TCONS_00064764 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064764
Unique NameTCONS_00064764
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4938

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064764 ID=TCONS_00064764|Name=TCONS_00064764|organism=Clytia hemisphaerica|type=transcript|length=4938bp
caggtgattaaaaaaatagtaaaacATAAAATTATCTATGAAAATTGCTA
TGTTTTGAAGCTCTTGGCCAACTATTATATTGCAAAATGTTTCTTTTGGA
AGAAGTAAGAGAGCATGATACAAACAAACAATGGAACCCAATGTTTCAAA
TGATGCATTTGGAGACAAGTCAGCAAATTGAACACAAAACATTGAAAGCA
GCTAAAGCCCCACAAAACCGTTCACTCAATCGATATAGAGATGTTTTACC
ATacGATGACACAAGAGTACATCTAAAGACAGGAAACACTGACTATATCA
ATGCTAATTATGTTGAGGTTTCAGACGTTGACAGAAAATACATTTTGGCA
CAGGGTCCACTTCAAAATACATCTGGAGATTTTTGGCGGATGATTTGGGA
AAATGATAGTACATCAGTCATCATGCTTTGTCGTATTGTTGAGAAGCAAA
TGaTAAAATGTCATCCATATTGGCCAATGGGTGAGGATGAAGTTGTAGAA
TTTGGAAGCTTCCAAATTCAAAATGTACAGACGGTCATGAAACAACACTA
TGTCATCAGAGATTTACAATTGACTTATGTCTTGACGGGAGAAACGAAAT
CTATAAAGCAATACCATTTTATGACTTGGCCCGATTTTGGTGTACCAGAT
GATGCAAATTCGTTTGTTGAATTTCTCAATACGTTAAGGAAGGAtgatgt
ttttcaaaatcaaagacCACCTGTTATACATTGCAGTGCTGGTATTGGAC
GTTCAGGAACGTTAATTTTGGTGGATGCTGCCCTTAAACTGTGTGAGGAT
AAGAACAGTCCAAATTCGTTAGACGTGAGAAAGATGTTGCTAGCATTGCG
TCAATTTCGTTGTGGCTTGGTTCAAACACCTCAACAGTTCCGATTCGCTC
ACTTGGCAATATTGACAGGTCTCCATGATAAGTTCCCTTCACTGTTCAGT
GATGTTCCCAAAGAAATTGaaGAGGGTGATGAGGATGAAGCAGAGCCACC
AGCCTTACCAGAAAAATCGAAACATAACAAAGTACCGCCCAAAAAACCAC
CACGTGCCTCGAACGCCACCAACACGCCCACCCCTGAGGATGACGTCCGT
AAATATAATCAAATCACGGGTAACTTTTCGATTCTTTTAATCTTCCCAGA
TCTACTAGAGTCAGAAGAGTTCAACTAAAAGTTATGTGATAGCCGTCGCA
GTCGTgtattaaaaacaatttttacttCGATAAGCTTATTCGCGTTTCAT
TCAGCTTGATCTTCCTTATTTCGAAAAATTAGTGTAATAGATCATCATTG
GTTGCTTACAAACTTTGAAAACCCCCACATTTGACCGTTTTAACGGTAGT
GTTATTCAGTTTTAGCGGTTTTAGAAATCTGAATCGTTAGATCTGAAAAG
TTCGCTATTTGCTTTCACTTCTGGTCGACCAGGGTCGACGTTTTGAAATt
gaaaggctcggaaaaatgtTGTAAAACAGGAAACAAAATGGCGTACTAGT
TCTTAGCTGGCTCTTAAACTTTAGTCACACTTTCACGGTAAATCTGTAAA
CAAGTTATCCTAATGTGTAAAAGAAAACGATAACCTGTAAAATTCGACAC
AATAGATTTAGAATCATCTGATGGTAGTGGTGAAGATGAAGTGATCGATC
TTTCTGAAGTTTCTGACGACAATGAGGAGGACGAAGATGCCACACCAGAT
TCACTAATAGATTCCCAAGAACAACCACAACAAAGCAATGGTGTGGTCGA
ATCCAATGGAGATGATGAAGATTACCAGGAATTGGATTTGACAGGTAAAG
ATTCAGAGGAGGATGATAACGAAGTTTACCAAGAATTAGATTTGACCAAA
GTTGATCAGAACAATACTGGTAAGACAGACACATCAGAATCACAATCTAA
TATGGAGAAAGATGATAAAGTGTCTGATTTACCAGAATCTTCAACTACTG
CGCCAACAACCACTGATAAAGATTCGCCCTTACCTGAACCACCAATTCAA
CAAAAATCTGAGATTTCGACAGCTGCTGGATCCAAGGCAAGAGAAAACGA
GTTGCGGCAGAGGGAGAGGAGCGAGAAGAAAGAAGCCACACAAGAACTCA
TAAACAACATAAAACAACGGATGAAGGATAGCGAGAACAAGGCGAAGAAG
GGAGCTTTTGAGAACAGTACAACGCTACTATATGTCGGTGTCGCTATTGT
CGTCACCTCTTGTGTCGTCTTGGCATACAAATGGTTAAGTTGAAGAAATC
GTCTTTTTACGAAATGGAGAGATTTTGGGAAAGTGTCTTCTACCGTATTT
TGCCTTCCTTTCTTCTCCACCACCACGCTGAACAGtgttagttttttttc
tacTGTAGTGTGATTCTAGAGCTGCTGTTTGGTCGTTATGGTGAGTTTAA
TGATGTTAAAAGTCTTTTCGATAATGGATTGTAGGTGTCAACGACAAAAA
CAAGACTTTGGCTGCTTGGAAATGAAGACAAATTTAGAAACGATCCACCC
TCTCTGCTTCACTAATACGTACTGCACCCTtctttaaaataatcaaaaaa
tgaattaagCTTGACCGGGTGCTTTACCATCAACCTACTCACCACACCCC
TTGTGTATCTATAATCTATTTCATTTACGCCACCGATATCCTCATTATTC
ACAAtacctaaaatgaaaaatttcaatcccCCCTACACTTTTAACAACCC
ACATTTTGCTccacaaaatatttaattacaCCCCACCAAGATTCCCTTAC
GGGTAAGAACATTCGCActaaaaattgcctaaaatttatTAATCCAAGGG
GACATCATGTACAAAGGGACACGTTTCAGAAGTGAGTGTGTATATACAGA
GACATATTATGAGCGAATgttaaaatgttaattttaaaTAGTTTAGCATT
GTTAGCATAACAtagtatacgtttttttataagaacaaactatataggaa
CATAAGTTTTTgctgaccaaaatgttaagaacatttgaaggctttgtgga
ctcaaaaacaccccatttcttatgaaaatggtcaaaaatattcacaaaat
tgtcaaaataagaacatgttaagaacattgttAGGCTTAAatgatgttct
tacaaaaaaatcgTGTACTGTGCTTTTTGGATATTTTAACTAATAGAACC
CTATTGCTTTATAAATGGGAATGAAGATTTATTTTATAGAGTTATATAAT
TATAATTTTGTTATTAATATAGGGAGTGTTTGTTTTGTTACTAATGATCT
CCAGCATTGATTCGTATTAGATTTTTCTCTCCAGAACgtagatagacctt
ttcataattacgtcacgaacatcacttgcctcgtattcaaacaattacca
tggtgattatgtcccttgagacattaaattatttttttatgaatagaaag
tagttttgataaaatttgctGGGATTTAATCactatggcaataatttcaa
aacgatgcaagtgatgttcgtgacgtaatttatgagaAGTTTCGTAGCAA
TTAATCATCATCATGTTATTTTTGTCTCCTTTAAACAATTATAATGATGA
AGCTTCTGAAATGGTTGAAAACACAGAACGTATTATAGGGAAGCAATCAA
GGGGCATTTATTAGAATTTTTGTCTGCAAAACAATCTTAATGAGCCCTGA
GTGCAAAATATAGTCAATCCTCTTTTATTACCTCAACTCGTAACTCGAAT
CTTTGTGTAATTTGAAAACCGAACTTCAAGTCAATTGATGTCTcattaga
tagatagatatgagcccATCGAATGCATCcgggatgggtcctacccacga
aggaTTGGGTATCGATCTCGGGCCTCCCAGGCGGGAGTCGAGGAGGATAA
CCACTATGCCACTACGCCTTTTGATGTCTCTTCATTTTTATGTATATTTC
ACTAACGcgtcattttattgttttgtcgTTTCAACAGTTTTTTTATATTC
ATGATAGCTTTATTCCCCATTTACAttgtaacattttttttatactttat
gacacggttctcataaaaaagcatttttattttttatgttaaaACTATTT
TACTGGTCCTTTTGTTATGTTAATctaagaatttttctgtttttctaaaa
tttttgttgatttggtTTTAACGACAGTTCTCAGGCATTTGGATGGAAGA
GAAGGAGCCTTACGCTCGGGACAAAGAAGATATTCcgtaacttttttttt
gaatattatAAGAAATCTTTGCTTTGTCGGAAAAATCTTAGAGGNATTCC
GTAACTTTTTATTCTGAATATTCTAAGAAATCTTTGCTTTGTCGGAAAAA
TCTTAGAGAATAAATACACAGATTGCAAagttaaagtctgaagacaaatc
acgcttttattcgaaatttttatgtgcttgttacatgacatttatttctg
attggttcgaatttattgacactactaaagttatcagctgtaagtcgtaa
agcaagtaacatgggaataaaatcacatgaactttttcgagtaatcgcat
gttttgactgcattgatataattttgcaacccgggTGTATTTGTTTAACT
TTCCACTTTTTCTCATACTAGTCTTCATGGTCGTAGTATTCAAAATAAAG
TATCTTTTATGCTGAGATCATGTTCACGGTTCCGTTTTGCTCCAAAActa
aatgaagccattctaatGGTTATattcaagtgttacgtcacttctcacca
atagaatggcttcattccgtTTTTGAGCGAAACTGAACCGTCACATGCGA
ACATGGTCTTGTACTACgtatgttttttttatgttttattctAATATAAT
ATTTATCAAGGTTAAAATTTGGAATACTAGATTTAAGAAAATAACGTTTA
ATCCTGAATTTTAAGAAATTCGTGTAAAGAGAAATTAGGTTTAATACAAT
TTTTGTagtttcaaaatataaaagatgaaaaagtttaC
Run BLAST on NCBI

transcript from alignment at scaffold_423:19052..28333-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064764 ID=TCONS_00064764|Name=TCONS_00064764|organism=Clytia hemisphaerica|type=transcript|length=9282bp|location=Sequence derived from alignment at scaffold_423:19052..28333- (Clytia hemisphaerica)
CAGGTGATTAAAAAAATAGTAAAACATAAAATTATCTATGAAAATTGCTA
TGTTTTGAAGCTCTTGGCCAACTATTATATTGCAAAATGTTTCTTTTGGA
AGAAGTAAGAGAGCATGATACAAACAAACAATGGAACCCAATGTTTCAAG
TAAGTCAATACATCGCTATGTGGCACAATAATAAGTTCCTGCTATTGTAT
GTATAAAGGCTTTTCATTTTTCTGATTAATTTATTTACTGTTTGCTCATT
GATTTTTGATTCATGAAGTCTTTTATTTTTGTTGTCAAAAATTTTCATCC
CTCTCTAGGTCAAGCAATATGGGTTAGTTAAAAAAAAGTTATTTAAGCTA
GGCTGTGTAGATGTCATTTTTTGAATAGTTAAGCTGTAAGTAAAAAGGAC
GATACCCTTATAATATAACCTACTAAGTATCCTCCTTCCACCTTTTTATA
GTTAAAGTAGTATTTCTTAATTTCAATCCCTTGCAAAAATGTTTTTGAAT
ACTTTACCATATAGATGATGCATTTGGAGACAAGTCAGCAAATTGAACAC
AAAACATTGAAAGCAGCTAAAGCCCCACAAAACCGTTCACTCAATCGATA
TAGAGATGTTTTACCATGTAAGTTTATCATCTTTAATACATATCAATGAG
AAAATAATGATATAGTGCGAGATAACCCGCAGTTATCATAACATTGAATA
AGCCTCCATAACATAAATTTCACTGCAATAATTTTAAAGGTAGGGCATTA
GAACCCACTGACAGCCGAAGAAGACACCTCTATCTCCCAGTGGTCAGCCT
TTCTAATTCAGATTAACCTGCGTCGGCAAAAATTTCTGGGTTCTATAGTA
CAGTAAGCACTTTCATGTCGGCAAAAGCCAAATTTACGTCAGCATTTGCG
TCGACATAGCCAAATGCCGACGCGAATTAGAATGGCTGGTGGTAGTCGCC
TCAAAGAGGCAGTTTTGAAGTTGGAAAGGGTCAGATATAACCACAAGCTA
ATGGAAAGAAAACGGTCCACCACATTTCTTTTGTTTCAGACGATGACACA
AGAGTACATCTAAAGACAGGAAACACTGACTATATCAATGCTAATTATGT
TGAGGTATATTTATTTATTGGATAATAATTAGATACCCAGATAAAATTCT
GATTCTACATTTTAAATAGAAATGAAATGAACTGAAATAAAAATAATCAA
CAACAACTTTCTAAGACATCACTGGACATTCTAAGAATACTAAAGAAAGC
TCCCTAATGTTGCATTTACTTTTATTAGGATGTGTTTCATGGGCAATCAT
GACTATTCCTGAACCTTCATGAAAATTTTTGAACTTTTTAAAATGTTTGC
AAATTCTCCTTTTGAGTTAACTTTAACTTTTGGACCCAAAAGATCATTTG
TGAGCATTCAACGTTCTGGAATGTTCCTGACTTTAGTAACTTAAAGGGGA
ACCATTCAAGAAGGTTTGGGAAGCACAAATACTTTCCTTTAGATTTGATT
TGATTCTAGACCCAACCAACCAATAAAATCTTCTTTCAATTTAGGTTTCA
GACGTTGACAGAAAATACATTTTGGCACAGGTTAGGATCCTTCAAGTTTT
GGTATTATCATTATCTTTTAAAAACAAAAAGGCCTTTTGTCATATGGACG
GTAGTTATTTTTACTGATTTAAAAAAAAAATTATTTTAATTAAAAGTAAT
TGATACCATCTTTTCACCTTTCTTGTTTTTAATATCTCATTTTAAGGGTC
CACTTCAAAATACATCTGGAGATTTTTGGCGGATGATTTGGGAAAATGAT
AGTACATCAGTCATCATGCTTTGTCGTATTGTTGAGAAGCAAATGGTTTG
TATGACGTGTCCTCGTTGAAATATTTGACTCTCTCCTCAAAAAGAATACT
TTCCTGGTAAAATTCCAAGCATTTTAGTCACTGGCGTTTTTTGGATTAGA
ACTTGAGTTTTGACCAACTGAGTAACCACCATAAGTGGTCGATGCCTGTC
AAAGGCCCTCGAAACTTGTTAGAGACATCCCTTAACCTTTCATGAAACAT
TTATTTTCAAGGAATTTTAATCATAAAGAGAAAATAATTCTGACATTGCT
CACCATATACATATTATTTTCAACATTTTTTGATACATAGATGGAATTTT
TCAAATATTAATATTCAAAAAAGTGCTTGGAATTTTCACCGCTTTCCTAA
ATCAATTCTACTAAGGGGATTCTAATTTAAAAATTTATAACGTCCGACTT
TACAATAATGTCAAGAAGTTGAACTCATTAATGTTTTTTTTTCTACAGAT
AAAATGTCATCCATATTGGCCAATGGGTGAGGATGAAGTTGTAGAATTTG
GAAGCTTCCAAATTCAAAATGTACAGACGGTCATGAAACAACACTATGTC
ATCAGAGATTTACAATTGACTTATGTCTTGGTAACAGAATTAGATAATTT
CTTTTTTCATTTGATTCATATTATGACCACTATTATAGCAGATTTTAGAA
TAAGGAACTGTACCCATTATGGTTTCTTTTAATTTTTAAATAACATTAAG
TGGATTTTTAAAATGTTATGCCGAAGTTTACGGACATTGTTATCTATCTA
ATGAAACTTTCTAAAATTTTCCTGCGTGAATTTTTATACAAATTGCTAAT
CCTTGTCTTGGGTTTTACTTAGAATATCTGCCAAAATCCTTCAGCCTTAT
TCTCGAAAAAAGAAAGGTTTTTTAAATTTTGATTCTGTGAAACTCCCATC
AATGATCTTAGAAGATTTCCACAATAAACCTGGAGGATTTTGGCTGATTT
TCTAAGTAAAACTCATACAAAAGGATTAACAATTTGTATAGAAATTCACA
CAGGAAAGTTTTAGAAAGTTTTATTAGATAGATATTAGAAGCTTATTCTT
TCCCTATTTTTAGACGGGAGAAACGAAATCTATAAAGCAATACCATTTTA
TGACTTGGCCCGATTTTGGTGTACCAGATGATGCAAATTCGTTTGTTGAA
TTTCTCAATACGTTAAGGAAGGATGATGTTTTTCAAAATCAAAGACCACC
TGTTATACATTGCAGGTGAACTTTCAGAATTGTCCCCCATTAGTGGCAAA
GGAGTTTAGTGATTATCGCGCTCAACTCCCTACTGAACGTAGATTTTGCT
TTGGTTGACCAGAGAAACATTAAGAGACCGTTAAGCCCTCTGACGAGAGC
ATCAGCACTTATTTAGACAAGAAGCCGAAACGACACAAAGGCCCAGCAAC
ATAGCAATAAGTCGAATGTTTGCTCACGCGTACATTCTGTGCTTATTTTT
AATAGGCATCGTCTTTCCCAAAATATTAACTTATTAAACTGTAAAATGAC
TATCTGTTCTCTCAAACTGCTTATTCCTCTTTCAGTGCTGGTATTGGACG
TTCAGGAACGTTAATTTTGGTGGATGCTGCCCTTAAACTGGTAAGAACAT
CTTCTCCCTTTTGTTCGAAAGAGATGTTTTATACAACAGTAATATGAAAA
TAACTTTTTCGTTGTTTCACCTTGACAATGTTAAGTATGACAATCAAAAT
GCTCTTAATAACCCTATTTTTACCAGGCTTTCAGGGATGGTTCAAAACTA
GGGGCTGATGACTGATGACGTCACTCATCATGCCAAAAGTTAGCAAAAAT
CGAAAATTTCCTTTGTTCTTATAAATAGCTTTTGTTTTCTAACAAAAAGG
CTTTAGAAAAAAGTACCATTAGTCTAAAATTGGAAATGTGTCAATTTTTG
TGACACCTTTTACTGTCAGAAATGTCATCATGCTCAATGTGTAGAAATCT
TTTAGATATCAATTTTTTTTTATTTGAAGCAAAAAAAAGTTACGAATTTA
CAGAAAATTCATACTAAAAGGTCAATTATTTCAGAAGTTAATAACATAAG
GTTCACTGTCGAACAAAAACAGCCCCCCCCCCCTAGTACACATAGGATTA
ATATAAATTCTTAAATTTTTCCATTAATTAATTTCAAATTGAATTTTGTA
ACCTAAGTTTTGCTTTGTTCATCTTGAAAGCTCTAGTTGAACAATTTTCT
ACCAAGTTCAATCAACAAGGGTGTAAATTTCCGTTGTCTAAAAAGATAGA
GCTAAGTACCTTTCTTTCTTTGGTTTAGTGTGAGGATAAGAACAGTCCAA
ATTCGTTAGACGTGAGAAAGATGTTGCTAGCATTGCGTCAATTTCGTTGT
GGCTTGGTTCAAACACCTCAACAGTTCCGATTCGCTCACTTGGCAATATT
GACAGGTCTCCATGATAAGTTCCCTTCACTGTTCAGTGATGTTCCCAAAG
AAATTGGTAAGAAAAAGTGTAATTCTGTTAATAGGCCTTATTGAATGAGA
GTTAGGATTGGATCCTTTGTGATGCCATATTTATAGAAAGTTTCTTTAAC
ACATTTCAGTGAAAATCTATTTACCCTGGCCTTGAAAACTATCCATTCTT
CGACACAGCAAACTTTTGAGCTGATTGTCTAAAGCAAAGCAATGTCACCG
AAATTAAAAGTTGATCTTTTAACAAAAAACTTTGAATATTTTGGTTTAAA
GCAGATCATCACATTGACCGTCCCTAGTGGAGAAGGAGAGTGGTGTTTTC
AAATTTAAAAACTTTTGGCCGAGAGAGACAAAATTAGGCTTTTCCAGGAA
TAGTCCGTGCCCTCTGTTGAGGATATTGGATATCCAGGGGGTTAACGATT
TTTGTTCAAAAGTGGATATCCAGGGGGTTAAGTATCTACAAGGAAGCGGA
TATCCAGGGGGTAAAGGTTGAGCATATTTTTAACAGTGGATATCCAGAAG
GTCTTCACTAATAAAGTATGATATCCAGGGGGTTCGATACTTCGAAAAAT
CAATATACTCAACAGTGGGGGTAAAATTTTTTCTGAAAAAGCCATGGTTT
TCACTTATTGTCTGCTTTTGTATAGAAAGATATGATTTTCCTTTTTTAGA
AGAGGGTGATGAGGATGAAGCAGAGCCACCAGCCTTACCAGAAAAATCGA
AACATAACAAAGTACCGCCCAAAAAACCACCACGTGCCTCGAACGCCACC
AACACGCCCACCCCTGAGGATGACGTCCGTAAATATAATCAAATCACGGG
TAACTTTTCGATTCTTTTAATCTTCCCAGATCTACTAGAGTCAGAAGAGT
TCAACTAAAAGTTATGTGATAGCCGTCGCAGTCGTGTATTAAAAACAATT
TTTACTTCGATAAGCTTATTCGCGTTTCATTCAGCTTGATCTTCCTTATT
TCGAAAAATTAGTGTAATAGATCATCATTGGTTGCTTACAAACTTTGAAA
ACCCCCACATTTGACCGTTTTAACGGTAGTGTTATTCAGTTTTAGCGGTT
TTAGAAATCTGAATCGTTAGATCTGAAAAGTTCGCTATTTGCTTTCACTT
CTGGTCGACCAGGGTCGACGTTTTGAAATTGAAAGGCTCGGAAAAATGTT
GTAAAACAGGAAACAAAATGGCGTACTAGTTCTTAGCTGGCTCTTAAACT
TTAGTCACACTTTCACGGTAAATCTGTAAACAAGTTATCCTAATGTGTAA
AAGAAAACGATAACCTGTAAAATTCGACACAATAGATTTAGAATCATCTG
ATGGTAGTGGTGAAGATGAAGTGATCGATCTTTCTGAAGTTTCTGACGAC
AATGAGGAGGACGAAGATGCCACACCAGATTCACTAATAGATTCCCAAGA
ACAACCACAACAAAGCAATGGTGTGGTCGAATCCAATGGAGATGATGAAG
ATTACCAGGAATTGGATTTGACAGGTAAAGATTCAGAGGAGGATGATAAC
GAAGTTTACCAAGAATTAGATTTGACCAAAGTTGATCAGAACAATACTGG
TAAGACAGACACATCAGAATCACAATCTAATATGGAGAAAGATGATAAAG
TGTCTGATTTACCAGAATCTTCAACTACTGCGCCAACAACCACTGATAAA
GATTCGCCCTTACCTGAACCACCAATTCAACAAAAATCTGAGATTTCGAC
AGCTGCTGGATCCAAGGCAAGGTATTTACTTTATTGTTTCATCTTCTCTT
TTTTCCCGAGCAAAGATCTGAAAAATGTTTACCTATGTATATATTTGTAT
GCATTCCTAGATATGTCTGTCTATTCTTCTTTTTGAAATATTTTAAACGA
ATTTATCATTGAAAGATTTATTTCCAATTTGATATGATTCTGATTCAAGA
ATTGTTTACTTACAAATTGTTATCAGTTGAATGAGATGCTAGGCAATTCG
ATCTGCCTAGCCAGGGTGCAATATGCAGTCCTGACGAGTCCTAACGAGTC
CTAATAAGGACGAAATGTGTATGTTGCTCTGCCACCCAAATCTCCTTCTT
CACGTTCTTCACACATATAATTTTATTTTCTACAGAGAAAACGAGTTGCG
GCAGAGGGAGAGGAGCGAGAAGAAAGAAGCCACACAAGAACTCATAAACA
ACATAAAACAACGGATGAAGGATAGCGAGAACAAGGCGAAGAAGGGAGCT
TTTGAGAACAGTACAACGCTACTATATGTCGGTGTCGCTATTGTCGTCAC
CTCTTGTGTCGTCTTGGCATACAAATGGTTAAGTTGAAGAAATCGTCTTT
TTACGAAATGGAGAGATTTTGGGAAAGTGTCTTCTACCGTATTTTGCCTT
CCTTTCTTCTCCACCACCACGCTGAACAGTGTTAGTTTTTTTTCTACTGT
AGTGTGATTCTAGAGCTGCTGTTTGGTCGTTATGGTGAGTTTAATGATGT
TAAAAGTCTTTTCGATAATGGATTGTAGGTGTCAACGACAAAAACAAGAC
TTTGGCTGCTTGGAAATGAAGACAAATTTAGAAACGATCCACCCTCTCTG
CTTCACTAATACGTACTGCACCCTTCTTTAAAATAATCAAAAAATGAATT
AAGCTTGACCGGGTGCTTTACCATCAACCTACTCACCACACCCCTTGTGT
ATCTATAATCTATTTCATTTACGCCACCGATATCCTCATTATTCACAATA
CCTAAAATGAAAAATTTCAATCCCCCCTACACTTTTAACAACCCACATTT
TGCTCCACAAAATATTTAATTACACCCCACCAAGATTCCCTTACGGGTAA
GAACATTCGCACTAAAAATTGCCTAAAATTTATTAATCCAAGGGGACATC
ATGTACAAAGGGACACGTTTCAGAAGTGAGTGTGTATATACAGAGACATA
TTATGAGCGAATGTTAAAATGTTAATTTTAAATAGTTTAGCATTGTTAGC
ATAACATAGTATACGTTTTTTTATAAGAACAAACTATATAGGAACATAAG
TTTTTGCTGACCAAAATGTTAAGAACATTTGAAGGCTTTGTGGACTCAAA
AACACCCCATTTCTTATGAAAATGGTCAAAAATATTCACAAAATTGTCAA
AATAAGAACATGTTAAGAACATTGTTAGGCTTAAATGATGTTCTTACAAA
AAAATCGTGTACTGTGCTTTTTGGATATTTTAACTAATAGAACCCTATTG
CTTTATAAATGGGAATGAAGATTTATTTTATAGAGTTATATAATTATAAT
TTTGTTATTAATATAGGGAGTGTTTGTTTTGTTACTAATGATCTCCAGCA
TTGATTCGTATTAGATTTTTCTCTCCAGAACGTAGATAGACCTTTTCATA
ATTACGTCACGAACATCACTTGCCTCGTATTCAAACAATTACCATGGTGA
TTATGTCCCTTGAGACATTAAATTATTTTTTTATGAATAGAAAGTAGTTT
TGATAAAATTTGCTGGGATTTAATCACTATGGCAATAATTTCAAAACGAT
GCAAGTGATGTTCGTGACGTAATTTATGAGAAGTTTCGTAGCAATTAATC
ATCATCATGTTATTTTTGTCTCCTTTAAACAATTATAATGATGAAGCTTC
TGAAATGGTTGAAAACACAGAACGTATTATAGGGAAGCAATCAAGGGGCA
TTTATTAGAATTTTTGTCTGCAAAACAATCTTAATGAGCCCTGAGTGCAA
AATATAGTCAATCCTCTTTTATTACCTCAACTCGTAACTCGAATCTTTGT
GTAATTTGAAAACCGAACTTCAAGTCAATTGATGTCTCATTAGATAGATA
GATATGAGCCCATCGAATGCATCCGGGATGGGTCCTACCCACGAAGGATT
GGGTATCGATCTCGGGCCTCCCAGGCGGGAGTCGAGGAGGATAACCACTA
TGCCACTACGCCTTTTGATGTCTCTTCATTTTTATGTATATTTCACTAAC
GCGTCATTTTATTGTTTTGTCGTTTCAACAGTTTTTTTATATTCATGATA
GCTTTATTCCCCATTTACATTGTAACATTTTTTTTATACTTTATGACACG
GTTCTCATAAAAAAGCATTTTTATTTTTTATGTTAAAACTATTTTACTGG
TCCTTTTGTTATGTTAATCTAAGAATTTTTCTGTTTTTCTAAAATTTTTG
TTGATTTGGTTTTAACGACAGTTCTCAGGCATTTGGATGGAAGAGAAGGA
GCCTTACGCTCGGGACAAAGAAGATATTCCGTAACTTTTTTTTTGAATAT
TATAAGAAATCTTTGCTTTGTCGGAAAAATCTTAGAGGNATTCCGTAACT
TTTTATTCTGAATATTCTAAGAAATCTTTGCTTTGTCGGAAAAATCTTAG
AGAATAAATACACAGATTGCAAAGTTAAAGTCTGAAGACAAATCACGCTT
TTATTCGAAATTTTTATGTGCTTGTTACATGACATTTATTTCTGATTGGT
TCGAATTTATTGACACTACTAAAGTTATCAGCTGTAAGTCGTAAAGCAAG
TAACATGGGAATAAAATCACATGAACTTTTTCGAGTAATCGCATGTTTTG
ACTGCATTGATATAATTTTGCAACCCGGGTGTATTTGTTTAACTTTCCAC
TTTTTCTCATACTAGTCTTCATGGTCGTAGTATTCAAAATAAAGTATCTT
TTATGCTGAGATCATGTTCACGGTTCCGTTTTGCTCCAAAACTAAATGAA
GCCATTCTAATGGTTATATTCAAGTGTTACGTCACTTCTCACCAATAGAA
TGGCTTCATTCCGTTTTTGAGCGAAACTGAACCGTCACATGCGAACATGG
TCTTGTACTACGTATGTTTTTTTTATGTTTTATTCTAATATAATATTTAT
CAAGGTTAAAATTTGGAATACTAGATTTAAGAAAATAACGTTTAATCCTG
AATTTTAAGAAATTCGTGTAAAGAGAAATTAGGTTTAATACAATTTTTGT
AGTTTCAAAATATAAAAGATGAAAAAGTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040614XLOC_040614Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064764-exon-scaffold_423-1575043694:28185..28333TCONS_00064764-exon-scaffold_423-1575043694:28185..28333Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:27717..27819TCONS_00064764-exon-scaffold_423-1575043694:27717..27819Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:27230..27294TCONS_00064764-exon-scaffold_423-1575043694:27230..27294Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:26754..26789TCONS_00064764-exon-scaffold_423-1575043694:26754..26789Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:26489..26587TCONS_00064764-exon-scaffold_423-1575043694:26489..26587Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:25904..26035TCONS_00064764-exon-scaffold_423-1575043694:25904..26035Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:25269..25420TCONS_00064764-exon-scaffold_423-1575043694:25269..25420Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:24894..24948TCONS_00064764-exon-scaffold_423-1575043694:24894..24948Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:24028..24205TCONS_00064764-exon-scaffold_423-1575043694:24028..24205Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:22313..23384TCONS_00064764-exon-scaffold_423-1575043694:22313..23384Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1575043694:19052..21948TCONS_00064764-exon-scaffold_423-1575043694:19052..21948Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:28185..28333TCONS_00064764-exon-scaffold_423-1510915933:28185..28333Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:27717..27819TCONS_00064764-exon-scaffold_423-1510915933:27717..27819Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:27230..27294TCONS_00064764-exon-scaffold_423-1510915933:27230..27294Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:26754..26789TCONS_00064764-exon-scaffold_423-1510915933:26754..26789Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:26489..26587TCONS_00064764-exon-scaffold_423-1510915933:26489..26587Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:25904..26035TCONS_00064764-exon-scaffold_423-1510915933:25904..26035Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:25269..25420TCONS_00064764-exon-scaffold_423-1510915933:25269..25420Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:24894..24948TCONS_00064764-exon-scaffold_423-1510915933:24894..24948Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:24028..24205TCONS_00064764-exon-scaffold_423-1510915933:24028..24205Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:22313..23384TCONS_00064764-exon-scaffold_423-1510915933:22313..23384Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1510915933:19052..21948TCONS_00064764-exon-scaffold_423-1510915933:19052..21948Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:28185..28333TCONS_00064764-exon-scaffold_423-1491911889:28185..28333Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:27717..27819TCONS_00064764-exon-scaffold_423-1491911889:27717..27819Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:27230..27294TCONS_00064764-exon-scaffold_423-1491911889:27230..27294Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:26754..26789TCONS_00064764-exon-scaffold_423-1491911889:26754..26789Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:26489..26587TCONS_00064764-exon-scaffold_423-1491911889:26489..26587Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:25904..26035TCONS_00064764-exon-scaffold_423-1491911889:25904..26035Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:25269..25420TCONS_00064764-exon-scaffold_423-1491911889:25269..25420Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:24894..24948TCONS_00064764-exon-scaffold_423-1491911889:24894..24948Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:24028..24205TCONS_00064764-exon-scaffold_423-1491911889:24028..24205Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:22313..23384TCONS_00064764-exon-scaffold_423-1491911889:22313..23384Clytia hemisphaericaexon
TCONS_00064764-exon-scaffold_423-1491911889:19052..21948TCONS_00064764-exon-scaffold_423-1491911889:19052..21948Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_423supercontigscaffold_423:19052..28333 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.114637	0.0842414	0.160074	0.177322	1.21707	0.705291	0.899967	1.32925	0.701312	0.321507	0.325076	0.908527	0.465355	0.803227	0.376665	0.459708	0.301588	0.838585	0.11932	0.42218	1.00724	0.24167	0.0700567	0.267075	0.596675	1.16482	0.267127	0.272769	0.0576127	0.368011
Blast
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BLAST of TCONS_00064764 vs. Swiss-Prot (Human)
Match: PTN2 (Tyrosine-protein phosphatase non-receptor type 2 OS=Homo sapiens GN=PTPN2 PE=1 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 2.794e-70
Identity = 120/276 (43.48%), Postives = 176/276 (63.77%), Query Frame = 3 
Query:  102 EVREHDTNKQWNPMFQMMHLETSQQIEHKTLKAAKAPQNRSLNRYRDVLPYDDTRVHLKTGNTDYINANYVEVSDVDRKYILAQGPLQNTSGDFWRMIWENDSTSVIMLCRIVEKQMIKCHPYWPMGEDEVV--EFGSFQIQNVQTVMKQHYVIRDLQLTYVLTGETKSIKQYHFMTWPDFGVPDDANSFVEFLNTLRKDDVFQ-NQRPPVIHCSAGIGRSGTLILVDAALKLCEDKNSPNSLDVRKMLLALRQFRCGLVQTPQQFRFAHLAILTG 920
            E  E DT ++W P++    LE   +      + AK P+NR+ NRYRDV PYD +RV L+    DYINA+ V++ +  R YIL QGPL NT   FW M+W+  + +V+ML RIVEK+ +KC  YWP  + E++  E G F ++ +   +K +Y +  LQL  + +GET++I  +H+ TWPDFGVP+   SF+ FL  +R+      +  P VIHCSAGIGRSGT  LVD  L L E     + ++++++LL +R++R GL+QTP Q RF+++AI+ G
Sbjct:    8 EFEELDTQRRWQPLY----LEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETG-FSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLME---KGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEG 275
The following BLAST results are available for this feature:
BLAST of TCONS_00064764 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTN22.794e-7043.48Tyrosine-protein phosphatase non-receptor type 2 O... [more]
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