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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064689 ID=TCONS_00064689|Name=TCONS_00064689|organism=Clytia hemisphaerica|type=transcript|length=1112bp
tttcttctttaggcTGAAGCTTTCGTTAAGAGATATAATTTACAAAAAGA
CATTGCTGTCCTTCGTAACATCGAGGCCATCAAATATAGCATGGAGCTTA
TGAAAGAAAAAGATTCAGTTGAAAAATGGCTGAAAGAAAGACATCATTTA
GAATGTTAGAACATCTTCATCACATACACAGAGAGAGATATTGTTATTTA
TGGGGCATAGTTAGTTTACTGCTACTGAGTTGTGGATGCAACGAGCTACG
CGACACAATATTTCAATTCTACGGCTATCGATCATTTCCTGTCTGACAAA
ACTGTCATTGGGCTAGACAAGTGTCAACCAACTTCAATTTTTTAATACTT
GGTTCATATGTCGGCTGTTTGATGTGTTCTTTATCAAATGAATGTTGCTC
TTTTTTGAACTCTCATTTGAAaatccattttcattgaaagctAGTTCGTT
AGATCATCTCGATAGCTAAACCCAAACGTTATCGGCTAACGAGGGCTTTT
AAAACACTATTCCAAGCGTTACCATAAACTCCCCAAAAATGTGGTCTTCG
GTTGCTAGAacgttttaagtttttcttttcttttaagatTATTCTTTCAg
cgtttatttttattttcaccatcttTTCAATTTCCATTTTCTTCCAAGCT
TCATCGACgttagtttattttttttagaagaattttttagaaggataaaa
tatttttgctatctttatttttcaaacttttgtaaaatattattttttca
aaataatgaaattctATTATGGTGAGAAAACCAAATGTTTTGACTTAGAC
TTTTTTTCTCATGTCTATCCTGGGGCAGAAGTATATAAACCATCGTGCCA
TGCCATCCTTTTTTATTACtgtattttttctacttttttttggaaaaatt
tcagaaaattctaaATCAACtggaaaattaaattcaaacaaAAGTTGCGA
GTTTGAGCTAAAGTTGCGAACTTGAGCTAAGGTTGCGAGTCTGATGAGCT
GAAACCACCGGCTcgattgaaaataattgaaaaagtgAAGATACATGTTA
TGTTGAAGGCCAACGTTTACTTAAAATGTGTGTTTATTtacattttatga
cttttataTTGC Run BLAST on NCBI transcript from alignment at scaffold_420:315160..316271 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064689 ID=TCONS_00064689|Name=TCONS_00064689|organism=Clytia hemisphaerica|type=transcript|length=1112bp|location=Sequence derived from alignment at scaffold_420:315160..316271 (Clytia hemisphaerica)
GCAAtataaaagtcataaaatgtaAATAAACACACATTTTAAGTAAACGT
TGGCCTTCAACATAACATGTATCTTcactttttcaattattttcaatcgA
GCCGGTGGTTTCAGCTCATCAGACTCGCAACCTTAGCTCAAGTTCGCAAC
TTTAGCTCAAACTCGCAACTTttgtttgaatttaattttccaGTTGATtt
agaattttctgaaatttttccaaaaaaaagtagaaaaaatacaGTAATAA
AAAAGGATGGCATGGCACGATGGTTTATATACTTCTGCCCCAGGATAGAC
ATGAGAAAAAAAGTCTAAGTCAAAACATTTGGTTTTCTCACCATAATaga
atttcattattttgaaaaaataatattttacaaaagtttgaaaaataaag
atagcaaaaatattttatccttctaaaaaattcttctaaaaaaaataaac
taacGTCGATGAAGCTTGGAAGAAAATGGAAATTGAAaagatggtgaaaa
taaaaataaacgcTGAAAGAATAatcttaaaagaaaagaaaaacttaaaa
cgtTCTAGCAACCGAAGACCACATTTTTGGGGAGTTTATGGTAACGCTTG
GAATAGTGTTTTAAAAGCCCTCGTTAGCCGATAACGTTTGGGTTTAGCTA
TCGAGATGATCTAACGAACTagctttcaatgaaaatggattTTCAAATGA
GAGTTCAAAAAAGAGCAACATTCATTTGATAAAGAACACATCAAACAGCC
GACATATGAACCAAGTATTAAAAAATTGAAGTTGGTTGACACTTGTCTAG
CCCAATGACAGTTTTGTCAGACAGGAAATGATCGATAGCCGTAGAATTGA
AATATTGTGTCGCGTAGCTCGTTGCATCCACAACTCAGTAGCAGTAAACT
AACTATGCCCCATAAATAACAATATCTCTCTCTGTGTATGTGATGAAGAT
GTTCTAACATTCTAAATGATGTCTTTCTTTCAGCCATTTTTCAACTGAAT
CTTTTTCTTTCATAAGCTCCATGCTATATTTGATGGCCTCGATGTTACGA
AGGACAGCAATGTCTTTTTGTAAATTATATCTCTTAACGAAAGCTTCAgc
ctaaagaagaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064689-exon-scaffold_420-1491911889:315160..316271 | TCONS_00064689-exon-scaffold_420-1491911889:315160..316271 | Clytia hemisphaerica | exon |
| TCONS_00064689-exon-scaffold_420-1510915933:315160..316271 | TCONS_00064689-exon-scaffold_420-1510915933:315160..316271 | Clytia hemisphaerica | exon |
| TCONS_00064689-exon-scaffold_420-1575043694:315160..316271 | TCONS_00064689-exon-scaffold_420-1575043694:315160..316271 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_420 | supercontig | scaffold_420:315160..316271 . |
Blast
The following BLAST results are available for this feature:
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