TCONS_00064692 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064692
Unique NameTCONS_00064692
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1114

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064692 ID=TCONS_00064692|Name=TCONS_00064692|organism=Clytia hemisphaerica|type=transcript|length=1114bp
AAATCTTTATGTTGATGCTTTACAGGAGAGTTTTAACAATGTCTGGAGAT
TAAGAGCGGATCAAGGATACTTGAATGGATACAGGAAACTCTTTacaaaa
cgaaaaataaatgATCCACAGAGCTATTGCGGTGATGCAGAAAGAATACA
AGTTTAAGATGCAGAAACACGTTATTTATGTTTTAACAACTGCGGTTGAG
AGCTTTATCTTCCATATAAGGCTAAAAAGCCTCCGGACACCCTCCTTCTT
CGCATATGGCGGTTACTCACCGTTCGAGTCTGACTACCAAAAGAATGATT
TCCAAAACAAGGACTACCCTGAGGATCACAACGATAATGACAGATTCTAT
GAAGAGTTCAAGCAGTCAAATTCTGCCATTGAGAGTGATCAAATTCAAGA
AGCATTCGACTTTGATGAGTACGAAAGAGAATTGAAATGCGCTGATAGAT
ACTCCAACTGTGCAAGTTACGCGTGGGTTTGCAAGAAAACAGGATCCAGT
TACAGAAGTTTCCAGCAAGGTTGTCGAAAGACATGTGGATTTTGCAAACC
TGACGCGCCACCAGcttACGTAAGCGCTCGACCGGGAATATCACTTTCTA
AAAAAAGAGATATTATGAAAGCCTGTTTGGATGCACACAATGCTAAACGA
AGACTTCACCAACATACACCAAGTATGATATACAGTCAGAAGCTGGCTGA
TCGAGCCCAAACATATGCTGAATATTTGAGGGATACAGATAAGTTCGATC
ACGATGACTTTAGAGGATATGGATTTGACAAAAGTATCGGAGAAAATCTC
TATTGGTCATCATCCAGAATTAGAACACCTGAAGACGCTGTTGCTTCTTG
GTACAATGAAATCAAAAACTACAACTTCAGAACTAGCGCATCCAACGGTG
GCGTTATCGGTCATTTTACGCAATTGGTATGGCAAAGGTCTAATATTTTG
GGATGTGGTGTGGCTACCTCTTCAAAAGGAACCTGGATAGTTGCTCGATA
CGAACCAGCTGGTAACACTAGAGGTGCATACAAAGCAAATGTTCATCCAT
TGAAAGTAACCAGTGGTGATGCTTTCTTTGATAACAAAGATGAGATAATT
TTGTAAGAAAGACT
Run BLAST on NCBI

protein sequence of TCONS_00064692-protein

>TCONS_00064692-protein ID=TCONS_00064692-protein|Name=TCONS_00064692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=331bp
MIHRAIAVMQKEYKFKMQKHVIYVLTTAVESFIFHIRLKSLRTPSFFAYG
GYSPFESDYQKNDFQNKDYPEDHNDNDRFYEEFKQSNSAIESDQIQEAFD
FDEYERELKCADRYSNCASYAWVCKKTGSSYRSFQQGCRKTCGFCKPDAP
PAYVSARPGISLSKKRDIMKACLDAHNAKRRLHQHTPSMIYSQKLADRAQ
TYAEYLRDTDKFDHDDFRGYGFDKSIGENLYWSSSRIRTPEDAVASWYNE
IKNYNFRTSASNGGVIGHFTQLVWQRSNILGCGVATSSKGTWIVARYEPA
GNTRGAYKANVHPLKVTSGDAFFDNKDEIIL
Run BLAST on NCBI

transcript from alignment at scaffold_421:45811..51245+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064692 ID=TCONS_00064692|Name=TCONS_00064692|organism=Clytia hemisphaerica|type=transcript|length=5435bp|location=Sequence derived from alignment at scaffold_421:45811..51245+ (Clytia hemisphaerica)
AAATCTTTATGTTGATGCTTTACAGGAGAGTTTTAACAATGTCTGGAGAT
TAAGAGCGGATCAAGGATACTTGAATGGATACAGGAAACTCTTTacaaaa
cgaaaaataaatgATCCACAGAGCTATTGCGGTGATGCAGAAAGAATACA
AGTTTAAGATGCAGAAACACGTTATTTATGTTTTAACAACTGCGGTTGAG
AGCTTTATCTTCCATATAAGGCTAAAAAGCCTCCGGACACCCTCCTTCTT
CGGTAAGCATAATTAAGTTATTATTAGATTCATTAGTTGATTTACTTGAT
TatcagctgacacacaacgttgtttcaacgtcaatCTAATgtccacaacg
tccatataacgttagaatacaacgttgtgtgccagctatgTATAGTTATA
AAAACGGAGTGTTTATCAAAGTCGAAATCACCTCTTACTCAACTGTTCAA
GGAGGAGGTTGTTTTGCTGCACAGAATGGCAAAAATGCAGATCATTTTTT
TGTTACTAGCTCTCATTCATGCTACTACTGCCAAAGGTaacttattcaat
ttttgtttgTGATTGGGCTTAAGCGATTTTATCGCCGGCGTTGAtataat
accgagtttatgtataagtgtttttctgcgacggagacggtgaggttcta
atttgactagatcctgaccagctgaggacgaagGTAAATCatcactttta
ccgtcctcgattttgcgagtcaaaactgcgggttattccaaatcgcttca
gtcactccgccgtcctcaaaattgcaaatacataaactcgcgaATTTTCA
CACCCCGGTcttacagccccggtggaattttttcccACAGTAGTagggat
aaatttttttatcgaaatcccaatgggagtagaaattatattgttcccga
gcttaaaatatccagtagggatggttttggaCAGCAATTTCttgcattga
atttcgaatggggatggtATAtgccaaagtcaatttcccattggggctga
aattgtagtgTTCTGTCCatcggggacaaaattttggcccAGCGGGTATG
TGACACAGGGGTTTATTTTCGAATTAAAAGAGGGATCGTTCGCTAATATT
GTATACGATTTTCTTAAATATGAAAGTGTATAGTATTTATTAGAATGTTT
AGGTGTCTTGGTAACTAAAGGATCTTAACGGACGATTCTAAAATATATAT
GTGTTTACGGAAAAGCTAGCGGCGGAAGAGTCAGGAACAACCACTTTAGA
ATTTAAACTCCCTCTTCACAGACTGGGACCtctttcccactggaaaaatt
gtccaagaTATCGTCCCCAGTTGAAAATTATACTCACCCTTTGCGGgtgt
tgatttttgattttggaaccCTTATAGGAACTCaatttgttttaaatggt
ttttgtaccccttggaaggactttcgagggtgtgaaagagggacccttat
ggctcgcacatacctggcacccattttgcctaaaaactcCTCCCCCCCGG
GGGCCCCAGTGATacttgtgagaagggggtgtttgcTAATTACTTCAGAT
CTCTTCTAGGATTTAGATATAAACTTGACTGAGAATGTTTCATTTATTGA
TTTCAGCATATGGCGGTTACTCACCGTTCGAGTCTGACTACCAAAAGAAT
GATTTCCAAAACAAGGGTGAgattttgattacaaaaataattCCTTGAAA
TGACAATGAACCGTACTTACGGCTATTTTTCCAAAAGCGAACTCAACATT
TAAATCGTTTTTCTGAGCGCGTTGATTGGTCAATTATAtcagaatttcaa
aatgaatgtTGAGCCAGACTTTTGGAAAGATAGCCGCATACTTATGGAAT
ATATCGGAATTTGAAAGGGAAATCCCATcataaaagttaactttctaCAT
GGAATATAAGAGCTAGATTTTTTTGTGTAGTGATGGTGATTTCCCTAATG
ACTGTAAACTTAATTGATGAATATTTATGGTGcataccgagtttatcgtt
ctacatctgttGGCTTAAAAACCAGACAGgatgttagggaaatatggcga
tagactctctaccttcactcatatATCATTTTCTCTCAatccggctgata
atcgaagtatcgattgacTATCTATCTATTTCTACATCTGTAATTTGAGC
TTTATGAAGCTCATTAAATGTATTCTAAATTCAAAACGTCATGTTGATGC
TCCTATTTTACTTAGACTACCCTGAGGATCACAACGATAATGACAGATTC
TATGAAGAGTTCAAGCAGTCAAGTATGTCGAATGATATTTCAATACGATC
CACGGGTTTCGGATTAAATCTAGCTAGCTACCATCTGTTTTGTTGAGata
catgtttttatttacCAAGCAAGTGTCtttgccccttggtcaggctcctg
tatgcttaagttttcaaagcatccaggcatagctatacttatgattcacc
ccgagtcaagtttttagtaaaatttcagaaatgttgtaaaaatttgttca
gattttgggagcagtgggaTGTaactagccgtggaatgtcttttttttac
ttgaccattACCAGACCTTTTAAAAACAGatgaaaaaatgacaacttgaa
aaatatttcaggctggaatatatgcttaagaattctgcaaatctgagcct
ttatatgcttataaacgttatgcttataaaaatacatGTAATAATATTGC
CAGGAGACTTCTTTTTCAGAAGGATAGTCTTTATTTCAGTGTTGCCGtag
aaataagaacaggataagaacaatttggaggctcaaaatccaaaaataat
gaGAACAGCTGAGCCTAAAAAAAACTAATCTTATGAAAAAGGGGAATAGT
TTTTTAATAGATATTTtcatctctctctctctctcttgaAGATTCTGCCA
TTGAGAGTGATCAAATTCAAGAAGCATTCGACTTTGATGAGTACGAAAGA
GAATTGAGTAAGTCTTTTTCAGTGGTCagcaaatttttccattttgaatt
ataactgaaaaccttaagggttgatttttttgctcaaatttactcatatt
tggctaaattttctttgcactgtaagggtaatTGTGGGCCGCACGTAGGG
TCGTTTTTGAATAGAGTGCCCCCCCAGATCAAATGCTtcttaattcgaac
aagttttccccgtccctttagttaacaatgccttatttATTatccttaaa
tcgaacaaaCTTTGGGTCCCTTGGTTATGGAGGctttgttgtattttttt
tcttcacttttatCTTATTCTAAAGAATGCGCTGATAGATACTCCAACTG
TGCAAGTTACGCGTGGGTTTGCAAGAAAACAGGATCCAGTTACAGAAGTT
TCCAGCAAGGTTGTCGAAAGACATGTGGATTTTGCAAACCTGACGCGCCA
CCAGGTAgattattgggcttttccagaaagaatTTGACATGGACATGATG
ACTTTTGACTCCTGGACAGCAGGGAGTCTTAAATTCTTCATGTTTTTGAG
TAGATGCACTTCAATCCCTATTCGGGAAAAAAAGCAAGGTTGAGTATAAT
TTAAATTCCAAAAGCTTCTAAAGAAGTTTCCCTGcaagaaagtttgaaat
aacGGCTTAGATACTTACGCGACCTATTGGGCCattgaagaattttttaa
acGTTATTACGCTGTAGTTAGCAATATATAAACTTAGAGTTAAAATTTCC
ATTCTTAGACTTAAGTCACCCCCGAGGCCTTAAACAattctctttttcat
tttcagcttACGTAAGCGCTCGACCGGGAATATCACTTTCTAAAAAAAGA
GATATTATGAGTAAGTATATATACTTTTTCCATAATACAATTTACCTTGG
ATGCTAGACCATTAGAGCcccctctcaccaacttttgctcgttctcctag
gCAGCTCCTATTTAAGCAAACGCTTACCACTTTTATGTATTATGTCTGTC
CTGTGACATGATTAATTagcagactagtttgctagtctacagAATGAAGA
AGGGGTTCCAGCCGCCATGAAGGAGGCGTTTAGCAAAGGGAGTTCGTACA
GAAACTGTTCTGATGAGAAACTTTGTTATAATTTCTATCAATAGAAGCCT
GTTTGGATGCACACAATGCTAAACGAAGACTTCACCAACATACACCAAGT
ATGATATACAGTCAGAAGCTGGCTGATCGAGCCCAAACATATGCTGAATA
TTTGAGGGATACAGATAAGTTCGATCACGATGACTTTAGAGGATATGGAT
TTGACAAAAGTATCGGAGAAAATCTCTATTGGTCATCATCCAGAATTAGA
ACACCTGAAGACGCTGTTGCTTCTTGGTATGTTAAGATAAAACGAAATAC
TTTTttcccgagggggggggggggactaggtttgcgaggtgatgggtcca
aaaatcgaaaattgacccttagagagatggAAAATTGGCGTTTTTGTGAC
CCTTAAAGAgatctttctcaaaattttcttttgaatggtttttgtacccc
tttgagaggctttcgagggtgtgaaaaagggacccttatggcgcTGGCAC
CCATTTTACCTAAGTACTCCCCCCCGGGACTTTTTTCGTGTAATGGTTTT
CTGTGCGTCTTAAAAACCTagtaaaacaacaatttttatcCTCACTTACC
TTTGAAGGACCAGCATAAAGTGGAATataatttagatattttattggtag
aaaattcttagaaaatCCGTTGGTAAataatttcatcacttttttttACC
GATGAACAGTTTTTGCCGATGAAAGACTGAGTTGTTTTAGCATTTTCTAC
CGTGATTCATCTGATATGTCACGGTCAAGTTTTTCCCCTAAAGTTTCTTG
ATTGTCTTTTAATAAAAACTTACTGAATTCTCTTTCTAAGATCGTTGGAT
AGTTTAATTGAGCTACCGATATGTCACGGTcaagtttttaaactttttcc
cAACATTTTCTTGATTTGAGAAGACAAGTTAATCAAATATGGGCGAAGTC
TCAGCTTTGAGATGTGattcaaaccaaaccaaaccaaaccTTTTAATAAA
AACTTATCGGATTCTCTTTCTaagatttttggatattttaaaTGAAGAAC
TACTTGCTaaggaaaaaaatcattacATTAATTTCTCCAAACTCTTTTAT
TCGACTGTTTTTCTCCTTCAGGTACAATGAAATCAAAAACTACAACTTCA
GAACTAGCGCATCCAACGGTGGCGTTATCGGTCATTTTACGCAATTGGTA
TGGCAAAGGTCTAATATTTTGGGATGTGGTGTGGCTACCTCTTCAAAAGG
AACCTGGATAGTTGCTCGATACGAACCAGCTGGTAACACTAGAGGTGCAT
ACAAAGCAAATGTTCATCCATTGAAAGTAACCAGTGGTGATGCTTTCTTT
GATAACAAAGATGAGATAATTTTGTAAGAAAGACT

Coding sequence (CDS) from alignment at scaffold_421:45811..51245+

>TCONS_00064692 ID=TCONS_00064692|Name=TCONS_00064692|organism=Clytia hemisphaerica|type=CDS|length=7968bp|location=Sequence derived from alignment at scaffold_421:45811..51245+ (Clytia hemisphaerica)
atgATCCACAGAGCTATTGCGGTGATGCAGAAAGAATACAAGTTTAAGAT
GCAGAAACACGTTATTTATGTTTTAACAACTGCGGTTGAGAGCTTTATCT
TCCATATAAGGCTAAAAAGCCTCCGGACACCCTCCTTCTTCGCATATGGC
GGTTACTCACCGTTCGAGTCTGACTACCAAAAGAATGATTTCCAAAACAA
GGACTACCCTGAGGATCACAACGATAATGACAGATTCTATGAAGAGTTCA
AGCAGTCAAATTCTGCCATTGAGAGTGATCAAATTCAAGAAGCATTCGAC
TTTGATGAGTACGAAAGAGAATTGAAATGCGCTGATAGATACTCCAACTG
TGCAAGTTACGCGTGGGTTTGCAAGAAAACAGGATCCAGTTACAGAAGTT
TCCAGCAAGGTTGTCGAAAGACATGTGGATTTTGCAAACCTGACGCGCCA
CCAGcttACGTAAGCGCTCGACCGGGAATATCACTTTCTAAAAAAAGAGA
TATTATGAAAGCCTGTTTGGATGCACACAATGCTAAACGAAGACTTCACC
AACATACACCAAGTATGATATACAGTCAGAAGCTGGCTGATCGAGCCCAA
ACATATGCTGAATATTTGAGGGATACAGATAAGTTCGATCACGATGACTT
TAGAGGATATGGATTTGACAAAAGTATCGGAGAAAATCTCTATTGGTCAT
CATCCAGAATTAGAACACCTGAAGACGCTGTTGCTTCTTGGTACAATGAA
ATCAAAAACTACAACTTCAGAACTAGCGCATCCAACGGTGGCGTTATCGG
TCATTTTACGCAATTGGTATGGCAAAGGTCTAATATTTTGGGATGTGGTG
TGGCTACCTCTTCAAAAGGAACCTGGATAGTTGCTCGATACGAACCAGCT
GGTAACACTAGAGGTGCATACAAAGCAAATGTTCATCCATTGAAAGTAAC
CAGTGGTGATGCTTTCTTTGATAACAAAGATGAGATAATTTTGTAAatgA
TCCACAGAGCTATTGCGGTGATGCAGAAAGAATACAAGTTTAAGATGCAG
AAACACGTTATTTATGTTTTAACAACTGCGGTTGAGAGCTTTATCTTCCA
TATAAGGCTAAAAAGCCTCCGGACACCCTCCTTCTTCGCATATGGCGGTT
ACTCACCGTTCGAGTCTGACTACCAAAAGAATGATTTCCAAAACAAGGAC
TACCCTGAGGATCACAACGATAATGACAGATTCTATGAAGAGTTCAAGCA
GTCAAATTCTGCCATTGAGAGTGATCAAATTCAAGAAGCATTCGACTTTG
ATGAGTACGAAAGAGAATTGAAATGCGCTGATAGATACTCCAACTGTGCA
AGTTACGCGTGGGTTTGCAAGAAAACAGGATCCAGTTACAGAAGTTTCCA
GCAAGGTTGTCGAAAGACATGTGGATTTTGCAAACCTGACGCGCCACCAG
cttACGTAAGCGCTCGACCGGGAATATCACTTTCTAAAAAAAGAGATATT
ATGAAAGCCTGTTTGGATGCACACAATGCTAAACGAAGACTTCACCAACA
TACACCAAGTATGATATACAGTCAGAAGCTGGCTGATCGAGCCCAAACAT
ATGCTGAATATTTGAGGGATACAGATAAGTTCGATCACGATGACTTTAGA
GGATATGGATTTGACAAAAGTATCGGAGAAAATCTCTATTGGTCATCATC
CAGAATTAGAACACCTGAAGACGCTGTTGCTTCTTGGTACAATGAAATCA
AAAACTACAACTTCAGAACTAGCGCATCCAACGGTGGCGTTATCGGTCAT
TTTACGCAATTGGTATGGCAAAGGTCTAATATTTTGGGATGTGGTGTGGC
TACCTCTTCAAAAGGAACCTGGATAGTTGCTCGATACGAACCAGCTGGTA
ACACTAGAGGTGCATACAAAGCAAATGTTCATCCATTGAAAGTAACCAGT
GGTGATGCTTTCTTTGATAACAAAGATGAGATAATTTTGTAAatgATCCA
CAGAGCTATTGCGGTGATGCAGAAAGAATACAAGTTTAAGATGCAGAAAC
ACGTTATTTATGTTTTAACAACTGCGGTTGAGAGCTTTATCTTCCATATA
AGGCTAAAAAGCCTCCGGACACCCTCCTTCTTCGCATATGGCGGTTACTC
ACCGTTCGAGTCTGACTACCAAAAGAATGATTTCCAAAACAAGGACTACC
CTGAGGATCACAACGATAATGACAGATTCTATGAAGAGTTCAAGCAGTCA
AATTCTGCCATTGAGAGTGATCAAATTCAAGAAGCATTCGACTTTGATGA
GTACGAAAGAGAATTGAAATGCGCTGATAGATACTCCAACTGTGCAAGTT
ACGCGTGGGTTTGCAAGAAAACAGGATCCAGTTACAGAAGTTTCCAGCAA
GGTTGTCGAAAGACATGTGGATTTTGCAAACCTGACGCGCCACCAGcttA
CGTAAGCGCTCGACCGGGAATATCACTTTCTAAAAAAAGAGATATTATGA
AAGCCTGTTTGGATGCACACAATGCTAAACGAAGACTTCACCAACATACA
CCAAGTATGATATACAGTCAGAAGCTGGCTGATCGAGCCCAAACATATGC
TGAATATTTGAGGGATACAGATAAGTTCGATCACGATGACTTTAGAGGAT
ATGGATTTGACAAAAGTATCGGAGAAAATCTCTATTGGTCATCATCCAGA
ATTAGAACACCTGAAGACGCTGTTGCTTCTTGGTACAATGAAATCAAAAA
CTACAACTTCAGAACTAGCGCATCCAACGGTGGCGTTATCGGTCATTTTA
CGCAATTGGTATGGCAAAGGTCTAATATTTTGGGATGTGGTGTGGCTACC
TCTTCAAAAGGAACCTGGATAGTTGCTCGATACGAACCAGCTGGTAACAC
TAGAGGTGCATACAAAGCAAATGTTCATCCATTGAAAGTAACCAGTGGTG
ATGCTTTCTTTGATAACAAAGATGAGATAATTTTGTAAatgATCCACAGA
GCTATTGCGGTGATGCAGAAAGAATACAAGTTTAAGATGCAGAAACACGT
TATTTATGTTTTAACAACTGCGGTTGAGAGCTTTATCTTCCATATAAGGC
TAAAAAGCCTCCGGACACCCTCCTTCTTCGCATATGGCGGTTACTCACCG
TTCGAGTCTGACTACCAAAAGAATGATTTCCAAAACAAGGACTACCCTGA
GGATCACAACGATAATGACAGATTCTATGAAGAGTTCAAGCAGTCAAATT
CTGCCATTGAGAGTGATCAAATTCAAGAAGCATTCGACTTTGATGAGTAC
GAAAGAGAATTGAAATGCGCTGATAGATACTCCAACTGTGCAAGTTACGC
GTGGGTTTGCAAGAAAACAGGATCCAGTTACAGAAGTTTCCAGCAAGGTT
GTCGAAAGACATGTGGATTTTGCAAACCTGACGCGCCACCAGcttACGTA
AGCGCTCGACCGGGAATATCACTTTCTAAAAAAAGAGATATTATGAAAGC
CTGTTTGGATGCACACAATGCTAAACGAAGACTTCACCAACATACACCAA
GTATGATATACAGTCAGAAGCTGGCTGATCGAGCCCAAACATATGCTGAA
TATTTGAGGGATACAGATAAGTTCGATCACGATGACTTTAGAGGATATGG
ATTTGACAAAAGTATCGGAGAAAATCTCTATTGGTCATCATCCAGAATTA
GAACACCTGAAGACGCTGTTGCTTCTTGGTACAATGAAATCAAAAACTAC
AACTTCAGAACTAGCGCATCCAACGGTGGCGTTATCGGTCATTTTACGCA
ATTGGTATGGCAAAGGTCTAATATTTTGGGATGTGGTGTGGCTACCTCTT
CAAAAGGAACCTGGATAGTTGCTCGATACGAACCAGCTGGTAACACTAGA
GGTGCATACAAAGCAAATGTTCATCCATTGAAAGTAACCAGTGGTGATGC
TTTCTTTGATAACAAAGATGAGATAATTTTGTAAatgATCCACAGAGCTA
TTGCGGTGATGCAGAAAGAATACAAGTTTAAGATGCAGAAACACGTTATT
TATGTTTTAACAACTGCGGTTGAGAGCTTTATCTTCCATATAAGGCTAAA
AAGCCTCCGGACACCCTCCTTCTTCGCATATGGCGGTTACTCACCGTTCG
AGTCTGACTACCAAAAGAATGATTTCCAAAACAAGGACTACCCTGAGGAT
CACAACGATAATGACAGATTCTATGAAGAGTTCAAGCAGTCAAATTCTGC
CATTGAGAGTGATCAAATTCAAGAAGCATTCGACTTTGATGAGTACGAAA
GAGAATTGAAATGCGCTGATAGATACTCCAACTGTGCAAGTTACGCGTGG
GTTTGCAAGAAAACAGGATCCAGTTACAGAAGTTTCCAGCAAGGTTGTCG
AAAGACATGTGGATTTTGCAAACCTGACGCGCCACCAGcttACGTAAGCG
CTCGACCGGGAATATCACTTTCTAAAAAAAGAGATATTATGAAAGCCTGT
TTGGATGCACACAATGCTAAACGAAGACTTCACCAACATACACCAAGTAT
GATATACAGTCAGAAGCTGGCTGATCGAGCCCAAACATATGCTGAATATT
TGAGGGATACAGATAAGTTCGATCACGATGACTTTAGAGGATATGGATTT
GACAAAAGTATCGGAGAAAATCTCTATTGGTCATCATCCAGAATTAGAAC
ACCTGAAGACGCTGTTGCTTCTTGGTACAATGAAATCAAAAACTACAACT
TCAGAACTAGCGCATCCAACGGTGGCGTTATCGGTCATTTTACGCAATTG
GTATGGCAAAGGTCTAATATTTTGGGATGTGGTGTGGCTACCTCTTCAAA
AGGAACCTGGATAGTTGCTCGATACGAACCAGCTGGTAACACTAGAGGTG
CATACAAAGCAAATGTTCATCCATTGAAAGTAACCAGTGGTGATGCTTTC
TTTGATAACAAAGATGAGATAATTTTGTAAatgATCCACAGAGCTATTGC
GGTGATGCAGAAAGAATACAAGTTTAAGATGCAGAAACACGTTATTTATG
TTTTAACAACTGCGGTTGAGAGCTTTATCTTCCATATAAGGCTAAAAAGC
CTCCGGACACCCTCCTTCTTCGCATATGGCGGTTACTCACCGTTCGAGTC
TGACTACCAAAAGAATGATTTCCAAAACAAGGACTACCCTGAGGATCACA
ACGATAATGACAGATTCTATGAAGAGTTCAAGCAGTCAAATTCTGCCATT
GAGAGTGATCAAATTCAAGAAGCATTCGACTTTGATGAGTACGAAAGAGA
ATTGAAATGCGCTGATAGATACTCCAACTGTGCAAGTTACGCGTGGGTTT
GCAAGAAAACAGGATCCAGTTACAGAAGTTTCCAGCAAGGTTGTCGAAAG
ACATGTGGATTTTGCAAACCTGACGCGCCACCAGcttACGTAAGCGCTCG
ACCGGGAATATCACTTTCTAAAAAAAGAGATATTATGAAAGCCTGTTTGG
ATGCACACAATGCTAAACGAAGACTTCACCAACATACACCAAGTATGATA
TACAGTCAGAAGCTGGCTGATCGAGCCCAAACATATGCTGAATATTTGAG
GGATACAGATAAGTTCGATCACGATGACTTTAGAGGATATGGATTTGACA
AAAGTATCGGAGAAAATCTCTATTGGTCATCATCCAGAATTAGAACACCT
GAAGACGCTGTTGCTTCTTGGTACAATGAAATCAAAAACTACAACTTCAG
AACTAGCGCATCCAACGGTGGCGTTATCGGTCATTTTACGCAATTGGTAT
GGCAAAGGTCTAATATTTTGGGATGTGGTGTGGCTACCTCTTCAAAAGGA
ACCTGGATAGTTGCTCGATACGAACCAGCTGGTAACACTAGAGGTGCATA
CAAAGCAAATGTTCATCCATTGAAAGTAACCAGTGGTGATGCTTTCTTTG
ATAACAAAGATGAGATAATTTTGTAAatgATCCACAGAGCTATTGCGGTG
ATGCAGAAAGAATACAAGTTTAAGATGCAGAAACACGTTATTTATGTTTT
AACAACTGCGGTTGAGAGCTTTATCTTCCATATAAGGCTAAAAAGCCTCC
GGACACCCTCCTTCTTCGCATATGGCGGTTACTCACCGTTCGAGTCTGAC
TACCAAAAGAATGATTTCCAAAACAAGGACTACCCTGAGGATCACAACGA
TAATGACAGATTCTATGAAGAGTTCAAGCAGTCAAATTCTGCCATTGAGA
GTGATCAAATTCAAGAAGCATTCGACTTTGATGAGTACGAAAGAGAATTG
AAATGCGCTGATAGATACTCCAACTGTGCAAGTTACGCGTGGGTTTGCAA
GAAAACAGGATCCAGTTACAGAAGTTTCCAGCAAGGTTGTCGAAAGACAT
GTGGATTTTGCAAACCTGACGCGCCACCAGcttACGTAAGCGCTCGACCG
GGAATATCACTTTCTAAAAAAAGAGATATTATGAAAGCCTGTTTGGATGC
ACACAATGCTAAACGAAGACTTCACCAACATACACCAAGTATGATATACA
GTCAGAAGCTGGCTGATCGAGCCCAAACATATGCTGAATATTTGAGGGAT
ACAGATAAGTTCGATCACGATGACTTTAGAGGATATGGATTTGACAAAAG
TATCGGAGAAAATCTCTATTGGTCATCATCCAGAATTAGAACACCTGAAG
ACGCTGTTGCTTCTTGGTACAATGAAATCAAAAACTACAACTTCAGAACT
AGCGCATCCAACGGTGGCGTTATCGGTCATTTTACGCAATTGGTATGGCA
AAGGTCTAATATTTTGGGATGTGGTGTGGCTACCTCTTCAAAAGGAACCT
GGATAGTTGCTCGATACGAACCAGCTGGTAACACTAGAGGTGCATACAAA
GCAAATGTTCATCCATTGAAAGTAACCAGTGGTGATGCTTTCTTTGATAA
CAAAGATGAGATAATTTTGTAAatgATCCACAGAGCTATTGCGGTGATGC
AGAAAGAATACAAGTTTAAGATGCAGAAACACGTTATTTATGTTTTAACA
ACTGCGGTTGAGAGCTTTATCTTCCATATAAGGCTAAAAAGCCTCCGGAC
ACCCTCCTTCTTCGCATATGGCGGTTACTCACCGTTCGAGTCTGACTACC
AAAAGAATGATTTCCAAAACAAGGACTACCCTGAGGATCACAACGATAAT
GACAGATTCTATGAAGAGTTCAAGCAGTCAAATTCTGCCATTGAGAGTGA
TCAAATTCAAGAAGCATTCGACTTTGATGAGTACGAAAGAGAATTGAAAT
GCGCTGATAGATACTCCAACTGTGCAAGTTACGCGTGGGTTTGCAAGAAA
ACAGGATCCAGTTACAGAAGTTTCCAGCAAGGTTGTCGAAAGACATGTGG
ATTTTGCAAACCTGACGCGCCACCAGcttACGTAAGCGCTCGACCGGGAA
TATCACTTTCTAAAAAAAGAGATATTATGAAAGCCTGTTTGGATGCACAC
AATGCTAAACGAAGACTTCACCAACATACACCAAGTATGATATACAGTCA
GAAGCTGGCTGATCGAGCCCAAACATATGCTGAATATTTGAGGGATACAG
ATAAGTTCGATCACGATGACTTTAGAGGATATGGATTTGACAAAAGTATC
GGAGAAAATCTCTATTGGTCATCATCCAGAATTAGAACACCTGAAGACGC
TGTTGCTTCTTGGTACAATGAAATCAAAAACTACAACTTCAGAACTAGCG
CATCCAACGGTGGCGTTATCGGTCATTTTACGCAATTGGTATGGCAAAGG
TCTAATATTTTGGGATGTGGTGTGGCTACCTCTTCAAAAGGAACCTGGAT
AGTTGCTCGATACGAACCAGCTGGTAACACTAGAGGTGCATACAAAGCAA
ATGTTCATCCATTGAAAGTAACCAGTGGTGATGCTTTCTTTGATAACAAA
GATGAGATAATTTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040579XLOC_040579Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064692-exon-scaffold_421-1491911889:45811..46062TCONS_00064692-exon-scaffold_421-1491911889:45811..46062Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1510915933:45811..46062TCONS_00064692-exon-scaffold_421-1510915933:45811..46062Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1575043694:45811..46062TCONS_00064692-exon-scaffold_421-1575043694:45811..46062Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1491911889:47417..47476TCONS_00064692-exon-scaffold_421-1491911889:47417..47476Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1510915933:47417..47476TCONS_00064692-exon-scaffold_421-1510915933:47417..47476Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1575043694:47417..47476TCONS_00064692-exon-scaffold_421-1575043694:47417..47476Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1491911889:48026..48082TCONS_00064692-exon-scaffold_421-1491911889:48026..48082Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1510915933:48026..48082TCONS_00064692-exon-scaffold_421-1510915933:48026..48082Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1575043694:48026..48082TCONS_00064692-exon-scaffold_421-1575043694:48026..48082Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1491911889:48702..48767TCONS_00064692-exon-scaffold_421-1491911889:48702..48767Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1510915933:48702..48767TCONS_00064692-exon-scaffold_421-1510915933:48702..48767Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1575043694:48702..48767TCONS_00064692-exon-scaffold_421-1575043694:48702..48767Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1491911889:49086..49214TCONS_00064692-exon-scaffold_421-1491911889:49086..49214Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1510915933:49086..49214TCONS_00064692-exon-scaffold_421-1510915933:49086..49214Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1575043694:49086..49214TCONS_00064692-exon-scaffold_421-1575043694:49086..49214Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1491911889:49567..49620TCONS_00064692-exon-scaffold_421-1491911889:49567..49620Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1510915933:49567..49620TCONS_00064692-exon-scaffold_421-1510915933:49567..49620Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1575043694:49567..49620TCONS_00064692-exon-scaffold_421-1575043694:49567..49620Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1491911889:49905..50136TCONS_00064692-exon-scaffold_421-1491911889:49905..50136Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1510915933:49905..50136TCONS_00064692-exon-scaffold_421-1510915933:49905..50136Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1575043694:49905..50136TCONS_00064692-exon-scaffold_421-1575043694:49905..50136Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1491911889:50982..51245TCONS_00064692-exon-scaffold_421-1491911889:50982..51245Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1510915933:50982..51245TCONS_00064692-exon-scaffold_421-1510915933:50982..51245Clytia hemisphaericaexon
TCONS_00064692-exon-scaffold_421-1575043694:50982..51245TCONS_00064692-exon-scaffold_421-1575043694:50982..51245Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064692-proteinTCONS_00064692-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_421supercontigscaffold_421:45811..51245 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.888	11.1585	7.63886	7.07519	2.15573	2.18396	4.27463	5.32811	4.07003	2.65668	4.13218	3.62086	10.8121	8.93572	3.3138	4.96899	2.51316	2.42183	27.091	37.7324	0.634317	0.776178	8.0416	6.87037	4.37729	4.09445	0.425523	0.286837	3.15909	4.90728
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR003582ShKT_dom
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
Blast
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BLAST of TCONS_00064692 vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 1.926e-20
Identity = 58/159 (36.48%), Postives = 81/159 (50.94%), Query Frame = 3 
Query:  588 ISLSKKRDIMKACLDAHNAKRRLHQHTPSMIYSQKLADRAQTYAEYLRDTDKFDHDDFRGYGFDKSIGENLYWSSSRIRTPEDAVASWYNEIKNYNFRTSASNGGVIGHFTQLVWQRSNILGCGVATSSKG-TWIVARYEPAGNT--RGAYKANVHPLK 1055
            +  S  +      L AHN  R+ H   P +   + L   AQ Y+E L  T    H      G     GENL W+S   +T ++    WY+EIKNYNF+      G  GHFT +VW+ +  +G G A++S G +++VARY PAGN    G ++ NV P K
Sbjct:    1 MGKSASKQFHNEVLKAHNEYRQKHG-VPPLKLCKNLNREAQQYSEALASTRILKHSPESSRG---QCGENLAWASYD-QTGKEVADRWYSEIKNYNFQQPGFTSGT-GHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLPPK 153
The following BLAST results are available for this feature:
BLAST of TCONS_00064692 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR11.926e-2036.48Golgi-associated plant pathogenesis-related protei... [more]
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