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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064688 ID=TCONS_00064688|Name=TCONS_00064688|organism=Clytia hemisphaerica|type=transcript|length=1090bp
ATCCAGTCTGCCaacgtttttcattttcagttacaaaaattacaaagatG
AAAtacttttctaaattttcttatGTACAAAATATTTAACAACAATATTC
TCTTTTTTAAATAACATCAACAATAACATATTAGGTACAAAAGCAGTGTG
TGGAGGTGTATAGGATATGTGGCTCATTGAAGTCCGTTATCTTCGGATAT
CTTCATCCTTTGACTTTATGTGTCCGGGTACTGATTTACCAAAGGGCTTG
AGTGTAGATGATTGAATAATGGGAAGTGTCAACTTCCAGAACACCTCTTT
CATGAACGACAAACTCTTATAAATAGATGTGTGGGTAGCTGTAACATTTC
GGCGGAAAACATTTCGTGTGTCTGCATCATGTTCTTTGTTCGACAGTGTC
TGagtcaaaaaaaactttctttaatgTCATAATTTGTTGAATAATTTGAT
TCAACCCACTCTATCGACCATGAATGATTGATTTTCACCATCAGATTTTC
ACACCAAGCACTTGACAAGTATCTAAACGTGTCGGCAGCAATTCTCCTGG
GAAATTTTTACTGTAACATCCGATTCCATCGATGTACTTTTCGCACCCAA
CAATTTTTCTGTAGCGAAAAGTTTTCAGGTAAGGATTGGTTAACAGGcag
ccattttgatttttaagttcATTCTCTGAAAACGAAAAAACAGATTCTTT
TGCATAACTTCTTTTGCGCGCTACATCCTTGCATGCGTCGAATCAAGACA
TTTCTTTGTTTACCAGCTTTGCCAGATTCATTGTCGACTGCATTCATGCT
TTGAATGGTTTCTTTGATGCACGTTTGATACATGTGGCTGCATCTACATG
CGCATCTGCACGGTTGGTTGGTGTTGTTATCTCTAAAGTGAAATTGTTTG
TTGATGATGCTTGCTCCACCGCTGAACGATCTACTTTCGGATAATGCCAA
CAAGCAGGTTATGAAGAAAACGATTGCGATAAAGTTGTTCATCTTtgttt
gttgattttgttttttttctgaagatGAAAGAATGAAAACAGATTAATTA
GTTGTACAAAGAGGAAAATTTAATGCAAACTTTGATGAAG Run BLAST on NCBI transcript from alignment at scaffold_420:256856..257945 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064688 ID=TCONS_00064688|Name=TCONS_00064688|organism=Clytia hemisphaerica|type=transcript|length=1090bp|location=Sequence derived from alignment at scaffold_420:256856..257945 (Clytia hemisphaerica)
CTTCATCAAAGTTTGCATTAAATTTTCCTCTTTGTACAACTAATTAATCT
GTTTTCATTCTTTCatcttcagaaaaaaaacaaaatcaacaaacaAAGAT
GAACAACTTTATCGCAATCGTTTTCTTCATAACCTGCTTGTTGGCATTAT
CCGAAAGTAGATCGTTCAGCGGTGGAGCAAGCATCATCAACAAACAATTT
CACTTTAGAGATAACAACACCAACCAACCGTGCAGATGCGCATGTAGATG
CAGCCACATGTATCAAACGTGCATCAAAGAAACCATTCAAAGCATGAATG
CAGTCGACAATGAATCTGGCAAAGCTGGTAAACAAAGAAATGTCTTGATT
CGACGCATGCAAGGATGTAGCGCGCAAAAGAAGTTATGCAAAAGAATCTG
TTTTTTCGTTTTCAGAGAATgaacttaaaaatcaaaatggctgCCTGTTA
ACCAATCCTTACCTGAAAACTTTTCGCTACAGAAAAATTGTTGGGTGCGA
AAAGTACATCGATGGAATCGGATGTTACAGTAAAAATTTCCCAGGAGAAT
TGCTGCCGACACGTTTAGATACTTGTCAAGTGCTTGGTGTGAAAATCTGA
TGGTGAAAATCAATCATTCATGGTCGATAGAGTGGGTTGAATCAAATTAT
TCAACAAATTATGAcattaaagaaagttttttttgactCAGACACTGTCG
AACAAAGAACATGATGCAGACACACGAAATGTTTTCCGCCGAAATGTTAC
AGCTACCCACACATCTATTTATAAGAGTTTGTCGTTCATGAAAGAGGTGT
TCTGGAAGTTGACACTTCCCATTATTCAATCATCTACACTCAAGCCCTTT
GGTAAATCAGTACCCGGACACATAAAGTCAAAGGATGAAGATATCCGAAG
ATAACGGACTTCAATGAGCCACATATCCTATACACCTCCACACACTGCTT
TTGTACCTAATATGTTATTGTTGATGTTATTTAAAAAAGAGAATATTGTT
GTTAAATATTTTGTACataagaaaatttagaaaagtaTTTCatctttgta
atttttgtaactgaaaatgaaaaacgttGGCAGACTGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064688-exon-scaffold_420-1491911889:256856..257945 | TCONS_00064688-exon-scaffold_420-1491911889:256856..257945 | Clytia hemisphaerica | exon |
| TCONS_00064688-exon-scaffold_420-1510915933:256856..257945 | TCONS_00064688-exon-scaffold_420-1510915933:256856..257945 | Clytia hemisphaerica | exon |
| TCONS_00064688-exon-scaffold_420-1575043694:256856..257945 | TCONS_00064688-exon-scaffold_420-1575043694:256856..257945 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_420 | supercontig | scaffold_420:256856..257945 . |
Blast
The following BLAST results are available for this feature:
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