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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064821 ID=TCONS_00064821|Name=TCONS_00064821|organism=Clytia hemisphaerica|type=transcript|length=1049bp
AAAGACTTAAAGACGAAAATTAAGTCCCTCGTTTAGCctgattttagaat
ttttcaagGTATACTTAAACTCAGTTTTTAATTTTAACGTAATACTTTAC
TCTATAGGCCGAACAAGAAGTACCAGATTGGTTCGAGGATTTTGCTTTGC
GGGCGGTCGGTACAGGTTACGGAACTGATCAGTCACAATTCCGCGACCAA
CGTTCTAAGTTCTCGCGAAACGGAGGCGGTGGTGGTATGGGCGGAGTGCC
AACTCAAGGGAAAGTTGTGTCATTGGCTAACACAGCAGATGACGATGATG
AAGAATGGTGAAAGGGCAGAATGAGAATTCTAGAAGAGCTCTATCTGTAC
TCCCCCTTCCATCATTGGGTCGGTATCGATTGGTCGTTGACATTTCTTTA
AAACCAAGACCCTgttgaaaatacaaaatgagGTTTGGGTTTTTTGGGGA
ACCAAcaattggaagaaaaaaaataacttcaCTTAAATTGTTGCATTTTA
CTTGCTATGGTAATGTATATCGAGATATGAATCTAACGCTGACTTGAAAT
TTGTTCAACATTTTATACTATTTGGCTGTTTTTAgggtttaatatttttt
tgaagataattAGTAGGTCAGCTAATCAGGCTTAGTACTTTTGGATACTT
AAAAAGGCCTCCCTCTTGCTGCTACTAAATGTTCTTTAATGTTTTAACAT
CTTGCTTTGATTCTTATGTCTGTAAATTCAAGACATTATTATGTaaaccc
ccccctcccccccgtCCCGTCTATAATGTTCCAACCCACCCGCCTTGTTC
CTTCTCCCTGTCTTTTAGACGTATTAAGTGTCCCTTCCCTAGATAACAAC
TGGCAGTCGAAAGAAAACCCATCCATACTTTCACACTTTTActtattttc
ttacatttttgtatctttttatAACTAGAGTagggtatttttcattttca
agatgtttttattttacttttttgctttttgtatatatttttgtgttttt
atgtaaaaaaagaaagaggagCTTTATTTGAACTTTGTCAAAACTGAAA Run BLAST on NCBI transcript from alignment at scaffold_424:83498..84546 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064821 ID=TCONS_00064821|Name=TCONS_00064821|organism=Clytia hemisphaerica|type=transcript|length=1049bp|location=Sequence derived from alignment at scaffold_424:83498..84546 (Clytia hemisphaerica)
TTTCAGTTTTGACAAAGTTCAAATAAAGctcctctttctttttttacata
aaaacacaaaaatatatacaaaaagcaaaaaagtaaaataaaaacatctt
gaaaatgaaaaataccctACTCTAGTTataaaaagatacaaaaatgtaag
aaaataagTAAAAGTGTGAAAGTATGGATGGGTTTTCTTTCGACTGCCAG
TTGTTATCTAGGGAAGGGACACTTAATACGTCTAAAAGACAGGGAGAAGG
AACAAGGCGGGTGGGTTGGAACATTATAGACGGGacgggggggagggggg
ggtttACATAATAATGTCTTGAATTTACAGACATAAGAATCAAAGCAAGA
TGTTAAAACATTAAAGAACATTTAGTAGCAGCAAGAGGGAGGCCTTTTTA
AGTATCCAAAAGTACTAAGCCTGATTAGCTGACCTACTaattatcttcaa
aaaaatattaaacccTAAAAACAGCCAAATAGTATAAAATGTTGAACAAA
TTTCAAGTCAGCGTTAGATTCATATCTCGATATACATTACCATAGCAAGT
AAAATGCAACAATTTAAGtgaagttattttttttcttccaattgTTGGTT
CCCCAAAAAACCCAAACctcattttgtattttcaacAGGGTCTTGGTTTT
AAAGAAATGTCAACGACCAATCGATACCGACCCAATGATGGAAGGGGGAG
TACAGATAGAGCTCTTCTAGAATTCTCATTCTGCCCTTTCACCATTCTTC
ATCATCGTCATCTGCTGTGTTAGCCAATGACACAACTTTCCCTTGAGTTG
GCACTCCGCCCATACCACCACCGCCTCCGTTTCGCGAGAACTTAGAACGT
TGGTCGCGGAATTGTGACTGATCAGTTCCGTAACCTGTACCGACCGCCCG
CAAAGCAAAATCCTCGAACCAATCTGGTACTTCTTGTTCGGCCTATAGAG
TAAAGTATTACGTTAAAATTAAAAACTGAGTTTAAGTATACcttgaaaaa
ttctaaaatcagGCTAAACGAGGGACTTAATTTTCGTCTTTAAGTCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064821-exon-scaffold_424-1491911889:83498..84546 | TCONS_00064821-exon-scaffold_424-1491911889:83498..84546 | Clytia hemisphaerica | exon |
| TCONS_00064821-exon-scaffold_424-1510915933:83498..84546 | TCONS_00064821-exon-scaffold_424-1510915933:83498..84546 | Clytia hemisphaerica | exon |
| TCONS_00064821-exon-scaffold_424-1575043694:83498..84546 | TCONS_00064821-exon-scaffold_424-1575043694:83498..84546 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_424 | supercontig | scaffold_424:83498..84546 . |
Blast
The following BLAST results are available for this feature:
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