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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064701 ID=TCONS_00064701|Name=TCONS_00064701|organism=Clytia hemisphaerica|type=transcript|length=2158bp
attttttatcttttcaatataccgcaaaaagaaacttttcgtttaatttt
ttttacaacttcattttcaaattttgaaaaatatatttatccTCATGTTA
ACTTATCAATCCTTATCTTTATTAAAATGTTcaagttttgtaatttttag
tttattttctttatgaAGAAGTTTTCAATCTGATAATTTACTAGGACCCA
GGGTGCACTTAGATGAAATGCATGATGGGTCTGGCGAGCCATAAAAAGTA
ATCATTTAGTCTCTAGGGTTTTATAAtacacccctatctcacagccccga
tggaacttttttcctcagtggagataaaatttctattgaaatcccaatag
ggatagaaattccATTGTTCCAATGTTAGAAAACCCAGTGGGATGTTTTG
AGAATTCaatttaaacattgaatttcgagtgtgTATTAactcaaagtcaa
tttccaagtggggcCGAAATCCCAGGGTATTTtctcaccggggacgaaat
tattgccaaattttccagtgggggtGGGTTCCCAATGGGtttgtgaaaca
ggggtgttataattaagaatttaagaACTGATCCCTCAAAGgttcataaa
ttcttgaaatgggcttttccagaaaaaaaccgtacaccccctgttgaaga
gctccaaccttttgtgaactacccccttggaattccaggaaattttagga
tcatacccctctggaattccgaattttgaTAAATTCGGCTTAATTTTGAC
CAATATTTGATGATATAGGTTGATATTTCTGAAGTTTTGCCTACCCATCC
TCTCGGTAACGTAGTACCTTCATAGTTTGATGGTTATCTACTTTCGTTTT
TAGCCAAGTCTATTGCAATTCCAAGTGTAGtccttttaaagaattttaca
ttTAATTTTATCAAAGCTTCTTTCTGGGTCTTGAATGAACAGAATATTTT
CACAGCTTAATTCCTATCCCACAATAATAATGTCATGACAAGGGAGCACC
ATGCTCTATCAAATCTAATACCCCCTTAACTTTTCCAATTTGACAGTTAA
TTTGTTCAAAAACCATTCCAGGCTTAGGATTGTTcctaaattattcttat
aatttggcattttgagcctcgttACTCTTATGAAattatccttataaaaa
agacttttcctCAACCTATAATGATCATTACAGcatgtaaaaaccaaaaa
actacACGCTTTGTATCCAGATTGATTTGACGCTGTGTtaaatttttgca
tattttaattctaaaaaaataCACTATATTTAGGCTaaatgccatttttt
tctaaatattacTATTTGGTTGATTGCAATGAtacaaagtttatttttca
aatcaaacgTCTTTCTTTTGGATAGTTTTCATTTGCCTGGTCAAGTGTTC
TTCATGTTTCCTTTGATGGTGGTCTTTGATTTCCTTCTTTCTGCGACCAC
CCCAACGGTAGTTCACTTCGATTTTTGCCTCCCCAACGGCCCGGTATTTC
ACTTCGCTTTTTGCCTCCCCAACGGCCCGGTATTTCACTTCGCTTTTTAC
CTCCCCAATGGCCTGGTAATTCACTTCGCTTTTTGCCTCCCCAATGGCCT
GGTAACTCACTTCTCTTTTTGCCTCCCCAACGGCCCGGTAATTCACCTCT
CTTTTTGCCTCCCCAACGACCCGGTAATTCACCTCTTTTACGACCACCCC
AACGACCAGGGGGTCCTACTCGTCGCATTCCTCTCTTCCGTCCACCCCAC
CGACCAGGGGGTCCATCAATACCAGCCTCTCTTTTACCACATCCCCAACG
ACAAGGTGGACCCTCAAATTTACCAACTCCACTGTTTTCGGTACCTTGTT
CCTTTTCTTGTCTTCCGTAAAGTGAATTATCCGTACCATCAGCAGCCCGG
TCAAAAGTGTCATCGGAATTCGCTATATCTGATCCCCCACCAGtactttt
tttcgaaacatctttgattttcatagGATGAGCTGATTTCTTTACCAAAG
TTTTTCCATGGTCAGCCATTTTCACGGTGTTATCTATCAAATTCTTCTTA
TTCCTAACATGTTGTTTATTTGGCATCCCATTGGTCAAACAAAGACACGT
GATTCCGAGTAGAAAGAGATTTGTCCATGAACAAAATCTCATCTTGAAAG
CGACCTAA Run BLAST on NCBI transcript from alignment at scaffold_421:66990..69220- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064701 ID=TCONS_00064701|Name=TCONS_00064701|organism=Clytia hemisphaerica|type=transcript|length=2231bp|location=Sequence derived from alignment at scaffold_421:66990..69220- (Clytia hemisphaerica)
ATTTTTTATCTTTTCAATATACCGCAAAAAGAAACTTTTCGTTTAATTTT
TTTTACAACTTCATTTTCAAATTTTGAAAAATATATTTATCCTCATGTTA
ACTTATCAATCCTTATCTTTATTAAAATGTTCAAGTTTTGTAATTTTTAG
TTTATTTTCTTTATGAAGAAGTTTTCAATCTGATAATTTACTAGGACCCA
GGGTGCACTTAGATGAAATGCATGATGGGTCTGGCGAGCCATAAAAAGTA
ATCATTTAGTCTCTAGGGTTTTATAATACACCCCTATCTCACAGCCCCGA
TGGAACTTTTTTCCTCAGTGGAGATAAAATTTCTATTGAAATCCCAATAG
GGATAGAAATTCCATTGTTCCAATGTTAGAAAACCCAGTGGGATGTTTTG
AGAATTCAATTTAAACATTGAATTTCGAGTGTGTATTAACTCAAAGTCAA
TTTCCAAGTGGGGCCGAAATCCCAGGGTATTTTCTCACCGGGGACGAAAT
TATTGCCAAATTTTCCAGTGGGGGTGGGTTCCCAATGGGTTTGTGAAACA
GGGGTGTTATAATTAAGAATTTAAGAACTGATCCCTCAAAGGTTCATAAA
TTCTTGAAATGGGCTTTTCCAGAAAAAAACCGTACACCCCCTGTTGAAGA
GCTCCAACCTTTTGTGAACTACCCCCTTGGAATTCCAGGAAATTTTAGGA
TCATACCCCTCTGGAATTCCGAATTTTGATAAATTCGGCTTAATTTTGAC
CAATATTTGATGATATAGGTTGATATTTCTGAAGTTTTGCCTACCCATCC
TCTCGGTAACGTAGTACCTTCATAGTTTGATGGTTATCTACTTTCGTTTT
TAGCCAAGTCTATTGCAATTCCAAGTGTAGTCCTTTTAAAGAATTTTACA
TTTAATTTTATCAAAGCTTCTTTCTGGGTCTTGAATGAACAGAATATTTT
CACAGCTTAATTCCTATCCCACAATAATAATGTCATGACAAGGGAGCACC
ATGCTCTATCAAATCTAATACCCCCTTAACTTTTCCAATTTGACAGTTAA
TTTGTTCAAAAACCATTCCAGGCTTAGGATTGTTCCTAAATTATTCTTAT
AATTTGGCATTTTGAGCCTCGTTACTCTTATGAAATTATCCTTATAAAAA
AGACTTTTCCTCAACCTATAATGATCATTACAGCATGTAAAAACCAAAAA
ACTACACGCTTTGTATCCAGATTGATTTGACGCTGTGTTAAATTTTTGCA
TATTTTAATTCTAAAAAAATACACTATATTTAGGCTAAATGCCATTTTTT
TCTAAATATTACTATTTGGTTGATTGCAATGATACAAAGTTTATTTTTCA
AATCAAACGTCTTTCTTTTGGATAGTTTTCATTTGCCTGGTCAAGTGTTC
TTCATGTTTCCTTTGATGGTGGTCTTTGATTTCCTTCTTTCTGCGACCAC
CCCAACGGTAGTTCACTTCGATTTTTGCCTCCCCAACGGCCCGGTATTTC
ACTTCGCTTTTTGCCTCCCCAACGGCCCGGTATTTCACTTCGCTTTTTAC
CTCCCCAATGGCCTGGTAATTCACTTCGCTTTTTGCCTCCCCAATGGCCT
GGTAACTCACTTCTCTTTTTGCCTCCCCAACGGCCCGGTAATTCACCTCT
CTTTTTGCCTCCCCAACGACCCGGTAATTCACCTCTTTTACGACCACCCC
AACGACCAGGGGGTCCTACTCGTCGCATTCCTCTCTTCCGTCCACCCCAC
CGACCAGGGGGTCCATCAATATNAACGGCCAGGGGGTCCTACTCGTCGCA
TTCCTCTTTTCCGTCCACTCCATCGACCAGGGGTTCCATCAACACCAGCC
TCTCTTTTACCACATCCCCAACGACAAGGTGGACCCTCAAATTTACCAAC
TCCACTGTTTTCGGTACCTTGTTCCTTTTCTTGTCTTCCGTAAAGTGAAT
TATCCGTACCATCAGCAGCCCGGTCAAAAGTGTCATCGGAATTCGCTATA
TCTGATCCCCCACCAGTACTTTTTTTCGAAACATCTTTGATTTTCATAGG
ATGAGCTGATTTCTTTACCAAAGTTTTTCCATGGTCAGCCATTTTCACGG
TGTTATCTATCAAATTCTTCTTATTCCTAACATGTTGTTTATTTGGCATC
CCATTGGTCAAACAAAGACACGTGATTCCGAGTAGAAAGAGATTTGTCCA
TGAACAAAATCTCATCTTGAAAGCGACCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064701-exon-scaffold_421-1575043694:67451..69220 | TCONS_00064701-exon-scaffold_421-1575043694:67451..69220 | Clytia hemisphaerica | exon |
| TCONS_00064701-exon-scaffold_421-1575043694:66990..67377 | TCONS_00064701-exon-scaffold_421-1575043694:66990..67377 | Clytia hemisphaerica | exon |
| TCONS_00064701-exon-scaffold_421-1510915933:67451..69220 | TCONS_00064701-exon-scaffold_421-1510915933:67451..69220 | Clytia hemisphaerica | exon |
| TCONS_00064701-exon-scaffold_421-1510915933:66990..67377 | TCONS_00064701-exon-scaffold_421-1510915933:66990..67377 | Clytia hemisphaerica | exon |
| TCONS_00064701-exon-scaffold_421-1491911889:67451..69220 | TCONS_00064701-exon-scaffold_421-1491911889:67451..69220 | Clytia hemisphaerica | exon |
| TCONS_00064701-exon-scaffold_421-1491911889:66990..67377 | TCONS_00064701-exon-scaffold_421-1491911889:66990..67377 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_421 | supercontig | scaffold_421:66990..69220 - |
Blast
The following BLAST results are available for this feature:
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