|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064756 ID=TCONS_00064756|Name=TCONS_00064756|organism=Clytia hemisphaerica|type=transcript|length=808bp
CAATTTTTGCCACAATCATGGGTCTGATGATCCTTGAGTTTATCATTTCC
ATGACCATCTCAATCACTTGCTGCCGAAACTCAGGTTGTTGTTGTCGATC
AAATACCTCAGGAGCATTGGTTATGAACGAGCACCCAACTCCTACTGATC
TCGTCTCACCTAATGGTGTTGTCGTTTCTGGTCAATGTCAATACCCTGGT
CAACAAACCGTTTACCCACCACAATCTGCTGCAGGCTACCCACCCCAATC
ACAAGTCATCTACCCTGCTGGCGTCTATCCAAATCACAAACAATGTTTTA
CAACCACAGCGCATATGGGAGGTGTTCAGAATCTTGCTTATTCTAACCAG
ATGACACATGCCCAACTACCTCTATATGCAAAGTAGGTTGTTTCGAAGTT
TTGTTCAATGGAAAGGTCTACCACTTCAAGTACCTGACAACATATTCCAA
TATTTCTGGTGACCGACCTCgaacaaaaaaaacttaaaaatgtaGAAACA
GAAACCAGTAAAATAAGCAACTGCTAGTAAAATAACCCAATAAACAAACG
CAGTTTGGTAATGTATCCCAAcgaaagttttatataattgtTATCATATC
ATTTGTATTTAAATACCCTTTTCTCACTTTGtagttaaatttttttaatg
ggGTAGCTTTCTATCCGTATGTATGATTAAATAAATGACCAATGTAACCT
AGTTTGGTTTGTATCAAACCATATATCGTTTATAGACTCTAGTCTAAGTC
GCTGAGCTCTAGGTAGTGGTCTGTAAGGAGCATTCACAAATCTGTTAGAG
GTTGCCAG Run BLAST on NCBI transcript from alignment at scaffold_423:359807..361086+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064756 ID=TCONS_00064756|Name=TCONS_00064756|organism=Clytia hemisphaerica|type=transcript|length=1280bp|location=Sequence derived from alignment at scaffold_423:359807..361086+ (Clytia hemisphaerica)
CAATTTTTGCCACAATCATGGGTCTGATGATCCTTGAGTTTATCATTTCC
ATGACCATCTCAATCACTTGCTGCCGAAACTCAGGTTGTTGTTGTCGATC
AAATACCTCAGGAGGTGAGTAAATGGGCATTCATTTGCAACATAACCACA
TTACTGTCTGTAGTACCTGGGCGAGCACTCAAATCAAGAAACAGTATATG
CAGGCAAAAATCAGGGTCTCGAAATTGAACCctttgaaagtgaaaattta
gccaaatttgggtaaatttgggtgaaaaatcGACTCTTCCAGTTTCTtgg
aattttttgttcattttacgACAAAAGATGGTGAGGGGGTCAGATTTCCC
AAAATCTCCGTTGttctcactttttacacccttagacTGCTCGTTTCGGT
CCTTACAGTGCATTCTAGAAAGCCTGAAAAACGCGCGTACGTNCTCCGTT
GttctcactttttacacccCCTTAGACTGCTCGTTTCGGTCCTTACAGTG
CATTCTAGAAAGCCTGAAAACGTACCCTTGGGCTCATAAAGCACTGTAAA
GTTCAATTATGAAACATTTTAATGTTGTCATTTAAGCATTGGTTATGAAC
GAGCACCCAACTCCTACTGATCTCGTCTCACCTAATGGTGTTGTCGTTTC
TGGTCAATGTCAATACCCTGGTCAACAAACCGTTTACCCACCACAATCTG
CTGCAGGCTACCCACCCCAATCACAAGTCATCTACCCTGCTGGCGTCTAT
CCAAATCACAAACAATGTTTTACAACCACAGCGCATATGGGAGGTGTTCA
GAATCTTGCTTATTCTAACCAGATGACACATGCCCAACTACCTCTATATG
CAAAGTAGGTTGTTTCGAAGTTTTGTTCAATGGAAAGGTCTACCACTTCA
AGTACCTGACAACATATTCCAATATTTCTGGTGACCGACCTCgaacaaaa
aaaacttaaaaatgtaGAAACAGAAACCAGTAAAATAAGCAACTGCTAGT
AAAATAACCCAATAAACAAACGCAGTTTGGTAATGTATCCCAAcgaaagt
tttatataattgtTATCATATCATTTGTATTTAAATACCCTTTTCTCACT
TTGtagttaaatttttttaatgggGTAGCTTTCTATCCGTATGTATGATT
AAATAAATGACCAATGTAACCTAGTTTGGTTTGTATCAAACCATATATCG
TTTATAGACTCTAGTCTAAGTCGCTGAGCTCTAGGTAGTGGTCTGTAAGG
AGCATTCACAAATCTGTTAGAGGTTGCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064756-exon-scaffold_423-1491911889:359807..359920 | TCONS_00064756-exon-scaffold_423-1491911889:359807..359920 | Clytia hemisphaerica | exon |
| TCONS_00064756-exon-scaffold_423-1510915933:359807..359920 | TCONS_00064756-exon-scaffold_423-1510915933:359807..359920 | Clytia hemisphaerica | exon |
| TCONS_00064756-exon-scaffold_423-1575043694:359807..359920 | TCONS_00064756-exon-scaffold_423-1575043694:359807..359920 | Clytia hemisphaerica | exon |
| TCONS_00064756-exon-scaffold_423-1491911889:360393..361086 | TCONS_00064756-exon-scaffold_423-1491911889:360393..361086 | Clytia hemisphaerica | exon |
| TCONS_00064756-exon-scaffold_423-1510915933:360393..361086 | TCONS_00064756-exon-scaffold_423-1510915933:360393..361086 | Clytia hemisphaerica | exon |
| TCONS_00064756-exon-scaffold_423-1575043694:360393..361086 | TCONS_00064756-exon-scaffold_423-1575043694:360393..361086 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_423 | supercontig | scaffold_423:359807..361086 + |
Blast
The following BLAST results are available for this feature:
|
