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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064693 ID=TCONS_00064693|Name=TCONS_00064693|organism=Clytia hemisphaerica|type=transcript|length=240bp
aacgttgtgtgccagctatgTATAGTTATAAAAACGGAGTGTTTATCAAA
GTCGAAATCACCTCTTACTCAACTGTTCAAGGAGGAGGTTGTTTTGCTGC
ACAGAATGGCAAAAATGCAGATCATTTTTTTGTTACTAGCTCTCATTCAT
GCTACTACTGCCAAAGCATATGGCGGTTACTCACCGTTCGAGTCTGACTA
CCAAAAGAATGATTTCCAAAACAAGGACTACCCTGAGGAT Run BLAST on NCBI transcript from alignment at scaffold_421:46181..48039+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064693 ID=TCONS_00064693|Name=TCONS_00064693|organism=Clytia hemisphaerica|type=transcript|length=1859bp|location=Sequence derived from alignment at scaffold_421:46181..48039+ (Clytia hemisphaerica)
aacgttgtgtgccagctatgTATAGTTATAAAAACGGAGTGTTTATCAAA
GTCGAAATCACCTCTTACTCAACTGTTCAAGGAGGAGGTTGTTTTGCTGC
ACAGAATGGCAAAAATGCAGATCATTTTTTTGTTACTAGCTCTCATTCAT
GCTACTACTGCCAAAGGTaacttattcaatttttgtttgTGATTGGGCTT
AAGCGATTTTATCGCCGGCGTTGAtataataccgagtttatgtataagtg
tttttctgcgacggagacggtgaggttctaatttgactagatcctgacca
gctgaggacgaagGTAAATCatcacttttaccgtcctcgattttgcgagt
caaaactgcgggttattccaaatcgcttcagtcactccgccgtcctcaaa
attgcaaatacataaactcgcgaATTTTCACACCCCGGTcttacagcccc
ggtggaattttttcccACAGTAGTagggataaatttttttatcgaaatcc
caatgggagtagaaattatattgttcccgagcttaaaatatccagtaggg
atggttttggaCAGCAATTTCttgcattgaatttcgaatggggatggtAT
AtgccaaagtcaatttcccattggggctgaaattgtagtgTTCTGTCCat
cggggacaaaattttggcccAGCGGGTATGTGACACAGGGGTTTATTTTC
GAATTAAAAGAGGGATCGTTCGCTAATATTGTATACGATTTTCTTAAATA
TGAAAGTGTATAGTATTTATTAGAATGTTTAGGTGTCTTGGTAACTAAAG
GATCTTAACGGACGATTCTAAAATATATATGTGTTTACGGAAAAGCTAGC
GGCGGAAGAGTCAGGAACAACCACTTTAGAATTTAAACTCCCTCTTCACA
GACTGGGACCtctttcccactggaaaaattgtccaagaTATCGTCCCCAG
TTGAAAATTATACTCACCCTTTGCGGgtgttgatttttgattttggaacc
CTTATAGGAACTCaatttgttttaaatggtttttgtaccccttggaagga
ctttcgagggtgtgaaagagggacccttatggctcgcacatacctggcac
ccattttgcctaaaaactcCTCCCCCCCGGGGGCCCCAGTGATacttgtg
agaagggggtgtttgcTAATTACTTCAGATCTCTTCTAGGATTTAGATAT
AAACTTGACTGAGAATGTTTCATTTATTGATTTCAGCATATGGCGGTTAC
TCACCGTTCGAGTCTGACTACCAAAAGAATGATTTCCAAAACAAGGGTGA
gattttgattacaaaaataattCCTTGAAATGACAATGAACCGTACTTAC
GGCTATTTTTCCAAAAGCGAACTCAACATTTAAATCGTTTTTCTGAGCGC
GTTGATTGGTCAATTATAtcagaatttcaaaatgaatgtTGAGCCAGACT
TTTGGAAAGATAGCCGCATACTTATGGAATATATCGGAATTTGAAAGGGA
AATCCCATcataaaagttaactttctaCATGGAATATAAGAGCTAGATTT
TTTTGTGTAGTGATGGTGATTTCCCTAATGACTGTAAACTTAATTGATGA
ATATTTATGGTGcataccgagtttatcgttctacatctgttGGCTTAAAA
ACCAGACAGgatgttagggaaatatggcgatagactctctaccttcactc
atatATCATTTTCTCTCAatccggctgataatcgaagtatcgattgacTA
TCTATCTATTTCTACATCTGTAATTTGAGCTTTATGAAGCTCATTAAATG
TATTCTAAATTCAAAACGTCATGTTGATGCTCCTATTTTACTTAGACTAC
CCTGAGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064693-exon-scaffold_421-1491911889:46181..46346 | TCONS_00064693-exon-scaffold_421-1491911889:46181..46346 | Clytia hemisphaerica | exon |
| TCONS_00064693-exon-scaffold_421-1510915933:46181..46346 | TCONS_00064693-exon-scaffold_421-1510915933:46181..46346 | Clytia hemisphaerica | exon |
| TCONS_00064693-exon-scaffold_421-1575043694:46181..46346 | TCONS_00064693-exon-scaffold_421-1575043694:46181..46346 | Clytia hemisphaerica | exon |
| TCONS_00064693-exon-scaffold_421-1491911889:47417..47476 | TCONS_00064693-exon-scaffold_421-1491911889:47417..47476 | Clytia hemisphaerica | exon |
| TCONS_00064693-exon-scaffold_421-1510915933:47417..47476 | TCONS_00064693-exon-scaffold_421-1510915933:47417..47476 | Clytia hemisphaerica | exon |
| TCONS_00064693-exon-scaffold_421-1575043694:47417..47476 | TCONS_00064693-exon-scaffold_421-1575043694:47417..47476 | Clytia hemisphaerica | exon |
| TCONS_00064693-exon-scaffold_421-1491911889:48026..48039 | TCONS_00064693-exon-scaffold_421-1491911889:48026..48039 | Clytia hemisphaerica | exon |
| TCONS_00064693-exon-scaffold_421-1510915933:48026..48039 | TCONS_00064693-exon-scaffold_421-1510915933:48026..48039 | Clytia hemisphaerica | exon |
| TCONS_00064693-exon-scaffold_421-1575043694:48026..48039 | TCONS_00064693-exon-scaffold_421-1575043694:48026..48039 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_421 | supercontig | scaffold_421:46181..48039 + |
Blast
The following BLAST results are available for this feature:
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