACCGACAAAACAATGATGGAATGACACCACTA
CACTACGCCGTGGAAATTGGTTGCCCGCAAATGGTTCACAAGCTGCTTCA
ACTGGGGAGCTGTTTAAACCGATTCAACAACAGATTAGAATCTCCAATAC
ACGTGGCTTTGAGACAAAGGAAAGATTCTGATTTGTACAATTTCACAACA
ATGGAACATTTGAAACAGATTGTGGAGCAACTTTTACGTGCTAACCAAGC
AAGATATGGTGACGATCACATGGATTTGAACAAGAAGGATAAAAATGGTC
TGACTTGTGTTCATCTGGCTTGCTTGTACGCAAACCACGAAGCAACAAAT
TTGGTCAATCTATTGAAATGCTATGGTGCAGATCTTGATGAAAAGGAAGA
TCGACAAGGATTCACTCCGCTACAGTTCATCATCAACAAAGGGAAGGATT
GTAATCTTCAAAAGCCTGAAGGAATCAAACAAAGAGAGGCTTACTTCAAG
ACAGCAAAGCATCTGATCACCCAACAGAAAGTCGATGTGACGTCACTATC
CATGGCTGAAGACACTGCGTTGCATTTAGCCTGTGCAGCCAACGATAAGG
GGCTAGTGGAGTTGCTGTTGGGTCGTGATGAAATTGAAGTCAACCTGAAG
AATGCGTTCAANACCACTACACTACGCCGTGGAAATTGGTTGCCCGCAAA
TGGTTCACAAGCTGCTTCAACTGGGGAGCTGTTTAAACCGATTCAACAAC
AGATTAGAATCTCCAATACACGTGGCTTTGAGACAAAGGAAAGATTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040668XLOC_040668Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064841-exon-scaffold_425-1491911889:165240..165486TCONS_00064841-exon-scaffold_425-1491911889:165240..165486Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1510915933:165240..165486TCONS_00064841-exon-scaffold_425-1510915933:165240..165486Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1575043694:165240..165486TCONS_00064841-exon-scaffold_425-1575043694:165240..165486Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1491911889:167786..167951TCONS_00064841-exon-scaffold_425-1491911889:167786..167951Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1510915933:167786..167951TCONS_00064841-exon-scaffold_425-1510915933:167786..167951Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1575043694:167786..167951TCONS_00064841-exon-scaffold_425-1575043694:167786..167951Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1491911889:168465..168720TCONS_00064841-exon-scaffold_425-1491911889:168465..168720Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1510915933:168465..168720TCONS_00064841-exon-scaffold_425-1510915933:168465..168720Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1575043694:168465..168720TCONS_00064841-exon-scaffold_425-1575043694:168465..168720Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1491911889:168978..169075TCONS_00064841-exon-scaffold_425-1491911889:168978..169075Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1510915933:168978..169075TCONS_00064841-exon-scaffold_425-1510915933:168978..169075Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1575043694:168978..169075TCONS_00064841-exon-scaffold_425-1575043694:168978..169075Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1491911889:169516..170036TCONS_00064841-exon-scaffold_425-1491911889:169516..170036Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1510915933:169516..170036TCONS_00064841-exon-scaffold_425-1510915933:169516..170036Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1575043694:169516..170036TCONS_00064841-exon-scaffold_425-1575043694:169516..170036Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1491911889:170295..170392TCONS_00064841-exon-scaffold_425-1491911889:170295..170392Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1510915933:170295..170392TCONS_00064841-exon-scaffold_425-1510915933:170295..170392Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1575043694:170295..170392TCONS_00064841-exon-scaffold_425-1575043694:170295..170392Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1491911889:170827..171126TCONS_00064841-exon-scaffold_425-1491911889:170827..171126Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1510915933:170827..171126TCONS_00064841-exon-scaffold_425-1510915933:170827..171126Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1575043694:170827..171126TCONS_00064841-exon-scaffold_425-1575043694:170827..171126Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1491911889:171453..171993TCONS_00064841-exon-scaffold_425-1491911889:171453..171993Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1510915933:171453..171993TCONS_00064841-exon-scaffold_425-1510915933:171453..171993Clytia hemisphaericaexon
TCONS_00064841-exon-scaffold_425-1575043694:171453..171993TCONS_00064841-exon-scaffold_425-1575043694:171453..171993Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064841-proteinTCONS_00064841-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:165240..171993 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.00601	1.34138	0.389367	0.76187	3.78731	1.77124	6.7792	9.72686	7.29299	25.8443	16.0847	10.917	26.6065	23.9892	16.8258	23.0162	6.1527	8.11442	21.0197	24.1633	4.10071	3.00027	6.17729	8.42407	13.3533	12.961	16.1895	15.7681	8.14269	3.24067
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064841 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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