TCONS_00064708 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064708
Unique NameTCONS_00064708
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064708 ID=TCONS_00064708|Name=TCONS_00064708|organism=Clytia hemisphaerica|type=transcript|length=165bp
ttatttttcaactactCTGAGTCCTGGTCTTTTCCTGCTAGAAAAGTgac
aaaggaatcttagtgcggaaatgggaaacttatacaaaacgacggtaaTA
CGGAAACGCTAGTATCACACTCAAACTCAATTTTTCCACACCAAAGATTT
TCCCTTTTTattctt
Run BLAST on NCBI

transcript from alignment at scaffold_421:93738..93902

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064708 ID=TCONS_00064708|Name=TCONS_00064708|organism=Clytia hemisphaerica|type=transcript|length=165bp|location=Sequence derived from alignment at scaffold_421:93738..93902 (Clytia hemisphaerica)
aagaatAAAAAGGGAAAATCTTTGGTGTGGAAAAATTGAGTTTGAGTGTG
ATACTAGCGTTTCCGTAttaccgtcgttttgtataagtttcccatttccg
cactaagattcctttgtcACTTTTCTAGCAGGAAAAGACCAGGACTCAGa
gtagttgaaaaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040589XLOC_040589Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064708-exon-scaffold_421-1491911889:93738..93902TCONS_00064708-exon-scaffold_421-1491911889:93738..93902Clytia hemisphaericaexon
TCONS_00064708-exon-scaffold_421-1510915933:93738..93902TCONS_00064708-exon-scaffold_421-1510915933:93738..93902Clytia hemisphaericaexon
TCONS_00064708-exon-scaffold_421-1575043694:93738..93902TCONS_00064708-exon-scaffold_421-1575043694:93738..93902Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_421supercontigscaffold_421:93738..93902 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064708 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top