TCONS_00064777 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064777
Unique NameTCONS_00064777
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064777 ID=TCONS_00064777|Name=TCONS_00064777|organism=Clytia hemisphaerica|type=transcript|length=2180bp
GTTTCTTTGGCGTAGATTTGAAGCAacttgaaaagtttagacagtGAACT
TAAATTACCTAACTTTTTGAAATACGAACGAATTCATGTTGGTATACAAC
ACATTTCATGGTTGTCTTCTTACTGATAAAGATAGCTGACGACTTCAGAT
ATGAATTACAAATTACTTACAAGCCTGGTGCTTCTTGCCGTGATTATTAC
GGTCAAAAGTGAACGAGGATGCAAGTCAGGATATTTCTGCTGTAAATCAA
ATCCTTTGCAAGGATATTGCACTTATCAAGGATACGTACCAGGAGGAAAG
AAAGTGATGTTGAGACCTATCAGAGCACCTGTAGCTAATTTGCAGATGGA
TGCAGTTGCAACATATGGTACATATCTTGGTTATGCTTTCAGCGCTACAA
GTGCTCAGGTTGACGTAGCAGCTCTGGCAAAGAACTTCGCAAAATATGCT
GAGGTGATGTCAGTAGGTCTTGGCGTCTTCGGATCAGTTGTTGGAATCGC
GGCAGATAAAGCTACACCCACACCAGCAGATATAATTAATGCTTGTAACG
TTGCTCTTGAAAAATTGACAGATGAAGTTAATGATCAATTCTCTAACATG
AAAGATTATGTTGACCAACAGATCATCCAGCAAGACAAACTCCTCATGAA
CCTCAACTACAAACAGTATTACAGCTACTATACTGGATGCTTGACGGAGA
TAACTGAAGATGACATGCTGGATTGTTTGAAAGCAGTCAATCGTTTATCC
GGTAGTGACTCAGCCAAATTCCTTCGTTTCTTCGAACATAAATCGAATCC
CAATTGGAATCCATCAGTCGATGACGTCAAACGCATGGAagctattttca
tcattttcagaGATTACGCCGATCTCCGAATCATGATTTTACTTTCTCTT
AGTGCCATGTACGAGCGCAAGCAGCAAACTACGAACAATAAAAAAGCAGC
TAAAACCTACCTGACTGAATTGAAGAATGACATTGAAGAATTCATGGATT
ATGCCAACTTTACTTACACCCAAATCTATAACAAACATAACACACATTGG
GACTACTTAACAGAAACCAAAAAATGTACCACACGATATCAACGAACAAT
TAAAGAAGGATGGTTGGTTGCGGTTCATACCTGGGATGCAATAAATTGCG
GATCtcgattttcggaatttcttcAGGAACCTGAAAGATGCTGGCATGAT
GGTTACGTGAGGAAGCAAGGTAACTGTCCATGTAGTGGATCAATGGAAGA
CATGTACGCAGGGAAAACAAGCACACCTTTATGTCCAATGGTAAAATACG
GATCAAATGCAGATACATGGGCCTCCGTAATGACTTTATGGAATTTTAAC
ATCAAGagaaTGGGTCCAGAATTTCGTTTATACCGGGAGCAAGATTTAAA
ATCATTGGAGAATTATTGGAACGCCAATATTTTCGTGAACTTCCCAGTAT
GGAAGAATATAGTACAAGGTGTGGAAAAGAAGTTGAAAACGGTTTATCAT
AATGTTCAAGATGAGCCATCTCAGGATAATGATGCTGTTCTTAAGCGTGT
TGAGTCAGCCAAACGTTGGCAGTTTATGGAAGAAGATGCTTTACATGATG
AGATGGCGCTTAGAGAATATTAATCTCAAAGAGAAGAATTTACCAAGAGA
AAACATACTTAATGTTATAAGAAAGGATTCCCAGTGACATGAAATTAATA
CTGAATTTTTCCGATTTCTTTATGAAAAGTTGANAGTGTCATGAAATTAA
TACTGAATTTTTCCGATTTCTTTATGAAAAGTTGACTAGGGAATAAATTT
TACAAACATTTGTATCACCCCCAATTTACTCGGGAAACTAATTAAAGCAC
GTTAAGTCATTATATTTGTTCTCACGATTTTCGAGTTTGGTTctgaattt
tcatttctttattccTATATtataaaagatttattttcaatgtatcCTAG
TAGTAGTAAGATCTTAGAAACTATTTATCTTGTAACAGTAGcgtgcggcc
acctccttagtttagccttcatgtctatgagtgtggtcgctcgtcTCGCT
TATTAAGGCAAATATATTCATTACTTACTTACGTCCAAATTTACCTTAAT
TTTTTAGGACCCTTAGCTTAGCACCCGCTAAATAAAACATCAACTCAAAG
TAAGCGTTTTGACATGCAGATTACGGAAAT
Run BLAST on NCBI

protein sequence of TCONS_00064777-protein

>TCONS_00064777-protein ID=TCONS_00064777-protein|Name=TCONS_00064777-protein|organism=Clytia hemisphaerica|type=polypeptide|length=490bp
MNYKLLTSLVLLAVIITVKSERGCKSGYFCCKSNPLQGYCTYQGYVPGGK
KVMLRPIRAPVANLQMDAVATYGTYLGYAFSATSAQVDVAALAKNFAKYA
EVMSVGLGVFGSVVGIAADKATPTPADIINACNVALEKLTDEVNDQFSNM
KDYVDQQIIQQDKLLMNLNYKQYYSYYTGCLTEITEDDMLDCLKAVNRLS
GSDSAKFLRFFEHKSNPNWNPSVDDVKRMEAIFIIFRDYADLRIMILLSL
SAMYERKQQTTNNKKAAKTYLTELKNDIEEFMDYANFTYTQIYNKHNTHW
DYLTETKKCTTRYQRTIKEGWLVAVHTWDAINCGSRFSEFLQEPERCWHD
GYVRKQGNCPCSGSMEDMYAGKTSTPLCPMVKYGSNADTWASVMTLWNFN
IKRMGPEFRLYREQDLKSLENYWNANIFVNFPVWKNIVQGVEKKLKTVYH
NVQDEPSQDNDAVLKRVESAKRWQFMEEDALHDEMALREY
Run BLAST on NCBI

transcript from alignment at scaffold_423:310591..318172-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064777 ID=TCONS_00064777|Name=TCONS_00064777|organism=Clytia hemisphaerica|type=transcript|length=7582bp|location=Sequence derived from alignment at scaffold_423:310591..318172- (Clytia hemisphaerica)
GTTTCTTTGGCGTAGATTTGAAGCAACTTGAAAAGTTTAGACAGTGAACT
TAAATTACCTAACTTTTTGAAATACGAACGAATTCATGTTGGTATACAAC
ACATTTCATGGTTGTCTTCTTACTGATAAAGGTACTCTCTTTGATGGGAA
ATAAGTGGTTTCATTTCCCATCCAGGACTCTCGCCTTTAGACCTCCGGGC
TTTAAACTCAATGGTGAATACACCCTAAAGATTGATCTTCAGGCATATAA
AACGTCTCTAGTGAATTATCATTTGTATTTATGGCCCTAGGGATACATTC
AAATTCTATACATTATTTTACGATCAATCCAAAACTTTCAACATAAAAAC
ATACATAGCATTTGTCATTTTTCATTAGATAGCTGACGACTTCAGATATG
AATTACAAATTACTTACAAGCCTGGTGCTTCTTGCCGTGATTATTACGGT
CAAAAGTGAACGAGGATGCAAGTCAGGATATTTCTGCTGTAAATCAAATC
CTTTGCAAGGATATTGCACTTATCAAGGATACGTACCAGGAGGAAAGAAA
GTGATGTTGAGACCTATCAGAGCACCTGTAGCTAATTTGCAGAGTAAGTT
CAACACTTTTAACCCATTTAGTTACATCAATATGCCTTCTTACATGTCTT
TAAAAATATAAATAAAAGTAATCACGGAAAAGGACGCGGAAAAAAAAGAC
ATAAGTGTGAGAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
CATACGTTCACTGATTGCGCAATTTTCATATTGACATTTTCGAGGCATTT
TGATGTAACTGCCATTATCTGTCACTGGCATCATATGAGTTAAACCGATT
TGGTTGGACCTAGAAACATCGAGACCCATACACGTCTTTCCAATAATAAC
AAACTATATAAGAACATAAGGCTTCGATGGCCAAATGCTAAGAACAAGCT
AAGAACATTTTATTTTATAGCTTCGCGGACTCAAAAACACCCAATTTATT
AGGAAAATGGGCAAAAATACTCAAAAAATGGTGAGAATAAGAACATGTTA
AGAACAAAAGTTAAGAACATCTGAAGCGGCGTCAAAAATTTTGGATGTAT
GGATTTTGGAAGGGTTAGGTCCCTTCGATGTATTTTGTATCGATCGCCAT
TAGAGTATGATTCCTTCTCGTGTATTCCCTTTTGTTTAACTTGGCAACTT
GCTGCTGGTATATATCCTCGTCAAAGCTTTTGAATCTCACACACTTTGTC
TTTAAATATATTTTCGGCGGTTAAAGCAGTTTGCTTGTGCTTCATTCAGG
ACACATTGTTTCTTCAGACAAAGAATGGGACATTTCAATGAGACATTTTA
ATGATTTCAATTTAAGATTCTTTGAGTGACAATTTTATTTTGCAAATCTG
TGAACGTGGAATGGAAAAGATTTTACAGTACGATTTTTAACGTTTTCTCT
GTACCTTGCACCACTTTAATGAAAATCCCTGTTACTTTTTAGTGGATGCA
GTTGCAACATATGGTACATATCTTGGTTATGCTTTCAGCGCTACAAGTGC
TCAGGTTGACGTAGCAGCTCTGGCAAAGAACTTCGCAAAATATGCTGAGG
TAATTATACTAAAACGATGTGTGTGTGTCTGGGAAAAAAGTGGAACAGAC
TTTGCATACGTTATCGGCCAAAACTTAGTCGGCCTCAATTTTAGTCGGCC
TTAATTATTAGTCGGCCCTAATTTTAGTCACCTCGTCAAAATTTAGTCAC
TAAGGGCCGACAAATAATTAAGACCGACTAAAAATTTGGGCCATTTTTAA
ATTTACAAGCAGATGGAAAATAGGAGAAAGCTTAAAATACTGGGCCCGGT
TGTTCAAAAGTGGATTAGCGGCCGATTAGCTTAAGTCCGGATTAAATAGC
GATTAGCGCCGATTAACGAAAATTTGTCTGTTGTTCAAAAAATATCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTATATGGAAATTTGCAAAGAAGACGTCCAAGAACATACAGA
CTGAAAGATTTTATGCATAACAACACTTTTTCAGATGAGGACATTCGGAT
GCGCTTTCGATGCCAAAAGAGAGCTAGAAGTTCAGTCGAAAGAAGCTTTG
GTTTGTTAAAAGCACGATTTCCTGCATTACGATTTGGTTTGAGAGTCGAC
CCTATAAAAGCATGTCAAATAATTGGTACATGCTTTATCCTTCATAACAT
TGCTATTATGTTAAATGAAGACCCATTTGACGATGAAGAAGACCCAGACG
ACTTTGAGGCAGAACCTTATGATGGAGACGATCAAAATCGTGGTGCAATA
CGCGATCATATTGCAAATACATTCTTTTAAAAAACATGTTCAAATACATA
AGATCTTTATCAAAAATATTATCAATTTACATTTTACAAACGACACAACA
CACCACCGACCACACACAGTCATTCAAACTTTCTAATATTATTTGTTTAC
AAAATTGTTTGTTTTGGTTTCGCAGGGAACGTTCGAAAATTGAAAAATGA
CGTCACGGAACATTCGAAAAGGGTTTTCCCAGAGTTTTCCCACGCGATTA
CTTAATCTGACGTTCGAACAACGGAAGTTAATCCCTGCGATTAACTAATC
GAAATTTAATCGCGATTAGCGTTAATCGGGATTTAATCTAATCGATTTTT
TGAACAACCGGGCCCTGGAAAATAAGGAAAGCTTAATTATAACCTTTAAT
TTGGCCCAAATTTTTAGTCGGCCCAAATTTTAGTCGGCCCAAATTTTAGT
CGGCCCAAAATTTTAGTCAGCCCCAATTTTAGTCACCAAGCCAAAATTTA
GTCACTTAGGGCCGAATAAGTTTTGGCCAATAAGATAAATAAAAATCCTC
ATAATCATTTATATAGAGTTTAGAATAATAAAATGGAGATTTTTTGCTCA
GTCAATTTTCATCAAAGGCAATGAAACCATACTATCTTGAATTAAAAATT
GGGAAGTTATTTTATCACATGTAGAGTGTCGGAAAAAAATGATTGTATGA
AAGATTTTACAGGGTGTCCAGAAAAAAAGTGTATTTATTAAATTTTGAGT
TTTAAAACTCACATGAAAATTTTGAGGATTGTTATAAAATGTAATGTTGA
ATATACAGATACTGAATTTGCTTGTTAGGTGATGTCAGTAGGTCTTGGCG
TCTTCGGATCAGTTGTTGGAATCGCGGCAGATAAAGCTACACCCACACCA
GCAGATATAATTAATGCTTGTAACGTTGCTCTTGAAAAATTGACAGATGA
AGTTAATGATCAATTCTCTAACATGAAAGATTATGTTGACCAACAGATCA
TCCAGCAAGACAAACTCCTCATGAACCTCAACTACAAACAGTATTACAGC
TACTATACTGGATGCTTGACGGAGATAACTGAAGATGACATGCTGGATTG
TTTGAAAGCAGTCAATCGTTTATCCGGTAGTGACTCAGCCAAATTCCTTC
GTTTCTTCGAACATAAATCGAATCCCAATTGGAATCCATCAGTCGATGAC
GTCAAACGCATGGAAGCTATTTTCATCATTTTCAGAGATTACGCCGATCT
CCGAATCATGATTTTACTTTCTCTTAGTGCCATGTACGAGCGCAAGCAGC
AAACTACGAACAATAAAAAAGCAGCTAAAACCTACCTGACTGAATTGAAG
AATGACATTGAAGAATTCATGGATTATGCCAACTTTACTTACACCCAAAT
CTATAACAAACATAACACACATTGGGACTACTTAACAGAAACCAAAAAAT
GTACCACACGATATCAACGAACAATTAAAGAAGGATGGTTGGTTGCGGTT
CATACCTGGGATGCAATAAATTGCGGATCTCGATTTTCGGAATTTCTTCA
GGAACCTGAAAGATGCTGGCATGATGGTTACGTGAGGTAAATATAGATTT
TGTGTTAAAGAACAAAAGTGATACAAGCTTTTTCTATGAGAACATTCAAA
ATTTTTTAAGCCTTCGGATGTTCATAACTGTTTGAGTTTTAAGCCTAAAA
NTTATGAGAACATCCAAAAATTTTTAAGCCTTCGGATGTTCATAACTGTT
TGAGTTTTAAGCCTAAAAATGTTCTTAACATGTTCTTAATTTCACCATTT
TGTGAGTATTTTGGTCTATTTTCCTAAGAAATTAGGTGTTTTAGCGTCCA
CCAAGCCTTAAAATATTCTTAACTTGTTCTTAATATTTTGGCCATCAAAG
CCTTATGTTTTTATATAGTTTGTTCTTAAAACGTGTAACAAATATAACTG
ATAAGATTTAGGCTTTTCTTTTGGCTTAGGCTCGGTTTCTTATTCATTTT
TGGTATTTCAATTCAGTTTCAGTACGAAGAAAAGTCAGTTAAGTTAAAGA
TAAGGTACACGTTTTTTTTTTTTTAAGAAACACACTTTTAAGAAACATGA
GGCTCAGAATGTCTAAAAACTAAGAAACATCTAAGAAACATGCTGAGGCT
GAGAATGAGAAAATAACATTTTTTAATTCGGTTTTTTTAAGAACCTTCCA
ATCCAGCCTTTCATATGGCTGATTATGTCAAAAAGTTTAGAAACATGCAA
GAAATATTTAAGGCTCAAAGGGCCGATTTCTTAAGAAACATTGAGGCTGC
TTGGTAAAACTAGTTTCTTAAAAAAAAAAAACGTGTAGCTTTGCTTCATC
GCCAAAGAAGCTTCGTCCAGTGTCCTAAATAAGATATCAATGACAACTAT
GTACGTGTCAATTAAAGTATATGTTGTGAGAATTCTCTCTTCTTAACTTT
TCCAGGAAGCAAGGTAACTGTCCATGTAGTGGATCAATGGAAGACATGTA
CGCAGGGAAAACAAGCACACCTTTATGTCCAATGGTAAAATACGGATCAA
ATGCAGATACATGGGCCTCCGTAATGACTTTATGGAATTTTAACATCAAG
GTATATAAACAATAATGTCATACGGGATAGATAAAAATCGGTCACAGAGC
TGTAATAACCAATAACTGAATTAGAAATTTAAAAAAATATGGCAGTCAAC
ATTGTGGATTTAATTCAAAATTTAAATTTAACACAAACGATGATTTTTTA
CTAAGCAACAACAGTGTCTACTCTGATTTCAGGCTCGCGTTATGCTTTTG
CATTATATTTGCTCTTAAACAAAAGAGCCATTGTTTAGGTACCAAAAATG
AACCTACTTATGCTTATAAACGTTATACTTATAGAAAAACATGTACTCTT
TGAATCTTGCTTACGTATATTGTAAATTTGCTTCTAAAAAGTGTGAATAA
AATATTATTCCACTCCTCGGAGGTTGTCCCTTGAAGGTTTTTGTGAAAGG
TAATACCTTAAGGGAAGAAATTTTGGCGGAAAGAAATTTAAATTTATAGG
TCATTCGCCAAAATAAATTCTCGCCAAATTTATAAATTTTATCAAATCGC
CAAAATAAATTCCGCCAAATTGCACCAAAATTGGCGAGCGGGCTCATTCG
CCAATATTTCTTCTCTTAAGGTAGTCTATTCTTTAGAGGTTCTCCTGGAA
AATGAGTGGAAGGTTACCCGTCTGAAGTTTTAAAACATTTCTTCTTTTTT
TTCTTCAGAGAATGGGTCCAGAATTTCGTTTATACCGGGAGCAAGATTTA
AAATCATTGGAGAATTATTGGAACGCCAATATTTTCGTGAACTTCCCAGT
ATGGAAGAATATAGTACAAGGTGTGGAAAAGAAGTTGAAAACGGTTTATC
ATAATGTTCAAGATGAGCCATCTCAGGATAATGATGCTGTTCTTAAGCGT
GTTGAGTCAGCCAAACGTTGGCAGTTTATGGAAGAAGATGCTTTACATGA
TGAGATGGCGCTTAGAGAATATTAATCTCAAAGAGAAGAATTTACCAAGA
GAAAACATACTTAATGTTATAAGAAAGGATTCCCAGTGACATGAAATTAA
TACTGAATTTTTCCGATTTCTTTATGAAAAGTTGANAGTGTCATGAAATT
AATACTGAATTTTTCCGATTTCTTTATGAAAAGTTGACTAGGGAATAAAT
TTTACAAACATTTGTATCACCCCCAATTTACTCGGGAAACTAATTAAAGC
ACGTTAAGTCATTATATTTGTTCTCACGATTTTCGAGTTTGGTTCTGAAT
TTTCATTTCTTTATTCCTATATTATAAAAGATTTATTTTCAATGTATCCT
AGTAGTAGTAAGATCTTAGAAACTATTTATCTTGTAACAGTAGCGTGCGG
CCACCTCCTTAGTTTAGCCTTCATGTCTATGAGTGTGGTCGCTCGTCTCG
CTTATTAAGGCAAATATATTCATTACTTACTTACGTCCAAATTTACCTTA
ATTTTTTAGGACCCTTAGCTTAGCACCCGCTAAATAAAACATCAACTCAA
AGTAAGCGTTTTGACATGCAGATTACGGAAAT

Coding sequence (CDS) from alignment at scaffold_423:310591..318172-

>TCONS_00064777 ID=TCONS_00064777|Name=TCONS_00064777|organism=Clytia hemisphaerica|type=CDS|length=7365bp|location=Sequence derived from alignment at scaffold_423:310591..318172- (Clytia hemisphaerica)
AGAATGGGTCCAGAATTTCGTTTATACCGGGAGCAAGATTTAAAATCATT
GGAGAATTATTGGAACGCCAATATTTTCGTGAACTTCCCAGTATGGAAGA
ATATAGTACAAGGTGTGGAAAAGAAGTTGAAAACGGTTTATCATAATGTT
CAAGATGAGCCATCTCAGGATAATGATGCTGTTCTTAAGCGTGTTGAGTC
AGCCAAACGTTGGCAGTTTATGGAAGAAGATGCTTTACATGATGAGATGG
CGCTTAGAGAATATTAAGAAGCAAGGTAACTGTCCATGTAGTGGATCAAT
GGAAGACATGTACGCAGGGAAAACAAGCACACCTTTATGTCCAATGGTAA
AATACGGATCAAATGCAGATACATGGGCCTCCGTAATGACTTTATGGAAT
TTTAACATCAAGGTGATGTCAGTAGGTCTTGGCGTCTTCGGATCAGTTGT
TGGAATCGCGGCAGATAAAGCTACACCCACACCAGCAGATATAATTAATG
CTTGTAACGTTGCTCTTGAAAAATTGACAGATGAAGTTAATGATCAATTC
TCTAACATGAAAGATTATGTTGACCAACAGATCATCCAGCAAGACAAACT
CCTCATGAACCTCAACTACAAACAGTATTACAGCTACTATACTGGATGCT
TGACGGAGATAACTGAAGATGACATGCTGGATTGTTTGAAAGCAGTCAAT
CGTTTATCCGGTAGTGACTCAGCCAAATTCCTTCGTTTCTTCGAACATAA
ATCGAATCCCAATTGGAATCCATCAGTCGATGACGTCAAACGCATGGAAG
CTATTTTCATCATTTTCAGAGATTACGCCGATCTCCGAATCATGATTTTA
CTTTCTCTTAGTGCCATGTACGAGCGCAAGCAGCAAACTACGAACAATAA
AAAAGCAGCTAAAACCTACCTGACTGAATTGAAGAATGACATTGAAGAAT
TCATGGATTATGCCAACTTTACTTACACCCAAATCTATAACAAACATAAC
ACACATTGGGACTACTTAACAGAAACCAAAAAATGTACCACACGATATCA
ACGAACAATTAAAGAAGGATGGTTGGTTGCGGTTCATACCTGGGATGCAA
TAAATTGCGGATCTCGATTTTCGGAATTTCTTCAGGAACCTGAAAGATGC
TGGCATGATGGTTACGTGAGTGGATGCAGTTGCAACATATGGTACATATC
TTGGTTATGCTTTCAGCGCTACAAGTGCTCAGGTTGACGTAGCAGCTCTG
GCAAAGAACTTCGCAAAATATGCTGAGATGAATTACAAATTACTTACAAG
CCTGGTGCTTCTTGCCGTGATTATTACGGTCAAAAGTGAACGAGGATGCA
AGTCAGGATATTTCTGCTGTAAATCAAATCCTTTGCAAGGATATTGCACT
TATCAAGGATACGTACCAGGAGGAAAGAAAGTGATGTTGAGACCTATCAG
AGCACCTGTAGCTAATTTGCAGAAGAATGGGTCCAGAATTTCGTTTATAC
CGGGAGCAAGATTTAAAATCATTGGAGAATTATTGGAACGCCAATATTTT
CGTGAACTTCCCAGTATGGAAGAATATAGTACAAGGTGTGGAAAAGAAGT
TGAAAACGGTTTATCATAATGTTCAAGATGAGCCATCTCAGGATAATGAT
GCTGTTCTTAAGCGTGTTGAGTCAGCCAAACGTTGGCAGTTTATGGAAGA
AGATGCTTTACATGATGAGATGGCGCTTAGAGAATATTAAGAAGCAAGGT
AACTGTCCATGTAGTGGATCAATGGAAGACATGTACGCAGGGAAAACAAG
CACACCTTTATGTCCAATGGTAAAATACGGATCAAATGCAGATACATGGG
CCTCCGTAATGACTTTATGGAATTTTAACATCAAGGTGATGTCAGTAGGT
CTTGGCGTCTTCGGATCAGTTGTTGGAATCGCGGCAGATAAAGCTACACC
CACACCAGCAGATATAATTAATGCTTGTAACGTTGCTCTTGAAAAATTGA
CAGATGAAGTTAATGATCAATTCTCTAACATGAAAGATTATGTTGACCAA
CAGATCATCCAGCAAGACAAACTCCTCATGAACCTCAACTACAAACAGTA
TTACAGCTACTATACTGGATGCTTGACGGAGATAACTGAAGATGACATGC
TGGATTGTTTGAAAGCAGTCAATCGTTTATCCGGTAGTGACTCAGCCAAA
TTCCTTCGTTTCTTCGAACATAAATCGAATCCCAATTGGAATCCATCAGT
CGATGACGTCAAACGCATGGAAGCTATTTTCATCATTTTCAGAGATTACG
CCGATCTCCGAATCATGATTTTACTTTCTCTTAGTGCCATGTACGAGCGC
AAGCAGCAAACTACGAACAATAAAAAAGCAGCTAAAACCTACCTGACTGA
ATTGAAGAATGACATTGAAGAATTCATGGATTATGCCAACTTTACTTACA
CCCAAATCTATAACAAACATAACACACATTGGGACTACTTAACAGAAACC
AAAAAATGTACCACACGATATCAACGAACAATTAAAGAAGGATGGTTGGT
TGCGGTTCATACCTGGGATGCAATAAATTGCGGATCTCGATTTTCGGAAT
TTCTTCAGGAACCTGAAAGATGCTGGCATGATGGTTACGTGAGTGGATGC
AGTTGCAACATATGGTACATATCTTGGTTATGCTTTCAGCGCTACAAGTG
CTCAGGTTGACGTAGCAGCTCTGGCAAAGAACTTCGCAAAATATGCTGAG
ATGAATTACAAATTACTTACAAGCCTGGTGCTTCTTGCCGTGATTATTAC
GGTCAAAAGTGAACGAGGATGCAAGTCAGGATATTTCTGCTGTAAATCAA
ATCCTTTGCAAGGATATTGCACTTATCAAGGATACGTACCAGGAGGAAAG
AAAGTGATGTTGAGACCTATCAGAGCACCTGTAGCTAATTTGCAGAAGAA
TGGGTCCAGAATTTCGTTTATACCGGGAGCAAGATTTAAAATCATTGGAG
AATTATTGGAACGCCAATATTTTCGTGAACTTCCCAGTATGGAAGAATAT
AGTACAAGGTGTGGAAAAGAAGTTGAAAACGGTTTATCATAATGTTCAAG
ATGAGCCATCTCAGGATAATGATGCTGTTCTTAAGCGTGTTGAGTCAGCC
AAACGTTGGCAGTTTATGGAAGAAGATGCTTTACATGATGAGATGGCGCT
TAGAGAATATTAAGAAGCAAGGTAACTGTCCATGTAGTGGATCAATGGAA
GACATGTACGCAGGGAAAACAAGCACACCTTTATGTCCAATGGTAAAATA
CGGATCAAATGCAGATACATGGGCCTCCGTAATGACTTTATGGAATTTTA
ACATCAAGGTGATGTCAGTAGGTCTTGGCGTCTTCGGATCAGTTGTTGGA
ATCGCGGCAGATAAAGCTACACCCACACCAGCAGATATAATTAATGCTTG
TAACGTTGCTCTTGAAAAATTGACAGATGAAGTTAATGATCAATTCTCTA
ACATGAAAGATTATGTTGACCAACAGATCATCCAGCAAGACAAACTCCTC
ATGAACCTCAACTACAAACAGTATTACAGCTACTATACTGGATGCTTGAC
GGAGATAACTGAAGATGACATGCTGGATTGTTTGAAAGCAGTCAATCGTT
TATCCGGTAGTGACTCAGCCAAATTCCTTCGTTTCTTCGAACATAAATCG
AATCCCAATTGGAATCCATCAGTCGATGACGTCAAACGCATGGAAGCTAT
TTTCATCATTTTCAGAGATTACGCCGATCTCCGAATCATGATTTTACTTT
CTCTTAGTGCCATGTACGAGCGCAAGCAGCAAACTACGAACAATAAAAAA
GCAGCTAAAACCTACCTGACTGAATTGAAGAATGACATTGAAGAATTCAT
GGATTATGCCAACTTTACTTACACCCAAATCTATAACAAACATAACACAC
ATTGGGACTACTTAACAGAAACCAAAAAATGTACCACACGATATCAACGA
ACAATTAAAGAAGGATGGTTGGTTGCGGTTCATACCTGGGATGCAATAAA
TTGCGGATCTCGATTTTCGGAATTTCTTCAGGAACCTGAAAGATGCTGGC
ATGATGGTTACGTGAGTGGATGCAGTTGCAACATATGGTACATATCTTGG
TTATGCTTTCAGCGCTACAAGTGCTCAGGTTGACGTAGCAGCTCTGGCAA
AGAACTTCGCAAAATATGCTGAGATGAATTACAAATTACTTACAAGCCTG
GTGCTTCTTGCCGTGATTATTACGGTCAAAAGTGAACGAGGATGCAAGTC
AGGATATTTCTGCTGTAAATCAAATCCTTTGCAAGGATATTGCACTTATC
AAGGATACGTACCAGGAGGAAAGAAAGTGATGTTGAGACCTATCAGAGCA
CCTGTAGCTAATTTGCAGAAGAATGGGTCCAGAATTTCGTTTATACCGGG
AGCAAGATTTAAAATCATTGGAGAATTATTGGAACGCCAATATTTTCGTG
AACTTCCCAGTATGGAAGAATATAGTACAAGGTGTGGAAAAGAAGTTGAA
AACGGTTTATCATAATGTTCAAGATGAGCCATCTCAGGATAATGATGCTG
TTCTTAAGCGTGTTGAGTCAGCCAAACGTTGGCAGTTTATGGAAGAAGAT
GCTTTACATGATGAGATGGCGCTTAGAGAATATTAAGAAGCAAGGTAACT
GTCCATGTAGTGGATCAATGGAAGACATGTACGCAGGGAAAACAAGCACA
CCTTTATGTCCAATGGTAAAATACGGATCAAATGCAGATACATGGGCCTC
CGTAATGACTTTATGGAATTTTAACATCAAGGTGATGTCAGTAGGTCTTG
GCGTCTTCGGATCAGTTGTTGGAATCGCGGCAGATAAAGCTACACCCACA
CCAGCAGATATAATTAATGCTTGTAACGTTGCTCTTGAAAAATTGACAGA
TGAAGTTAATGATCAATTCTCTAACATGAAAGATTATGTTGACCAACAGA
TCATCCAGCAAGACAAACTCCTCATGAACCTCAACTACAAACAGTATTAC
AGCTACTATACTGGATGCTTGACGGAGATAACTGAAGATGACATGCTGGA
TTGTTTGAAAGCAGTCAATCGTTTATCCGGTAGTGACTCAGCCAAATTCC
TTCGTTTCTTCGAACATAAATCGAATCCCAATTGGAATCCATCAGTCGAT
GACGTCAAACGCATGGAAGCTATTTTCATCATTTTCAGAGATTACGCCGA
TCTCCGAATCATGATTTTACTTTCTCTTAGTGCCATGTACGAGCGCAAGC
AGCAAACTACGAACAATAAAAAAGCAGCTAAAACCTACCTGACTGAATTG
AAGAATGACATTGAAGAATTCATGGATTATGCCAACTTTACTTACACCCA
AATCTATAACAAACATAACACACATTGGGACTACTTAACAGAAACCAAAA
AATGTACCACACGATATCAACGAACAATTAAAGAAGGATGGTTGGTTGCG
GTTCATACCTGGGATGCAATAAATTGCGGATCTCGATTTTCGGAATTTCT
TCAGGAACCTGAAAGATGCTGGCATGATGGTTACGTGAGTGGATGCAGTT
GCAACATATGGTACATATCTTGGTTATGCTTTCAGCGCTACAAGTGCTCA
GGTTGACGTAGCAGCTCTGGCAAAGAACTTCGCAAAATATGCTGAGATGA
ATTACAAATTACTTACAAGCCTGGTGCTTCTTGCCGTGATTATTACGGTC
AAAAGTGAACGAGGATGCAAGTCAGGATATTTCTGCTGTAAATCAAATCC
TTTGCAAGGATATTGCACTTATCAAGGATACGTACCAGGAGGAAAGAAAG
TGATGTTGAGACCTATCAGAGCACCTGTAGCTAATTTGCAGAAGAATGGG
TCCAGAATTTCGTTTATACCGGGAGCAAGATTTAAAATCATTGGAGAATT
ATTGGAACGCCAATATTTTCGTGAACTTCCCAGTATGGAAGAATATAGTA
CAAGGTGTGGAAAAGAAGTTGAAAACGGTTTATCATAATGTTCAAGATGA
GCCATCTCAGGATAATGATGCTGTTCTTAAGCGTGTTGAGTCAGCCAAAC
GTTGGCAGTTTATGGAAGAAGATGCTTTACATGATGAGATGGCGCTTAGA
GAATATTAAGAAGCAAGGTAACTGTCCATGTAGTGGATCAATGGAAGACA
TGTACGCAGGGAAAACAAGCACACCTTTATGTCCAATGGTAAAATACGGA
TCAAATGCAGATACATGGGCCTCCGTAATGACTTTATGGAATTTTAACAT
CAAGGTGATGTCAGTAGGTCTTGGCGTCTTCGGATCAGTTGTTGGAATCG
CGGCAGATAAAGCTACACCCACACCAGCAGATATAATTAATGCTTGTAAC
GTTGCTCTTGAAAAATTGACAGATGAAGTTAATGATCAATTCTCTAACAT
GAAAGATTATGTTGACCAACAGATCATCCAGCAAGACAAACTCCTCATGA
ACCTCAACTACAAACAGTATTACAGCTACTATACTGGATGCTTGACGGAG
ATAACTGAAGATGACATGCTGGATTGTTTGAAAGCAGTCAATCGTTTATC
CGGTAGTGACTCAGCCAAATTCCTTCGTTTCTTCGAACATAAATCGAATC
CCAATTGGAATCCATCAGTCGATGACGTCAAACGCATGGAAGCTATTTTC
ATCATTTTCAGAGATTACGCCGATCTCCGAATCATGATTTTACTTTCTCT
TAGTGCCATGTACGAGCGCAAGCAGCAAACTACGAACAATAAAAAAGCAG
CTAAAACCTACCTGACTGAATTGAAGAATGACATTGAAGAATTCATGGAT
TATGCCAACTTTACTTACACCCAAATCTATAACAAACATAACACACATTG
GGACTACTTAACAGAAACCAAAAAATGTACCACACGATATCAACGAACAA
TTAAAGAAGGATGGTTGGTTGCGGTTCATACCTGGGATGCAATAAATTGC
GGATCTCGATTTTCGGAATTTCTTCAGGAACCTGAAAGATGCTGGCATGA
TGGTTACGTGAGTGGATGCAGTTGCAACATATGGTACATATCTTGGTTAT
GCTTTCAGCGCTACAAGTGCTCAGGTTGACGTAGCAGCTCTGGCAAAGAA
CTTCGCAAAATATGCTGAGATGAATTACAAATTACTTACAAGCCTGGTGC
TTCTTGCCGTGATTATTACGGTCAAAAGTGAACGAGGATGCAAGTCAGGA
TATTTCTGCTGTAAATCAAATCCTTTGCAAGGATATTGCACTTATCAAGG
ATACGTACCAGGAGGAAAGAAAGTGATGTTGAGACCTATCAGAGCACCTG
TAGCTAATTTGCAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040620XLOC_040620Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064777-exon-scaffold_423-1575043694:318042..318172TCONS_00064777-exon-scaffold_423-1575043694:318042..318172Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1575043694:317580..317794TCONS_00064777-exon-scaffold_423-1575043694:317580..317794Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1575043694:315624..315730TCONS_00064777-exon-scaffold_423-1575043694:315624..315730Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1575043694:313087..313844TCONS_00064777-exon-scaffold_423-1575043694:313087..313844Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1575043694:312073..312217TCONS_00064777-exon-scaffold_423-1575043694:312073..312217Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1575043694:310591..311414TCONS_00064777-exon-scaffold_423-1575043694:310591..311414Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1510915933:318042..318172TCONS_00064777-exon-scaffold_423-1510915933:318042..318172Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1510915933:317580..317794TCONS_00064777-exon-scaffold_423-1510915933:317580..317794Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1510915933:315624..315730TCONS_00064777-exon-scaffold_423-1510915933:315624..315730Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1510915933:313087..313844TCONS_00064777-exon-scaffold_423-1510915933:313087..313844Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1510915933:312073..312217TCONS_00064777-exon-scaffold_423-1510915933:312073..312217Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1510915933:310591..311414TCONS_00064777-exon-scaffold_423-1510915933:310591..311414Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1491911889:318042..318172TCONS_00064777-exon-scaffold_423-1491911889:318042..318172Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1491911889:317580..317794TCONS_00064777-exon-scaffold_423-1491911889:317580..317794Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1491911889:315624..315730TCONS_00064777-exon-scaffold_423-1491911889:315624..315730Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1491911889:313087..313844TCONS_00064777-exon-scaffold_423-1491911889:313087..313844Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1491911889:312073..312217TCONS_00064777-exon-scaffold_423-1491911889:312073..312217Clytia hemisphaericaexon
TCONS_00064777-exon-scaffold_423-1491911889:310591..311414TCONS_00064777-exon-scaffold_423-1491911889:310591..311414Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064777-proteinTCONS_00064777-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_423supercontigscaffold_423:310591..318172 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
203.667	218.319	48.8297	28.9304	1.38021	1.26598	2.47616	2.66479	20.3556	10.0517	20.3152	17.0096	1.507	1.11643	6.3157	6.16399	2.78356	1.20493	0.26788	0.594652	112.965	101.559	106.472	104.379	35.6558	14.5915	4.26988	5.81884	48.8869	51.3554
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064777 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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