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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064677 ID=TCONS_00064677|Name=TCONS_00064677|organism=Clytia hemisphaerica|type=transcript|length=954bp
AATGGAGCGTTTGTCGTAATCCTCCAGTTCATTGAACAAATTCACGATCT
CAATTTTCTCTGCATTTGATACACTGATCCCTTTGACTTTTATAAGTGCT
TTGGCCAAACGATCAACCTTACACCAACCCGGTATTCCTTTGGAATCAGT
TGCATCATTATCTCCTGCTTCTGTTACATCTTGTTTGTCGTTTTCTTCAT
CCTCCGGAGACGGTGGAAGTTCTTCCGGGATCTCTGCGTCAGAAGAATCG
TCACTTTCCAATCCTGAATCCAAGTAGACTCCATCGTCGATGTTGTTGTC
GATATAATCCTCGTCAAACCGTTGGACACGAACTGCTGACAAGGTTCCTT
CAGCTTGGGCCTTATCAAGTGCATCAACTACGTTTTGGCGAAACAGATAC
TCCATACCAAAGATCTCATCAGATAGTTTGGGTGGGGGACTCTCTTCGTT
GAATCTTTCACCATGCACCTCAAGGTGGAGCAGATTGAACTTTTCAACCA
ACTTGGAGTCAAAGCAACGCATCTCATCCTTAGTTCCATCGATAGCATTT
CTTCTCAAGGTGTTCCACCGAGCAAGTCCATCGAGGAGATATGCTTGAAA
GTTGACAGCATTGGCACTAGTGCCTGGTATGAAGTTGTGTAGATGGTGGT
GGAAAGACTCTAGCGAAGTGCTGCCGCGGGCGCAACGGTAGACTGGCAGC
TTGACACCTCCCTTCTCTGGTGACCCTGTCTGTGTGTAGAGTTGGAAGCC
ATCAGGATCTTGGATGCACTTCACGTGACGCCTCTGGTCTTCCCAGACAT
CGACGATGGTTGCTTTGAACAAAGGGACACTCAGAGAGTGAGTGGCACCA
GTCATGGAAAGGATCAGGTTCTCTATCATCTCGATTGTTTTTTCTGCACC
CCGAGTTCGTCGTTTACAATGCCGTGCCATTTCTCCTGAGTTGATTGCTT
TCTT Run BLAST on NCBI protein sequence of TCONS_00064677-protein >TCONS_00064677-protein ID=TCONS_00064677-protein|Name=TCONS_00064677-protein|organism=Clytia hemisphaerica|type=polypeptide|length=318bp
KKAINSGEMARHCKRRTRGAEKTIEMIENLILSMTGATHSLSVPLFKATI
VDVWEDQRRHVKCIQDPDGFQLYTQTGSPEKGGVKLPVYRCARGSTSLES
FHHHLHNFIPGTSANAVNFQAYLLDGLARWNTLRRNAIDGTKDEMRCFDS
KLVEKFNLLHLEVHGERFNEESPPPKLSDEIFGMEYLFRQNVVDALDKAQ
AEGTLSAVRVQRFDEDYIDNNIDDGVYLDSGLESDDSSDAEIPEELPPSP
EDEENDKQDVTEAGDNDATDSKGIPGWCKVDRLAKALIKVKGISVSNAEK
IEIVNLFNELEDYDKRSI Run BLAST on NCBI transcript from alignment at scaffold_420:82879..83832 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064677 ID=TCONS_00064677|Name=TCONS_00064677|organism=Clytia hemisphaerica|type=transcript|length=954bp|location=Sequence derived from alignment at scaffold_420:82879..83832 (Clytia hemisphaerica)
AAGAAAGCAATCAACTCAGGAGAAATGGCACGGCATTGTAAACGACGAAC
TCGGGGTGCAGAAAAAACAATCGAGATGATAGAGAACCTGATCCTTTCCA
TGACTGGTGCCACTCACTCTCTGAGTGTCCCTTTGTTCAAAGCAACCATC
GTCGATGTCTGGGAAGACCAGAGGCGTCACGTGAAGTGCATCCAAGATCC
TGATGGCTTCCAACTCTACACACAGACAGGGTCACCAGAGAAGGGAGGTG
TCAAGCTGCCAGTCTACCGTTGCGCCCGCGGCAGCACTTCGCTAGAGTCT
TTCCACCACCATCTACACAACTTCATACCAGGCACTAGTGCCAATGCTGT
CAACTTTCAAGCATATCTCCTCGATGGACTTGCTCGGTGGAACACCTTGA
GAAGAAATGCTATCGATGGAACTAAGGATGAGATGCGTTGCTTTGACTCC
AAGTTGGTTGAAAAGTTCAATCTGCTCCACCTTGAGGTGCATGGTGAAAG
ATTCAACGAAGAGAGTCCCCCACCCAAACTATCTGATGAGATCTTTGGTA
TGGAGTATCTGTTTCGCCAAAACGTAGTTGATGCACTTGATAAGGCCCAA
GCTGAAGGAACCTTGTCAGCAGTTCGTGTCCAACGGTTTGACGAGGATTA
TATCGACAACAACATCGACGATGGAGTCTACTTGGATTCAGGATTGGAAA
GTGACGATTCTTCTGACGCAGAGATCCCGGAAGAACTTCCACCGTCTCCG
GAGGATGAAGAAAACGACAAACAAGATGTAACAGAAGCAGGAGATAATGA
TGCAACTGATTCCAAAGGAATACCGGGTTGGTGTAAGGTTGATCGTTTGG
CCAAAGCACTTATAAAAGTCAAAGGGATCAGTGTATCAAATGCAGAGAAA
ATTGAGATCGTGAATTTGTTCAATGAACTGGAGGATTACGACAAACGCTC
CATT Coding sequence (CDS) from alignment at scaffold_420:82879..83832 >TCONS_00064677 ID=TCONS_00064677|Name=TCONS_00064677|organism=Clytia hemisphaerica|type=CDS|length=954bp|location=Sequence derived from alignment at scaffold_420:82879..83832 (Clytia hemisphaerica)
AAGAAAGCAATCAACTCAGGAGAAATGGCACGGCATTGTAAACGACGAAC
TCGGGGTGCAGAAAAAACAATCGAGATGATAGAGAACCTGATCCTTTCCA
TGACTGGTGCCACTCACTCTCTGAGTGTCCCTTTGTTCAAAGCAACCATC
GTCGATGTCTGGGAAGACCAGAGGCGTCACGTGAAGTGCATCCAAGATCC
TGATGGCTTCCAACTCTACACACAGACAGGGTCACCAGAGAAGGGAGGTG
TCAAGCTGCCAGTCTACCGTTGCGCCCGCGGCAGCACTTCGCTAGAGTCT
TTCCACCACCATCTACACAACTTCATACCAGGCACTAGTGCCAATGCTGT
CAACTTTCAAGCATATCTCCTCGATGGACTTGCTCGGTGGAACACCTTGA
GAAGAAATGCTATCGATGGAACTAAGGATGAGATGCGTTGCTTTGACTCC
AAGTTGGTTGAAAAGTTCAATCTGCTCCACCTTGAGGTGCATGGTGAAAG
ATTCAACGAAGAGAGTCCCCCACCCAAACTATCTGATGAGATCTTTGGTA
TGGAGTATCTGTTTCGCCAAAACGTAGTTGATGCACTTGATAAGGCCCAA
GCTGAAGGAACCTTGTCAGCAGTTCGTGTCCAACGGTTTGACGAGGATTA
TATCGACAACAACATCGACGATGGAGTCTACTTGGATTCAGGATTGGAAA
GTGACGATTCTTCTGACGCAGAGATCCCGGAAGAACTTCCACCGTCTCCG
GAGGATGAAGAAAACGACAAACAAGATGTAACAGAAGCAGGAGATAATGA
TGCAACTGATTCCAAAGGAATACCGGGTTGGTGTAAGGTTGATCGTTTGG
CCAAAGCACTTATAAAAGTCAAAGGGATCAGTGTATCAAATGCAGAGAAA
ATTGAGATCGTGAATTTGTTCAATGAACTGGAGGATTACGACAAACGCTC
CATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064677-exon-scaffold_420-1491911889:82879..83832 | TCONS_00064677-exon-scaffold_420-1491911889:82879..83832 | Clytia hemisphaerica | exon |
| TCONS_00064677-exon-scaffold_420-1510915933:82879..83832 | TCONS_00064677-exon-scaffold_420-1510915933:82879..83832 | Clytia hemisphaerica | exon |
| TCONS_00064677-exon-scaffold_420-1575043694:82879..83832 | TCONS_00064677-exon-scaffold_420-1575043694:82879..83832 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_420 | supercontig | scaffold_420:82879..83832 . |
Blast
The following BLAST results are available for this feature:
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