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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064773 ID=TCONS_00064773|Name=TCONS_00064773|organism=Clytia hemisphaerica|type=transcript|length=1997bp
CCTTTTTTGCCAAATAAGCTCAATTTTGAAGGCCGATAAAGTAGTATAAC
AACTTATCTTTCAATGTAGGATCTGCAGTAGAACAATCGCAGAGACCAAG
AAGATATAGTATTTTACTGTGTAAGATCATATTGTATGTATGACTATATT
ATATTTCTCaccaaaaaatgtttattgtGATAGCTTGATAAGTAAATCCC
TaaggaaaactttttattttcagttggctTTAACCCCTCCTTTATTCCTC
AGGTTGCAATACTATTCATATGGATAGGTTGGCAAATTTGCTATGATACT
AAACTAATATATTCAATTCCAAGAGGAAAGAATATTTTATAACATGTTAT
TTTTACTTCACAGTATGAGAAGATACAACTATTTTTACGGAAGTTatgaa
aagtgacgaatttttcgtAATTAATGACAACGGAAAGTCATTAAAGCTGT
TAATTAGACAACTTTGTATGGAAATTACCTAATCAAACCAATATCTTCTT
CTTCACTGAAACGAAGAGCATCGTAAAGTGAGAGCTAAAACAGTTTGACA
TTATGGTTGTTGGtgaaatgattgagaaatttcGGAAAACATCTATCGAG
AAGATTCGGAAGACATCAGTAGAGAAACTGGAACGACTTCGGAAGACTTC
GCGCGGACGAAGTAACCGCCGTACATCACGAGGAGAGTCATGTTCATGTA
TTGAATATNCTAATATATTCAATTCCAAGAGGAAAGAATATTTTATAACA
TGTTATTTTTACTTCACAGTATGAGAAGATACAACTATTTTTACGGAAGT
TatgaaaagtgacgaatttttcgtAATTAATGACAACGGAAAGTCATTAA
AGCTGTTAATTAGACAACTTTGTATGGAAATTACCTAATCAAACCAATAT
CTTCTTCTTCACTGAAACGAAGAGCATCGTAAAGTGAGAGCTAAAACAGT
TTGAAATTATGGTTGTTGGtgaaatgattgagaaatttcGGAAAACATCT
ATCGAGAAGATTCGGAAGACATCAGTAGAGAAACTGGAACGACTTCGGAA
GACTTCGCGCGGACGAAGTAACCGCCGTACATCACGAGGAGAGTCATGTT
CATGTATTGAATATCGTGGGACGTTCAAGTTGATGGTGCTTGGAGATCAA
GGTGTGGGGAAAAGTTCAATTTGTGCCAAATACACCTCAGTGGATGAAGA
AATATTACAAGCATTTGATGAAGAGAGTGGAGAGAGGCAGCCCCGCGACG
AACTCTTTACAAGCTGTATTTATTTGAGTTCTGTTAACAGGAAAATTAAG
CAATACGATTTGGAAATCGCTATTCCGAATGGAGTTTATTGGAATGGAAC
AGTCAACGGATACAAAGAAAGAATCAGTCAGACGAACGGCTTCATGTTGG
TTTACTCAAAAGAAAATCGGCAAAGTTACATGAGGCTAATCGAACTTTTA
TCAGAcattagaaaaatcaaaaagatggCCGAGCTTCCAATCATCATTGT
TGGTAATAAATCAGACTTGAATGATATTAAAACATTGCAAGTGAAAGATT
GTGAGCATATAGTTTTGGGTGAATATCCACACTTTGATGTATCTGCAATG
CAAAATGAAGGTATCCAAGAAGCTTTCAAACAACTTTCAGTCAACTGTTC
GCACGTgtttgatgaagatgaagaaactATTGAAGAGACTGGGGAAGAGA
ATGTCAAAGAAATAGACTGATCAAATTGATCGTCGGTTGccgtaaaaaaa
ttaatcgactGGACGCTTAAAAAGAAAGCATTACAAAGTCAAAGTAACAT
TTTTGTCTGAGCCCTGAAAAATTTATGGATTGTCGGAGAGGGAATGCAAC
AGTTTCTATTTTTAATTGTCGATATTGAATAAATAATTAATAGttgtagc
acttttctacaagatcttcatttttttcttcttcattttcatcttcattt
ttagaattttttaaaagatatttttatttcaaattgttccacttcac Run BLAST on NCBI protein sequence of TCONS_00064773-protein >TCONS_00064773-protein ID=TCONS_00064773-protein|Name=TCONS_00064773-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MVVGEMIEKFRKTSIEKIRKTSVEKLERLRKTSRGRSNRRTSRGESCSCI
EYRGTFKLMVLGDQGVGKSSICAKYTSVDEEILQAFDEESGERQPRDELF
TSCIYLSSVNRKIKQYDLEIAIPNGVYWNGTVNGYKERISQTNGFMLVYS
KENRQSYMRLIELLSDIRKIKKMAELPIIIVGNKSDLNDIKTLQVKDCEH
IVLGEYPHFDVSAMQNEGIQEAFKQLSVNCSHVFDEDEETIEETGEENVK
EID Run BLAST on NCBI transcript from alignment at scaffold_423:195376..198567- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064773 ID=TCONS_00064773|Name=TCONS_00064773|organism=Clytia hemisphaerica|type=transcript|length=3192bp|location=Sequence derived from alignment at scaffold_423:195376..198567- (Clytia hemisphaerica)
CCTTTTTTGCCAAATAAGCTCAATTTTGAAGGCCGATAAAGTAGTATAAC
AACTTATCTTTCAATGTAGGATCTGCAGTAGAACAATCGCAGAGACCAAG
AAGATATAGTATTTTACTGTGTAAGATCATATTGTATGTATGACTATATT
ATATTTCTCACCAAAAAATGTTTATTGTGATAGCTTGATAAGTAAATCCC
TAAGGAAAACTTTTTATTTTCAGTTGGCTTTAACCCCTCCTTTATTCCTC
AGGTTGCAATACTATTCATATGGATAGGTTGGCAAATTTGCTATGATACT
AAACTAATATATTCAATTCCAAGAGGAAAGAATATTTTATAACATGTTAT
TTTTACTTCACAGTATGAGAAGATACAACTATTTTTACGGAAGTTATGAA
AAGTGACGAATTTTTCGTAATTAATGACAACGGAAAGTCATTAAAGCTGT
TAATTAGACAACTTTGTATGGAAATTACCTAATCAAACCAATATCTTCTT
CTTCACTGAAACGAAGAGCATCGTAAAGTGAGGTTTGTAGTTAATTCTTT
TTTCTAACCTTGTCAAATGGCGTTTTAAGCTGCATAAACAAAAATTGGAT
GGATATCAATTTTTCATGATACAATCTGTTTCTCGTTTTTGAAGTTCAAA
ATAACTCCTCTAGATTTGAAATTTCACTAAGGAAAATTAAGCTTATTGTC
AGAAACTCTTGATTTGTCGACTTGTATTTGAAAGCAGGATGTAAACTATC
ACAAACTATGATGTCATTTTTGACCACTTGTCTCTGTTTATTTTTCNATG
TAATAAGCATAAACTATGCCTGGATGCTTTGAGAACTTAAGCATACACGA
GCCTGACCAAGGGGCATACACTTGCTTATAAAAAAAAAACATGTAGATTT
GAAATTTCACTAAGGAAAATGAAGCTTATTGTCAGAAACTCTTGATTTGT
CGACTTGTATTTGAAAGCAGGATGTAAACTATCACAAGCTATGATGTCAT
TTTTGACCACTTGTCTCTGTTTATTTTTCCACTATCAATCCAATGCCAAG
TAAAATAGTCTCATCTCACATAAGTTTTTTTCTTGCTCTACTGATTTGTG
TGATGTGGTGATCATCTAATGAAGTGATAACTCATTTTTGGACTCTGTCT
TTTAGTTTTGTAAAGTCTATTCTCTGTGTTTTCATTTTAATAGTTGAAGG
CTTCACACTTCTTGACTATAAATTACATTTTTATATTGCTCTCTAGAGCT
AAAACAGTTTGACATTATGGTTGTTGGTGAAATGATTGAGAAATTTCGGA
AAACATCTATCGAGAAGATTCGGAAGACATCAGTAGAGAAACTGGAACGA
CTTCGGAAGACTTCGCGCGGACGAAGTAACCGCCGTACATCACGAGGAGA
GTCATGTTCATGTATTGAATATNCTAATATATTCAATTCCAAGAGGAAAG
AATATTTTATAACATGTTATTTTTACTTCACAGTATGAGAAGATACAACT
ATTTTTACGGAAGTTATGAAAAGTGACGAATTTTTCGTAATTAATGACAA
CGGAAAGTCATTAAAGCTGTTAATTAGACAACTTTGTATGGAAATTACCT
AATCAAACCAATATCTTCTTCTTCACTGAAACGAAGAGCATCGTAAAGTG
AGGTTTGTAGTTAATTCTTTTTTCTAACCTTGTCAAATGGCGTTTTAAGC
TGCATGAACAAAAATTGGATGGATATCAATTTTTCATGATACAATCTGTT
TCTCGTTTTTGAAGTTCAAAATAACTCCTCTAGATTTGAAATTTCACTAA
GGAAAATTAAGCTTATTGTCAGAAACTCTTGATTTGTCGACTTGTATTTG
AAAGCAGGATGTAAACTATCACAAACTATGATGTCATTTTTGACCACTTG
TCTCTGTTTATTTTTCCACTATCAATCCAATGCCAAGTAAAATAGTATCA
TCTCTCGTAACTTTTTTTCTTGCTCTACTGATTTGTGTGATGTGGTGATC
ATCTAATGAAGTGATAACTCATTTTTGGACTCTATCTTTTAGTTTCGTAA
AGTCTATTCTCTGTGTTTTCATTTTAATAGTTGAAGGCTTCATACTTCTT
GACTATAAATTACATTTTTATATTGCTCTCTAGAGCTAAAACAGTTTGAA
ATTATGGTTGTTGGTGAAATGATTGAGAAATTTCGGAAAACATCTATCGA
GAAGATTCGGAAGACATCAGTAGAGAAACTGGAACGACTTCGGAAGACTT
CGCGCGGACGAAGTAACCGCCGTACATCACGAGGAGAGTCATGTTCATGT
ATTGAATATCGTGGGACGTTCAAGTTGATGGTGCTTGGAGATCAAGGTGT
GGGGAAAAGTTCAATTTGTGCCAAATACACCTCAGTGGATGAAGAAATAT
TACAAGCATTTGATGAAGAGAGTGGAGAGAGGCAGCCCCGCGACGAACTC
TTTACAAGCTGTATTTATTTGAGTTCTGTTAACAGGAAAATTAAGCAATA
CGATTTGGAAATCGCTATTCCGAATGGAGTTTATTGGAATGGAACAGTCA
ACGGATACAAAGAAAGAATCAGTCAGACGAACGGCTTCATGTTGGTTTAC
TCAAAAGAAAATCGGCAAAGTTACATGAGGCTAATCGAACTTTTATCAGA
CATTAGAAAAATCAAAAAGATGGCCGAGCTTCCAATCATCATTGTTGGTA
ATAAATCAGACTTGAATGATATTAAAACATTGCAAGTGAAAGATTGTGAG
CATATAGTTTTGGGTGAATATCCACACTTTGATGTATCTGCAATGCAAAA
TGAAGGTATCCAAGAAGCTTTCAAACAACTTTCAGTCAACTGTTCGCACG
TGTTTGATGAAGATGAAGAAACTATTGAAGAGACTGGGGAAGAGAATGTC
AAAGAAATAGACTGATCAAATTGATCGTCGGTTGCCGTAAAAAAATTAAT
CGACTGGACGCTTAAAAAGAAAGCATTACAAAGTCAAAGTAACATTTTTG
TCTGAGCCCTGAAAAATTTATGGATTGTCGGAGAGGGAATGCAACAGTTT
CTATTTTTAATTGTCGATATTGAATAAATAATTAATAGTTGTAGCACTTT
TCTACAAGATCTTCATTTTTTTCTTCTTCATTTTCATCTTCATTTTTAGA
ATTTTTTAAAAGATATTTTTATTTCAAATTGTTCCACTTCAC Coding sequence (CDS) from alignment at scaffold_423:195376..198567- >TCONS_00064773 ID=TCONS_00064773|Name=TCONS_00064773|organism=Clytia hemisphaerica|type=CDS|length=762bp|location=Sequence derived from alignment at scaffold_423:195376..198567- (Clytia hemisphaerica)
ATGGTTGTTGGTGAAATGATTGAGAAATTTCGGAAAACATCTATCGAGAA
GATTCGGAAGACATCAGTAGAGAAACTGGAACGACTTCGGAAGACTTCGC
GCGGACGAAGTAACCGCCGTACATCACGAGGAGAGTCATGTTCATGTATT
GAATATCGTGGGACGTTCAAGTTGATGGTGCTTGGAGATCAAGGTGTGGG
GAAAAGTTCAATTTGTGCCAAATACACCTCAGTGGATGAAGAAATATTAC
AAGCATTTGATGAAGAGAGTGGAGAGAGGCAGCCCCGCGACGAACTCTTT
ACAAGCTGTATTTATTTGAGTTCTGTTAACAGGAAAATTAAGCAATACGA
TTTGGAAATCGCTATTCCGAATGGAGTTTATTGGAATGGAACAGTCAACG
GATACAAAGAAAGAATCAGTCAGACGAACGGCTTCATGTTGGTTTACTCA
AAAGAAAATCGGCAAAGTTACATGAGGCTAATCGAACTTTTATCAGACAT
TAGAAAAATCAAAAAGATGGCCGAGCTTCCAATCATCATTGTTGGTAATA
AATCAGACTTGAATGATATTAAAACATTGCAAGTGAAAGATTGTGAGCAT
ATAGTTTTGGGTGAATATCCACACTTTGATGTATCTGCAATGCAAAATGA
AGGTATCCAAGAAGCTTTCAAACAACTTTCAGTCAACTGTTCGCACGTGT
TTGATGAAGATGAAGAAACTATTGAAGAGACTGGGGAAGAGAATGTCAAA
GAAATAGACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064773-exon-scaffold_423-1575043694:198036..198567 | TCONS_00064773-exon-scaffold_423-1575043694:198036..198567 | Clytia hemisphaerica | exon |
| TCONS_00064773-exon-scaffold_423-1575043694:196916..197321 | TCONS_00064773-exon-scaffold_423-1575043694:196916..197321 | Clytia hemisphaerica | exon |
| TCONS_00064773-exon-scaffold_423-1575043694:195376..196434 | TCONS_00064773-exon-scaffold_423-1575043694:195376..196434 | Clytia hemisphaerica | exon |
| TCONS_00064773-exon-scaffold_423-1510915933:198036..198567 | TCONS_00064773-exon-scaffold_423-1510915933:198036..198567 | Clytia hemisphaerica | exon |
| TCONS_00064773-exon-scaffold_423-1510915933:196916..197321 | TCONS_00064773-exon-scaffold_423-1510915933:196916..197321 | Clytia hemisphaerica | exon |
| TCONS_00064773-exon-scaffold_423-1510915933:195376..196434 | TCONS_00064773-exon-scaffold_423-1510915933:195376..196434 | Clytia hemisphaerica | exon |
| TCONS_00064773-exon-scaffold_423-1491911889:198036..198567 | TCONS_00064773-exon-scaffold_423-1491911889:198036..198567 | Clytia hemisphaerica | exon |
| TCONS_00064773-exon-scaffold_423-1491911889:196916..197321 | TCONS_00064773-exon-scaffold_423-1491911889:196916..197321 | Clytia hemisphaerica | exon |
| TCONS_00064773-exon-scaffold_423-1491911889:195376..196434 | TCONS_00064773-exon-scaffold_423-1491911889:195376..196434 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_423 | supercontig | scaffold_423:195376..198567 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
The following BLAST results are available for this feature:
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