TCONS_00064766 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064766
Unique NameTCONS_00064766
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4449

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064766 ID=TCONS_00064766|Name=TCONS_00064766|organism=Clytia hemisphaerica|type=transcript|length=4449bp
ttcaggtgattaaaaaaatagtaaaacATAAAATTATCTATGAAAATTGC
TATGTTTTGAAGCTCTTGGCCAACTATTATATTGCAAAATGTTTCTTTTG
GAAGAAGTAAGAGAGCATGATACAAACAAACAATGGAACCCAATGTTTCA
AATGATGCATTTGGAGACAAGTCAGCAAATTGAACACAAAACATTGAAAG
CAGCTAAAGCCCCACAAAACCGTTCACTCAATCGATATAGAGATGTTTTA
CCATacGATGACACAAGAGTACATCTAAAGACAGGAAACACTGACTATAT
CAATGCTAATTATGTTGAGGTTTCAGACGTTGACAGAAAATACATTTTGG
CACAGGGTCCACTTCAAAATACATCTGGAGATTTTTGGCGGATGATTTGG
GAAAATGATAGTACATCAGTCATCATGCTTTGTCGTATTGTTGAGAAGCA
AATGaTAAAATGTCATCCATATTGGCCAATGGGTGAGGATGAAGTTGTAG
AATTTGGAAGCTTCCAAATTCAAAATGTACAGACGGTCATGAAACAACAC
TATGTCATCAGAGATTTACAATTGACTTATGTCTTGACGGGAGAAACGAA
ATCTATAAAGCAATACCATTTTATGACTTGGCCCGATTTTGGTGTACCAG
ATGATGCAAATTCGTTTGTTGAATTTCTCAATACGTTAAGGAAGGAtgat
gtttttcaaaatcaaagacCACCTGTTATACATTGCAGTGCTGGTATTGG
ACGTTCAGGAACGTTAATTTTGGTGGATGCTGCCCTTAAACTGTGTGAGG
ATAAGAACAGTCCAAATTCGTTAGACGTGAGAAAGATGTTGCTAGCATTG
CGTCAATTTCGTTGTGGCTTGGTTCAAACACCTCAACAGTTCCGATTCGC
TCACTTGGCAATATTGACAGGTCTCCATGATAAGTTCCCTTCACTGTTCA
GTGATGTTCCCAAAGAAATTGaaGAGGGTGATGAGGATGAAGCAGAGCCA
CCAGCCTTACCAGAAAAATCGAAACATAACAAAGTACCGCCCAAAAAACC
ACCACGTGCCTCGAACGCCACCAACACGCCCACCCCTGAGGATGACGTCC
GTAAATATAATCAAATCACGGATTTAGAATCATCTGATGGTAGTGGTGAA
GATGAAGTGATCGATCTTTCTGAAGTTTCTGACGACAATGAGGAGGACGA
AGATGCCACACCAGATTCACTAATAGATTCCCAAGAACAACCACAACAAA
GCAATGGTGTGGTCGAATCCAATGGAGATGATGAAGATTACCAGGAATTG
GATTTGACAGGTAAAGATTCAGAGGAGGATGATAACGAAGTTTACCAAGA
ATTAGATTTGACCAAAGTTGATCAGAACAATACTGGTAAGACAGACACAT
CAGAATCACAATCTAATATGGAGAAAGATGATAAAGTGTCTGATTTACCA
GAATCTTCAACTACTGCGCCAACAACCACTGATAAAGATTCGCCCTTACC
TGAACCACCAATTCAACAAAAATCTGAGATTTCGACAGCTGCTGGATCCA
AGAGAAAACGAGTTGCGGCAGAGGGAGAGGAGCGAGAAGAAAGAAGCCAC
ACAAGAACTCATAAACAACATAAAACAACGGATGAAGGATAGCGAGAACA
AGGCGAAGAAGGGAGCTTTTGAGAACAGTACAACGCTACTATATGTCGGT
GTCGCTATTGTCGTCACCTCTTGTGTCGTCTTGGCATACAAATGGTTAAG
TTGAAGAAATCGTCTTTTTACGAAATGGAGAGATTTTGGGAAAGTGTCTT
CTACCGTATTTTGCCTTCCTTTCTTCTCCACCACCACGCTGAACAGtgtt
agttttttttctacTGTAGTGTGATTCTAGAGCTGCTGTTTGGTCGTTAT
GGTGAGTTTAATGATGTTAAAAGTCTTTTCGATAATGGATTGTAGGTGTC
AACGACAAAAACAAGACTTTGGCTGCTTGGAAATGAAGACAAATTTAGAA
ACGATCCACCCTCTCTGCTTCACTAATACGTACTGCACCCTtctttaaaa
taatcaaaaaatgaattaagCTTGACCGGGTGCTTTACCATCAACCTACT
CACCACACCCCTTGTGTATCTATAATCTATTTCATTTACGCCACCGATAT
CCTCATTATTCACAAtacctaaaatgaaaaatttcaatcccCCCTACACT
TTTAACAACCCACATTTTGCTccacaaaatatttaattacaCCCCACCAA
GATTCCCTTACGGGTAAGAACATTCGCActaaaaattgcctaaaatttat
TAATCCAAGGGGACATCATGTACAAAGGGACACGTTTCAGAAGTGAGTGT
GTATATACAGAGACATATTATGAGCGAATgttaaaatgttaattttaaaT
AGTTTAGCATTGTTAGCATAACAtagtatacgtttttttataagaacaaa
ctatataggaaCATAAGTTTTTgctgaccaaaatgttaagaacatttgaa
ggctttgtggactcaaaaacaccccatttcttatgaaaatggtcaaaaat
attcacaaaattgtcaaaataagaacatgttaagaacattgttAGGCTTA
AatgatgttcttacaaaaaaatcgTGTACTGTGCTTTTTGGATATTTTAA
CTAATAGAACCCTATTGCTTTATAAATGGGAATGAAGATTTATTTTATAG
AGTTATATAATTATAATTTTGTTATTAATATAGGGAGTGTTTGTTTTGTT
ACTAATGATCTCCAGCATTGATTCGTATTAGATTTTTCTCTCCAGAACgt
agatagaccttttcataattacgtcacgaacatcacttgcctcgtattca
aacaattaccatggtgattatgtcccttgagacattaaattattttttta
tgaatagaaagtagttttgataaaatttgctGGGATTTAATCactatggc
aataatttcaaaacgatgcaagtgatgttcgtgacgtaatttatgagaAG
TTTCGTAGCAATTAATCATCATCATGTTATTTTTGTCTCCTTTAAACAAT
TATAATGATGAAGCTTCTGAAATGGTTGAAAACACAGAACGTATTATAGG
GAAGCAATCAAGGGGCATTTATTAGAATTTTTGTCTGCAAAACAATCTTA
ATGAGCCCTGAGTGCAAAATATAGTCAATCCTCTTTTATTACCTCAACTC
GTAACTCGAATCTTTGTGTAATTTGAAAACCGAACTTCAAGTCAATTGAT
GTCTcattagatagatagatatgagcccATCGAATGCATCcgggatgggt
cctacccacgaaggaTTGGGTATCGATCTCGGGCCTCCCAGGCGGGAGTC
GAGGAGGATAACCACTATGCCACTACGCCTTTTGATGTCTCTTCATTTTT
ATGTATATTTCACTAACGcgtcattttattgttttgtcgTTTCAACAGTT
TTTTTATATTCATGATAGCTTTATTCCCCATTTACAttgtaacatttttt
ttatactttatgacacggttctcataaaaaagcatttttattttttatgt
taaaACTATTTTACTGGTCCTTTTGTTATGTTAATctaagaatttttctg
tttttctaaaatttttgttgatttggtTTTAACGACAGTTCTCAGGCATT
TGGATGGAAGAGAAGGAGCCTTACGCTCGGGACAAAGAAGATATTCcgta
actttttttttgaatattatAAGAAATCTTTGCTTTGTCGGAAAAATCTT
AGAGGNATTCCGTAACTTTTTATTCTGAATATTCTAAGAAATCTTTGCTT
TGTCGGAAAAATCTTAGAGAATAAATACACAGATTGCAAagttaaagtct
gaagacaaatcacgcttttattcgaaatttttatgtgcttgttacatgac
atttatttctgattggttcgaatttattgacactactaaagttatcagct
gtaagtcgtaaagcaagtaacatgggaataaaatcacatgaactttttcg
agtaatcgcatgttttgactgcattgatataattttgcaacccgggTGTA
TTTGTTTAACTTTCCACTTTTTCTCATACTAGTCTTCATGGTCGTAGTAT
TCAAAATAAAGTATCTTTTATGCTGAGATCATGTTCACGGTTCCGTTTTG
CTCCAAAActaaatgaagccattctaatGGTTATattcaagtgttacgtc
acttctcaccaatagaatggcttcattccgtTTTTGAGCGAAACTGAACC
GTCACATGCGAACATGGTCTTGTACTACgtatgttttttttatgttttat
tctAATATAATATTTATCAAGGTTAAAATTTGGAATACTAGATTTAAGAA
AATAACGTTTAATCCTGAATTTTAAGAAATTCGTGTAAAGAGAAATTAGG
TTTAATACAATTTTTGTagtttcaaaatataaaagatgaaaaagtttaC
Run BLAST on NCBI

transcript from alignment at scaffold_423:19052..28335-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064766 ID=TCONS_00064766|Name=TCONS_00064766|organism=Clytia hemisphaerica|type=transcript|length=9284bp|location=Sequence derived from alignment at scaffold_423:19052..28335- (Clytia hemisphaerica)
TTCAGGTGATTAAAAAAATAGTAAAACATAAAATTATCTATGAAAATTGC
TATGTTTTGAAGCTCTTGGCCAACTATTATATTGCAAAATGTTTCTTTTG
GAAGAAGTAAGAGAGCATGATACAAACAAACAATGGAACCCAATGTTTCA
AGTAAGTCAATACATCGCTATGTGGCACAATAATAAGTTCCTGCTATTGT
ATGTATAAAGGCTTTTCATTTTTCTGATTAATTTATTTACTGTTTGCTCA
TTGATTTTTGATTCATGAAGTCTTTTATTTTTGTTGTCAAAAATTTTCAT
CCCTCTCTAGGTCAAGCAATATGGGTTAGTTAAAAAAAAGTTATTTAAGC
TAGGCTGTGTAGATGTCATTTTTTGAATAGTTAAGCTGTAAGTAAAAAGG
ACGATACCCTTATAATATAACCTACTAAGTATCCTCCTTCCACCTTTTTA
TAGTTAAAGTAGTATTTCTTAATTTCAATCCCTTGCAAAAATGTTTTTGA
ATACTTTACCATATAGATGATGCATTTGGAGACAAGTCAGCAAATTGAAC
ACAAAACATTGAAAGCAGCTAAAGCCCCACAAAACCGTTCACTCAATCGA
TATAGAGATGTTTTACCATGTAAGTTTATCATCTTTAATACATATCAATG
AGAAAATAATGATATAGTGCGAGATAACCCGCAGTTATCATAACATTGAA
TAAGCCTCCATAACATAAATTTCACTGCAATAATTTTAAAGGTAGGGCAT
TAGAACCCACTGACAGCCGAAGAAGACACCTCTATCTCCCAGTGGTCAGC
CTTTCTAATTCAGATTAACCTGCGTCGGCAAAAATTTCTGGGTTCTATAG
TACAGTAAGCACTTTCATGTCGGCAAAAGCCAAATTTACGTCAGCATTTG
CGTCGACATAGCCAAATGCCGACGCGAATTAGAATGGCTGGTGGTAGTCG
CCTCAAAGAGGCAGTTTTGAAGTTGGAAAGGGTCAGATATAACCACAAGC
TAATGGAAAGAAAACGGTCCACCACATTTCTTTTGTTTCAGACGATGACA
CAAGAGTACATCTAAAGACAGGAAACACTGACTATATCAATGCTAATTAT
GTTGAGGTATATTTATTTATTGGATAATAATTAGATACCCAGATAAAATT
CTGATTCTACATTTTAAATAGAAATGAAATGAACTGAAATAAAAATAATC
AACAACAACTTTCTAAGACATCACTGGACATTCTAAGAATACTAAAGAAA
GCTCCCTAATGTTGCATTTACTTTTATTAGGATGTGTTTCATGGGCAATC
ATGACTATTCCTGAACCTTCATGAAAATTTTTGAACTTTTTAAAATGTTT
GCAAATTCTCCTTTTGAGTTAACTTTAACTTTTGGACCCAAAAGATCATT
TGTGAGCATTCAACGTTCTGGAATGTTCCTGACTTTAGTAACTTAAAGGG
GAACCATTCAAGAAGGTTTGGGAAGCACAAATACTTTCCTTTAGATTTGA
TTTGATTCTAGACCCAACCAACCAATAAAATCTTCTTTCAATTTAGGTTT
CAGACGTTGACAGAAAATACATTTTGGCACAGGTTAGGATCCTTCAAGTT
TTGGTATTATCATTATCTTTTAAAAACAAAAAGGCCTTTTGTCATATGGA
CGGTAGTTATTTTTACTGATTTAAAAAAAAAATTATTTTAATTAAAAGTA
ATTGATACCATCTTTTCACCTTTCTTGTTTTTAATATCTCATTTTAAGGG
TCCACTTCAAAATACATCTGGAGATTTTTGGCGGATGATTTGGGAAAATG
ATAGTACATCAGTCATCATGCTTTGTCGTATTGTTGAGAAGCAAATGGTT
TGTATGACGTGTCCTCGTTGAAATATTTGACTCTCTCCTCAAAAAGAATA
CTTTCCTGGTAAAATTCCAAGCATTTTAGTCACTGGCGTTTTTTGGATTA
GAACTTGAGTTTTGACCAACTGAGTAACCACCATAAGTGGTCGATGCCTG
TCAAAGGCCCTCGAAACTTGTTAGAGACATCCCTTAACCTTTCATGAAAC
ATTTATTTTCAAGGAATTTTAATCATAAAGAGAAAATAATTCTGACATTG
CTCACCATATACATATTATTTTCAACATTTTTTGATACATAGATGGAATT
TTTCAAATATTAATATTCAAAAAAGTGCTTGGAATTTTCACCGCTTTCCT
AAATCAATTCTACTAAGGGGATTCTAATTTAAAAATTTATAACGTCCGAC
TTTACAATAATGTCAAGAAGTTGAACTCATTAATGTTTTTTTTTCTACAG
ATAAAATGTCATCCATATTGGCCAATGGGTGAGGATGAAGTTGTAGAATT
TGGAAGCTTCCAAATTCAAAATGTACAGACGGTCATGAAACAACACTATG
TCATCAGAGATTTACAATTGACTTATGTCTTGGTAACAGAATTAGATAAT
TTCTTTTTTCATTTGATTCATATTATGACCACTATTATAGCAGATTTTAG
AATAAGGAACTGTACCCATTATGGTTTCTTTTAATTTTTAAATAACATTA
AGTGGATTTTTAAAATGTTATGCCGAAGTTTACGGACATTGTTATCTATC
TAATGAAACTTTCTAAAATTTTCCTGCGTGAATTTTTATACAAATTGCTA
ATCCTTGTCTTGGGTTTTACTTAGAATATCTGCCAAAATCCTTCAGCCTT
ATTCTCGAAAAAAGAAAGGTTTTTTAAATTTTGATTCTGTGAAACTCCCA
TCAATGATCTTAGAAGATTTCCACAATAAACCTGGAGGATTTTGGCTGAT
TTTCTAAGTAAAACTCATACAAAAGGATTAACAATTTGTATAGAAATTCA
CACAGGAAAGTTTTAGAAAGTTTTATTAGATAGATATTAGAAGCTTATTC
TTTCCCTATTTTTAGACGGGAGAAACGAAATCTATAAAGCAATACCATTT
TATGACTTGGCCCGATTTTGGTGTACCAGATGATGCAAATTCGTTTGTTG
AATTTCTCAATACGTTAAGGAAGGATGATGTTTTTCAAAATCAAAGACCA
CCTGTTATACATTGCAGGTGAACTTTCAGAATTGTCCCCCATTAGTGGCA
AAGGAGTTTAGTGATTATCGCGCTCAACTCCCTACTGAACGTAGATTTTG
CTTTGGTTGACCAGAGAAACATTAAGAGACCGTTAAGCCCTCTGACGAGA
GCATCAGCACTTATTTAGACAAGAAGCCGAAACGACACAAAGGCCCAGCA
ACATAGCAATAAGTCGAATGTTTGCTCACGCGTACATTCTGTGCTTATTT
TTAATAGGCATCGTCTTTCCCAAAATATTAACTTATTAAACTGTAAAATG
ACTATCTGTTCTCTCAAACTGCTTATTCCTCTTTCAGTGCTGGTATTGGA
CGTTCAGGAACGTTAATTTTGGTGGATGCTGCCCTTAAACTGGTAAGAAC
ATCTTCTCCCTTTTGTTCGAAAGAGATGTTTTATACAACAGTAATATGAA
AATAACTTTTTCGTTGTTTCACCTTGACAATGTTAAGTATGACAATCAAA
ATGCTCTTAATAACCCTATTTTTACCAGGCTTTCAGGGATGGTTCAAAAC
TAGGGGCTGATGACTGATGACGTCACTCATCATGCCAAAAGTTAGCAAAA
ATCGAAAATTTCCTTTGTTCTTATAAATAGCTTTTGTTTTCTAACAAAAA
GGCTTTAGAAAAAAGTACCATTAGTCTAAAATTGGAAATGTGTCAATTTT
TGTGACACCTTTTACTGTCAGAAATGTCATCATGCTCAATGTGTAGAAAT
CTTTTAGATATCAATTTTTTTTTATTTGAAGCAAAAAAAAGTTACGAATT
TACAGAAAATTCATACTAAAAGGTCAATTATTTCAGAAGTTAATAACATA
AGGTTCACTGTCGAACAAAAACAGCCCCCCCCCCCTAGTACACATAGGAT
TAATATAAATTCTTAAATTTTTCCATTAATTAATTTCAAATTGAATTTTG
TAACCTAAGTTTTGCTTTGTTCATCTTGAAAGCTCTAGTTGAACAATTTT
CTACCAAGTTCAATCAACAAGGGTGTAAATTTCCGTTGTCTAAAAAGATA
GAGCTAAGTACCTTTCTTTCTTTGGTTTAGTGTGAGGATAAGAACAGTCC
AAATTCGTTAGACGTGAGAAAGATGTTGCTAGCATTGCGTCAATTTCGTT
GTGGCTTGGTTCAAACACCTCAACAGTTCCGATTCGCTCACTTGGCAATA
TTGACAGGTCTCCATGATAAGTTCCCTTCACTGTTCAGTGATGTTCCCAA
AGAAATTGGTAAGAAAAAGTGTAATTCTGTTAATAGGCCTTATTGAATGA
GAGTTAGGATTGGATCCTTTGTGATGCCATATTTATAGAAAGTTTCTTTA
ACACATTTCAGTGAAAATCTATTTACCCTGGCCTTGAAAACTATCCATTC
TTCGACACAGCAAACTTTTGAGCTGATTGTCTAAAGCAAAGCAATGTCAC
CGAAATTAAAAGTTGATCTTTTAACAAAAAACTTTGAATATTTTGGTTTA
AAGCAGATCATCACATTGACCGTCCCTAGTGGAGAAGGAGAGTGGTGTTT
TCAAATTTAAAAACTTTTGGCCGAGAGAGACAAAATTAGGCTTTTCCAGG
AATAGTCCGTGCCCTCTGTTGAGGATATTGGATATCCAGGGGGTTAACGA
TTTTTGTTCAAAAGTGGATATCCAGGGGGTTAAGTATCTACAAGGAAGCG
GATATCCAGGGGGTAAAGGTTGAGCATATTTTTAACAGTGGATATCCAGA
AGGTCTTCACTAATAAAGTATGATATCCAGGGGGTTCGATACTTCGAAAA
ATCAATATACTCAACAGTGGGGGTAAAATTTTTTCTGAAAAAGCCATGGT
TTTCACTTATTGTCTGCTTTTGTATAGAAAGATATGATTTTCCTTTTTTA
GAAGAGGGTGATGAGGATGAAGCAGAGCCACCAGCCTTACCAGAAAAATC
GAAACATAACAAAGTACCGCCCAAAAAACCACCACGTGCCTCGAACGCCA
CCAACACGCCCACCCCTGAGGATGACGTCCGTAAATATAATCAAATCACG
GGTAACTTTTCGATTCTTTTAATCTTCCCAGATCTACTAGAGTCAGAAGA
GTTCAACTAAAAGTTATGTGATAGCCGTCGCAGTCGTGTATTAAAAACAA
TTTTTACTTCGATAAGCTTATTCGCGTTTCATTCAGCTTGATCTTCCTTA
TTTCGAAAAATTAGTGTAATAGATCATCATTGGTTGCTTACAAACTTTGA
AAACCCCCACATTTGACCGTTTTAACGGTAGTGTTATTCAGTTTTAGCGG
TTTTAGAAATCTGAATCGTTAGATCTGAAAAGTTCGCTATTTGCTTTCAC
TTCTGGTCGACCAGGGTCGACGTTTTGAAATTGAAAGGCTCGGAAAAATG
TTGTAAAACAGGAAACAAAATGGCGTACTAGTTCTTAGCTGGCTCTTAAA
CTTTAGTCACACTTTCACGGTAAATCTGTAAACAAGTTATCCTAATGTGT
AAAAGAAAACGATAACCTGTAAAATTCGACACAATAGATTTAGAATCATC
TGATGGTAGTGGTGAAGATGAAGTGATCGATCTTTCTGAAGTTTCTGACG
ACAATGAGGAGGACGAAGATGCCACACCAGATTCACTAATAGATTCCCAA
GAACAACCACAACAAAGCAATGGTGTGGTCGAATCCAATGGAGATGATGA
AGATTACCAGGAATTGGATTTGACAGGTAAAGATTCAGAGGAGGATGATA
ACGAAGTTTACCAAGAATTAGATTTGACCAAAGTTGATCAGAACAATACT
GGTAAGACAGACACATCAGAATCACAATCTAATATGGAGAAAGATGATAA
AGTGTCTGATTTACCAGAATCTTCAACTACTGCGCCAACAACCACTGATA
AAGATTCGCCCTTACCTGAACCACCAATTCAACAAAAATCTGAGATTTCG
ACAGCTGCTGGATCCAAGGCAAGGTATTTACTTTATTGTTTCATCTTCTC
TTTTTTCCCGAGCAAAGATCTGAAAAATGTTTACCTATGTATATATTTGT
ATGCATTCCTAGATATGTCTGTCTATTCTTCTTTTTGAAATATTTTAAAC
GAATTTATCATTGAAAGATTTATTTCCAATTTGATATGATTCTGATTCAA
GAATTGTTTACTTACAAATTGTTATCAGTTGAATGAGATGCTAGGCAATT
CGATCTGCCTAGCCAGGGTGCAATATGCAGTCCTGACGAGTCCTAACGAG
TCCTAATAAGGACGAAATGTGTATGTTGCTCTGCCACCCAAATCTCCTTC
TTCACGTTCTTCACACATATAATTTTATTTTCTACAGAGAAAACGAGTTG
CGGCAGAGGGAGAGGAGCGAGAAGAAAGAAGCCACACAAGAACTCATAAA
CAACATAAAACAACGGATGAAGGATAGCGAGAACAAGGCGAAGAAGGGAG
CTTTTGAGAACAGTACAACGCTACTATATGTCGGTGTCGCTATTGTCGTC
ACCTCTTGTGTCGTCTTGGCATACAAATGGTTAAGTTGAAGAAATCGTCT
TTTTACGAAATGGAGAGATTTTGGGAAAGTGTCTTCTACCGTATTTTGCC
TTCCTTTCTTCTCCACCACCACGCTGAACAGTGTTAGTTTTTTTTCTACT
GTAGTGTGATTCTAGAGCTGCTGTTTGGTCGTTATGGTGAGTTTAATGAT
GTTAAAAGTCTTTTCGATAATGGATTGTAGGTGTCAACGACAAAAACAAG
ACTTTGGCTGCTTGGAAATGAAGACAAATTTAGAAACGATCCACCCTCTC
TGCTTCACTAATACGTACTGCACCCTTCTTTAAAATAATCAAAAAATGAA
TTAAGCTTGACCGGGTGCTTTACCATCAACCTACTCACCACACCCCTTGT
GTATCTATAATCTATTTCATTTACGCCACCGATATCCTCATTATTCACAA
TACCTAAAATGAAAAATTTCAATCCCCCCTACACTTTTAACAACCCACAT
TTTGCTCCACAAAATATTTAATTACACCCCACCAAGATTCCCTTACGGGT
AAGAACATTCGCACTAAAAATTGCCTAAAATTTATTAATCCAAGGGGACA
TCATGTACAAAGGGACACGTTTCAGAAGTGAGTGTGTATATACAGAGACA
TATTATGAGCGAATGTTAAAATGTTAATTTTAAATAGTTTAGCATTGTTA
GCATAACATAGTATACGTTTTTTTATAAGAACAAACTATATAGGAACATA
AGTTTTTGCTGACCAAAATGTTAAGAACATTTGAAGGCTTTGTGGACTCA
AAAACACCCCATTTCTTATGAAAATGGTCAAAAATATTCACAAAATTGTC
AAAATAAGAACATGTTAAGAACATTGTTAGGCTTAAATGATGTTCTTACA
AAAAAATCGTGTACTGTGCTTTTTGGATATTTTAACTAATAGAACCCTAT
TGCTTTATAAATGGGAATGAAGATTTATTTTATAGAGTTATATAATTATA
ATTTTGTTATTAATATAGGGAGTGTTTGTTTTGTTACTAATGATCTCCAG
CATTGATTCGTATTAGATTTTTCTCTCCAGAACGTAGATAGACCTTTTCA
TAATTACGTCACGAACATCACTTGCCTCGTATTCAAACAATTACCATGGT
GATTATGTCCCTTGAGACATTAAATTATTTTTTTATGAATAGAAAGTAGT
TTTGATAAAATTTGCTGGGATTTAATCACTATGGCAATAATTTCAAAACG
ATGCAAGTGATGTTCGTGACGTAATTTATGAGAAGTTTCGTAGCAATTAA
TCATCATCATGTTATTTTTGTCTCCTTTAAACAATTATAATGATGAAGCT
TCTGAAATGGTTGAAAACACAGAACGTATTATAGGGAAGCAATCAAGGGG
CATTTATTAGAATTTTTGTCTGCAAAACAATCTTAATGAGCCCTGAGTGC
AAAATATAGTCAATCCTCTTTTATTACCTCAACTCGTAACTCGAATCTTT
GTGTAATTTGAAAACCGAACTTCAAGTCAATTGATGTCTCATTAGATAGA
TAGATATGAGCCCATCGAATGCATCCGGGATGGGTCCTACCCACGAAGGA
TTGGGTATCGATCTCGGGCCTCCCAGGCGGGAGTCGAGGAGGATAACCAC
TATGCCACTACGCCTTTTGATGTCTCTTCATTTTTATGTATATTTCACTA
ACGCGTCATTTTATTGTTTTGTCGTTTCAACAGTTTTTTTATATTCATGA
TAGCTTTATTCCCCATTTACATTGTAACATTTTTTTTATACTTTATGACA
CGGTTCTCATAAAAAAGCATTTTTATTTTTTATGTTAAAACTATTTTACT
GGTCCTTTTGTTATGTTAATCTAAGAATTTTTCTGTTTTTCTAAAATTTT
TGTTGATTTGGTTTTAACGACAGTTCTCAGGCATTTGGATGGAAGAGAAG
GAGCCTTACGCTCGGGACAAAGAAGATATTCCGTAACTTTTTTTTTGAAT
ATTATAAGAAATCTTTGCTTTGTCGGAAAAATCTTAGAGGNATTCCGTAA
CTTTTTATTCTGAATATTCTAAGAAATCTTTGCTTTGTCGGAAAAATCTT
AGAGAATAAATACACAGATTGCAAAGTTAAAGTCTGAAGACAAATCACGC
TTTTATTCGAAATTTTTATGTGCTTGTTACATGACATTTATTTCTGATTG
GTTCGAATTTATTGACACTACTAAAGTTATCAGCTGTAAGTCGTAAAGCA
AGTAACATGGGAATAAAATCACATGAACTTTTTCGAGTAATCGCATGTTT
TGACTGCATTGATATAATTTTGCAACCCGGGTGTATTTGTTTAACTTTCC
ACTTTTTCTCATACTAGTCTTCATGGTCGTAGTATTCAAAATAAAGTATC
TTTTATGCTGAGATCATGTTCACGGTTCCGTTTTGCTCCAAAACTAAATG
AAGCCATTCTAATGGTTATATTCAAGTGTTACGTCACTTCTCACCAATAG
AATGGCTTCATTCCGTTTTTGAGCGAAACTGAACCGTCACATGCGAACAT
GGTCTTGTACTACGTATGTTTTTTTTATGTTTTATTCTAATATAATATTT
ATCAAGGTTAAAATTTGGAATACTAGATTTAAGAAAATAACGTTTAATCC
TGAATTTTAAGAAATTCGTGTAAAGAGAAATTAGGTTTAATACAATTTTT
GTAGTTTCAAAATATAAAAGATGAAAAAGTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040614XLOC_040614Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064766-exon-scaffold_423-1575043694:28185..28335TCONS_00064766-exon-scaffold_423-1575043694:28185..28335Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:27717..27819TCONS_00064766-exon-scaffold_423-1575043694:27717..27819Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:27230..27294TCONS_00064766-exon-scaffold_423-1575043694:27230..27294Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:26754..26789TCONS_00064766-exon-scaffold_423-1575043694:26754..26789Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:26489..26587TCONS_00064766-exon-scaffold_423-1575043694:26489..26587Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:25904..26035TCONS_00064766-exon-scaffold_423-1575043694:25904..26035Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:25269..25420TCONS_00064766-exon-scaffold_423-1575043694:25269..25420Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:24894..24948TCONS_00064766-exon-scaffold_423-1575043694:24894..24948Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:24028..24205TCONS_00064766-exon-scaffold_423-1575043694:24028..24205Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:23235..23384TCONS_00064766-exon-scaffold_423-1575043694:23235..23384Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:22318..22748TCONS_00064766-exon-scaffold_423-1575043694:22318..22748Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1575043694:19052..21948TCONS_00064766-exon-scaffold_423-1575043694:19052..21948Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:28185..28335TCONS_00064766-exon-scaffold_423-1510915933:28185..28335Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:27717..27819TCONS_00064766-exon-scaffold_423-1510915933:27717..27819Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:27230..27294TCONS_00064766-exon-scaffold_423-1510915933:27230..27294Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:26754..26789TCONS_00064766-exon-scaffold_423-1510915933:26754..26789Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:26489..26587TCONS_00064766-exon-scaffold_423-1510915933:26489..26587Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:25904..26035TCONS_00064766-exon-scaffold_423-1510915933:25904..26035Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:25269..25420TCONS_00064766-exon-scaffold_423-1510915933:25269..25420Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:24894..24948TCONS_00064766-exon-scaffold_423-1510915933:24894..24948Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:24028..24205TCONS_00064766-exon-scaffold_423-1510915933:24028..24205Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:23235..23384TCONS_00064766-exon-scaffold_423-1510915933:23235..23384Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:22318..22748TCONS_00064766-exon-scaffold_423-1510915933:22318..22748Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1510915933:19052..21948TCONS_00064766-exon-scaffold_423-1510915933:19052..21948Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:28185..28335TCONS_00064766-exon-scaffold_423-1491911889:28185..28335Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:27717..27819TCONS_00064766-exon-scaffold_423-1491911889:27717..27819Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:27230..27294TCONS_00064766-exon-scaffold_423-1491911889:27230..27294Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:26754..26789TCONS_00064766-exon-scaffold_423-1491911889:26754..26789Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:26489..26587TCONS_00064766-exon-scaffold_423-1491911889:26489..26587Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:25904..26035TCONS_00064766-exon-scaffold_423-1491911889:25904..26035Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:25269..25420TCONS_00064766-exon-scaffold_423-1491911889:25269..25420Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:24894..24948TCONS_00064766-exon-scaffold_423-1491911889:24894..24948Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:24028..24205TCONS_00064766-exon-scaffold_423-1491911889:24028..24205Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:23235..23384TCONS_00064766-exon-scaffold_423-1491911889:23235..23384Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:22318..22748TCONS_00064766-exon-scaffold_423-1491911889:22318..22748Clytia hemisphaericaexon
TCONS_00064766-exon-scaffold_423-1491911889:19052..21948TCONS_00064766-exon-scaffold_423-1491911889:19052..21948Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_423supercontigscaffold_423:19052..28335 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.785892	0.862795	0.319948	0.487132	12.5501	8.05066	3.79741	5.98607	2.2785	4.72303	3.30623	1.84764	1.81155	1.21825	1.20905	1.96725	2.47865	1.22282	0.871158	1.82111	1.36661	0.58107	1.14749e-10	1.49105	1.89424	2.10231	2.24801	0	1.67024	1.94946
Blast
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BLAST of TCONS_00064766 vs. Swiss-Prot (Human)
Match: PTN2 (Tyrosine-protein phosphatase non-receptor type 2 OS=Homo sapiens GN=PTPN2 PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 7.736e-71
Identity = 121/276 (43.84%), Postives = 175/276 (63.41%), Query Frame = 2 
Query:  104 EVREHDTNKQWNPMFQMMHLETSQQIEHKTLKAAKAPQNRSLNRYRDVLPYDDTRVHLKTGNTDYINANYVEVSDVDRKYILAQGPLQNTSGDFWRMIWENDSTSVIMLCRIVEKQMIKCHPYWPMGEDEVV--EFGSFQIQNVQTVMKQHYVIRDLQLTYVLTGETKSIKQYHFMTWPDFGVPDDANSFVEFLNTLRKDDVFQ-NQRPPVIHCSAGIGRSGTLILVDAALKLCEDKNSPNSLDVRKMLLALRQFRCGLVQTPQQFRFAHLAILTG 922
            E  E DT ++W P++    LE   +      + AK P+NR+ NRYRDV PYD +RV L+    DYINA+ V++ +  R YIL QGPL NT   FW M+W+  + +V+ML RIVEK+ +KC  YWP  + E++  E G F ++ +   +K +Y +  LQL  + +GET++I  +H+ TWPDFGVP+   SF+ FL  +R+      +  P VIHCSAGIGRSGT  LVD  L L E  +  N   ++++LL +R++R GL+QTP Q RF+++AI+ G
Sbjct:    8 EFEELDTQRRWQPLY----LEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETG-FSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDIN---IKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEG 275
The following BLAST results are available for this feature:
BLAST of TCONS_00064766 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTN27.736e-7143.84Tyrosine-protein phosphatase non-receptor type 2 O... [more]
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